data_5F58 # _entry.id 5F58 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5F58 pdb_00005f58 10.2210/pdb5f58/pdb WWPDB D_1000216035 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-12-07 2 'Structure model' 1 1 2023-09-27 3 'Structure model' 1 2 2024-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' 4 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_entry_details 6 3 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5F58 _pdbx_database_status.recvd_initial_deposition_date 2015-12-04 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 4RUU unspecified PDB . 4EEJ unspecified PDB . 4GKC unspecified PDB . 4EDE unspecified PDB . 4EFG unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nosrati, M.' 1 'Nossoni, Z.' 2 'Geiger, J.H.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Crystal structure of the Q108K:K40L:T51V:R58F mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal after 24 hours of incubation at 1.54 Angstrom Resolution ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nossoni, Z.' 1 ? primary 'Nosrati, M.' 2 ? primary 'Wang, W.' 3 ? primary 'Berbasova, T.' 4 ? primary 'Vasileiou, C.' 5 ? primary 'Borhan, B.' 6 ? primary 'Geiger, J.H.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Retinol-binding protein 2' 15570.489 2 ? 'Q108K, K40L, T51V, R58F' ? ? 2 non-polymer syn RETINAL 284.436 2 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 3 ? ? ? ? 4 water nat water 18.015 237 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cellular retinol-binding protein II,CRBP-II' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRLTQTLVIDQDGDNFKVKTTSTFFNYDVDFTVGVEFDEYTKSLDNR HVKALVTWEGDVLVCVQKGEKENRGWKKWIEGDKLYLELTCGDQVCRQVFKKK ; _entity_poly.pdbx_seq_one_letter_code_can ;TRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRLTQTLVIDQDGDNFKVKTTSTFFNYDVDFTVGVEFDEYTKSLDNR HVKALVTWEGDVLVCVQKGEKENRGWKKWIEGDKLYLELTCGDQVCRQVFKKK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 RETINAL RET 3 'ACETATE ION' ACT 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 ARG n 1 3 ASP n 1 4 GLN n 1 5 ASN n 1 6 GLY n 1 7 THR n 1 8 TRP n 1 9 GLU n 1 10 MET n 1 11 GLU n 1 12 SER n 1 13 ASN n 1 14 GLU n 1 15 ASN n 1 16 PHE n 1 17 GLU n 1 18 GLY n 1 19 TYR n 1 20 MET n 1 21 LYS n 1 22 ALA n 1 23 LEU n 1 24 ASP n 1 25 ILE n 1 26 ASP n 1 27 PHE n 1 28 ALA n 1 29 THR n 1 30 ARG n 1 31 LYS n 1 32 ILE n 1 33 ALA n 1 34 VAL n 1 35 ARG n 1 36 LEU n 1 37 THR n 1 38 GLN n 1 39 THR n 1 40 LEU n 1 41 VAL n 1 42 ILE n 1 43 ASP n 1 44 GLN n 1 45 ASP n 1 46 GLY n 1 47 ASP n 1 48 ASN n 1 49 PHE n 1 50 LYS n 1 51 VAL n 1 52 LYS n 1 53 THR n 1 54 THR n 1 55 SER n 1 56 THR n 1 57 PHE n 1 58 PHE n 1 59 ASN n 1 60 TYR n 1 61 ASP n 1 62 VAL n 1 63 ASP n 1 64 PHE n 1 65 THR n 1 66 VAL n 1 67 GLY n 1 68 VAL n 1 69 GLU n 1 70 PHE n 1 71 ASP n 1 72 GLU n 1 73 TYR n 1 74 THR n 1 75 LYS n 1 76 SER n 1 77 LEU n 1 78 ASP n 1 79 ASN n 1 80 ARG n 1 81 HIS n 1 82 VAL n 1 83 LYS n 1 84 ALA n 1 85 LEU n 1 86 VAL n 1 87 THR n 1 88 TRP n 1 89 GLU n 1 90 GLY n 1 91 ASP n 1 92 VAL n 1 93 LEU n 1 94 VAL n 1 95 CYS n 1 96 VAL n 1 97 GLN n 1 98 LYS n 1 99 GLY n 1 100 GLU n 1 101 LYS n 1 102 GLU n 1 103 ASN n 1 104 ARG n 1 105 GLY n 1 106 TRP n 1 107 LYS n 1 108 LYS n 1 109 TRP n 1 110 ILE n 1 111 GLU n 1 112 GLY n 1 113 ASP n 1 114 LYS n 1 115 LEU n 1 116 TYR n 1 117 LEU n 1 118 GLU n 1 119 LEU n 1 120 THR n 1 121 CYS n 1 122 GLY n 1 123 ASP n 1 124 GLN n 1 125 VAL n 1 126 CYS n 1 127 ARG n 1 128 GLN n 1 129 VAL n 1 130 PHE n 1 131 LYS n 1 132 LYS n 1 133 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 133 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'RBP2, CRBP2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET17b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 GLN 4 4 4 GLN GLN A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 TRP 8 8 8 TRP TRP A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 MET 10 10 10 MET MET A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 ASN 15 15 15 ASN ASN A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 TYR 19 19 19 TYR TYR A . n A 1 20 MET 20 20 20 MET MET A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 ASN 48 48 48 ASN ASN A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 PHE 57 57 57 PHE PHE A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 HIS 81 81 81 HIS HIS A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 TRP 88 88 88 TRP TRP A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 CYS 95 95 95 CYS CYS A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 GLN 97 97 97 GLN GLN A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 TRP 106 106 106 TRP TRP A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 TRP 109 109 109 TRP TRP A . n A 1 110 ILE 110 110 110 ILE ILE A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 THR 120 120 120 THR THR A . n A 1 121 CYS 121 121 121 CYS CYS A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 GLN 124 124 124 GLN GLN A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 CYS 126 126 126 CYS CYS A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 GLN 128 128 128 GLN GLN A . n A 1 129 VAL 129 129 129 VAL VAL A . n A 1 130 PHE 130 130 130 PHE PHE A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 LYS 133 133 133 LYS LYS A . n B 1 1 THR 1 1 1 