HEADER TRANSCRIPTION REGULATOR 05-DEC-15 5F64 TITLE PUTATIVE POSITIVE TRANSCRIPTION REGULATOR (SENSOR EVGS) FROM SHIGELLA TITLE 2 FLEXNERI COMPND MOL_ID: 1; COMPND 2 MOLECULE: POSITIVE TRANSCRIPTION REGULATOR EVGA; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHIGELLA FLEXNERI 2A STR. 2457T; SOURCE 3 ORGANISM_TAXID: 198215; SOURCE 4 STRAIN: 2457T; SOURCE 5 GENE: EVGA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS TRANSCRIPTION REGULATOR, SENSOR, EVGS, STRUCTURAL GENOMICS, IDP00102, KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, CSGID EXPDTA X-RAY DIFFRACTION AUTHOR B.NOCEK,J.OSIPIUK,R.MULLIGAN,M.GU,W.F.ANDERSON,A.JOACHIMIAK,CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 4 27-SEP-23 5F64 1 REMARK REVDAT 3 11-DEC-19 5F64 1 REMARK REVDAT 2 27-SEP-17 5F64 1 REMARK REVDAT 1 30-DEC-15 5F64 0 JRNL AUTH B.NOCEK,J.OSIPIUK,R.MULLIGAN,M.GU,W.F.ANDERSON,A.JOACHIMIAK, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL PUTATIVE POSITIVE TRANSCRIPTION REGULATOR (SENSOR EVGS) FROM JRNL TITL 2 SHIGELLA FLEXNERI. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 85.4 REMARK 3 NUMBER OF REFLECTIONS : 36035 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1928 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.71 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.78 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1638 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 52.75 REMARK 3 BIN R VALUE (WORKING SET) : 0.2690 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.3070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6364 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 107 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.77000 REMARK 3 B22 (A**2) : -0.32000 REMARK 3 B33 (A**2) : -0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.427 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.275 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.180 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.810 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.912 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6467 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6439 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8707 ; 1.548 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14816 ; 0.784 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 816 ; 5.746 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 286 ;41.891 ;25.315 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1242 ;18.761 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;23.501 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1010 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7291 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1403 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3267 ; 2.275 ; 3.395 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3266 ; 2.275 ; 3.395 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4079 ; 3.744 ; 5.084 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 203 REMARK 3 ORIGIN FOR THE GROUP (A): -0.2275 23.6581 31.5525 REMARK 3 T TENSOR REMARK 3 T11: 0.1149 T22: 0.0763 REMARK 3 T33: 0.0706 T12: 0.0186 REMARK 3 T13: -0.0567 T23: -0.0452 REMARK 3 L TENSOR REMARK 3 L11: 0.0211 L22: 0.8025 REMARK 3 L33: 2.2958 L12: -0.0484 REMARK 3 L13: 0.2006 L23: -0.0065 REMARK 3 S TENSOR REMARK 3 S11: -0.0021 S12: -0.0122 S13: -0.0026 REMARK 3 S21: -0.1212 S22: -0.1361 S23: 0.2220 REMARK 3 S31: -0.2525 S32: -0.1992 S33: 0.1382 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 203 REMARK 3 ORIGIN FOR THE GROUP (A): 17.5100 28.5193 53.7888 REMARK 3 T TENSOR REMARK 3 T11: 0.1254 T22: 0.0752 REMARK 3 T33: 0.0440 T12: -0.0656 REMARK 3 T13: -0.0014 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 0.5517 L22: 0.8387 REMARK 3 L33: 1.1022 L12: -0.3607 REMARK 3 L13: 0.0133 L23: -0.2333 REMARK 3 S TENSOR REMARK 3 S11: -0.0718 S12: -0.0257 S13: -0.1040 REMARK 3 S21: 0.0039 S22: -0.0806 S23: 0.0292 REMARK 3 S31: -0.0274 S32: 0.0151 S33: 0.1524 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 0 C 203 REMARK 3 ORIGIN FOR THE GROUP (A): 42.2510 13.7516 58.9522 REMARK 3 T TENSOR REMARK 3 T11: 0.1358 T22: 0.0715 REMARK 3 T33: 0.0960 T12: -0.0122 REMARK 3 T13: 0.0622 T23: 0.0280 REMARK 3 L TENSOR REMARK 3 L11: 3.0993 L22: 0.0748 REMARK 3 L33: 1.3275 L12: -0.2398 REMARK 3 L13: -1.2001 L23: 0.3061 REMARK 3 S TENSOR REMARK 3 S11: -0.0430 S12: -0.4582 S13: -0.1875 REMARK 3 S21: -0.0297 S22: 0.0343 S23: 0.0171 REMARK 3 S31: -0.1271 S32: 0.2176 S33: 0.0087 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 0 D 203 REMARK 3 ORIGIN FOR THE GROUP (A): 1.1973 0.1112 14.4475 REMARK 3 T TENSOR REMARK 3 T11: 0.1506 T22: 0.1222 REMARK 3 T33: 0.0353 T12: -0.0010 REMARK 3 T13: -0.0683 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 0.8116 L22: 0.0683 REMARK 3 L33: 1.1219 L12: 0.0563 REMARK 3 L13: 0.6144 L23: 0.2386 REMARK 3 S TENSOR REMARK 3 S11: -0.0626 S12: 0.0320 S13: 0.0641 REMARK 3 S21: 0.0180 S22: -0.0278 S23: 0.0073 REMARK 3 S31: -0.0537 S32: -0.0252 S33: 0.0904 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5F64 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000216084. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43850 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.83000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: 3F6C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M TRI-SODIUM CITRATE, 0.1 M TRIS REMARK 280 BUFFER, 15% PEG-400, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 84.24250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.43350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 84.24250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 55.43350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 GLY A 204 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 GLY B 204 REMARK 465 SER C -2 REMARK 465 ASN C -1 REMARK 465 GLY C 204 REMARK 