HEADER OXIDOREDUCTASE 04-DEC-15 5F5N TITLE THE STRUCTURE OF MONOOXYGENASE KSTA11 IN COMPLEX WITH NAD AND ITS TITLE 2 SUBSTRATE CAVEAT 5F5N LIGAND EPE B 308 HAS WEAK ELECTRON DENSITY. COMPND MOL_ID: 1; COMPND 2 MOLECULE: MONOOXYGENASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 5-293; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MICROMONOSPORA SP. TP-A0468; SOURCE 3 ORGANISM_TAXID: 1182970; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD(DE3)PLYSS AG; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET37B KEYWDS MONOOXYGENASE, COMPLEX, KOSINOSTATIN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR L.PAN,Y.GONG REVDAT 4 08-NOV-23 5F5N 1 REMARK REVDAT 3 01-MAR-17 5F5N 1 JRNL REVDAT 2 08-FEB-17 5F5N 1 JRNL REVDAT 1 21-DEC-16 5F5N 0 JRNL AUTH Z.ZHANG,Y.-K.GONG,Q.ZHOU,Y.HU,H.-M.MA,Y.-S.CHEN,Y.IGARASHI, JRNL AUTH 2 L.PAN,G.-L.TANG JRNL TITL HYDROXYL REGIOISOMERIZATION OF ANTHRACYCLINE CATALYZED BY A JRNL TITL 2 FOUR-ENZYME CASCADE JRNL REF PROC. NATL. ACAD. SCI. V. 114 1554 2017 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 28137838 JRNL DOI 10.1073/PNAS.1610097114 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 159464 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.145 REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.166 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 7998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.1141 - 4.0497 0.94 5090 314 0.1645 0.1686 REMARK 3 2 4.0497 - 3.2155 0.98 5137 285 0.1432 0.1539 REMARK 3 3 3.2155 - 2.8093 0.99 5158 249 0.1547 0.1641 REMARK 3 4 2.8093 - 2.5526 1.00 5130 278 0.1515 0.1836 REMARK 3 5 2.5526 - 2.3697 1.00 5151 264 0.1570 0.1665 REMARK 3 6 2.3697 - 2.2300 1.00 5109 288 0.1476 0.1610 REMARK 3 7 2.2300 - 2.1184 1.00 5094 268 0.1399 0.1717 REMARK 3 8 2.1184 - 2.0262 1.00 5091 274 0.1457 0.1638 REMARK 3 9 2.0262 - 1.9482 1.00 5048 295 0.1417 0.1534 REMARK 3 10 1.9482 - 1.8810 1.00 5112 279 0.1373 0.1583 REMARK 3 11 1.8810 - 1.8222 1.00 5038 293 0.1311 0.1521 REMARK 3 12 1.8222 - 1.7701 1.00 5083 252 0.1359 0.1771 REMARK 3 13 1.7701 - 1.7235 1.00 5123 261 0.1337 0.1582 REMARK 3 14 1.7235 - 1.6814 1.00 5079 252 0.1285 0.1680 REMARK 3 15 1.6814 - 1.6432 1.00 5054 278 0.1231 0.1682 REMARK 3 16 1.6432 - 1.6082 1.00 5053 244 0.1244 0.1647 REMARK 3 17 1.6082 - 1.5761 1.00 5042 296 0.1234 0.1507 REMARK 3 18 1.5761 - 1.5463 1.00 5084 243 0.1214 0.1529 REMARK 3 19 1.5463 - 1.5187 1.00 5069 246 0.1201 0.1514 REMARK 3 20 1.5187 - 1.4930 1.00 5023 263 0.1176 0.1500 REMARK 3 21 1.4930 - 1.4689 1.00 5040 269 0.1252 0.1650 REMARK 3 22 1.4689 - 1.4463 1.00 5051 264 0.1325 0.1699 REMARK 3 23 1.4463 - 1.4250 