THR THR B . n B 1 2 ARG 2 2 2 ARG ARG B . n B 1 3 ASP 3 3 3 ASP ASP B . n B 1 4 GLN 4 4 4 GLN GLN B . n B 1 5 ASN 5 5 5 ASN ASN B . n B 1 6 GLY 6 6 6 GLY GLY B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 TRP 8 8 8 TRP TRP B . n B 1 9 GLU 9 9 9 GLU GLU B . n B 1 10 MET 10 10 10 MET MET B . n B 1 11 GLU 11 11 11 GLU GLU B . n B 1 12 SER 12 12 12 SER SER B . n B 1 13 ASN 13 13 13 ASN ASN B . n B 1 14 GLU 14 14 14 GLU GLU B . n B 1 15 ASN 15 15 15 ASN ASN B . n B 1 16 PHE 16 16 16 PHE PHE B . n B 1 17 GLU 17 17 17 GLU GLU B . n B 1 18 GLY 18 18 18 GLY GLY B . n B 1 19 TYR 19 19 19 TYR TYR B . n B 1 20 MET 20 20 20 MET MET B . n B 1 21 LYS 21 21 21 LYS LYS B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 ASP 24 24 24 ASP ASP B . n B 1 25 ILE 25 25 25 ILE ILE B . n B 1 26 ASP 26 26 26 ASP ASP B . n B 1 27 PHE 27 27 27 PHE PHE B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 THR 29 29 29 THR THR B . n B 1 30 ARG 30 30 30 ARG ARG B . n B 1 31 LYS 31 31 31 LYS LYS B . n B 1 32 ILE 32 32 32 ILE ILE B . n B 1 33 ALA 33 33 33 ALA ALA B . n B 1 34 VAL 34 34 34 VAL VAL B . n B 1 35 ARG 35 35 35 ARG ARG B . n B 1 36 LEU 36 36 36 LEU LEU B . n B 1 37 THR 37 37 37 THR THR B . n B 1 38 GLN 38 38 38 GLN GLN B . n B 1 39 THR 39 39 39 THR THR B . n B 1 40 LEU 40 40 40 LEU LEU B . n B 1 41 VAL 41 41 41 VAL VAL B . n B 1 42 ILE 42 42 42 ILE ILE B . n B 1 43 ASP 43 43 43 ASP ASP B . n B 1 44 GLN 44 44 44 GLN GLN B . n B 1 45 ASP 45 45 45 ASP ASP B . n B 1 46 GLY 46 46 46 GLY GLY B . n B 1 47 ASP 47 47 47 ASP ASP B . n B 1 48 ASN 48 48 48 ASN ASN B . n B 1 49 PHE 49 49 49 PHE PHE B . n B 1 50 LYS 50 50 50 LYS LYS B . n B 1 51 VAL 51 51 51 VAL VAL B . n B 1 52 LYS 52 52 52 LYS LYS B . n B 1 53 THR 53 53 53 THR THR B . n B 1 54 THR 54 54 54 THR THR B . n B 1 55 SER 55 55 55 SER SER B . n B 1 56 THR 56 56 56 THR THR B . n B 1 57 PHE 57 57 57 PHE PHE B . n B 1 58 PHE 58 58 58 PHE PHE B . n B 1 59 ASN 59 59 59 ASN ASN B . n B 1 60 TYR 60 60 60 TYR TYR B . n B 1 61 ASP 61 61 61 ASP ASP B . n B 1 62 VAL 62 62 62 VAL VAL B . n B 1 63 ASP 63 63 63 ASP ASP B . n B 1 64 PHE 64 64 64 PHE PHE B . n B 1 65 THR 65 65 65 THR THR B . n B 1 66 VAL 66 66 66 VAL VAL B . n B 1 67 GLY 67 67 67 GLY GLY B . n B 1 68 VAL 68 68 68 VAL VAL B . n B 1 69 GLU 69 69 69 GLU GLU B . n B 1 70 PHE 70 70 70 PHE PHE B . n B 1 71 ASP 71 71 71 ASP ASP B . n B 1 72 GLU 72 72 72 GLU GLU B . n B 1 73 TYR 73 73 73 TYR TYR B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 LYS 75 75 75 LYS LYS B . n B 1 76 SER 76 76 76 SER SER B . n B 1 77 LEU 77 77 77 LEU LEU B . n B 1 78 ASP 78 78 78 ASP ASP B . n B 1 79 ASN 79 79 79 ASN ASN B . n B 1 80 ARG 80 80 80 ARG ARG B . n B 1 81 HIS 81 81 81 HIS HIS B . n B 1 82 VAL 82 82 82 VAL VAL B . n B 1 83 LYS 83 83 83 LYS LYS B . n B 1 84 ALA 84 84 84 ALA ALA B . n B 1 85 LEU 85 85 85 LEU LEU B . n B 1 86 VAL 86 86 86 VAL VAL B . n B 1 87 THR 87 87 87 THR THR B . n B 1 88 TRP 88 88 88 TRP TRP B . n B 1 89 GLU 89 89 89 GLU GLU B . n B 1 90 GLY 90 90 90 GLY GLY B . n B 1 91 ASP 91 91 91 ASP ASP B . n B 1 92 VAL 92 92 92 VAL VAL B . n B 1 93 LEU 93 93 93 LEU LEU B . n B 1 94 VAL 94 94 94 VAL VAL B . n B 1 95 CYS 95 95 95 CYS CYS B . n B 1 96 VAL 96 96 96 VAL VAL B . n B 1 97 GLN 97 97 97 GLN GLN B . n B 1 98 LYS 98 98 98 LYS LYS B . n B 1 99 GLY 99 99 99 GLY GLY B . n B 1 100 GLU 100 100 100 GLU GLU B . n B 1 101 LYS 101 101 101 LYS LYS B . n B 1 102 GLU 102 102 102 GLU GLU B . n B 1 103 ASN 103 103 103 ASN ASN B . n B 1 104 ARG 104 104 104 ARG ARG B . n B 1 105 GLY 105 105 105 GLY GLY B . n B 1 106 TRP 106 106 106 TRP TRP B . n B 1 107 LYS 107 107 107 LYS LYS B . n B 1 108 LYS 108 108 108 LYS LYS B . n B 1 109 TRP 109 109 109 TRP TRP B . n B 1 110 ILE 110 110 110 ILE ILE B . n B 1 111 GLU 111 111 111 GLU GLU B . n B 1 112 GLY 112 112 112 GLY GLY B . n B 1 113 ASP 113 113 113 ASP ASP B . n B 1 114 LYS 114 114 114 LYS LYS B . n B 1 115 LEU 115 115 115 LEU LEU B . n B 1 116 TYR 116 116 116 TYR TYR B . n B 1 117 LEU 117 117 117 LEU LEU B . n B 1 118 GLU 118 118 118 GLU GLU B . n B 1 119 LEU 119 119 119 LEU LEU B . n B 1 120 THR 120 120 120 THR THR B . n B 1 121 CYS 121 121 121 CYS CYS B . n B 1 122 GLY 122 122 122 GLY GLY B . n B 1 123 ASP 123 123 123 ASP ASP B . n B 1 124 GLN 124 124 124 GLN GLN B . n B 1 125 VAL 125 125 125 VAL VAL B . n B 1 126 CYS 126 126 126 CYS CYS B . n B 1 127 ARG 127 127 127 ARG ARG B . n B 1 128 GLN 128 128 128 GLN GLN B . n B 1 129 VAL 129 129 129 VAL VAL B . n B 1 130 PHE 130 130 130 PHE PHE B . n B 1 131 LYS 131 131 131 LYS LYS B . n B 1 132 LYS 132 132 132 LYS LYS B . n B 1 133 LYS 133 133 133 LYS LYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 RET 1 201 1 RET RET A . D 3 ACT 1 202 1 ACT ACT A . E 3 ACT 1 203 1 ACT ACT A . F 2 RET 1 201 1 RET RET B . G 3 ACT 1 202 1 ACT ACT B . H 4 HOH 1 301 11 HOH HOH A . H 4 HOH 2 302 178 HOH HOH A . H 4 HOH 3 303 106 HOH HOH A . H 4 HOH 4 304 57 HOH HOH A . H 4 HOH 5 305 76 HOH HOH A . H 4 HOH 6 306 176 HOH HOH A . H 4 HOH 7 307 88 HOH HOH A . H 4 HOH 8 308 160 HOH HOH A . H 4 HOH 9 309 149 HOH HOH A . H 4 HOH 10 310 91 HOH HOH A . H 4 HOH 11 311 151 HOH HOH A . H 4 HOH 12 312 195 HOH HOH A . H 4 HOH 13 313 59 HOH HOH A . H 4 HOH 14 314 150 HOH HOH A . H 4 HOH 15 315 225 HOH HOH A . H 4 HOH 16 316 28 HOH HOH A . H 4 HOH 