HEADER TRANSFERASE 03-DEC-15 5F48 TITLE CRYSTAL STRUCTURE OF AN AMINOGLYCOSIDE ACETYLTRANSFERASE META-AAC0020 TITLE 2 FROM AN UNCULTURED SOIL METAGENOMIC SAMPLE IN COMPLEX WITH COENZYME A CAVEAT 5F48 COA B 203 HAS WRONG CHIRALITY AT ATOM C3B COA B 203 HAS CAVEAT 2 5F48 WRONG CHIRALITY AT ATOM C4B COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOGLYCOSIDE ACETYLTRANSFERASE META-AAC0020; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS GNAT FOLD, GCN5-N-ACETYLTRANSFERASE FOLD, ACETYLTRANSFERASE, KEYWDS 2 AMINOGLYCOSIDE, ANTIBIOTIC RESISTANCE, METAGENOME, SOIL, COENZYME A, KEYWDS 3 STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 4 DISEASES, CSGID, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.XU,T.SKARINA,P.J.STOGIOS,V.YIM,A.SAVCHENKO,W.F.ANDERSON,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 4 06-MAR-24 5F48 1 LINK REVDAT 3 03-APR-19 5F48 1 TITLE COMPND JRNL REMARK REVDAT 2 24-FEB-16 5F48 1 AUTHOR REVDAT 1 30-DEC-15 5F48 0 JRNL AUTH Z.XU,P.J.STOGIOS,A.T.QUAILE,K.J.FORSBERG,S.PATEL,T.SKARINA, JRNL AUTH 2 S.HOULISTON,C.ARROWSMITH,G.DANTAS,A.SAVCHENKO JRNL TITL STRUCTURAL AND FUNCTIONAL SURVEY OF ENVIRONMENTAL JRNL TITL 2 AMINOGLYCOSIDE ACETYLTRANSFERASES REVEALS FUNCTIONALITY OF JRNL TITL 3 RESISTANCE ENZYMES. JRNL REF ACS INFECT DIS V. 3 653 2017 JRNL REFN ESSN 2373-8227 JRNL PMID 28756664 JRNL DOI 10.1021/ACSINFECDIS.7B00068 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 27937 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1403 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.6232 - 4.1948 0.98 2723 141 0.1705 0.2089 REMARK 3 2 4.1948 - 3.3325 0.98 2696 141 0.1577 0.1883 REMARK 3 3 3.3325 - 2.9121 0.99 2694 139 0.1849 0.2423 REMARK 3 4 2.9121 - 2.6462 0.98 2668 144 0.1972 0.2503 REMARK 3 5 2.6462 - 2.4568 0.98 2674 139 0.1942 0.2605 REMARK 3 6 2.4568 - 2.3121 0.98 2632 147 0.1941 0.2372 REMARK 3 7 2.3121 - 2.1964 0.97 2633 142 0.1989 0.2464 REMARK 3 8 2.1964 - 2.1008 0.97 2627 139 0.2227 0.2785 REMARK 3 9 2.1008 - 2.0200 0.96 2633 136 0.2728 0.3188 REMARK 3 10 2.0200 - 1.9503 0.94 2554 135 0.3107 0.3603 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 2711 REMARK 3 ANGLE : 1.243 3672 REMARK 3 CHIRALITY : 0.047 383 REMARK 3 PLANARITY : 0.006 459 REMARK 3 DIHEDRAL : 20.165 1078 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 8:10) REMARK 3 ORIGIN FOR THE GROUP (A): 19.8291 2.8792 29.8303 REMARK 3 T TENSOR REMARK 3 T11: 1.3816 T22: 0.9483 REMARK 3 T33: 0.5522 T12: 0.3402 REMARK 3 T13: -0.1214 T23: 0.1392 REMARK 3 L TENSOR REMARK 3 L11: 1.1947 L22: 6.0326 REMARK 3 L33: 1.3626 L12: 0.7866 REMARK 3 L13: 0.2859 L23: 2.8598 REMARK 3 S TENSOR REMARK 3 S11: 0.6279 S12: 0.3668 S13: -1.1167 REMARK 3 S21: -0.9044 S22: -0.4584 S23: -0.8150 REMARK 3 S31: 2.3434 S32: 0.0041 S33: -0.2305 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 11:73) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6477 13.9148 22.0880 REMARK 3 T TENSOR REMARK 3 T11: 0.2082 