HEADER LYASE/LYASE INHIBITOR 30-NOV-15 5F1U TITLE BIOMIMETIC DESIGN RESULTS IN A POTENT ALLOSTERIC INHIBITOR OF TITLE 2 DIHYDRODIPICOLINATE SYNTHASE FROM CAMPYLOBACTER JEJUNI COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4-HYDROXY-TETRAHYDRODIPICOLINATE SYNTHASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: HTPA SYNTHASE; COMPND 5 EC: 4.3.3.7; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI; SOURCE 3 ORGANISM_TAXID: 197; SOURCE 4 GENE: DAPA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: XL1-BLUE; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE-80L KEYWDS SCHIFF-BASE, ALDOLASE, TIM BARREL, LYASE-LYASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.J.T.CONLY,D.R.J.PALMER,D.A.R.SANDERS REVDAT 4 27-SEP-23 5F1U 1 REMARK REVDAT 3 27-SEP-17 5F1U 1 REMARK REVDAT 2 24-FEB-16 5F1U 1 JRNL REVDAT 1 17-FEB-16 5F1U 0 JRNL AUTH Y.V.SKOVPEN,C.J.CONLY,D.A.SANDERS,D.R.PALMER JRNL TITL BIOMIMETIC DESIGN RESULTS IN A POTENT ALLOSTERIC INHIBITOR JRNL TITL 2 OF DIHYDRODIPICOLINATE SYNTHASE FROM CAMPYLOBACTER JEJUNI. JRNL REF J.AM.CHEM.SOC. V. 138 2014 2016 JRNL REFN ESSN 1520-5126 JRNL PMID 26836694 JRNL DOI 10.1021/JACS.5B12695 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 47679 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2384 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.4002 - 6.0388 1.00 2854 151 0.1535 0.1834 REMARK 3 2 6.0388 - 4.7945 1.00 2744 144 0.1630 0.2194 REMARK 3 3 4.7945 - 4.1889 1.00 2686 141 0.1439 0.1836 REMARK 3 4 4.1889 - 3.8060 1.00 2685 142 0.1541 0.2003 REMARK 3 5 3.8060 - 3.5333 1.00 2676 141 0.1659 0.2335 REMARK 3 6 3.5333 - 3.3251 1.00 2640 139 0.1812 0.2442 REMARK 3 7 3.3251 - 3.1586 1.00 2684 141 0.1800 0.2830 REMARK 3 8 3.1586 - 3.0211 1.00 2654 140 0.1755 0.2292 REMARK 3 9 3.0211 - 2.9048 1.00 2642 139 0.1787 0.2395 REMARK 3 10 2.9048 - 2.8046 1.00 2646 139 0.1868 0.2503 REMARK 3 11 2.8046 - 2.7169 1.00 2616 138 0.1788 0.2572 REMARK 3 12 2.7169 - 2.6392 1.00 2641 139 0.1875 0.2660 REMARK 3 13 2.6392 - 2.5698 1.00 2629 138 0.1787 0.2806 REMARK 3 14 2.5698 - 2.5071 1.00 2638 139 0.1996 0.2473 REMARK 3 15 2.5071 - 2.4501 1.00 2631 137 0.1928 0.2552 REMARK 3 16 2.4501 - 2.3979 1.00 2618 138 0.2133 0.2764 REMARK 3 17 2.3979 - 2.3500 1.00 2611 138 0.2149 0.2961 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.33 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 9348 REMARK 3 ANGLE : 0.834 12609 REMARK 3 CHIRALITY : 0.032 1458 REMARK 3 PLANARITY : 0.004 1607 REMARK 3 DIHEDRAL : 14.456 3517 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -6.4510 3.4065 54.4349 REMARK 3 T TENSOR REMARK 3 T11: 0.1490 