17 317 107 HOH HOH A . H 4 HOH 18 318 216 HOH HOH A . H 4 HOH 19 319 31 HOH HOH A . H 4 HOH 20 320 55 HOH HOH A . H 4 HOH 21 321 231 HOH HOH A . H 4 HOH 22 322 22 HOH HOH A . H 4 HOH 23 323 34 HOH HOH A . H 4 HOH 24 324 6 HOH HOH A . H 4 HOH 25 325 228 HOH HOH A . H 4 HOH 26 326 53 HOH HOH A . H 4 HOH 27 327 99 HOH HOH A . H 4 HOH 28 328 117 HOH HOH A . H 4 HOH 29 329 148 HOH HOH A . H 4 HOH 30 330 135 HOH HOH A . H 4 HOH 31 331 80 HOH HOH A . H 4 HOH 32 332 116 HOH HOH A . H 4 HOH 33 333 78 HOH HOH A . H 4 HOH 34 334 122 HOH HOH A . H 4 HOH 35 335 16 HOH HOH A . H 4 HOH 36 336 68 HOH HOH A . H 4 HOH 37 337 70 HOH HOH A . H 4 HOH 38 338 136 HOH HOH A . H 4 HOH 39 339 27 HOH HOH A . H 4 HOH 40 340 202 HOH HOH A . H 4 HOH 41 341 30 HOH HOH A . H 4 HOH 42 342 112 HOH HOH A . H 4 HOH 43 343 12 HOH HOH A . H 4 HOH 44 344 154 HOH HOH A . H 4 HOH 45 345 23 HOH HOH A . H 4 HOH 46 346 111 HOH HOH A . H 4 HOH 47 347 33 HOH HOH A . H 4 HOH 48 348 95 HOH HOH A . H 4 HOH 49 349 10 HOH HOH A . H 4 HOH 50 350 86 HOH HOH A . H 4 HOH 51 351 37 HOH HOH A . H 4 HOH 52 352 58 HOH HOH A . H 4 HOH 53 353 189 HOH HOH A . H 4 HOH 54 354 159 HOH HOH A . H 4 HOH 55 355 25 HOH HOH A . H 4 HOH 56 356 126 HOH HOH A . H 4 HOH 57 357 229 HOH HOH A . H 4 HOH 58 358 227 HOH HOH A . H 4 HOH 59 359 13 HOH HOH A . H 4 HOH 60 360 41 HOH HOH A . H 4 HOH 61 361 8 HOH HOH A . H 4 HOH 62 362 85 HOH HOH A . H 4 HOH 63 363 36 HOH HOH A . H 4 HOH 64 364 9 HOH HOH A . H 4 HOH 65 365 147 HOH HOH A . H 4 HOH 66 366 90 HOH HOH A . H 4 HOH 67 367 29 HOH HOH A . H 4 HOH 68 368 35 HOH HOH A . H 4 HOH 69 369 143 HOH HOH A . H 4 HOH 70 370 1 HOH HOH A . H 4 HOH 71 371 48 HOH HOH A . H 4 HOH 72 372 97 HOH HOH A . H 4 HOH 73 373 168 HOH HOH A . H 4 HOH 74 374 179 HOH HOH A . H 4 HOH 75 375 230 HOH HOH A . H 4 HOH 76 376 133 HOH HOH A . H 4 HOH 77 377 144 HOH HOH A . H 4 HOH 78 378 192 HOH HOH A . H 4 HOH 79 379 21 HOH HOH A . H 4 HOH 80 380 174 HOH HOH A . H 4 HOH 81 381 52 HOH HOH A . H 4 HOH 82 382 155 HOH HOH A . H 4 HOH 83 383 43 HOH HOH A . H 4 HOH 84 384 26 HOH HOH A . H 4 HOH 85 385 102 HOH HOH A . H 4 HOH 86 386 181 HOH HOH A . H 4 HOH 87 387 197 HOH HOH A . H 4 HOH 88 388 191 HOH HOH A . H 4 HOH 89 389 120 HOH HOH A . H 4 HOH 90 390 5 HOH HOH A . H 4 HOH 91 391 187 HOH HOH A . H 4 HOH 92 392 198 HOH HOH A . H 4 HOH 93 393 110 HOH HOH A . H 4 HOH 94 394 224 HOH HOH A . H 4 HOH 95 395 158 HOH HOH A . H 4 HOH 96 396 175 HOH HOH A . H 4 HOH 97 397 164 HOH HOH A . H 4 HOH 98 398 104 HOH HOH A . H 4 HOH 99 399 185 HOH HOH A . H 4 HOH 100 400 214 HOH HOH A . H 4 HOH 101 401 96 HOH HOH A . H 4 HOH 102 402 188 HOH HOH A . H 4 HOH 103 403 100 HOH HOH A . H 4 HOH 104 404 124 HOH HOH A . H 4 HOH 105 405 140 HOH HOH A . H 4 HOH 106 406 79 HOH HOH A . H 4 HOH 107 407 182 HOH HOH A . H 4 HOH 108 408 152 HOH HOH A . H 4 HOH 109 409 207 HOH HOH A . H 4 HOH 110 410 205 HOH HOH A . H 4 HOH 111 411 218 HOH HOH A . H 4 HOH 112 412 51 HOH HOH A . H 4 HOH 113 413 204 HOH HOH A . H 4 HOH 114 414 103 HOH HOH A . H 4 HOH 115 415 222 HOH HOH A . H 4 HOH 116 416 93 HOH HOH A . H 4 HOH 117 417 210 HOH HOH A . H 4 HOH 118 418 215 HOH HOH A . H 4 HOH 119 419 172 HOH HOH A . I 4 HOH 1 301 84 HOH HOH B . I 4 HOH 2 302 173 HOH HOH B . I 4 HOH 3 303 127 HOH HOH B . I 4 HOH 4 304 199 HOH HOH B . I 4 HOH 5 305 233 HOH HOH B . I 4 HOH 6 306 92 HOH HOH B . I 4 HOH 7 307 226 HOH HOH B . I 4 HOH 8 308 128 HOH HOH B . I 4 HOH 9 309 167 HOH HOH B . I 4 HOH 10 310 146 HOH HOH B . I 4 HOH 11 311 71 HOH HOH B . I 4 HOH 12 312 201 HOH HOH B . I 4 HOH 13 313 18 HOH HOH B . I 4 HOH 14 314 132 HOH HOH B . I 4 HOH 15 315 40 HOH HOH B . I 4 HOH 16 316 162 HOH HOH B . I 4 HOH 17 317 169 HOH HOH B . I 4 HOH 18 318 121 HOH HOH B . I 4 HOH 19 319 98 HOH HOH B . I 4 HOH 20 320 64 HOH HOH B . I 4 HOH 21 321 234 HOH HOH B . I 4 HOH 22 322 45 HOH HOH B . I 4 HOH 23 323 73 HOH HOH B . I 4 HOH 24 324 20 HOH HOH B . I 4 HOH 25 325 83 HOH HOH B . I 4 HOH 26 326 46 HOH HOH B . I 4 HOH 27 327 193 HOH HOH B . I 4 HOH 28 328 47 HOH HOH B . I 4 HOH 29 329 19 HOH HOH B . I 4 HOH 30 330 15 HOH HOH B . I 4 HOH 31 331 94 HOH HOH B . I 4 HOH 32 332 38 HOH HOH B . I 4 HOH 33 333 235 HOH HOH B . I 4 HOH 34 334 75 HOH HOH B . I 4 HOH 35 335 39 HOH HOH B . I 4 HOH 36 336 65 HOH HOH B . I 4 HOH 37 337 180 HOH HOH B . I 4 HOH 38 338 236 HOH HOH B . I 4 HOH 39 339 44 HOH HOH B . I 4 HOH 40 340 113 HOH HOH B . I 4 HOH 41 341 60 HOH HOH B . I 4 HOH 42 342 161 HOH HOH B . I 4 HOH 43 343 74 HOH HOH B . I 4 HOH 44 344 134 HOH HOH B . I 4 HOH 45 345 200 HOH HOH B . I 4 HOH 46 346 67 HOH HOH B . I 4 HOH 47 347 14 HOH HOH B . I 4 HOH 48 348 157 HOH HOH B . I 4 HOH 49 349 77 HOH HOH B . I 4 HOH 50 350 62 HOH HOH B . I 4 HOH 51 351 17 HOH HOH B . I 4 HOH 52 352 32 HOH HOH B . I 4 HOH 53 353 190 HOH HOH B . I 4 HOH 54 354 4 HOH HOH B . I 4 HOH 55 355 2 HOH HOH B . I 4 HOH 56 356 156 HOH HOH B . I 4 HOH 57 357 49 HOH HOH B . I 4 HOH 58 358 72 HOH HOH B . I 4 HOH 59 359 129 HOH HOH B . I 4 HOH 60 360 66 HOH HOH B . I 4 HOH 61 361 82 HOH HOH B . I 4 HOH 62 362 142 HOH HOH B . I 4 HOH 63 363 196 HOH HOH B . I 4 HOH 64 364 109 HOH HOH B . I 4 HOH 65 365 101 HOH HOH B . I 4 HOH 66 366 125 HOH HOH B . I 4 HOH 67 367 115 HOH HOH B . I 4 HOH 68 368 54 HOH HOH B . I 4 HOH 69 369 81 HOH HOH B . I 4 HOH 70 370 219 HOH HOH B . I 