465 SER D -2 REMARK 465 ASN D -1 REMARK 465 GLY D 204 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 153 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 189 -77.25 -91.68 REMARK 500 ASP B 7 132.90 -170.13 REMARK 500 ARG B 70 32.21 -96.18 REMARK 500 ASP C 7 142.32 -171.81 REMARK 500 LYS C 45 59.43 38.95 REMARK 500 ASP C 84 51.39 37.61 REMARK 500 ASP C 157 25.47 -79.83 REMARK 500 LEU C 182 -73.21 -66.76 REMARK 500 MET C 183 -59.24 -24.72 REMARK 500 GLU C 187 32.13 77.38 REMARK 500 LYS C 202 74.46 63.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP00102 RELATED DB: TARGETTRACK DBREF 5F64 A 1 204 UNP P0ACZ7 EVGA_SHIFL 1 204 DBREF 5F64 B 1 204 UNP P0ACZ7 EVGA_SHIFL 1 204 DBREF 5F64 C 1 204 UNP P0ACZ7 EVGA_SHIFL 1 204 DBREF 5F64 D 1 204 UNP P0ACZ7 EVGA_SHIFL 1 204 SEQADV 5F64 SER A -2 UNP P0ACZ7 EXPRESSION TAG SEQADV 5F64 ASN A -1 UNP P0ACZ7 EXPRESSION TAG SEQADV 5F64 ALA A 0 UNP P0ACZ7 EXPRESSION TAG SEQADV 5F64 SER B -2 UNP P0ACZ7 EXPRESSION TAG SEQADV 5F64 ASN B -1 UNP P0ACZ7 EXPRESSION TAG SEQADV 5F64 ALA B 0 UNP P0ACZ7 EXPRESSION TAG SEQADV 5F64 SER C -2 UNP P0ACZ7 EXPRESSION TAG SEQADV 5F64 ASN C -1 UNP P0ACZ7 EXPRESSION TAG SEQADV 5F64 ALA C 0 UNP P0ACZ7 EXPRESSION TAG SEQADV 5F64 SER D -2 UNP P0ACZ7 EXPRESSION TAG SEQADV 5F64 ASN D -1 UNP P0ACZ7 EXPRESSION TAG SEQADV 5F64 ALA D 0 UNP P0ACZ7 EXPRESSION TAG SEQRES 1 A 207 SER ASN ALA MET ASN ALA ILE ILE ILE ASP ASP HIS PRO SEQRES 2 A 207 LEU ALA ILE ALA ALA ILE ARG ASN LEU LEU ILE LYS ASN SEQRES 3 A 207 ASP ILE GLU ILE LEU ALA GLU LEU THR GLU GLY GLY SER SEQRES 4 A 207 ALA VAL GLN ARG VAL GLU THR LEU LYS PRO ASP ILE VAL SEQRES 5 A 207 ILE ILE ASP VAL ASP ILE PRO GLY VAL ASN GLY ILE GLN SEQRES 6 A 207 VAL LEU GLU THR LEU ARG LYS ARG GLN TYR SER GLY ILE SEQRES 7 A 207 ILE ILE ILE VAL SER ALA LYS ASN ASP HIS PHE TYR GLY SEQRES 8 A 207 LYS HIS CYS ALA ASP ALA GLY ALA ASN GLY PHE VAL SER SEQRES 9 A 207 LYS LYS GLU GLY MET ASN ASN ILE ILE ALA ALA ILE GLU SEQRES 10 A 207 ALA ALA LYS ASN GLY TYR CYS TYR PHE PRO PHE SER LEU SEQRES 11 A 207 ASN ARG PHE VAL GLY SER LEU THR SER ASP GLN GLN LYS SEQRES 12 A 207 LEU ASP SER LEU SER LYS GLN GLU ILE SER VAL MET ARG SEQRES 13 A 207 TYR ILE LEU ASP GLY LYS ASP ASN ASN ASP ILE ALA GLU SEQRES 14 A 207 LYS MET PHE ILE SER ASN LYS THR VAL SER THR TYR LYS SEQRES 15 A 207 SER ARG LEU MET GLU LYS LEU GLU CYS LYS SER LEU MET SEQRES 16 A 207 ASP LEU TYR THR PHE ALA GLN ARG ASN LYS ILE GLY SEQRES 1 B 207 SER ASN ALA MET ASN ALA ILE ILE ILE ASP ASP HIS PRO SEQRES 2 B 207 LEU ALA ILE ALA ALA ILE ARG ASN LEU LEU ILE LYS ASN SEQRES 3 B 207 ASP ILE GLU ILE LEU ALA GLU LEU THR GLU GLY GLY SER SEQRES 4 B 207 ALA VAL GLN ARG VAL GLU THR LEU LYS PRO ASP ILE VAL SEQRES 5 B 207 ILE ILE ASP VAL ASP ILE PRO GLY VAL ASN GLY ILE GLN SEQRES 6 B 207 VAL LEU GLU THR LEU ARG LYS ARG GLN TYR SER GLY ILE SEQRES 7 B 207 ILE ILE ILE VAL SER ALA LYS ASN ASP HIS PHE TYR GLY SEQRES 8 B 207 LYS HIS CYS ALA ASP ALA GLY ALA ASN