HEADER TRANSFERASE 03-DEC-15 5F42 TITLE ACTIVITY AND CRYSTAL STRUCTURE OF FRANCISELLA NOVICIDA UDP-N- TITLE 2 ACETYLGLUCOSAMINE ACYLTRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAMINE O- COMPND 3 ACYLTRANSFERASE; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: UDP-N-ACETYLGLUCOSAMINE ACYLTRANSFERASE; COMPND 6 EC: 2.3.1.129; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FRANCISELLA TULARENSIS SUBSP. NOVICIDA (STRAIN SOURCE 3 U112); SOURCE 4 ORGANISM_TAXID: 401614; SOURCE 5 STRAIN: U112; SOURCE 6 GENE: LPXA, FTN_1478; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS LEFT-HANDED PARALLEL BETA HELIX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.H.JOO,C.R.H.RAETZ REVDAT 4 08-NOV-23 5F42 1 REMARK REVDAT 3 23-MAR-22 5F42 1 REMARK REVDAT 2 18-OCT-17 5F42 1 JRNL REMARK REVDAT 1 12-OCT-16 5F42 0 JRNL AUTH S.H.JOO,H.S.CHUNG JRNL TITL CRYSTAL STRUCTURE AND ACTIVITY OF FRANCISELLA NOVICIDA JRNL TITL 2 UDP-N-ACETYLGLUCOSAMINE ACYLTRANSFERASE JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 478 1223 2016 JRNL REFN ESSN 1090-2104 JRNL PMID 27545601 JRNL DOI 10.1016/J.BBRC.2016.08.098 REMARK 2 REMARK 2 RESOLUTION. 2.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 35986 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1894 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.06 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.11 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2606 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2560 REMARK 3 BIN FREE R VALUE SET COUNT : 138 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4200 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 379 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.224 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.194 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.138 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.122 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4274 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5772 ; 1.112 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 550 ; 5.862 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 176 ;35.273 ;24.545 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 754 ;13.876 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;19.061 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 664 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3158 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2055 ; 0.188 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2948 ; 0.299 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 382 ; 0.119 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 114 ; 0.173 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 38 ; 0.140 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2787 ; 0.545 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4392 ; 0.961 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1629 ; 1.349 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1380 ; 2.219 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5F42 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000215985. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35991 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.060 REMARK 200 RESOLUTION RANGE LOW (A) : 19.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.0200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.06 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 1LXA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULFATE, 0.1M TRIS HCL PH REMARK 280 8.5, 30% PEG 4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 52.69000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 30.42059 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 95.26333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 52.69000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 30.42059 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 95.26333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 