4 HOH 71 371 177 HOH HOH B . I 4 HOH 72 372 206 HOH HOH B . I 4 HOH 73 373 24 HOH HOH B . I 4 HOH 74 374 56 HOH HOH B . I 4 HOH 75 375 166 HOH HOH B . I 4 HOH 76 376 87 HOH HOH B . I 4 HOH 77 377 138 HOH HOH B . I 4 HOH 78 378 3 HOH HOH B . I 4 HOH 79 379 50 HOH HOH B . I 4 HOH 80 380 108 HOH HOH B . I 4 HOH 81 381 137 HOH HOH B . I 4 HOH 82 382 203 HOH HOH B . I 4 HOH 83 383 145 HOH HOH B . I 4 HOH 84 384 63 HOH HOH B . I 4 HOH 85 385 69 HOH HOH B . I 4 HOH 86 386 89 HOH HOH B . I 4 HOH 87 387 184 HOH HOH B . I 4 HOH 88 388 42 HOH HOH B . I 4 HOH 89 389 61 HOH HOH B . I 4 HOH 90 390 7 HOH HOH B . I 4 HOH 91 391 165 HOH HOH B . I 4 HOH 92 392 141 HOH HOH B . I 4 HOH 93 393 114 HOH HOH B . I 4 HOH 94 394 119 HOH HOH B . I 4 HOH 95 395 237 HOH HOH B . I 4 HOH 96 396 232 HOH HOH B . I 4 HOH 97 397 139 HOH HOH B . I 4 HOH 98 398 220 HOH HOH B . I 4 HOH 99 399 123 HOH HOH B . I 4 HOH 100 400 171 HOH HOH B . I 4 HOH 101 401 163 HOH HOH B . I 4 HOH 102 402 209 HOH HOH B . I 4 HOH 103 403 183 HOH HOH B . I 4 HOH 104 404 170 HOH HOH B . I 4 HOH 105 405 212 HOH HOH B . I 4 HOH 106 406 153 HOH HOH B . I 4 HOH 107 407 105 HOH HOH B . I 4 HOH 108 408 213 HOH HOH B . I 4 HOH 109 409 211 HOH HOH B . I 4 HOH 110 410 131 HOH HOH B . I 4 HOH 111 411 217 HOH HOH B . I 4 HOH 112 412 186 HOH HOH B . I 4 HOH 113 413 223 HOH HOH B . I 4 HOH 114 414 208 HOH HOH B . I 4 HOH 115 415 194 HOH HOH B . I 4 HOH 116 416 221 HOH HOH B . I 4 HOH 117 417 130 HOH HOH B . I 4 HOH 118 418 118 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.7.2_869 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _cell.angle_alpha 91.28 _cell.angle_alpha_esd ? _cell.angle_beta 90.91 _cell.angle_beta_esd ? _cell.angle_gamma 114.19 _cell.angle_gamma_esd ? _cell.entry_id 5F58 _cell.details ? _cell.formula_units_Z ? _cell.length_a 30.234 _cell.length_a_esd ? _cell.length_b 35.704 _cell.length_b_esd ? _cell.length_c 64.104 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5F58 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5F58 _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.03 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30% PEG 4000, 0.1M Ammonium Acetate, 0.1M Sodium Acetate pH = 4.5' _exptl_crystal_grow.pdbx_pH_range 4-4.8 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-10-12 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0781 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0781 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-D _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5F58 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.54 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 136653 _reflns.number_obs 36188 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.1 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.9 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 31.67 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.54 _reflns_shell.d_res_low 1.57 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.17 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 94 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.468 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.4245 _refine.aniso_B[1][2] -0.0902 _refine.aniso_B[1][3] -0.1853 _refine.aniso_B[2][2] 0.5531 _refine.aniso_B[2][3] -0.0686 _refine.aniso_B[3][3] -0.9776 _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5F58 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.540 _refine.ls_d_res_low 32.553 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 34777 _refine.ls_number_reflns_R_free 1734 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.07 _refine.ls_percent_reflns_R_free 4.99 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1951 _refine.ls_R_factor_R_free 0.2288 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1934 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol 59.517 _refine.solvent_model_param_ksol 0.400 _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.99 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4EXZ _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 0.90 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.60 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.40 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.35 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2188 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 52 _refine_hist.number_atoms_solvent 237 _refine_hist.number_atoms_total 2477 _refine_hist.d_res_high 1.540 _refine_hist.d_res_low 32.553 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? 2333 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.081 ? 3164 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 15.815 ? 871 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.073 ? 342 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 412 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.5399 1.5852 . . 128 2705 93.00 . . . 0.3029 . 0.2421 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5852 1.6364 . . 141 2703 94.00 . . . 0.2533 . 0.2311 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6364 1.6949 . . 130 2726 94.00 . . . 0.2664 . 0.2173 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6949 1.7627 . . 133 2711 95.00 . . . 0.2307 . 0.2038 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7627 1.8429 . . 