GLY PHE VAL SER SEQRES 9 B 207 LYS LYS GLU GLY MET ASN ASN ILE ILE ALA ALA ILE GLU SEQRES 10 B 207 ALA ALA LYS ASN GLY TYR CYS TYR PHE PRO PHE SER LEU SEQRES 11 B 207 ASN ARG PHE VAL GLY SER LEU THR SER ASP GLN GLN LYS SEQRES 12 B 207 LEU ASP SER LEU SER LYS GLN GLU ILE SER VAL MET ARG SEQRES 13 B 207 TYR ILE LEU ASP GLY LYS ASP ASN ASN ASP ILE ALA GLU SEQRES 14 B 207 LYS MET PHE ILE SER ASN LYS THR VAL SER THR TYR LYS SEQRES 15 B 207 SER ARG LEU MET GLU LYS LEU GLU CYS LYS SER LEU MET SEQRES 16 B 207 ASP LEU TYR THR PHE ALA GLN ARG ASN LYS ILE GLY SEQRES 1 C 207 SER ASN ALA MET ASN ALA ILE ILE ILE ASP ASP HIS PRO SEQRES 2 C 207 LEU ALA ILE ALA ALA ILE ARG ASN LEU LEU ILE LYS ASN SEQRES 3 C 207 ASP ILE GLU ILE LEU ALA GLU LEU THR GLU GLY GLY SER SEQRES 4 C 207 ALA VAL GLN ARG VAL GLU THR LEU LYS PRO ASP ILE VAL SEQRES 5 C 207 ILE ILE ASP VAL ASP ILE PRO GLY VAL ASN GLY ILE GLN SEQRES 6 C 207 VAL LEU GLU THR LEU ARG LYS ARG GLN TYR SER GLY ILE SEQRES 7 C 207 ILE ILE ILE VAL SER ALA LYS ASN ASP HIS PHE TYR GLY SEQRES 8 C 207 LYS HIS CYS ALA ASP ALA GLY ALA ASN GLY PHE VAL SER SEQRES 9 C 207 LYS LYS GLU GLY MET ASN ASN ILE ILE ALA ALA ILE GLU SEQRES 10 C 207 ALA ALA LYS ASN GLY TYR CYS TYR PHE PRO PHE SER LEU SEQRES 11 C 207 ASN ARG PHE VAL GLY SER LEU THR SER ASP GLN GLN LYS SEQRES 12 C 207 LEU ASP SER LEU SER LYS GLN GLU ILE SER VAL MET ARG SEQRES 13 C 207 TYR ILE LEU ASP GLY LYS ASP ASN ASN ASP ILE ALA GLU SEQRES 14 C 207 LYS MET PHE ILE SER ASN LYS THR VAL SER THR TYR LYS SEQRES 15 C 207 SER ARG LEU MET GLU LYS LEU GLU CYS LYS SER LEU MET SEQRES 16 C 207 ASP LEU TYR THR PHE ALA GLN ARG ASN LYS ILE GLY SEQRES 1 D 207 SER ASN ALA MET ASN ALA ILE ILE ILE ASP ASP HIS PRO SEQRES 2 D 207 LEU ALA ILE ALA ALA ILE ARG ASN LEU LEU ILE LYS ASN SEQRES 3 D 207 ASP ILE GLU ILE LEU ALA GLU LEU THR GLU GLY GLY SER SEQRES 4 D 207 ALA VAL GLN ARG VAL GLU THR LEU LYS PRO ASP ILE VAL SEQRES 5 D 207 ILE ILE ASP VAL ASP ILE PRO GLY VAL ASN GLY ILE GLN SEQRES 6 D 207 VAL LEU GLU THR LEU ARG LYS ARG GLN TYR SER GLY ILE SEQRES 7 D 207 ILE ILE ILE VAL SER ALA LYS ASN ASP HIS PHE TYR GLY SEQRES 8 D 207 LYS HIS CYS ALA ASP ALA GLY ALA ASN GLY PHE VAL SER SEQRES 9 D 207 LYS LYS GLU GLY MET ASN ASN ILE ILE ALA ALA ILE GLU SEQRES 10 D 207 ALA ALA LYS ASN GLY TYR CYS TYR PHE PRO PHE SER LEU SEQRES 11 D 207 ASN ARG PHE VAL GLY SER LEU THR SER ASP GLN GLN LYS SEQRES 12 D 207 LEU ASP SER LEU SER LYS GLN GLU ILE SER VAL MET ARG SEQRES 13 D 207 TYR ILE LEU ASP GLY LYS ASP ASN ASN ASP ILE ALA GLU SEQRES 14 D 207 LYS MET PHE ILE SER ASN LYS THR VAL SER THR TYR LYS SEQRES 15 D 207 SER ARG LEU MET GLU LYS LEU GLU CYS LYS SER LEU MET SEQRES 16 D 207 ASP LEU TYR THR PHE ALA GLN ARG ASN LYS ILE GLY FORMUL 5 HOH *107(H2 O) HELIX 1 AA1 HIS A 9 ASN A 23 1 15 HELIX 2 AA2 SER A 36 LYS A 45 1 10 HELIX 3 AA3 ASN A 59 ARG A 70 1 12 HELIX 4 AA4 PHE A 86 ALA A 94 1 9 HELIX 5 AA5 LYS A 103 GLY A 105 5 3 HELIX 6 AA6 MET A 106 ASN A 118 1 13 HELIX 7 