T22: 0.1338 REMARK 3 T33: 0.1388 T12: 0.0120 REMARK 3 T13: 0.0160 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.1405 L22: 0.2904 REMARK 3 L33: 0.2606 L12: 0.0538 REMARK 3 L13: -0.0281 L23: -0.0217 REMARK 3 S TENSOR REMARK 3 S11: -0.0017 S12: 0.0064 S13: 0.0261 REMARK 3 S21: 0.0915 S22: -0.0023 S23: 0.0182 REMARK 3 S31: -0.0010 S32: -0.0052 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5F1U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000215854. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : KOHZU DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47688 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.220 REMARK 200 R MERGE (I) : 0.16700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.7100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.95200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.560 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3LER REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 0.28 M NAACT, 0.1 MM REMARK 280 TRIS, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.79500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.99000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.39000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.99000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.79500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.39000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP B 2 REMARK 465 LYS B 3 REMARK 465 ASP C 2 REMARK 465 ASP D 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 253 C - N - CD ANGL. DEV. = 17.5 DEGREES REMARK 500 PRO C 253 C - N - CD ANGL. DEV. = 18.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 111 -47.73 87.38 REMARK 500 GLN A 128 48.45 -90.74 REMARK 500 SER A 129 -15.51 -151.16 REMARK 500 TYR B 111 -50.05 70.62 REMARK 500 VAL C 45 75.02 36.55 REMARK 500 TYR C 111 -49.29 71.59 REMARK 500 ASN C 171 80.14 -153.51 REMARK 500 VAL D 45 74.57 42.89 REMARK 500 TYR D 111 -48.76 74.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 AUTHORS STATE THAT IN LIGAND 3VN, CARBONYL GROUPS ARE DE-PROTONATED, REMARK 600 AND AMINE GROUPS ARE PROTONATED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3VN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3VN D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5F1V RELATED DB: PDB DBREF 5F1U A 2 298 UNP Q9PPB4 DAPA_CAMJE 2 298 DBREF 5F1U B 2 298 UNP Q9PPB4 DAPA_CAMJE 2 298 DBREF 5F1U C 2 298 UNP Q9PPB4 DAPA_CAMJE 2 298 DBREF 5F1U D 2 298 UNP Q9PPB4 DAPA_CAMJE 2 298 SEQADV 5F1U PHE A 110 UNP Q9PPB4 TYR 110 ENGINEERED MUTATION SEQADV 5F1U PHE B 110 UNP Q9PPB4 TYR 110 ENGINEERED MUTATION