138 2700 95.00 . . . 0.2407 . 0.2087 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8429 1.9401 . . 152 2755 96.00 . . . 0.2553 . 0.2030 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9401 2.0616 . . 152 2764 96.00 . . . 0.2703 . 0.2035 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0616 2.2208 . . 139 2775 97.00 . . . 0.2374 . 0.1977 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2208 2.4442 . . 172 2746 97.00 . . . 0.2217 . 0.1896 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4442 2.7977 . . 147 2832 98.00 . . . 0.2355 . 0.2010 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7977 3.5241 . . 155 2791 98.00 . . . 0.2074 . 0.1743 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5241 32.5598 . . 147 2835 99.00 . . . 0.2102 . 0.1842 . . . . . . . . . . # _struct.entry_id 5F58 _struct.title ;Crystal structure of the Q108K:K40L:T51V:R58F mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal after 24 hours of incubation at 1.54 Angstrom Resolution ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5F58 _struct_keywords.text 'all-trans retinal, retinal light absorbing pigment, wavelength regulation, TRANSPORT PROTEIN' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RET2_HUMAN _struct_ref.pdbx_db_accession P50120 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRLTQTKVIDQDGDNFKTKTTSTFRNYDVDFTVGVEFDEYTKSLDNR HVKALVTWEGDVLVCVQKGEKENRGWKQWIEGDKLYLELTCGDQVCRQVFKKK ; _struct_ref.pdbx_align_begin 2 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5F58 A 1 ? 133 ? P50120 2 ? 134 ? 1 133 2 1 5F58 B 1 ? 133 ? P50120 2 ? 134 ? 1 133 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5F58 LEU A 40 ? UNP P50120 LYS 41 'engineered mutation' 40 1 1 5F58 VAL A 51 ? UNP P50120 THR 52 'engineered mutation' 51 2 1 5F58 PHE A 58 ? UNP P50120 ARG 59 'engineered mutation' 58 3 1 5F58 LYS A 108 ? UNP P50120 GLN 109 'engineered mutation' 108 4 2 5F58 LEU B 40 ? UNP P50120 LYS 41 'engineered mutation' 40 5 2 5F58 VAL B 51 ? UNP P50120 THR 52 'engineered mutation' 51 6 2 5F58 PHE B 58 ? UNP P50120 ARG 59 'engineered mutation' 58 7 2 5F58 LYS B 108 ? UNP P50120 GLN 109 'engineered mutation' 108 8 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,H 2 1 B,F,G,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 15 ? LEU A 23 ? ASN A 15 LEU A 23 1 ? 9 HELX_P HELX_P2 AA2 ASP A 26 ? VAL A 34 ? ASP A 26 VAL A 34 1 ? 9 HELX_P HELX_P3 AA3 ASN B 15 ? LEU B 23 ? ASN B 15 LEU B 23 1 ? 9 HELX_P HELX_P4 AA4 ASP B 26 ? VAL B 34 ? ASP B 26 VAL B 34 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A LYS 108 NZ ? ? ? 1_555 C RET . C15 ? ? A LYS 108 A RET 201 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale2 covale one ? B LYS 108 NZ ? ? ? 1_555 F RET . C15 ? ? B LYS 108 B RET 201 1_555 ? ? ? ? ? ? ? 1.305 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 RET C . ? LYS A 108 ? RET A 201 ? 1_555 LYS A 108 ? 1_555 C15 NZ LYS 1 RET Retinoylation Lipid/lipid-like 2 RET F . ? LYS B 108 ? RET B 201 ? 1_555 LYS B 108 ? 1_555 C15 NZ LYS 1 RET Retinoylation Lipid/lipid-like # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 10 ? AA2 ? 10 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA1 8 9 ? anti-parallel AA1 9 10 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA2 7 8 ? anti-parallel AA2 8 9 ? anti-parallel AA2 9 10 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN A 59 ? THR A 65 ? ASN A 59 THR A 65 AA1 2 ASN A 48 ? THR A 54 ? ASN A 48 THR A 54 AA1 3 THR A 39 ? ASP A 45 ? THR A 39 ASP A 45 AA1 4 GLY A 6 ? GLU A 14 ? GLY A 6 GLU A 14 AA1 5 GLN A 124 ? LYS A 132 ? GLN A 124 LYS A 132 AA1 6 LYS A 114 ? CYS A 121 ? LYS A 114 CYS A 121 AA1 7 GLY A 105 ? GLU A 111 ? GLY A 105 GLU A 111 AA1 8 VAL A 92 ? LYS A 98 ? VAL A 92 LYS A 98 AA1 9 HIS A 81 ? GLU A 89 ? HIS A 81 GLU A 89 AA1 10 PHE A 70 ? TYR A 73 ? PHE A 70 TYR A 73 AA2 1 ASN B 59 ? THR B 65 ? ASN B 59 THR B 65 AA2 2 ASN B 48 ? THR B 54 ? ASN B 48 THR B 54 AA2 3 THR B 39 ? ASP B 45 ? THR B 39 ASP B 45 AA2 4 GLY B 6 ? GLU B 14 ? GLY B 6 GLU B 14 AA2 5 GLN B 124 ? LYS B 132 ? GLN B 124 LYS B 132 AA2 6 LYS B 114 ? CYS B 121 ? LYS B 114 CYS B 121 AA2 7 GLY B 105 ? GLU B 111 ? GLY B 105 GLU B 111 AA2 8 VAL B 92 ? LYS B 98 ? VAL B 92 LYS B 98 AA2 9 HIS B 81 ? GLU B 89 ? HIS B 81 GLU B 89 AA2 10 PHE B 70 ? TYR B 73 ? PHE B 70 TYR B 73 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O PHE A 64 ? O PHE A 64 N PHE A 49 ? N PHE A 49 AA1 2 3 O LYS A 52 ? O LYS A 52 N VAL A 41 ? N VAL A 41 AA1 3 4 O LEU A 40 ? O LEU A 40 N TRP A 8 ? N TRP A 8 AA1 4 5 N GLU A 11 ? N GLU A 11 O VAL A 129 ? O VAL A 129 AA1 5 6 O GLN A 128 ? O GLN A 128 N LEU A 117 ? N LEU A 117 AA1 6 7 O TYR A 116 ? O TYR A 116 N TRP A 109 ? N TRP A 109 AA1 7 8 O TRP A 106 ? O TRP A 106 N CYS A 95 ? N CYS A 95 AA1 8 9 O VAL A 94 ? O VAL A 94 N THR A 87 ? N THR A 87 AA1 9 10 O ALA A 84 ? O ALA A 84 N PHE A 70 ? N PHE A 70 AA2 1 2 O TYR B 60 ? O TYR B 60 N THR B 53 ? N THR B 53 AA2 2 3 O LYS B 52 ? O LYS B 52 N VAL B 41 ? N VAL B 41 AA2 3 4 O LEU B 40 ? O LEU B 40 N TRP B 8 ? N TRP B 8 AA2 4 5 N GLU B 11 ? N GLU B 11 O VAL B 129 ? O VAL B 129 AA2 5 6 O PHE B 130 ? O PHE B 130 N LEU B 115 ? N LEU B 115 AA2 6 7 O TYR B 116 ? O TYR B 116 N TRP B 109 ? N TRP B 109 AA2 7 8 O LYS B 108 ? O LYS B 108 N LEU B 93 ? N LEU B 93 AA2 8 9 O VAL B 94 ? O VAL B 94 N THR B 87 ? N THR B 87 AA2 9 10 O ALA B 84 ? O ALA B 84 N PHE B 70 ? N PHE B 70 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A RET 201 ? 