52.69000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 30.42059 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 95.26333 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 52.69000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 30.42059 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 95.26333 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 52.69000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 30.42059 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 95.26333 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 52.69000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 30.42059 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 95.26333 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 60.84117 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 190.52667 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 60.84117 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 190.52667 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 60.84117 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 190.52667 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 60.84117 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 190.52667 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 60.84117 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 190.52667 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 60.84117 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 190.52667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 503 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 506 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 508 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 470 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 471 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 277 REMARK 465 HIS A 278 REMARK 465 HIS A 279 REMARK 465 HIS A 280 REMARK 465 HIS B 277 REMARK 465 HIS B 278 REMARK 465 HIS B 279 REMARK 465 HIS B 280 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 100 -108.89 -111.64 REMARK 500 TYR A 145 -1.31 68.94 REMARK 500 TYR A 179 -6.18 75.08 REMARK 500 VAL A 185 41.81 -85.60 REMARK 500 ASN A 186 -70.07 71.70 REMARK 500 GLU B 100 -102.07 -96.77 REMARK 500 TYR B 179 -0.95 72.51 REMARK 500 VAL B 185 46.10 -94.81 REMARK 500 ASN B 186 -70.98 73.72 REMARK 500 CYS B 192 36.89 -143.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 507 DISTANCE = 6.29 ANGSTROMS REMARK 525 HOH A 508 DISTANCE = 6.47 ANGSTROMS DBREF 5F42 A 1 259 UNP A0Q7Y0 A0Q7Y0_FRATN 1 259 DBREF 5F42 B 1 259 UNP A0Q7Y0 A0Q7Y0_FRATN 1 259 SEQADV 5F42 ASP A 260 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 PRO A 261 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 ASN A 262 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 SER A 263 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 SER A 264 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 SER A 265 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 VAL A 266 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 ASP A 267 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 LYS A 268 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 LEU A 269 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 ALA A 270 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 ALA A 271 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 ALA A 272 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 LEU A 273 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 GLU A 274 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 HIS A 275 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 HIS A 276 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 HIS A 277 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 HIS A 278 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 HIS A 279 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 HIS A 280 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 ASP B 260 