1.00 5052 261 0.1376 0.1829 REMARK 3 24 1.4250 - 1.4050 1.00 5034 259 0.1350 0.1831 REMARK 3 25 1.4050 - 1.3860 1.00 5082 261 0.1305 0.1701 REMARK 3 26 1.3860 - 1.3680 1.00 5018 251 0.1344 0.1801 REMARK 3 27 1.3680 - 1.3509 1.00 5024 275 0.1481 0.1952 REMARK 3 28 1.3509 - 1.3346 1.00 5030 255 0.1537 0.2090 REMARK 3 29 1.3346 - 1.3191 1.00 4964 273 0.1600 0.2093 REMARK 3 30 1.3191 - 1.3043 0.86 4403 208 0.1689 0.1995 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.55 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4833 REMARK 3 ANGLE : 1.194 6643 REMARK 3 CHIRALITY : 0.077 740 REMARK 3 PLANARITY : 0.006 848 REMARK 3 DIHEDRAL : 13.059 1750 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5F5N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000216058. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 159744 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.38600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5F5L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MAGNESIUM CHLORIDE HEXAHYDRATE,HEPES, REMARK 280 POLYACRYLIC ACID SODIUM SALT 5100, PH 7.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.23800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.15950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.01250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 88.15950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.23800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.01250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 619 O HOH A 702 2.02 REMARK 500 O HOH A 405 O HOH A 538 2.08 REMARK 500 O ARG B 291 O HOH B 401 2.09 REMARK 500 O HOH B 653 O HOH B 742 2.15 REMARK 500 O HOH A 569 O HOH A 645 2.15 REMARK 500 O HOH B 742 O HOH B 837 2.15 REMARK 500 O HOH B 422 O HOH B 748 2.16 REMARK 500 O HOH A 408 O HOH A 688 2.17 REMARK 500 O HOH A 411 O HOH A 704 2.17 REMARK 500 O HOH B 736 O HOH B 824 2.17 REMARK 500 O HOH A 402 O HOH A 530 2.18 REMARK 500 O HOH A 406 O HOH A 557 2.18 REMARK 500 O HOH B 638 O HOH B 837 2.18 REMARK 500 O HOH A 732 O HOH A 753 2.19 REMARK 500 O HOH A 536 O HOH A 854 2.19 REMARK 500 O HOH A 879 O HOH B 636 2.19 REMARK 500 O HOH A 832 O HOH A 854 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 113 -129.92 -106.30 REMARK 500 THR A 149 -153.22 -94.69 REMARK 500 ASP A 262 -89.67 -137.43 REMARK 500 ALA A 265 34.73 -144.59 REMARK 500 SER B 113 -128.59 -105.45 REMARK 500 THR B 149 -153.70 -94.42 REMARK 500 ASP B 262 -84.43 -136.47 REMARK 500 ALA B 265 37.07 -145.