7 'binding site for residue RET A 201' AC2 Software A ACT 202 ? 5 'binding site for residue ACT A 202' AC3 Software A ACT 203 ? 4 'binding site for residue ACT A 203' AC4 Software B ACT 202 ? 4 'binding site for residue ACT B 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 PHE A 16 ? PHE A 16 . ? 1_555 ? 2 AC1 7 MET A 20 ? MET A 20 . ? 1_555 ? 3 AC1 7 ALA A 33 ? ALA A 33 . ? 1_555 ? 4 AC1 7 TYR A 60 ? TYR A 60 . ? 1_555 ? 5 AC1 7 LEU A 77 ? LEU A 77 . ? 1_555 ? 6 AC1 7 LYS A 108 ? LYS A 108 . ? 1_555 ? 7 AC1 7 ACT D . ? ACT A 202 . ? 1_555 ? 8 AC2 5 TYR A 60 ? TYR A 60 . ? 1_555 ? 9 AC2 5 GLU A 72 ? GLU A 72 . ? 1_555 ? 10 AC2 5 GLN A 97 ? GLN A 97 . ? 1_555 ? 11 AC2 5 TRP A 106 ? TRP A 106 . ? 1_555 ? 12 AC2 5 RET C . ? RET A 201 . ? 1_555 ? 13 AC3 4 TYR A 73 ? TYR A 73 . ? 1_455 ? 14 AC3 4 ASP A 91 ? ASP A 91 . ? 1_555 ? 15 AC3 4 TRP A 109 ? TRP A 109 . ? 1_555 ? 16 AC3 4 GLU A 111 ? GLU A 111 . ? 1_555 ? 17 AC4 4 GLU B 72 ? GLU B 72 . ? 1_555 ? 18 AC4 4 GLN B 97 ? GLN B 97 . ? 1_555 ? 19 AC4 4 TRP B 106 ? TRP B 106 . ? 1_555 ? 20 AC4 4 HOH I . ? HOH B 314 . ? 1_555 ? # _pdbx_entry_details.entry_id 5F58 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 331 ? ? O B HOH 405 ? ? 2.16 2 1 O B HOH 415 ? ? O B HOH 417 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 74 ? ? -87.60 49.72 2 1 LEU A 77 ? ? -118.93 -99.64 3 1 LYS B 75 ? ? 8.07 -111.51 4 1 LEU B 77 ? ? -100.27 -98.63 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 419 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.22 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 GLN N N N N 95 GLN CA C N S 96 GLN C C N N 97 GLN O O N N 98 GLN CB C N N 99 GLN CG C N N 100 GLN CD C N N 101 GLN OE1 O N N 102 GLN NE2 N N N 103 GLN OXT O N N 104 GLN H H N N 105 GLN H2 H N N 106 GLN HA H N N 107 GLN HB2 H N N 108 GLN HB3 H N N 109 GLN HG2 H N N 110 GLN HG3 H N N 111 GLN HE21 H N N 112 GLN HE22 H N N 113 GLN HXT H N N 114 GLU N N N N 115 GLU CA C N S 116 GLU C C N N 117 GLU O O N N 118 GLU CB C N N 119 GLU CG C N N 120 GLU CD C N N 121 GLU OE1 O N N 122 GLU OE2 O N N 123 GLU OXT O N N 124 GLU H H N N 125 GLU H2 H N N 126 GLU HA H N N 127 GLU HB2 H N N 128 GLU HB3 H N N 129 GLU HG2 H N N 130 GLU HG3 H N N 131 GLU HE2 H N N 132 GLU HXT H N N 133 GLY N N N N 134 GLY CA C N N 135 GLY C C N N 136 GLY O O N N 137 GLY OXT O N N 138 GLY H H N N 139 GLY H2 H N N 140 GLY HA2 H N N 141 GLY HA3 H N N 142 GLY HXT H N N 143 HIS N N N N 144 HIS CA C N S 145 HIS C C N N 146 HIS O O N N 147 HIS CB C N N 148 HIS CG C Y N 149 HIS ND1 N Y N 150 HIS CD2 C Y N 151 HIS CE1 C Y N 152 HIS NE2 N Y N 153 HIS OXT O N N 154 HIS H H N N 155 HIS H2 H N N 156 HIS HA H N N 157 HIS HB2 H N N 158 HIS HB3 H N N 159 HIS HD1 H N N 160 HIS HD2 H N N 161 HIS HE1 H N N 162 HIS HE2 H N N 163 HIS HXT H N N 164 HOH O O N N 165 HOH H1 H N N 166 HOH H2 H N N 167 ILE N N N N 168 ILE CA C N S 169 ILE C C N N 170 ILE O O N N 171 ILE CB C N S 172 ILE CG1 C N N 173 ILE CG2 C N N 174 ILE CD1 C N N 175 ILE OXT O N N 176 ILE H H N N 177 ILE H2 H N N 178 ILE HA H N N 179 ILE HB H N N 180 ILE HG12 H N N 181 ILE HG13 H N N 182 ILE HG21 H N N 183 ILE HG22 H N N 184 ILE HG23 H N N 185 ILE HD11 H N N 186 ILE HD12 H N N 187 ILE HD13 H N N 188 ILE HXT H N N 189 LEU N N N N 190 LEU CA C N S 191 LEU C C N N 192 LEU O O N N 193 LEU CB C N N 194 LEU CG C N N 195 LEU CD1 C N N 196 LEU CD2 C N N 197 LEU OXT O N N 198 LEU H H N N 199 LEU H2 H N N 200 LEU HA H N N 201 LEU HB2 H N N 202 LEU HB3 H N N 203 LEU HG H N N 204 LEU HD11 H N N 205 LEU HD12 H N N 206 LEU HD13 H N N 207 LEU HD21 H N N 208 LEU HD22 H N N 209 LEU HD23 H N N 210 LEU HXT H N N 211 LYS N N N N 212 LYS CA C N S 213 LYS C C N N 214 LYS O O N N 215 LYS CB C N N 216 LYS CG C N N 217 LYS CD C N N 218 LYS CE C N N 219 LYS NZ N N N 220 LYS OXT O N N 221 LYS H H N N 222 LYS H2 H N N 223 LYS HA H N N 224 LYS HB2 H N N 225 LYS HB3 H N N 226 LYS HG2 H N N 227 LYS HG3 H N N 228 LYS HD2 H N N 229 LYS HD3 H N N 230 LYS HE2 H N N 231 LYS HE3 H N N 232 LYS HZ1 H N N 233 LYS HZ2 H N N 234 LYS HZ3 H N N 235 LYS HXT H N N 236 MET N N N N 237 MET CA C N S 238 MET C C N N 239 MET O O N N 240 MET CB C N N 241 MET CG C N N 242 MET SD S N N 243 MET CE C N N 244 MET OXT O N N 245 MET H H N N 246 MET H2 H N N 247 MET HA H N N 248 MET HB2 H N N 249 MET HB3 H N N 250 MET HG2 H N N 251 MET HG3 H N N 252 MET HE1 H N N 253 MET HE2 H N N 254 MET HE3 H N N 255 MET HXT H N N 256 PHE N N N N 257 PHE CA C N S 258 PHE C C N N 259 PHE O O N N 260 PHE CB C N N 261 PHE CG C Y N 262 PHE CD1 C Y N 263 PHE CD2 C Y N 264 PHE CE1 C Y N 265 PHE CE2 C Y N 266 PHE CZ C Y N 267 PHE OXT O N N 268 PHE H H N N 269 PHE H2 H N N 270 PHE HA H N N 271 PHE HB2 H N N 272 PHE HB3 H N N 273 PHE HD1 H N N 274 PHE HD2 H N N 275 PHE HE1 H N N 276 PHE HE2 H N N 277 PHE HZ H N N 278 PHE HXT H N N 279 RET C1 C N N 280 RET C2 C N N 281 RET C3 C N N 282 RET C4 C N N 283 RET C5 C N N 284 RET C6 C N N 285 RET C7 C N N 286 RET C8 C N N 287 RET C9 C N N 288 RET C10 C N N 289 RET C11 C N N 290 RET C12 C N N 291 RET C13 C N N 292 RET C14 C N N 293 RET C15 C N N 294 RET O1 O N N 295 RET C16 C N N 296 RET