SEQADV 5F1U PHE C 110 UNP Q9PPB4 TYR 110 ENGINEERED MUTATION SEQADV 5F1U PHE D 110 UNP Q9PPB4 TYR 110 ENGINEERED MUTATION SEQRES 1 A 297 ASP LYS ASN ILE ILE ILE GLY ALA MET THR ALA LEU ILE SEQRES 2 A 297 THR PRO PHE LYS ASN GLY LYS VAL ASP GLU GLN SER TYR SEQRES 3 A 297 ALA ARG LEU ILE LYS ARG GLN ILE GLU ASN GLY ILE ASP SEQRES 4 A 297 ALA VAL VAL PRO VAL GLY THR THR GLY GLU SER ALA THR SEQRES 5 A 297 LEU THR HIS GLU GLU HIS ARG THR CYS ILE GLU ILE ALA SEQRES 6 A 297 VAL GLU THR CYS LYS GLY THR LYS VAL LYS VAL LEU ALA SEQRES 7 A 297 GLY ALA GLY SER ASN ALA THR HIS GLU ALA VAL GLY LEU SEQRES 8 A 297 ALA LYS PHE ALA LYS GLU HIS GLY ALA ASP GLY ILE LEU SEQRES 9 A 297 SER VAL ALA PRO PHE TYR ASN LYS PRO THR GLN GLN GLY SEQRES 10 A 297 LEU TYR GLU HIS TYR LYS ALA ILE ALA GLN SER VAL ASP SEQRES 11 A 297 ILE PRO VAL LEU LEU TYR ASN VAL PRO GLY ARG THR GLY SEQRES 12 A 297 CYS GLU ILE SER THR ASP THR ILE ILE LYS LEU PHE ARG SEQRES 13 A 297 ASP CYS GLU ASN ILE TYR GLY VAL LYS GLU ALA SER GLY SEQRES 14 A 297 ASN ILE ASP LYS CYS VAL ASP LEU LEU ALA HIS GLU PRO SEQRES 15 A 297 ARG MET MET LEU ILE SER GLY GLU ASP ALA ILE ASN TYR SEQRES 16 A 297 PRO ILE LEU SER ASN GLY GLY LYS GLY VAL ILE SER VAL SEQRES 17 A 297 THR SER ASN LEU LEU PRO ASP MET ILE SER ALA LEU THR SEQRES 18 A 297 HIS PHE ALA LEU ASP GLU ASN TYR LYS GLU ALA LYS LYS SEQRES 19 A 297 ILE ASN ASP GLU LEU TYR ASN ILE ASN LYS ILE LEU PHE SEQRES 20 A 297 CYS GLU SER ASN PRO ILE PRO ILE LYS THR ALA MET TYR SEQRES 21 A 297 LEU ALA GLY LEU ILE GLU SER LEU GLU PHE ARG LEU PRO SEQRES 22 A 297 LEU CYS SER PRO SER LYS GLU ASN PHE ALA LYS ILE GLU SEQRES 23 A 297 GLU VAL MET LYS LYS TYR LYS ILE LYS GLY PHE SEQRES 1 B 297 ASP LYS ASN ILE ILE ILE GLY ALA MET THR ALA LEU ILE SEQRES 2 B 297 THR PRO PHE LYS ASN GLY LYS VAL ASP GLU GLN SER TYR SEQRES 3 B 297 ALA ARG LEU ILE LYS ARG GLN ILE GLU ASN GLY ILE ASP SEQRES 4 B 297 ALA VAL VAL PRO VAL GLY THR THR GLY GLU SER ALA THR SEQRES 5 B 297 LEU THR HIS GLU GLU HIS ARG THR CYS ILE GLU ILE ALA SEQRES 6 B 297 VAL GLU THR CYS LYS GLY THR LYS VAL LYS VAL LEU ALA SEQRES 7 B 297 GLY ALA GLY SER ASN ALA THR HIS GLU ALA VAL GLY LEU SEQRES 8 B 297 ALA LYS PHE ALA LYS GLU HIS GLY ALA ASP GLY ILE LEU SEQRES 9 B 297 SER VAL ALA PRO PHE TYR ASN LYS PRO THR GLN GLN GLY SEQRES 10 B 297 LEU TYR GLU HIS TYR LYS ALA ILE ALA GLN SER VAL ASP SEQRES 11 B 297 ILE PRO VAL LEU LEU TYR ASN VAL PRO GLY ARG THR GLY SEQRES 12 B 297 CYS GLU ILE SER THR ASP THR ILE ILE LYS LEU PHE ARG SEQRES 13 B 297 ASP CYS GLU ASN ILE TYR GLY VAL LYS GLU ALA SER GLY SEQRES 14 B 297 ASN ILE ASP LYS CYS VAL ASP LEU LEU ALA HIS GLU PRO SEQRES 15 B 