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 926 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH A 927 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH A 928 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH A 929 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH A 930 DISTANCE = 7.03 ANGSTROMS REMARK 525 HOH B 904 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH B 905 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH B 906 DISTANCE = 6.32 ANGSTROMS REMARK 525 HOH B 907 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH B 908 DISTANCE = 6.72 ANGSTROMS REMARK 525 HOH B 909 DISTANCE = 6.77 ANGSTROMS REMARK 525 HOH B 910 DISTANCE = 6.86 ANGSTROMS REMARK 525 HOH B 911 DISTANCE = 8.85 ANGSTROMS REMARK 525 HOH B 912 DISTANCE = 9.95 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 310 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 612 O REMARK 620 2 HOH B 640 O 132.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5VD A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5VD B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE B 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE B 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 310 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5F5L RELATED DB: PDB DBREF1 5F5N A 5 293 UNP A0A023GUL3_9ACTN DBREF2 5F5N A A0A023GUL3 5 293 DBREF1 5F5N B 5 293 UNP A0A023GUL3_9ACTN DBREF2 5F5N B A0A023GUL3 5 293 SEQRES 1 A 289 ASN ARG THR ILE LEU VAL THR GLY ALA THR GLY THR GLN SEQRES 2 A 289 GLY GLY ALA THR VAL ARG ALA LEU LEU ALA ARG GLY ARG SEQRES 3 A 289 PRO VAL ARG ALA LEU VAL ARG ASP PRO GLY THR ASP ALA SEQRES 4 A 289 ALA ARG ALA LEU ALA ALA ALA GLY VAL SER LEU VAL THR SEQRES 5 A 289 GLY ASP LEU ASN ASP GLN ALA SER LEU ARG ALA ALA MET SEQRES 6 A 289 ALA ASP VAL HIS GLY VAL PHE SER VAL GLN THR PHE MET SEQRES 7 A 289 THR PRO GLY GLY LEU GLY ALA GLU LEU ARG GLN GLY ARG SEQRES 8 A 289 ALA VAL ALA ASP ALA ALA ALA ALA THR GLY VAL ARG HIS SEQRES 9 A 289 VAL VAL TYR SER SER VAL GLY GLY ALA ASP ARG ALA SER SEQRES 10 A 289 GLY VAL PRO HIS PHE GLU THR LYS TRP THR ILE GLU ARG SEQRES 11 A 289 HIS LEU ARG SER LEU GLY VAL PRO THR THR VAL LEU ARG SEQRES 12 A 289 PRO THR PHE PHE MET ASP ASN PHE ALA ALA TRP GLY PRO SEQRES 13 A 289 GLN ALA VAL ASP GLY THR LEU VAL VAL ARG LEU PRO LEU SEQRES 14 A 289 LYS PRO GLN THR ARG VAL GLN LEU ILE ALA ALA GLU ASP SEQRES 15 A 289 ILE GLY VAL PHE ALA ALA THR ALA PHE ASP ASP PRO ASP SEQRES 16 A 289 THR TYR VAL GLY ALA ALA LEU GLU LEU ALA GLY ASP GLU SEQRES 17 A 289 LEU THR GLY PRO GLU LEU ALA ALA ARG PHE GLY GLU LEU SEQRES 18 A 289 ALA GLY MET PRO ALA ARG PHE GLU GLU ARG SER LEU ASP SEQRES 19 A 289 GLU ALA ALA ALA ASP PRO TRP ILE PRO TYR SER HIS GLU SEQRES 20 A 289 ILE ALA VAL MET PHE GLU TRP PHE GLN THR ASP GLY TYR