C17 C N N 297 RET C18 C N N 298 RET C19 C N N 299 RET C20 C N N 300 RET H21 H N N 301 RET H22 H N N 302 RET H31 H N N 303 RET H32 H N N 304 RET H41 H N N 305 RET H42 H N N 306 RET H7 H N N 307 RET H8 H N N 308 RET H10 H N N 309 RET H11 H N N 310 RET H12 H N N 311 RET H14 H N N 312 RET H15 H N N 313 RET H161 H N N 314 RET H162 H N N 315 RET H163 H N N 316 RET H171 H N N 317 RET H172 H N N 318 RET H173 H N N 319 RET H181 H N N 320 RET H182 H N N 321 RET H183 H N N 322 RET H191 H N N 323 RET H192 H N N 324 RET H193 H N N 325 RET H201 H N N 326 RET H202 H N N 327 RET H203 H N N 328 SER N N N N 329 SER CA C N S 330 SER C C N N 331 SER O O N N 332 SER CB C N N 333 SER OG O N N 334 SER OXT O N N 335 SER H H N N 336 SER H2 H N N 337 SER HA H N N 338 SER HB2 H N N 339 SER HB3 H N N 340 SER HG H N N 341 SER HXT H N N 342 THR N N N N 343 THR CA C N S 344 THR C C N N 345 THR O O N N 346 THR CB C N R 347 THR OG1 O N N 348 THR CG2 C N N 349 THR OXT O N N 350 THR H H N N 351 THR H2 H N N 352 THR HA H N N 353 THR HB H N N 354 THR HG1 H N N 355 THR HG21 H N N 356 THR HG22 H N N 357 THR HG23 H N N 358 THR HXT H N N 359 TRP N N N N 360 TRP CA C N S 361 TRP C C N N 362 TRP O O N N 363 TRP CB C N N 364 TRP CG C Y N 365 TRP CD1 C Y N 366 TRP CD2 C Y N 367 TRP NE1 N Y N 368 TRP CE2 C Y N 369 TRP CE3 C Y N 370 TRP CZ2 C Y N 371 TRP CZ3 C Y N 372 TRP CH2 C Y N 373 TRP OXT O N N 374 TRP H H N N 375 TRP H2 H N N 376 TRP HA H N N 377 TRP HB2 H N N 378 TRP HB3 H N N 379 TRP HD1 H N N 380 TRP HE1 H N N 381 TRP HE3 H N N 382 TRP HZ2 H N N 383 TRP HZ3 H N N 384 TRP HH2 H N N 385 TRP HXT H N N 386 TYR N N N N 387 TYR CA C N S 388 TYR C C N N 389 TYR O O N N 390 TYR CB C N N 391 TYR CG C Y N 392 TYR CD1 C Y N 393 TYR CD2 C Y N 394 TYR CE1 C Y N 395 TYR CE2 C Y N 396 TYR CZ C Y N 397 TYR OH O N N 398 TYR OXT O N N 399 TYR H H N N 400 TYR H2 H N N 401 TYR HA H N N 402 TYR HB2 H N N 403 TYR HB3 H N N 404 TYR HD1 H N N 405 TYR HD2 H N N 406 TYR HE1 H N N 407 TYR HE2 H N N 408 TYR HH H N N 409 TYR HXT H N N 410 VAL N N N N 411 VAL CA C N S 412 VAL C C N N 413 VAL O O N N 414 VAL CB C N N 415 VAL CG1 C N N 416 VAL CG2 C N N 417 VAL OXT O N N 418 VAL H H N N 419 VAL H2 H N N 420 VAL HA H N N 421 VAL HB H N N 422 VAL HG11 H N N 423 VAL HG12 H N N 424 VAL HG13 H N N 425 VAL HG21 H N N 426 VAL HG22 H N N 427 VAL HG23 H N N 428 VAL HXT H N N 429 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 GLN N CA sing N N 89 GLN N H sing N N 90 GLN N H2 sing N N 91 GLN CA C sing N N 92 GLN CA CB sing N N 93 GLN CA HA sing N N 94 GLN C O doub N N 95 GLN C OXT sing N N 96 GLN CB CG sing N N 97 GLN CB HB2 sing N N 98 GLN CB HB3 sing N N 99 GLN CG CD sing N N 100 GLN CG HG2 sing N N 101 GLN CG HG3 sing N N 102 GLN CD OE1 doub N N 103 GLN CD NE2 sing N N 104 GLN NE2 HE21 sing N N 105 GLN NE2 HE22 sing N N 106 GLN OXT HXT sing N N 107 GLU N CA sing N N 108 GLU N H sing N N 109 GLU N H2 sing N N 110 GLU CA C sing N N 111 GLU CA CB sing N N 112 GLU CA HA sing N N 113 GLU C O doub N N 114 GLU C OXT sing N N 115 GLU CB CG sing N N 116 GLU CB HB2 sing N N 117 GLU CB HB3 sing N N 118 GLU CG CD sing N N 119 GLU CG HG2 sing N N 120 GLU CG HG3 sing N N 121 GLU CD OE1 doub N N 122 GLU CD OE2 sing N N 123 GLU OE2 HE2 sing N N 124 GLU OXT HXT sing N N 125 GLY N CA sing N N 126 GLY N H sing N N 127 GLY N H2 sing N N 128 GLY CA C sing N N 129 GLY CA HA2 sing N N 130 GLY CA HA3 sing N N 131 GLY C O doub N N 132 GLY C OXT sing N N 133 GLY OXT HXT sing N N 134 HIS N CA sing N N 135 HIS N H sing N N 136 HIS N H2 sing N N 137 HIS CA C sing N N 138 HIS CA CB sing N N 139 HIS CA HA sing N N 140 HIS C O doub N N 141 HIS C OXT sing N N 142 HIS CB CG sing N N 143 HIS CB HB2 sing N N 144 HIS CB HB3 sing N N 145 HIS CG ND1 sing Y N 146 HIS CG CD2 doub Y N 147 HIS ND1 CE1 doub Y N 148 HIS ND1 HD1 sing N N 149 HIS CD2 NE2 sing Y N 150 HIS CD2 HD2 sing N N 151 HIS CE1 NE2 sing Y N 152 HIS CE1 HE1 sing N N 153 HIS NE2 HE2 sing N N 154 HIS OXT HXT sing N N 155 HOH O H1 sing N N 156 HOH O H2 sing N N 157 ILE N CA sing N N 158 ILE N H sing N N 159 ILE N H2 sing N N 160 ILE CA C sing N N 161 ILE CA CB sing N N 162 ILE CA HA sing N N 163 ILE C O doub N N 164 ILE C OXT sing N N 165 ILE CB CG1 sing N N 166 ILE CB CG2 sing N N 167 ILE CB HB sing N N 168 ILE CG1 CD1 sing N N 169 ILE CG1 HG12 sing N N 170 ILE CG1 HG13 sing N N 171 ILE CG2 HG21 sing N N 172 ILE CG2 HG22 sing N N 173 ILE CG2 HG23 sing N N 174 ILE CD1 HD11 sing N N 175 ILE CD1 HD12 sing N N 176 ILE CD1 HD13 sing N N 177 ILE OXT HXT sing N N 178 LEU N CA sing N N 179 LEU N H sing N N 180 LEU N H2 sing N N 181 LEU CA C sing N N 182 LEU CA CB sing N N 183 LEU CA HA sing N N 184 LEU C O doub N N 185 LEU C OXT sing N N 186 LEU CB CG sing N N 187 LEU CB HB2 sing N N 188 LEU CB HB3 sing N N 189 LEU CG CD1 sing N N 190 LEU CG CD2 sing N N 191 LEU CG HG sing N N 192 LEU CD1 HD11 sing N N 193 LEU CD1 HD12 sing N N 194 LEU CD1 HD13 sing N N 195 LEU CD2 HD21 sing N N 196 LEU CD2 HD22 sing N N 197 LEU CD2 HD23 sing N N 198 LEU OXT HXT sing N N 199 LYS N CA sing N N 200 LYS N H sing N N 201 LYS N H2 sing N N 202 LYS CA C sing N N 203 LYS CA CB sing N N 204 LYS CA HA sing N N 205 LYS C O doub N N 206 LYS C OXT sing N N 207 LYS CB CG sing N N 208 LYS CB HB2 sing N N 209 LYS CB HB3 sing N N 210 LYS CG CD sing N N 211 LYS CG HG2 