297 ARG MET MET LEU ILE SER GLY GLU ASP ALA ILE ASN TYR SEQRES 16 B 297 PRO ILE LEU SER ASN GLY GLY LYS GLY VAL ILE SER VAL SEQRES 17 B 297 THR SER ASN LEU LEU PRO ASP MET ILE SER ALA LEU THR SEQRES 18 B 297 HIS PHE ALA LEU ASP GLU ASN TYR LYS GLU ALA LYS LYS SEQRES 19 B 297 ILE ASN ASP GLU LEU TYR ASN ILE ASN LYS ILE LEU PHE SEQRES 20 B 297 CYS GLU SER ASN PRO ILE PRO ILE LYS THR ALA MET TYR SEQRES 21 B 297 LEU ALA GLY LEU ILE GLU SER LEU GLU PHE ARG LEU PRO SEQRES 22 B 297 LEU CYS SER PRO SER LYS GLU ASN PHE ALA LYS ILE GLU SEQRES 23 B 297 GLU VAL MET LYS LYS TYR LYS ILE LYS GLY PHE SEQRES 1 C 297 ASP LYS ASN ILE ILE ILE GLY ALA MET THR ALA LEU ILE SEQRES 2 C 297 THR PRO PHE LYS ASN GLY LYS VAL ASP GLU GLN SER TYR SEQRES 3 C 297 ALA ARG LEU ILE LYS ARG GLN ILE GLU ASN GLY ILE ASP SEQRES 4 C 297 ALA VAL VAL PRO VAL GLY THR THR GLY GLU SER ALA THR SEQRES 5 C 297 LEU THR HIS GLU GLU HIS ARG THR CYS ILE GLU ILE ALA SEQRES 6 C 297 VAL GLU THR CYS LYS GLY THR LYS VAL LYS VAL LEU ALA SEQRES 7 C 297 GLY ALA GLY SER ASN ALA THR HIS GLU ALA VAL GLY LEU SEQRES 8 C 297 ALA LYS PHE ALA LYS GLU HIS GLY ALA ASP GLY ILE LEU SEQRES 9 C 297 SER VAL ALA PRO PHE TYR ASN LYS PRO THR GLN GLN GLY SEQRES 10 C 297 LEU TYR GLU HIS TYR LYS ALA ILE ALA GLN SER VAL ASP SEQRES 11 C 297 ILE PRO VAL LEU LEU TYR ASN VAL PRO GLY ARG THR GLY SEQRES 12 C 297 CYS GLU ILE SER THR ASP THR ILE ILE LYS LEU PHE ARG SEQRES 13 C 297 ASP CYS GLU ASN ILE TYR GLY VAL LYS GLU ALA SER GLY SEQRES 14 C 297 ASN ILE ASP LYS CYS VAL ASP LEU LEU ALA HIS GLU PRO SEQRES 15 C 297 ARG MET MET LEU ILE SER GLY GLU ASP ALA ILE ASN TYR SEQRES 16 C 297 PRO ILE LEU SER ASN GLY GLY LYS GLY VAL ILE SER VAL SEQRES 17 C 297 THR SER ASN LEU LEU PRO ASP MET ILE SER ALA LEU THR SEQRES 18 C 297 HIS PHE ALA LEU ASP GLU ASN TYR LYS GLU ALA LYS LYS SEQRES 19 C 297 ILE ASN ASP GLU LEU TYR ASN ILE ASN LYS ILE LEU PHE SEQRES 20 C 297 CYS GLU SER ASN PRO ILE PRO ILE LYS THR ALA MET TYR SEQRES 21 C 297 LEU ALA GLY LEU ILE GLU SER LEU GLU PHE ARG LEU PRO SEQRES 22 C 297 LEU CYS SER PRO SER LYS GLU ASN PHE ALA LYS ILE GLU SEQRES 23 C 297 GLU VAL MET LYS LYS TYR LYS ILE LYS GLY PHE SEQRES 1 D 297 ASP LYS ASN ILE ILE ILE GLY ALA MET THR ALA LEU ILE SEQRES 2 D 297 THR PRO PHE LYS ASN GLY LYS VAL ASP GLU GLN SER TYR SEQRES 3 D 297 ALA ARG LEU ILE LYS ARG GLN ILE GLU ASN GLY ILE ASP SEQRES 4 D 297 ALA VAL VAL PRO VAL GLY THR THR GLY GLU SER ALA THR SEQRES 5 D 297 LEU THR HIS GLU GLU HIS ARG THR CYS ILE GLU ILE ALA SEQRES 6 D 297 VAL GLU THR CYS LYS GLY THR LYS VAL LYS VAL LEU ALA SEQRES 7 D 297 GLY ALA GLY SER ASN ALA THR HIS GLU ALA VAL GLY LEU SEQRES 8 D 297 