SEQRES 21 A 289 ALA ALA ASP ILE ALA ALA LEU ARG ALA ARG HIS PRO GLY SEQRES 22 A 289 LEU ARG THR PHE ALA ASP TRP LEU ARG ALA ILE GLY TRP SEQRES 23 A 289 ARG VAL PRO SEQRES 1 B 289 ASN ARG THR ILE LEU VAL THR GLY ALA THR GLY THR GLN SEQRES 2 B 289 GLY GLY ALA THR VAL ARG ALA LEU LEU ALA ARG GLY ARG SEQRES 3 B 289 PRO VAL ARG ALA LEU VAL ARG ASP PRO GLY THR ASP ALA SEQRES 4 B 289 ALA ARG ALA LEU ALA ALA ALA GLY VAL SER LEU VAL THR SEQRES 5 B 289 GLY ASP LEU ASN ASP GLN ALA SER LEU ARG ALA ALA MET SEQRES 6 B 289 ALA ASP VAL HIS GLY VAL PHE SER VAL GLN THR PHE MET SEQRES 7 B 289 THR PRO GLY GLY LEU GLY ALA GLU LEU ARG GLN GLY ARG SEQRES 8 B 289 ALA VAL ALA ASP ALA ALA ALA ALA THR GLY VAL ARG HIS SEQRES 9 B 289 VAL VAL TYR SER SER VAL GLY GLY ALA ASP ARG ALA SER SEQRES 10 B 289 GLY VAL PRO HIS PHE GLU THR LYS TRP THR ILE GLU ARG SEQRES 11 B 289 HIS LEU ARG SER LEU GLY VAL PRO THR THR VAL LEU ARG SEQRES 12 B 289 PRO THR PHE PHE MET ASP ASN PHE ALA ALA TRP GLY PRO SEQRES 13 B 289 GLN ALA VAL ASP GLY THR LEU VAL VAL ARG LEU PRO LEU SEQRES 14 B 289 LYS PRO GLN THR ARG VAL GLN LEU ILE ALA ALA GLU ASP SEQRES 15 B 289 ILE GLY VAL PHE ALA ALA THR ALA PHE ASP ASP PRO ASP SEQRES 16 B 289 THR TYR VAL GLY ALA ALA LEU GLU LEU ALA GLY ASP GLU SEQRES 17 B 289 LEU THR GLY PRO GLU LEU ALA ALA ARG PHE GLY GLU LEU SEQRES 18 B 289 ALA GLY MET PRO ALA ARG PHE GLU GLU ARG SER LEU ASP SEQRES 19 B 289 GLU ALA ALA ALA ASP PRO TRP ILE PRO TYR SER HIS GLU SEQRES 20 B 289 ILE ALA VAL MET PHE GLU TRP PHE GLN THR ASP GLY TYR SEQRES 21 B 289 ALA ALA ASP ILE ALA ALA LEU ARG ALA ARG HIS PRO GLY SEQRES 22 B 289 LEU ARG THR PHE ALA ASP TRP LEU ARG ALA ILE GLY TRP SEQRES 23 B 289 ARG VAL PRO HET NAD A 301 44 HET 5VD A 302 30 HET GOL A 303 6 HET GOL A 304 6 HET GOL A 305 6 HET GOL A 306 6 HET GOL A 307 6 HET NAD B 301 44 HET 5VD B 302 30 HET GOL B 303 6 HET GOL B 304 6 HET GOL B 305 6 HET GOL B 306 6 HET GOL B 307 6 HET EPE B 308 15 HET EPE B 309 15 HET MG B 310 1 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 5VD METHYL (1~{R},2~{R},4~{S})-2-METHYL-2,4,5,7,10- HETNAM 2 5VD PENTAKIS(OXIDANYL)-6,11-BIS(OXIDANYLIDENE)-3,4- HETNAM 3 5VD DIHYDRO-1~{H}-TETRACENE-1-CARBOXYLATE HETNAM GOL GLYCEROL HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM MG MAGNESIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EPE HEPES FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 5VD 2(C21 H18 O9) FORMUL 5 GOL 10(C3 H8 O3) FORMUL 17 EPE 2(C8 H18 N2 O4 S) FORMUL 19 MG MG 2+ FORMUL 20 HOH *1042(H2 O) HELIX 1 AA1 GLY A 15 ARG A 28 1 14 HELIX 2 AA2 THR A 41 ALA A 50 1 10 HELIX 3 AA3 ASP A 61 MET A 69 1 9 HELIX 4 AA4 GLY A 85 GLY A 105 1 21 