T22: 0.1903 REMARK 3 T33: 0.1231 T12: -0.0124 REMARK 3 T13: 0.0109 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 3.8304 L22: 6.0563 REMARK 3 L33: 3.2952 L12: -0.1339 REMARK 3 L13: -0.3633 L23: -0.8339 REMARK 3 S TENSOR REMARK 3 S11: 0.0317 S12: -0.1338 S13: 0.0327 REMARK 3 S21: 0.2744 S22: 0.0150 S23: 0.0642 REMARK 3 S31: -0.2167 S32: 0.0640 S33: -0.0268 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 74:128) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0374 4.1706 11.5321 REMARK 3 T TENSOR REMARK 3 T11: 0.1693 T22: 0.2490 REMARK 3 T33: 0.1950 T12: 0.0496 REMARK 3 T13: 0.0157 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 5.0829 L22: 2.9398 REMARK 3 L33: 3.6952 L12: 2.4113 REMARK 3 L13: 1.5814 L23: 0.9365 REMARK 3 S TENSOR REMARK 3 S11: 0.0698 S12: -0.0811 S13: -0.1314 REMARK 3 S21: 0.0782 S22: -0.0053 S23: -0.0833 REMARK 3 S31: 0.0476 S32: 0.2766 S33: -0.0850 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 129:157) REMARK 3 ORIGIN FOR THE GROUP (A): 10.3746 12.6505 1.7474 REMARK 3 T TENSOR REMARK 3 T11: 0.2473 T22: 0.3030 REMARK 3 T33: 0.2347 T12: -0.0488 REMARK 3 T13: 0.0216 T23: -0.0364 REMARK 3 L TENSOR REMARK 3 L11: 7.4817 L22: 2.7623 REMARK 3 L33: 3.8747 L12: -3.6408 REMARK 3 L13: 3.5764 L23: -3.1328 REMARK 3 S TENSOR REMARK 3 S11: -0.1423 S12: 0.2104 S13: 0.2995 REMARK 3 S21: 0.1083 S22: -0.1144 S23: -0.2809 REMARK 3 S31: -0.1640 S32: 0.5390 S33: 0.2570 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 7:64) REMARK 3 ORIGIN FOR THE GROUP (A): -15.1426 1.9574 -4.4955 REMARK 3 T TENSOR REMARK 3 T11: 0.1996 T22: 0.1875 REMARK 3 T33: 0.2107 T12: -0.0554 REMARK 3 T13: -0.0197 T23: -0.0109 REMARK 3 L TENSOR REMARK 3 L11: 4.4675 L22: 3.5996 REMARK 3 L33: 5.3667 L12: -0.7324 REMARK 3 L13: -0.7556 L23: 0.9268 REMARK 3 S TENSOR REMARK 3 S11: -0.0113 S12: 0.0059 S13: -0.1431 REMARK 3 S21: 0.0644 S22: -0.0346 S23: 0.0538 REMARK 3 S31: 0.3008 S32: -0.2345 S33: 0.0457 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 65:85) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2610 12.4629 2.7505 REMARK 3 T TENSOR REMARK 3 T11: 0.2206 T22: 0.2633 REMARK 3 T33: 0.2445 T12: 0.0610 REMARK 3 T13: 0.0314 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 3.0560 L22: 5.7638 REMARK 3 L33: 3.6680 L12: 3.6123 REMARK 3 L13: 2.0786 L23: 4.3032 REMARK 3 S TENSOR REMARK 3 S11: 0.1028 S12: -0.2502 S13: 0.1071 REMARK 3 S21: 0.1444 S22: -0.3695 S23: 0.1232 REMARK 3 S31: -0.0028 S32: -0.6791 S33: 0.3641 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 86:141) REMARK 3 ORIGIN FOR THE GROUP (A): -6.6406 14.1065 -7.9306 REMARK 3 T TENSOR REMARK 3 T11: 0.1823 T22: 0.1107 REMARK 3 T33: 0.1709 T12: 0.0002 REMARK 3 T13: -0.0031 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 3.4211 L22: 1.7971 REMARK 3 L33: 7.1282 L12: 0.0289 REMARK 3 L13: -1.0151 L23: 0.5676 REMARK 3 S TENSOR REMARK 3 S11: -0.0079 S12: 0.0491 S13: -0.0241 REMARK 3 S21: -0.0575 S22: 0.0723 S23: -0.1263 REMARK 