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 PRO B 261 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 ASN B 262 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 SER B 263 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 SER B 264 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 SER B 265 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 VAL B 266 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 ASP B 267 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 LYS B 268 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 LEU B 269 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 ALA B 270 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 ALA B 271 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 ALA B 272 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 LEU B 273 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 GLU B 274 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 HIS B 275 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 HIS B 276 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 HIS B 277 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 HIS B 278 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 HIS B 279 UNP A0Q7Y0 EXPRESSION TAG SEQADV 5F42 HIS B 280 UNP A0Q7Y0 EXPRESSION TAG SEQRES 1 A 280 MET ILE HIS SER LEU ALA VAL VAL HIS GLU SER ALA LYS SEQRES 2 A 280 ILE ALA ASP SER ALA ILE ILE GLY PRO PHE CYS VAL ILE SEQRES 3 A 280 GLY LYS ASN VAL VAL ILE GLY GLU ASN THR GLU LEU LYS SEQRES 4 A 280 SER HIS VAL THR ILE GLY ASP ASN ALA VAL ILE GLY LYS SEQRES 5 A 280 ASN ASN ARG ILE PHE GLN TYR ALA SER ILE GLY ASP ASP SEQRES 6 A 280 PRO ILE ASP TYR THR TYR LYS LYS GLY ASP PHE SER GLN SEQRES 7 A 280 VAL VAL ILE GLY ASP ASN ASN ILE ILE ARG GLU CYS ALA SEQRES 8 A 280 THR ILE HIS GLY GLY THR ALA LYS GLU ILE GLY VAL THR SEQRES 9 A 280 SER VAL GLY ASN ASN ASN ILE ILE MET CYS TYR VAL HIS SEQRES 10 A 280 ILE GLY HIS ASP CYS LYS ILE GLY SER TYR ILE ASN LEU SEQRES 11 A 280 VAL ASN GLY VAL GLY LEU ALA GLY HIS VAL HIS ILE ASP SEQRES 12 A 280 ASP TYR ALA ILE LEU SER SER ASN VAL GLY VAL HIS GLN SEQRES 13 A 280 PHE CYS ARG VAL GLY LYS HIS ALA PHE ILE ALA HIS ALA SEQRES 14 A 280 ALA LEU VAL GLY LYS ASP VAL PRO PRO TYR LEU MET VAL SEQRES 15 A 280 THR ALA VAL ASN ALA GLY SER THR PRO CYS GLY ILE ASN SEQRES 16 A 280 THR GLU GLY LEU LYS ARG ARG GLY PHE THR PRO GLU GLU SEQRES 17 A 280 MET LYS LYS ILE LYS GLU VAL TYR LYS VAL LEU TYR ARG SEQRES 18 A 280 LYS GLY LEU MET MET LYS GLU ALA PHE GLU ILE ILE LYS SEQRES 19 A 280 GLU MET ALA LYS GLU ASP LYS VAL LEU GLU PRO PHE VAL SEQRES 20 A 280 ASP VAL ILE GLY THR SER ARG ARG GLY ILE LEU ARG ASP SEQRES 21 A 280 PRO ASN SER SER SER VAL ASP LYS LEU ALA ALA ALA LEU SEQRES 22 A 280 GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 280 MET ILE HIS SER LEU ALA VAL VAL HIS GLU SER ALA LYS SEQRES 2 B 280 ILE ALA ASP SER ALA ILE ILE GLY PRO PHE CYS VAL ILE SEQRES 3 B 280 GLY LYS ASN VAL VAL ILE GLY GLU ASN THR GLU LEU LYS SEQRES 4 B 280 SER HIS VAL THR ILE GLY ASP ASN ALA VAL ILE GLY LYS SEQRES 5 B 280 ASN ASN ARG ILE PHE GLN TYR ALA SER ILE GLY ASP ASP SEQRES 6 B 280 PRO ILE ASP TYR THR TYR LYS LYS GLY ASP PHE SER GLN SEQRES 7 B 280 VAL VAL ILE GLY ASP ASN ASN ILE ILE ARG GLU CYS ALA SEQRES 8 B 280 THR ILE HIS GLY GLY THR ALA LYS GLU ILE GLY VAL THR SEQRES 9 B 280 SER VAL GLY ASN ASN ASN ILE ILE MET CYS TYR VAL HIS SEQRES 10 B 280 ILE GLY HIS ASP CYS LYS ILE GLY SER TYR ILE ASN LEU SEQRES 11 B 280 VAL ASN GLY VAL GLY LEU ALA GLY HIS VAL HIS ILE ASP SEQRES 12 B 280 ASP TYR ALA ILE LEU SER SER ASN VAL GLY VAL HIS GLN SEQRES 13 B 280 PHE CYS ARG VAL GLY LYS HIS ALA PHE ILE ALA HIS ALA SEQRES 14 B 280 ALA LEU VAL GLY LYS ASP VAL PRO PRO TYR LEU MET VAL SEQRES 15 B 280 THR ALA VAL ASN ALA GLY SER THR PRO CYS GLY ILE ASN SEQRES 16 B 280 THR GLU GLY LEU LYS ARG ARG GLY PHE THR PRO GLU GLU SEQRES 17 B 280 MET LYS LYS ILE LYS GLU VAL TYR LYS VAL LEU TYR ARG SEQRES 18 B 280 LYS GLY LEU MET MET