HELIX 5 AA5 GLY A 116 ALA A 120 5 5 HELIX 6 AA6 VAL A 123 GLY A 140 1 18 HELIX 7 AA7 ASP A 153 ALA A 157 5 5 HELIX 8 AA8 ALA A 183 ASP A 197 1 15 HELIX 9 AA9 ASP A 197 VAL A 202 1 6 HELIX 10 AB1 GLY A 215 GLY A 227 1 13 HELIX 11 AB2 SER A 236 ASP A 243 1 8 HELIX 12 AB3 TYR A 248 ASP A 262 1 15 HELIX 13 AB4 ASP A 267 HIS A 275 1 9 HELIX 14 AB5 THR A 280 GLY A 289 1 10 HELIX 15 AB6 GLY B 15 GLY B 29 1 15 HELIX 16 AB7 THR B 41 ALA B 50 1 10 HELIX 17 AB8 ASP B 61 MET B 69 1 9 HELIX 18 AB9 GLY B 85 GLY B 105 1 21 HELIX 19 AC1 GLY B 116 ALA B 120 5 5 HELIX 20 AC2 VAL B 123 GLY B 140 1 18 HELIX 21 AC3 ASP B 153 ALA B 157 5 5 HELIX 22 AC4 ALA B 183 ASP B 197 1 15 HELIX 23 AC5 ASP B 197 VAL B 202 1 6 HELIX 24 AC6 GLY B 215 GLY B 227 1 13 HELIX 25 AC7 SER B 236 ASP B 243 1 8 HELIX 26 AC8 TYR B 248 ASP B 262 1 15 HELIX 27 AC9 ASP B 267 HIS B 275 1 9 HELIX 28 AD1 THR B 280 GLY B 289 1 10 SHEET 1 AA1 7 SER A 53 THR A 56 0 SHEET 2 AA1 7 VAL A 32 VAL A 36 1 N ALA A 34 O SER A 53 SHEET 3 AA1 7 ILE A 8 VAL A 10 1 N VAL A 10 O ARG A 33 SHEET 4 AA1 7 GLY A 74 SER A 77 1 O GLY A 74 N LEU A 9 SHEET 5 AA1 7 HIS A 108 SER A 112 1 O VAL A 110 N SER A 77 SHEET 6 AA1 7 THR A 143 PRO A 148 1 O THR A 144 N TYR A 111 SHEET 7 AA1 7 ALA A 205 LEU A 208 1 O LEU A 206 N ARG A 147 SHEET 1 AA2 3 PHE A 150 PHE A 151 0 SHEET 2 AA2 3 ARG A 178 ILE A 182 1 O ILE A 182 N PHE A 150 SHEET 3 AA2 3 ASP A 211 THR A 214 -1 O LEU A 213 N VAL A 179 SHEET 1 AA3 3 GLN A 161 VAL A 163 0 SHEET 2 AA3 3 THR A 166 LEU A 171 -1 O THR A 166 N VAL A 163 SHEET 3 AA3 3 ALA A 230 GLU A 234 1 O ARG A 231 N LEU A 167 SHEET 1 AA4 7 SER B 53 THR B 56 0 SHEET 2 AA4 7 VAL B 32 VAL B 36 1 N ALA B 34 O SER B 53 SHEET 3 AA4 7 ILE B 8 VAL B 10 1 N VAL B 10 O ARG B 33 SHEET 4 AA4 7 GLY B 74 SER B 77 1 O PHE B 76 N LEU B 9 SHEET 5 AA4 7 HIS B 108 SER B 112 1 O VAL B 110 N SER B 77 SHEET 6 AA4 7 THR B 143 PRO B 148 1 O THR B 144 N TYR B 111 SHEET 7 AA4 7 ALA B 205 LEU B 208 1 O LEU B 206 N ARG B 147 SHEET 1 AA5 3 PHE B 150 PHE B 151 0 SHEET 2 AA5 3 ARG B 178 ILE B 182 1 O ILE B 182 N PHE B 150 SHEET 3 AA5 3 ASP B 211 THR B 214 -1 O LEU B 213 N VAL B 179 SHEET 1 AA6 3 GLN B 161 VAL B 163 0 SHEET 2 AA6 3 THR B 166 LEU B 171 -1 O THR B 166 N VAL B 163 SHEET 3 AA6 3 ALA B 230 GLU B 234 1 O GLU B 233 N VAL B 169 LINK MG MG B 310 O HOH B 612 1555 1555 2.25 LINK MG MG B 310 O HOH B 640 1555 4465 2.17 SITE 1 AC1 31 GLY A 12 THR A 14 GLY A 15 THR A 16 SITE 2 AC1 31 GLN A 17 ARG A 37 ASP A 58 LEU A 59 SITE 3 AC1 31 VAL A 78 GLN A 79 THR A 80 PHE A 81 SITE 4 AC1 31 GLU A 90 GLN A 93 LYS A 129 PRO A 148 SITE 5 AC1 31 THR A 149 PHE A 151 ASN A 154 5VD A 302 SITE 6 AC1 31 HOH