3 S31: -0.1018 S32: 0.2404 S33: -0.0571 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 142:157) REMARK 3 ORIGIN FOR THE GROUP (A): 6.5468 9.8295 -0.2277 REMARK 3 T TENSOR REMARK 3 T11: 0.2171 T22: 0.3009 REMARK 3 T33: 0.2463 T12: -0.0354 REMARK 3 T13: -0.0728 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: 1.4684 L22: 4.3132 REMARK 3 L33: 2.2356 L12: -1.2496 REMARK 3 L13: -0.3148 L23: -1.6840 REMARK 3 S TENSOR REMARK 3 S11: 0.1422 S12: 0.1826 S13: -0.0658 REMARK 3 S21: -0.4731 S22: -0.0499 S23: 0.0879 REMARK 3 S31: 0.1492 S32: 0.1754 S33: -0.0891 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5F48 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000215992. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27961 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.61100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: APOENZYME REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 9% PEG 8000, 0.2 M CALCIUM ACETATE REMARK 280 HYDRATE, 0.1 M SODIUM CACODYLATE, 20 MM GENTAMICIN, 20 ACETYL- REMARK 280 COA, PH 7, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 40.09350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLN A 3 REMARK 465 ASN A 4 REMARK 465 MET A 5 REMARK 465 GLU A 6 REMARK 465 ILE A 7 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 GLN B 3 REMARK 465 ASN B 4 REMARK 465 MET B 5 REMARK 465 GLU B 6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 488 O HOH B 507 2.16 REMARK 500 O HOH A 320 O HOH A 328 2.16 REMARK 500 OH TYR A 88 O HOH A 301 2.16 REMARK 500 NZ LYS A 50 O HOH A 302 2.18 REMARK 500 O HOH A 415 O HOH A 447 2.18 REMARK 500 O HOH B 305 O HOH B 346 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 65 -122.37 60.42 REMARK 500 TYR A 90 -62.54 -92.81 REMARK 500 GLU B 65 -119.73 54.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 482 DISTANCE = 6.17 ANGSTROMS REMARK 525 HOH A 483 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH A 484 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH A 485 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH A 486 DISTANCE = 6.85 ANGSTROMS REMARK 525 HOH A 487 DISTANCE = 7.07 ANGSTROMS REMARK 525 HOH A 488 DISTANCE = 7.18 ANGSTROMS REMARK 525 HOH A 489 DISTANCE = 9.13 ANGSTROMS REMARK 525 HOH B 511 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH B 512 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH B 513 DISTANCE = 6.82 ANGSTROMS REMARK 525 HOH B 514 DISTANCE = 7.23 ANGSTROMS REMARK 525 HOH B 515 DISTANCE = 7.66 ANGSTROMS REMARK 525 HOH B 516 DISTANCE = 7.69 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 14 OE2 REMARK 620 2 ASP A 20 OD1 108.7 REMARK 620 3 ASP A 20 OD2 98.8 57.4 REMARK 620 4 HOH A 346 O 88.9 75.7 132.5 REMARK 620 5 HOH A 361 O 167.5 83.7 87.1 95.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 333 O REMARK 620 2 GLU B 14 OE2 170.3 REMARK 620 3 ASP B 20 OD1 92.9 96.8 REMARK 620 4 ASP B 20 OD2 87.8 98.2 54.6 REMARK 620 5 HOH B 377 O 89.0 84.7 132.6 78.2 REMARK 620 6 HOH B 398 O 86.0 85.3 151.4 153.5 76.0 REMARK 620 7 HOH B 409 O 94.9 86.8 77.7 132.3 149.4 74.