AA7 SER A 126 PHE A 130 5 5 HELIX 8 AA8 LEU A 134 SER A 143 1 10 HELIX 9 AA9 SER A 145 LEU A 156 1 12 HELIX 10 AB1 ASP A 160 MET A 168 1 9 HELIX 11 AB2 SER A 171 LEU A 186 1 16 HELIX 12 AB3 SER A 190 ASN A 201 1 12 HELIX 13 AB4 HIS B 9 ASN B 23 1 15 HELIX 14 AB5 SER B 36 LYS B 45 1 10 HELIX 15 AB6 ASN B 59 ARG B 70 1 12 HELIX 16 AB7 PHE B 86 GLY B 95 1 10 HELIX 17 AB8 LYS B 103 GLY B 105 5 3 HELIX 18 AB9 MET B 106 GLY B 119 1 14 HELIX 19 AC1 SER B 126 PHE B 130 5 5 HELIX 20 AC2 LEU B 134 SER B 143 1 10 HELIX 21 AC3 SER B 145 ASP B 157 1 13 HELIX 22 AC4 ASP B 160 PHE B 169 1 10 HELIX 23 AC5 SER B 171 GLU B 187 1 17 HELIX 24 AC6 SER B 190 LYS B 202 1 13 HELIX 25 AC7 HIS C 9 ASN C 23 1 15 HELIX 26 AC8 SER C 36 LYS C 45 1 10 HELIX 27 AC9 ASN C 59 ARG C 70 1 12 HELIX 28 AD1 PHE C 86 ALA C 94 1 9 HELIX 29 AD2 LYS C 103 GLY C 105 5 3 HELIX 30 AD3 MET C 106 ASN C 118 1 13 HELIX 31 AD4 SER C 126 PHE C 130 5 5 HELIX 32 AD5 LEU C 134 LEU C 144 1 11 HELIX 33 AD6 SER C 145 ASP C 157 1 13 HELIX 34 AD7 ASP C 160 PHE C 169 1 10 HELIX 35 AD8 SER C 171 GLU C 187 1 17 HELIX 36 AD9 SER C 190 ASN C 201 1 12 HELIX 37 AE1 HIS D 9 ASN D 23 1 15 HELIX 38 AE2 SER D 36 LYS D 45 1 10 HELIX 39 AE3 ASN D 59 ARG D 70 1 12 HELIX 40 AE4 PHE D 86 GLY D 95 1 10 HELIX 41 AE5 MET D 106 ASN D 118 1 13 HELIX 42 AE6 SER D 126 PHE D 130 5 5 HELIX 43 AE7 LEU D 134 SER D 143 1 10 HELIX 44 AE8 SER D 145 ASP D 157 1 13 HELIX 45 AE9 ASP D 160 PHE D 169 1 10 HELIX 46 AF1 SER D 171 GLU D 187 1 17 HELIX 47 AF2 SER D 190 LYS D 202 1 13 SHEET 1 AA1 5 ILE A 25 LEU A 31 0 SHEET 2 AA1 5 MET A 1 ILE A 6 1 N ILE A 5 O LEU A 31 SHEET 3 AA1 5 ILE A 48 ASP A 52 1 O ILE A 50 N ILE A 6 SHEET 4 AA1 5 ILE A 75 SER A 80 1 O VAL A 79 N ILE A 51 SHEET 5 AA1 5 GLY A 98 SER A 101 1 O GLY A 98 N ILE A 78 SHEET 1 AA2 2 TYR A 120 PRO A 124 0 SHEET 2 AA2 2 TYR D 120 PRO D 124 -1 O CYS D 121 N PHE A 123 SHEET 1 AA3 5 ILE B 25 LEU B 31 0 SHEET 2 AA3 5 MET B 1 ILE B 6 1 N ILE B 5 O LEU B 31 SHEET 3 AA3 5 ILE B 48 ASP B 52 1 O ILE B 50 N ILE B 6 SHEET 4 AA3 5 ILE B 75 SER B 80 1 O VAL B 79 N ILE B 51 SHEET 5 AA3 5 GLY B 98 SER B 101 1 O GLY B 98 N ILE B 78 SHEET 1 AA4 2 TYR B 120 PRO B 124 0 SHEET 2 AA4 2 TYR C 120 PRO C 124 -1 O PHE C 123 N CYS B 121 SHEET 1 AA5 5 GLU C 26 LEU C 31 0 SHEET 2 AA5 5 ASN C 2 ILE C 6 1 N ILE C 5 O LEU C 31 SHEET 3 AA5 5 ILE C 48 ASP C 52 1 O ILE C 50 N ILE C 6 SHEET 4 AA5 5 ILE C 75 SER C 80 1 O ILE C 77 N VAL C 49 SHEET 5 AA5 5 GLY C 98 SER C 101 1 O GLY C 98 N ILE C 78 SHEET 1 AA6 5 ILE D 25 LEU D 31 0 SHEET 2 AA6 5 MET D 1 ILE D 6 1 N ILE D 5 O LEU D 31 SHEET 3 AA6 5 ILE D 48 ASP D 52 1 O ILE D 50 N ILE D 6 SHEET 4 AA6 5 ILE D 75 SER D 80 1 O ILE D 77 N VAL D 49 SHEET 5 AA6 5 GLY D 98 SER D 101 1 O GLY D 98 N ILE D 78 CRYST1 168.485 110.867 110.769 90.00 126.74 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005935 0.000000 0.004430 0.00000 SCALE2 0.000000 0.009020 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011265 0.00000