A 406 HOH A 428 HOH A 455 HOH A 472 SITE 7 AC1 31 HOH A 485 HOH A 534 HOH A 545 HOH A 549 SITE 8 AC1 31 HOH A 557 HOH A 579 HOH A 716 SITE 1 AC2 18 PHE A 81 MET A 82 HIS A 125 PHE A 150 SITE 2 AC2 18 ASN A 154 PHE A 155 TRP A 158 LEU A 171 SITE 3 AC2 18 ILE A 246 ILE A 252 MET A 255 PHE A 259 SITE 4 AC2 18 TYR A 264 NAD A 301 GOL A 304 HOH A 461 SITE 5 AC2 18 HOH A 601 HOH A 639 SITE 1 AC3 8 THR A 177 ARG A 178 PHE A 259 GLN A 260 SITE 2 AC3 8 ASP A 262 HOH A 408 HOH A 415 HOH A 539 SITE 1 AC4 4 ASN A 154 TRP A 158 5VD A 302 HOH A 621 SITE 1 AC5 9 ALA A 63 ARG A 66 ARG A 231 HOH A 401 SITE 2 AC5 9 HOH A 486 HOH A 532 HOH A 566 HOH A 678 SITE 3 AC5 9 HOH A 719 SITE 1 AC6 7 ASP A 196 ASP A 197 HOH A 451 HOH A 604 SITE 2 AC6 7 HOH A 654 ARG B 119 ALA B 265 SITE 1 AC7 4 ARG A 28 VAL A 189 HOH A 671 HOH A 689 SITE 1 AC8 31 GLY B 12 THR B 14 GLY B 15 THR B 16 SITE 2 AC8 31 GLN B 17 ARG B 37 ASP B 58 LEU B 59 SITE 3 AC8 31 GLN B 79 THR B 80 PHE B 81 GLU B 90 SITE 4 AC8 31 GLN B 93 LYS B 129 PRO B 148 THR B 149 SITE 5 AC8 31 PHE B 151 ASN B 154 5VD B 302 HOH B 414 SITE 6 AC8 31 HOH B 439 HOH B 446 HOH B 488 HOH B 498 SITE 7 AC8 31 HOH B 503 HOH B 529 HOH B 552 HOH B 559 SITE 8 AC8 31 HOH B 597 HOH B 699 HOH B 702 SITE 1 AC9 18 PHE B 81 MET B 82 HIS B 125 PHE B 150 SITE 2 AC9 18 ASN B 154 PHE B 155 TRP B 158 LEU B 171 SITE 3 AC9 18 ILE B 246 ILE B 252 MET B 255 PHE B 259 SITE 4 AC9 18 TYR B 264 NAD B 301 GOL B 303 HOH B 459 SITE 5 AC9 18 HOH B 611 HOH B 651 SITE 1 AD1 7 ASN B 154 TRP B 158 5VD B 302 HOH B 472 SITE 2 AD1 7 HOH B 573 HOH B 654 HOH B 705 SITE 1 AD2 6 THR B 177 ARG B 178 PHE B 259 GLN B 260 SITE 2 AD2 6 ASP B 262 HOH B 424 SITE 1 AD3 8 PHE B 155 ALA B 156 ALA B 157 GLY B 159 SITE 2 AD3 8 PRO B 160 TRP B 290 PRO B 293 HOH B 401 SITE 1 AD4 8 GLN B 62 ARG B 66 ARG B 231 HOH B 517 SITE 2 AD4 8 HOH B 555 HOH B 568 HOH B 578 HOH B 688 SITE 1 AD5 10 ALA B 67 ALA B 70 GLY B 223 GLU B 224 SITE 2 AD5 10 GLY B 227 MET B 228 HOH B 418 HOH B 450 SITE 3 AD5 10 HOH B 458 HOH B 550 SITE 1 AD6 10 SER B 53 PRO B 276 GLY B 277 ARG B 279 SITE 2 AD6 10 EPE B 309 HOH B 402 HOH B 404 HOH B 474 SITE 3 AD6 10 HOH B 484 HOH B 640 SITE 1 AD7 15 PRO B 31 ALA B 48 GLY B 51 VAL B 52 SITE 2 AD7 15 PRO B 276 GLY B 277 LEU B 278 ARG B 279 SITE 3 AD7 15 ASP B 283 EPE B 308 MG B 310 HOH B 460 SITE 4 AD7 15 HOH B 640 HOH B 643 HOH B 649 SITE 1 AD8 5 VAL B 32 SER B 53 EPE B 309 HOH B 612 SITE 2 AD8 5 HOH B 640 CRYST1 56.476 66.025 176.319 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017707 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015146 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005672 0.00000