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 18 OE2 REMARK 620 2 ASN B 53 O 87.5 REMARK 620 3 COA B 201 O2B 115.0 38.2 REMARK 620 4 COA B 201 O8A 117.4 39.7 2.4 REMARK 620 5 HOH B 328 O 115.1 35.8 3.5 4.0 REMARK 620 6 HOH B 348 O 116.5 36.6 4.1 3.7 1.4 REMARK 620 7 HOH B 382 O 113.8 37.7 1.2 3.6 4.0 4.9 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue COA B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue COA B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP95418 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 5F46 RELATED DB: PDB REMARK 900 RELATED ID: 5F47 RELATED DB: PDB REMARK 900 RELATED ID: 5F49 RELATED DB: PDB REMARK 900 RELATED ID: 5U08 RELATED DB: PDB DBREF1 5F48 A 1 157 UNP A0A059WZ16_9BACT DBREF2 5F48 A A0A059WZ16 1 157 DBREF1 5F48 B 1 157 UNP A0A059WZ16_9BACT DBREF2 5F48 B A0A059WZ16 1 157 SEQRES 1 A 157 MET GLY GLN ASN MET GLU ILE ASP ASN PHE LEU LYS ILE SEQRES 2 A 157 GLU ARG LEU ALA GLU ASN ASP LEU PRO LYS PHE ILE GLN SEQRES 3 A 157 LEU ILE ARG LEU PHE GLU ALA VAL PHE GLU MET LYS ASN SEQRES 4 A 157 PHE SER ILE PRO ASP SER GLU HIS LEU GLN LYS LEU LEU SEQRES 5 A 157 ASN GLN ASN ASN PHE TYR VAL PHE VAL ALA LEU LEU GLU SEQRES 6 A 157 ASN LYS ILE VAL GLY GLY LEU THR SER TYR VAL LEU GLU SEQRES 7 A 157 GLN TYR TYR SER GLU LYS PRO LEU ALA TYR ILE TYR ASP SEQRES 8 A 157 LEU ALA VAL ASP THR ASN TRP GLN ARG GLN GLY ILE GLY SEQRES 9 A 157 LYS LYS LEU ILE THR ALA THR ASN GLN PHE TYR THR GLU SEQRES 10 A 157 LYS GLY PHE GLU GLU VAL PHE VAL GLN ALA ASP LYS VAL SEQRES 11 A 157 ASP ASP TYR ALA LEU ASP PHE TYR ARG SER THR LYS PRO SEQRES 12 A 157 THR ALA GLU GLU GLN VAL VAL HIS PHE TYR TYR THR LEU SEQRES 13 A 157 LYS SEQRES 1 B 157 MET GLY GLN ASN MET GLU ILE ASP ASN PHE LEU LYS ILE SEQRES 2 B 157 GLU ARG LEU ALA GLU ASN ASP LEU PRO LYS PHE ILE GLN SEQRES 3 B 157 LEU ILE ARG LEU PHE GLU ALA VAL PHE GLU MET LYS ASN SEQRES 4 B 157 PHE SER ILE PRO ASP SER GLU HIS LEU GLN LYS LEU LEU SEQRES 5 B 157 ASN GLN ASN ASN PHE TYR VAL PHE VAL ALA LEU LEU GLU SEQRES 6 B 157 ASN LYS ILE VAL GLY GLY LEU THR SER TYR VAL LEU GLU SEQRES 7 B 157 GLN TYR TYR SER GLU LYS PRO LEU ALA TYR ILE TYR ASP SEQRES 8 B 157 LEU ALA VAL ASP THR ASN TRP GLN ARG GLN GLY ILE GLY SEQRES 9 B 157 LYS LYS LEU ILE THR ALA THR ASN GLN PHE TYR THR GLU SEQRES 10 B 157 LYS GLY PHE GLU GLU VAL PHE VAL GLN ALA ASP LYS VAL SEQRES 11 B 157 ASP ASP TYR ALA LEU ASP PHE TYR ARG SER THR LYS PRO SEQRES 12 B 157 THR ALA GLU GLU GLN VAL VAL HIS PHE TYR TYR THR LEU SEQRES 13 B 157 LYS HET MG A 201 1 HET CL A 202 1 HET COA B 201 48 HET MG B 202 1 HET COA B 203 48 HET MG B 204 1 HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM COA COENZYME A FORMUL 3 MG 3(MG 2+) FORMUL 4 CL CL 1- FORMUL 5 COA 2(C21 H36 N7 O16 P3 S) FORMUL 9 HOH *405(H2 O) HELIX 1 AA1 ASP A 20 PHE A 35 1 16 HELIX 2 AA2 ASP A 44 GLN A 54 1 11 