sing N N 212 LYS CG HG3 sing N N 213 LYS CD CE sing N N 214 LYS CD HD2 sing N N 215 LYS CD HD3 sing N N 216 LYS CE NZ sing N N 217 LYS CE HE2 sing N N 218 LYS CE HE3 sing N N 219 LYS NZ HZ1 sing N N 220 LYS NZ HZ2 sing N N 221 LYS NZ HZ3 sing N N 222 LYS OXT HXT sing N N 223 MET N CA sing N N 224 MET N H sing N N 225 MET N H2 sing N N 226 MET CA C sing N N 227 MET CA CB sing N N 228 MET CA HA sing N N 229 MET C O doub N N 230 MET C OXT sing N N 231 MET CB CG sing N N 232 MET CB HB2 sing N N 233 MET CB HB3 sing N N 234 MET CG SD sing N N 235 MET CG HG2 sing N N 236 MET CG HG3 sing N N 237 MET SD CE sing N N 238 MET CE HE1 sing N N 239 MET CE HE2 sing N N 240 MET CE HE3 sing N N 241 MET OXT HXT sing N N 242 PHE N CA sing N N 243 PHE N H sing N N 244 PHE N H2 sing N N 245 PHE CA C sing N N 246 PHE CA CB sing N N 247 PHE CA HA sing N N 248 PHE C O doub N N 249 PHE C OXT sing N N 250 PHE CB CG sing N N 251 PHE CB HB2 sing N N 252 PHE CB HB3 sing N N 253 PHE CG CD1 doub Y N 254 PHE CG CD2 sing Y N 255 PHE CD1 CE1 sing Y N 256 PHE CD1 HD1 sing N N 257 PHE CD2 CE2 doub Y N 258 PHE CD2 HD2 sing N N 259 PHE CE1 CZ doub Y N 260 PHE CE1 HE1 sing N N 261 PHE CE2 CZ sing Y N 262 PHE CE2 HE2 sing N N 263 PHE CZ HZ sing N N 264 PHE OXT HXT sing N N 265 RET C1 C2 sing N N 266 RET C1 C6 sing N N 267 RET C1 C16 sing N N 268 RET C1 C17 sing N N 269 RET C2 C3 sing N N 270 RET C2 H21 sing N N 271 RET C2 H22 sing N N 272 RET C3 C4 sing N N 273 RET C3 H31 sing N N 274 RET C3 H32 sing N N 275 RET C4 C5 sing N N 276 RET C4 H41 sing N N 277 RET C4 H42 sing N N 278 RET C5 C6 doub N N 279 RET C5 C18 sing N N 280 RET C6 C7 sing N N 281 RET C7 C8 doub N E 282 RET C7 H7 sing N N 283 RET C8 C9 sing N N 284 RET C8 H8 sing N N 285 RET C9 C10 doub N E 286 RET C9 C19 sing N N 287 RET C10 C11 sing N N 288 RET C10 H10 sing N N 289 RET C11 C12 doub N E 290 RET C11 H11 sing N N 291 RET C12 C13 sing N N 292 RET C12 H12 sing N N 293 RET C13 C14 doub N E 294 RET C13 C20 sing N N 295 RET C14 C15 sing N N 296 RET C14 H14 sing N N 297 RET C15 O1 doub N N 298 RET C15 H15 sing N N 299 RET C16 H161 sing N N 300 RET C16 H162 sing N N 301 RET C16 H163 sing N N 302 RET C17 H171 sing N N 303 RET C17 H172 sing N N 304 RET C17 H173 sing N N 305 RET C18 H181 sing N N 306 RET C18 H182 sing N N 307 RET C18 H183 sing N N 308 RET C19 H191 sing N N 309 RET C19 H192 sing N N 310 RET C19 H193 sing N N 311 RET C20 H201 sing N N 312 RET C20 H202 sing N N 313 RET C20 H203 sing N N 314 SER N CA sing N N 315 SER N H sing N N 316 SER N H2 sing N N 317 SER CA C sing N N 318 SER CA CB sing N N 319 SER CA HA sing N N 320 SER C O doub N N 321 SER C OXT sing N N 322 SER CB OG sing N N 323 SER CB HB2 sing N N 324 SER CB HB3 sing N N 325 SER OG HG sing N N 326 SER OXT HXT sing N N 327 THR N CA sing N N 328 THR N H sing N N 329 THR N H2 sing N N 330 THR CA C sing N N 331 THR CA CB sing N N 332 THR CA HA sing N N 333 THR C O doub N N 334 THR C OXT sing N N 335 THR CB OG1 sing N N 336 THR CB CG2 sing N N 337 THR CB HB sing N N 338 THR OG1 HG1 sing N N 339 THR CG2 HG21 sing N N 340 THR CG2 HG22 sing N N 341 THR CG2 HG23 sing N N 342 THR OXT HXT sing N N 343 TRP N CA sing N N 344 TRP N H sing N N 345 TRP N H2 sing N N 346 TRP CA C sing N N 347 TRP CA CB sing N N 348 TRP CA HA sing N N 349 TRP C O doub N N 350 TRP C OXT sing N N 351 TRP CB CG sing N N 352 TRP CB HB2 sing N N 353 TRP CB HB3 sing N N 354 TRP CG CD1 doub Y N 355 TRP CG CD2 sing Y N 356 TRP CD1 NE1 sing Y N 357 TRP CD1 HD1 sing N N 358 TRP CD2 CE2 doub Y N 359 TRP CD2 CE3 sing Y N 360 TRP NE1 CE2 sing Y N 361 TRP NE1 HE1 sing N N 362 TRP CE2 CZ2 sing Y N 363 TRP CE3 CZ3 doub Y N 364 TRP CE3 HE3 sing N N 365 TRP CZ2 CH2 doub Y N 366 TRP CZ2 HZ2 sing N N 367 TRP CZ3 CH2 sing Y N 368 TRP CZ3 HZ3 sing N N 369 TRP CH2 HH2 sing N N 370 TRP OXT HXT sing N N 371 TYR N CA sing N N 372 TYR N H sing N N 373 TYR N H2 sing N N 374 TYR CA C sing N N 375 TYR CA CB sing N N 376 TYR CA HA sing N N 377 TYR C O doub N N 378 TYR C OXT sing N N 379 TYR CB CG sing N N 380 TYR CB HB2 sing N N 381 TYR CB HB3 sing N N 382 TYR CG CD1 doub Y N 383 TYR CG CD2 sing Y N 384 TYR CD1 CE1 sing Y N 385 TYR CD1 HD1 sing N N 386 TYR CD2 CE2 doub Y N 387 TYR CD2 HD2 sing N N 388 TYR CE1 CZ doub Y N 389 TYR CE1 HE1 sing N N 390 TYR CE2 CZ sing Y N 391 TYR CE2 HE2 sing N N 392 TYR CZ OH sing N N 393 TYR OH HH sing N N 394 TYR OXT HXT sing N N 395 VAL N CA sing N N 396 VAL N H sing N N 397 VAL N H2 sing N N 398 VAL CA C sing N N 399 VAL CA CB sing N N 400 VAL CA HA sing N N 401 VAL C O doub N N 402 VAL C OXT sing N N 403 VAL CB CG1 sing N N 404 VAL CB CG2 sing N N 405 VAL CB HB sing N N 406 VAL CG1 HG11 sing N N 407 VAL CG1 HG12 sing N N 408 VAL CG1 HG13 sing N N 409 VAL CG2 HG21 sing N N 410 VAL CG2 HG22 sing N N 411 VAL CG2 HG23 sing N N 412 VAL OXT HXT sing N N 413 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4EXZ _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5F58 _atom_sites.fract_transf_matrix[1][1] 0.033075 _atom_sites.fract_transf_matrix[1][2] 0.014858 _atom_sites.fract_transf_matrix[1][3] 0.000998 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.030704 _atom_sites.fract_transf_matrix[2][3] 0.000974 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015609 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_