ALA LYS PHE ALA LYS GLU HIS GLY ALA ASP GLY ILE LEU SEQRES 9 D 297 SER VAL ALA PRO PHE TYR ASN LYS PRO THR GLN GLN GLY SEQRES 10 D 297 LEU TYR GLU HIS TYR LYS ALA ILE ALA GLN SER VAL ASP SEQRES 11 D 297 ILE PRO VAL LEU LEU TYR ASN VAL PRO GLY ARG THR GLY SEQRES 12 D 297 CYS GLU ILE SER THR ASP THR ILE ILE LYS LEU PHE ARG SEQRES 13 D 297 ASP CYS GLU ASN ILE TYR GLY VAL LYS GLU ALA SER GLY SEQRES 14 D 297 ASN ILE ASP LYS CYS VAL ASP LEU LEU ALA HIS GLU PRO SEQRES 15 D 297 ARG MET MET LEU ILE SER GLY GLU ASP ALA ILE ASN TYR SEQRES 16 D 297 PRO ILE LEU SER ASN GLY GLY LYS GLY VAL ILE SER VAL SEQRES 17 D 297 THR SER ASN LEU LEU PRO ASP MET ILE SER ALA LEU THR SEQRES 18 D 297 HIS PHE ALA LEU ASP GLU ASN TYR LYS GLU ALA LYS LYS SEQRES 19 D 297 ILE ASN ASP GLU LEU TYR ASN ILE ASN LYS ILE LEU PHE SEQRES 20 D 297 CYS GLU SER ASN PRO ILE PRO ILE LYS THR ALA MET TYR SEQRES 21 D 297 LEU ALA GLY LEU ILE GLU SER LEU GLU PHE ARG LEU PRO SEQRES 22 D 297 LEU CYS SER PRO SER LYS GLU ASN PHE ALA LYS ILE GLU SEQRES 23 D 297 GLU VAL MET LYS LYS TYR LYS ILE LYS GLY PHE HET 3VN A 301 22 HET PG4 A 302 13 HET EDO A 303 4 HET EDO A 304 4 HET EDO A 305 4 HET CL B 301 1 HET PGE B 302 10 HET EDO B 303 4 HET EDO B 304 4 HET EDO B 305 4 HET EDO C 301 4 HET EDO C 302 4 HET 3VN D 301 22 HET EDO D 302 4 HET EDO D 303 4 HETNAM 3VN (2R,5R)-2,5-DIAMINO-2,5-BIS(4-AMINOBUTYL)HEXANEDIOIC HETNAM 2 3VN ACID HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETNAM PGE TRIETHYLENE GLYCOL HETSYN 3VN BIS-LYSINE HETSYN EDO ETHYLENE GLYCOL FORMUL 5 3VN 2(C14 H30 N4 O4) FORMUL 6 PG4 C8 H18 O5 FORMUL 7 EDO 10(C2 H6 O2) FORMUL 10 CL CL 1- FORMUL 11 PGE C6 H14 O4 FORMUL 20 HOH *302(H2 O) HELIX 1 AA1 ASP A 23 ASN A 37 1 15 HELIX 2 AA2 THR A 55 LYS A 71 1 17 HELIX 3 AA3 ALA A 85 HIS A 99 1 15 HELIX 4 AA4 THR A 115 GLN A 128 1 14 HELIX 5 AA5 VAL A 139 GLY A 144 1 6 HELIX 6 AA6 SER A 148 CYS A 159 1 12 HELIX 7 AA7 ASN A 171 GLU A 182 1 12 HELIX 8 AA8 GLU A 191 ALA A 193 5 3 HELIX 9 AA9 ILE A 194 ASN A 201 1 8 HELIX 10 AB1 VAL A 209 LEU A 213 5 5 HELIX 11 AB2 LEU A 214 ASP A 227 1 14 HELIX 12 AB3 ASN A 229 LEU A 240 1 12 HELIX 13 AB4 LEU A 240 LEU A 247 1 8 HELIX 14 AB5 PRO A 253 ALA A 263 1 11 HELIX 15 AB6 SER A 279 LYS A 291 1 13 HELIX 16 AB7 ASP B 23 GLU B 36 1 14 HELIX 17 AB8 THR B 55 LYS B 71 1 17 HELIX 18 AB9 ALA B 85 HIS B 99 1 15 HELIX 19 AC1 THR B 115 GLN B 128 1 14 HELIX 20 AC2 VAL B 139 GLY B 144 1 6 HELIX 21 AC3 SER B 148 CYS B 159 1 12 HELIX 22 AC4 ASN B 171 GLU B 182 1 12 HELIX 23 AC5 GLU B 191 ALA B 193 5 3 HELIX 24 AC6 ILE B 194 ASN B 201 1 8 HELIX 25 AC7 VAL B 209 LEU B 213 5 5 HELIX 26 AC8 LEU B 214 ASP B 227 1 