HELIX 3 AA3 THR A 96 GLN A 99 5 4 HELIX 4 AA4 GLY A 102 LYS A 118 1 17 HELIX 5 AA5 ASP A 131 ARG A 139 1 9 HELIX 6 AA6 ASP B 20 PHE B 35 1 16 HELIX 7 AA7 ASP B 44 ASN B 53 1 10 HELIX 8 AA8 THR B 96 GLN B 99 5 4 HELIX 9 AA9 GLY B 102 LYS B 118 1 17 HELIX 10 AB1 ASP B 131 THR B 141 1 11 SHEET 1 AA112 LEU A 11 ARG A 15 0 SHEET 2 AA112 PHE A 57 LEU A 64 -1 O LEU A 63 N LYS A 12 SHEET 3 AA112 LYS A 67 LEU A 77 -1 O GLY A 70 N ALA A 62 SHEET 4 AA112 LEU A 86 VAL A 94 -1 O LEU A 86 N LEU A 77 SHEET 5 AA112 GLU A 122 ASP A 128 1 O PHE A 124 N ILE A 89 SHEET 6 AA112 ALA B 145 THR B 155 -1 O TYR B 154 N VAL A 123 SHEET 7 AA112 ALA A 145 THR A 155 -1 N GLU A 147 O HIS B 151 SHEET 8 AA112 GLU B 122 ASP B 128 -1 O ALA B 127 N VAL A 150 SHEET 9 AA112 LEU B 86 VAL B 94 1 N ALA B 87 O PHE B 124 SHEET 10 AA112 LYS B 67 LEU B 77 -1 N LEU B 77 O LEU B 86 SHEET 11 AA112 PHE B 57 LEU B 64 -1 N ALA B 62 O GLY B 70 SHEET 12 AA112 LEU B 11 ARG B 15 -1 N LYS B 12 O LEU B 63 LINK OE2 GLU A 14 MG MG A 201 1555 1555 2.13 LINK OD1 ASP A 20 MG MG A 201 1555 1555 2.36 LINK OD2 ASP A 20 MG MG A 201 1555 1555 2.19 LINK MG MG A 201 O HOH A 346 1555 1555 2.16 LINK MG MG A 201 O HOH A 361 1555 1555 2.13 LINK O HOH A 333 MG MG B 204 1455 1555 2.37 LINK OE2 GLU B 14 MG MG B 204 1555 1555 2.16 LINK OE2 GLU B 18 MG MG B 202 1555 1455 2.37 LINK OD1 ASP B 20 MG MG B 204 1555 1555 2.50 LINK OD2 ASP B 20 MG MG B 204 1555 1555 2.23 LINK O ASN B 53 MG MG B 202 1555 1455 2.59 LINK O2B COA B 201 MG MG B 202 1555 1555 2.63 LINK O8A COA B 201 MG MG B 202 1555 1555 2.40 LINK MG MG B 202 O HOH B 328 1555 1655 2.25 LINK MG MG B 202 O HOH B 348 1555 1655 2.18 LINK MG MG B 202 O HOH B 382 1555 1655 2.18 LINK MG MG B 204 O HOH B 377 1555 1555 2.17 LINK MG MG B 204 O HOH B 398 1555 1555 2.10 LINK MG MG B 204 O HOH B 409 1555 1555 2.18 SITE 1 AC1 4 GLU A 14 ASP A 20 HOH A 346 HOH A 361 SITE 1 AC2 2 ILE A 25 ARG A 29 SITE 1 AC3 27 VAL A 34 LEU A 92 ALA A 93 VAL A 94 SITE 2 AC3 27 GLN A 99 ARG A 100 GLN A 101 GLY A 102 SITE 3 AC3 27 ILE A 103 GLY A 104 LYS A 105 ASP A 131 SITE 4 AC3 27 TYR A 133 ASP A 136 PHE A 137 SER A 140 SITE 5 AC3 27 HOH A 336 HOH A 400 GLU B 18 MG B 202 SITE 6 AC3 27 HOH B 308 HOH B 324 HOH B 328 HOH B 348 SITE 7 AC3 27 HOH B 382 HOH B 426 HOH B 431 SITE 1 AC4 6 GLU B 18 ASN B 53 COA B 201 HOH B 328 SITE 2 AC4 6 HOH B 348 HOH B 382 SITE 1 AC5 24 ASN A 19 LEU A 21 PRO A 22 LEU B 92 SITE 2 AC5 24 ALA B 93 VAL B 94 GLN B 99 ARG B 100 SITE 3 AC5 24 GLN B 101 GLY B 102 ILE B 103 GLY B 104 SITE 4 AC5 24 LYS B 105 TYR B 133 PHE B 137 SER B 140 SITE 5 AC5 24 HOH B 319 HOH B 335 HOH B 343 HOH B 347 SITE 6 AC5 24 HOH B 401 HOH B 422 HOH B 423 HOH B 432 SITE 1 AC6 6 HOH A 333 GLU B 14 ASP B 20 HOH B 377 SITE 2 AC6 6 HOH B 398 HOH B 409 CRYST1 46.133 80.187 53.926 90.00 91.97 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021676 0.000000 0.000746 0.00000 SCALE2 0.000000 0.012471 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018555 0.00000