LYS GLU ALA PHE GLU ILE ILE LYS SEQRES 19 B 280 GLU MET ALA LYS GLU ASP LYS VAL LEU GLU PRO PHE VAL SEQRES 20 B 280 ASP VAL ILE GLY THR SER ARG ARG GLY ILE LEU ARG ASP SEQRES 21 B 280 PRO ASN SER SER SER VAL ASP LYS LEU ALA ALA ALA LEU SEQRES 22 B 280 GLU HIS HIS HIS HIS HIS HIS FORMUL 3 HOH *379(H2 O) HELIX 1 AA1 ASN A 195 ARG A 202 1 8 HELIX 2 AA2 THR A 205 ARG A 221 1 17 HELIX 3 AA3 MET A 225 ASP A 240 1 16 HELIX 4 AA4 LEU A 243 THR A 252 1 10 HELIX 5 AA5 ASN A 262 VAL A 266 5 5 HELIX 6 AA6 ASP A 267 ALA A 272 1 6 HELIX 7 AA7 ASN B 195 ARG B 202 1 8 HELIX 8 AA8 THR B 205 ARG B 221 1 17 HELIX 9 AA9 MET B 225 ASP B 240 1 16 HELIX 10 AB1 LEU B 243 THR B 252 1 10 HELIX 11 AB2 ASN B 262 VAL B 266 5 5 HELIX 12 AB3 ASP B 267 ALA B 272 1 6 SHEET 1 AA1 9 VAL A 7 VAL A 8 0 SHEET 2 AA1 9 VAL A 25 ILE A 26 1 O ILE A 26 N VAL A 7 SHEET 3 AA1 9 THR A 43 ILE A 44 1 O ILE A 44 N VAL A 25 SHEET 4 AA1 9 SER A 61 ASP A 64 1 O ILE A 62 N THR A 43 SHEET 5 AA1 9 THR A 92 HIS A 94 1 O ILE A 93 N GLY A 63 SHEET 6 AA1 9 HIS A 117 ILE A 118 1 O ILE A 118 N THR A 92 SHEET 7 AA1 9 GLY A 135 LEU A 136 1 O LEU A 136 N HIS A 117 SHEET 8 AA1 9 GLY A 153 VAL A 154 1 O VAL A 154 N GLY A 135 SHEET 9 AA1 9 LEU A 171 VAL A 172 1 O VAL A 172 N GLY A 153 SHEET 1 AA2 8 LYS A 13 ILE A 14 0 SHEET 2 AA2 8 VAL A 31 ILE A 32 1 O ILE A 32 N LYS A 13 SHEET 3 AA2 8 VAL A 49 ILE A 50 1 O ILE A 50 N VAL A 31 SHEET 4 AA2 8 GLN A 78 ILE A 81 1 O ILE A 81 N VAL A 49 SHEET 5 AA2 8 VAL A 103 VAL A 106 1 O VAL A 106 N VAL A 80 SHEET 6 AA2 8 LYS A 123 ILE A 124 1 O ILE A 124 N SER A 105 SHEET 7 AA2 8 HIS A 141 ILE A 142 1 O ILE A 142 N LYS A 123 SHEET 8 AA2 8 ARG A 159 VAL A 160 1 O VAL A 160 N HIS A 141 SHEET 1 AA310 ILE A 19 ILE A 20 0 SHEET 2 AA310 GLU A 37 LEU A 38 1 O LEU A 38 N ILE A 19 SHEET 3 AA310 ARG A 55 ILE A 56 1 O ILE A 56 N GLU A 37 SHEET 4 AA310 ILE A 86 ILE A 87 1 O ILE A 87 N ARG A 55 SHEET 5 AA310 ILE A 111 ILE A 112 1 O ILE A 112 N ILE A 86 SHEET 6 AA310 ASN A 129 LEU A 130 1 O LEU A 130 N ILE A 111 SHEET 7 AA310 ILE A 147 LEU A 148 1 O LEU A 148 N ASN A 129 SHEET 8 AA310 PHE A 165 ILE A 166 1 O ILE A 166 N ILE A 147 SHEET 9 AA310 LEU A 180 THR A 183 1 O LEU A 180 N PHE A 165 SHEET 10 AA310 THR A 190 ILE A 194 -1 O CYS A 192 N MET A 181 SHEET 1 AA4 9 VAL B 7 VAL B 8 0 SHEET 2 AA4 9 VAL B 25 ILE B 26 1 O ILE B 26 N VAL B 7 SHEET 3 AA4 9 THR B 43 ILE B 44 1 O ILE B 44 N VAL B 25 SHEET 4 AA4 9 SER B 61 ASP B 64 1 O ILE B 62 N THR B 43 SHEET 5 AA4 9 THR B 92 HIS B 94 1 O ILE B 93 N GLY B 63 SHEET 6 AA4 9 HIS B 117 ILE B 118 1 O ILE B 118 N THR B 92 SHEET 7 AA4 9 GLY B 135 LEU B 136 1 O LEU B 136 N HIS B 117 SHEET 8 AA4 9 GLY B 153 VAL B 154 1 O VAL B 154 N GLY B 135 SHEET 9 AA4 9 LEU B 171 VAL B 172 1 O VAL B 172 N GLY B 153 SHEET 1 AA5 8 LYS B 13 ILE B 14 0 SHEET 2 AA5 8 VAL B 31 ILE B 32 1 O ILE B 32 N LYS B 13 SHEET 3 AA5 8 VAL B 49 ILE B 50 1 O ILE B 50 N VAL B 31 SHEET 4 AA5 8 GLN B 78 ILE B 81 1 O ILE B 81 N VAL B 49 SHEET 5 AA5 8 VAL B 103 VAL B 106 1 O THR B 104 N VAL B 80 SHEET 6 AA5 8 LYS B 123 ILE B 124 1 O ILE B 124 N SER B 105 SHEET 7 AA5 8 HIS B 141 ILE B 142 1 O ILE B 142 N LYS B 123 SHEET 8 AA5 8 ARG B 159 VAL B 160 1 O VAL B 160 N HIS B 141 SHEET 1 AA610 ILE B 19 ILE B 20 0 SHEET 2 AA610 GLU B 37 LEU B 38 1 O LEU B 38 N ILE B 19 SHEET 3 AA610 ARG B 55 ILE B 56 1 O ILE B 56 N GLU B 37 SHEET 4 AA610 ILE B 86 ILE B 87 1 O ILE B 87 N ARG B 55 SHEET 5 AA610 ILE B 111 ILE B 112 1 O ILE B 112 N ILE B 86 SHEET 6 AA610 ASN B 129 LEU B 130 1 O LEU B 130 N ILE B 111 SHEET 7 AA610 ILE B 147 LEU B 148 1 O LEU B 148 N ASN B 129 SHEET 8 AA610 PHE B 165 ILE B 166 1 O ILE B 166 N ILE B 147 SHEET 9 AA610 LEU B 180 THR B 183 1 O LEU B 180 N PHE B 165 SHEET 10 AA610 THR B 190 ILE B 194 -1 O GLY B 193 N MET B 181 CRYST1 105.380 105.380 285.790 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009489 0.005479 0.000000 0.00000 SCALE2 0.000000 0.010957 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003499 0.00000