14 HELIX 27 AC9 ASN B 229 LEU B 247 1 19 HELIX 28 AD1 PRO B 253 ALA B 263 1 11 HELIX 29 AD2 SER B 279 MET B 290 1 12 HELIX 30 AD3 LYS B 291 TYR B 293 5 3 HELIX 31 AD4 ASP C 23 ASN C 37 1 15 HELIX 32 AD5 THR C 55 LYS C 71 1 17 HELIX 33 AD6 ALA C 85 HIS C 99 1 15 HELIX 34 AD7 THR C 115 GLN C 128 1 14 HELIX 35 AD8 VAL C 139 GLY C 144 1 6 HELIX 36 AD9 SER C 148 CYS C 159 1 12 HELIX 37 AE1 ASN C 171 GLU C 182 1 12 HELIX 38 AE2 GLU C 191 ALA C 193 5 3 HELIX 39 AE3 ILE C 194 ASN C 201 1 8 HELIX 40 AE4 VAL C 209 LEU C 213 5 5 HELIX 41 AE5 LEU C 214 ASP C 227 1 14 HELIX 42 AE6 ASN C 229 LEU C 240 1 12 HELIX 43 AE7 LEU C 240 LEU C 247 1 8 HELIX 44 AE8 PRO C 253 ALA C 263 1 11 HELIX 45 AE9 SER C 279 MET C 290 1 12 HELIX 46 AF1 LYS C 291 TYR C 293 5 3 HELIX 47 AF2 ASP D 23 GLU D 36 1 14 HELIX 48 AF3 THR D 55 LYS D 71 1 17 HELIX 49 AF4 ALA D 85 HIS D 99 1 15 HELIX 50 AF5 THR D 115 VAL D 130 1 16 HELIX 51 AF6 VAL D 139 GLY D 144 1 6 HELIX 52 AF7 SER D 148 CYS D 159 1 12 HELIX 53 AF8 ASN D 171 GLU D 182 1 12 HELIX 54 AF9 GLU D 191 ALA D 193 5 3 HELIX 55 AG1 ILE D 194 ASN D 201 1 8 HELIX 56 AG2 VAL D 209 LEU D 213 5 5 HELIX 57 AG3 LEU D 214 ASP D 227 1 14 HELIX 58 AG4 ASN D 229 LEU D 240 1 12 HELIX 59 AG5 LEU D 240 LEU D 247 1 8 HELIX 60 AG6 PRO D 253 ALA D 263 1 11 HELIX 61 AG7 SER D 279 MET D 290 1 12 HELIX 62 AG8 LYS D 291 TYR D 293 5 3 SHEET 1 AA1 9 GLY A 8 ALA A 12 0 SHEET 2 AA1 9 ALA A 41 VAL A 43 1 O VAL A 43 N THR A 11 SHEET 3 AA1 9 LYS A 76 GLY A 80 1 O LYS A 76 N VAL A 42 SHEET 4 AA1 9 GLY A 103 VAL A 107 1 O LEU A 105 N ALA A 79 SHEET 5 AA1 9 VAL A 134 ASN A 138 1 O LEU A 135 N ILE A 104 SHEET 6 AA1 9 ILE A 162 GLU A 167 1 O LYS A 166 N LEU A 136 SHEET 7 AA1 9 MET A 186 SER A 189 1 O MET A 186 N TYR A 163 SHEET 8 AA1 9 GLY A 205 SER A 208 1 O ILE A 207 N SER A 189 SHEET 9 AA1 9 GLY A 8 ALA A 12 1 N MET A 10 O SER A 208 SHEET 1 AA2 2 PHE A 17 LYS A 18 0 SHEET 2 AA2 2 LYS A 21 VAL A 22 -1 O LYS A 21 N LYS A 18 SHEET 1 AA3 9 GLY B 8 ALA B 12 0 SHEET 2 AA3 9 ALA B 41 VAL B 43 1 O VAL B 43 N THR B 11 SHEET 3 AA3 9 LYS B 76 GLY B 80 1 O LYS B 76 N VAL B 42 SHEET 4 AA3 9 GLY B 103 VAL B 107 1 O LEU B 105 N ALA B 79 SHEET 5 AA3 9 VAL B 134 ASN B 138 1 O LEU B 135 N ILE B 104 SHEET 6 AA3 9 ILE B 162 GLU B 167 1 O LYS B 166 N LEU B 136 SHEET 7 AA3 9 MET B 186 SER B 189 1 O ILE B 188 N VAL B 165 SHEET 8 AA3 9 GLY B 205 SER B 208 1 O ILE B 207 N SER B 189 SHEET 9 AA3 9 GLY B 8 ALA B 12 1 N MET B 10 O SER B 208 SHEET 1 AA4 2 PHE B 17 LYS B 18 0 SHEET 2 AA4 2 LYS B 21 VAL B 22 -1 O LYS B 21 N LYS B 18 SHEET 1 AA5 9 GLY C 8 ALA C 12 0 SHEET 2 AA5 9 ALA C 41 VAL C 43 1 O VAL C 43 N THR C 11 SHEET 3 AA5 9 LYS C 76 GLY C 80 1 O LYS C 76 N VAL C 42 SHEET 4 AA5 9 GLY C 103 VAL C 107 1 O LEU C 105 N ALA C 79 SHEET 5 AA5 9 VAL C 134 ASN C 138 1 O LEU C 135 N ILE C 104 SHEET 6 AA5 9 ILE C 162 GLU C 167 1 O LYS C 166 N LEU C 136 SHEET 7 AA5 9 MET C 186 SER C 189 1 O ILE C 188 N VAL C 165 SHEET 8 AA5 9 GLY C 205 SER C 208 1 O ILE C 207 N SER C 189 SHEET 9 AA5 9 GLY C 8 ALA C 12 1 N MET C 10 O SER C 208 SHEET 1 AA6 2 PHE C 17 LYS C 18 0 SHEET 2 AA6 2 LYS C 21 VAL C 22 -1 O LYS C 21 N LYS C 18 SHEET 1 AA7 9 GLY D 8 ALA D 12 0 SHEET 2 AA7 9 ALA D 41 VAL D 43 1 O VAL D 43 N THR D 11 SHEET 3 AA7 9 LYS D 76 GLY D 80 1 O LEU D 78 N VAL D 42 SHEET 4 AA7 9 GLY D 103 VAL D 107 1 O LEU D 105 N ALA D 79 SHEET 5 AA7 9 VAL D 134 ASN D 138 1 O LEU D 135 N ILE D 104 SHEET 6 AA7 9 ILE D 162 GLU D 167 1 O LYS D 166 N LEU D 136 SHEET 7 AA7 9 MET D 186 SER D 189 1 O ILE D 188 N GLU D 167 SHEET 8 AA7 9 GLY D 205 SER D 208 1 O ILE D 207 N SER D 189 SHEET 9 AA7 9 GLY D 8 ALA D 12 1 N MET D 10 O SER D 208 SHEET 1 AA8 2 PHE D 17 LYS D 18 0 SHEET 2 AA8 2 LYS D 21 VAL D 22 -1 O LYS D 21 N LYS D 18 CISPEP 1 ASN A 252 PRO A 253 0 5.99 CISPEP 2 LEU A 273 PRO A 274 0 9.29 CISPEP 3 ASN B 252 PRO B 253 0 2.16 CISPEP 4 LEU B 273 PRO B 274 0 10.82 CISPEP 5 ASN C 252 PRO C 253 0 3.10 CISPEP 6 LEU C 273 PRO C 274 0 7.97 CISPEP 7 ASN D 252 PRO D 253 0 1.78 CISPEP 8 LEU D 273 PRO D 274 0 10.40 SITE 1 AC1 19 SER A 51 ALA A 52 LEU A 54 HIS A 59 SITE 2 AC1 19 ASN A 84 GLU A 88 PHE A 110 HOH A 441 SITE 3 AC1 19 SER B 51 ALA B 52 LEU B 54 HIS B 56 SITE 4 AC1 19 HIS B 59 ASN B 84 GLU B 88 PHE B 110 SITE 5 AC1 19 EDO B 305 HOH B 403 HOH B 434 SITE 1 AC2 5 GLN A 117 TYR A 120 ASP A 150 THR A 151 SITE 2 AC2 5 LYS A 154 SITE 1 AC3 3 ALA A 263 GLY A 264 GLY A 297 SITE 1 AC4 1 GLY A 144 SITE 1 AC5 3 THR A 69 LYS A 71 THR A 73 SITE 1 AC6 4 GLY B 46 THR B 47 THR B 48 LYS B 166 SITE 1 AC7 4 GLN B 117 TYR B 120 THR B 151 LYS B 154 SITE 1 AC8 2 LYS B 32 THR B 69 SITE 1 AC9 8 ALA A 52 LEU A 54 THR A 55 3VN A 301 SITE 2 AC9 8 HIS B 87 GLU B 88 HOH B 419 HOH B 441 SITE 1 AD1 5 CYS C 70 GLY C 72 THR C 73 VAL C 75 SITE 2 AD1 5 ASP C 102 SITE 1 AD2 1 TYR C 261 SITE 1 AD3 15 SER C 51 ALA C 52 LEU C 54 HIS C 59 SITE 2 AD3 15 ASN C 84 GLU C 88 SER D 51 ALA D 52 SITE 3 AD3 15 LEU D 54 HIS D 59 ASN D 84 GLU D 88 SITE 4 AD3 15 PHE D 110 HOH D 405 HOH D 423 SITE 1 AD4 2 TYR D 261 LEU D 262 SITE 1 AD5 3 ASP D 150 THR D 151 LYS D 154 CRYST1 79.590 96.780 145.980 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012564 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010333 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006850 0.00000