HEADER HYDROLASE/HYDROLASE INHIBITOR 11-DEC-15 5FA7 TITLE CTX-M-15 IN COMPLEX WITH FPI-1523 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 26-291; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: BLAUOE-1, BLA, BLA CTX-M-15, BLA_1, BLA_2, BLA_3, BLACTX-M-15, SOURCE 5 BLACTX-M15, CTX-M-15, ECONIH1_02760, ECONIH1_27135, ERS085368_04262, SOURCE 6 ERS085370_01802, ERS085377_05268, ERS139214_01914, ERS139238_04648, SOURCE 7 ERS139238_04652, ERS150880_04508, HUS2011_PI0012, PCTXM15_EC8_00003, SOURCE 8 SK84_05077, SK86_03319; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.M.KING,D.T.KING,S.FRENCH,E.BROUILLETTE,A.ASLI,A.N.ALEXANDER, AUTHOR 2 M.VUCKOVIC,S.N.MAITI,T.R.PARR,E.D.BROWN,F.MALOUIN,N.C.J.STRYNADKA, AUTHOR 3 G.D.WRIGHT REVDAT 3 20-NOV-19 5FA7 1 REMARK REVDAT 2 27-APR-16 5FA7 1 JRNL REVDAT 1 20-JAN-16 5FA7 0 JRNL AUTH A.M.KING,D.T.KING,S.FRENCH,E.BROUILLETTE,A.ASLI, JRNL AUTH 2 J.A.ALEXANDER,M.VUCKOVIC,S.N.MAITI,T.R.PARR,E.D.BROWN, JRNL AUTH 3 F.MALOUIN,N.C.STRYNADKA,G.D.WRIGHT JRNL TITL STRUCTURAL AND KINETIC CHARACTERIZATION OF JRNL TITL 2 DIAZABICYCLOOCTANES AS DUAL INHIBITORS OF BOTH JRNL TITL 3 SERINE-BETA-LACTAMASES AND PENICILLIN-BINDING PROTEINS. JRNL REF ACS CHEM.BIOL. V. 11 864 2016 JRNL REFN ESSN 1554-8937 JRNL PMID 26731698 JRNL DOI 10.1021/ACSCHEMBIO.5B00944 REMARK 2 REMARK 2 RESOLUTION. 1.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 59810 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 3068 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.67 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.71 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.39 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 4402 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2102 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4184 REMARK 3 BIN R VALUE (WORKING SET) : 0.2081 REMARK 3 BIN FREE R VALUE : 0.2506 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.95 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 218 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3890 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.67 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.79670 REMARK 3 B22 (A**2) : -0.67460 REMARK 3 B33 (A**2) : 2.47130 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.49020 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.178 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.096 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.095 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.121 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.095 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 7976 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 14448 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1785 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 104 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1181 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 7976 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 553 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 9204 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.12 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.97 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 14.75 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 16.6607 -3.4357 18.2839 REMARK 3 T TENSOR REMARK 3 T11: -0.0703 T22: -0.0012 REMARK 3 T33: 0.0042 T12: 0.0017 REMARK 3 T13: -0.0365 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.2923 L22: 0.2412 REMARK 3 L33: 0.6122 L12: -0.0719 REMARK 3 L13: 0.0318 L23: 0.0178 REMARK 3 S TENSOR REMARK 3 S11: -0.0249 S12: -0.0076 S13: -0.0060 REMARK 3 S21: 0.0043 S22: 0.0003 S23: -0.0209 REMARK 3 S31: 0.0140 S32: 0.0215 S33: 0.0246 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 15.3338 -8.9331 -18.4739 REMARK 3 T TENSOR REMARK 3 T11: -0.0731 T22: -0.0125 REMARK 3 T33: 0.0071 T12: 0.0083 REMARK 3 T13: -0.0406 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.3954 L22: 0.2389 REMARK 3 L33: 0.6243 L12: 0.0794 REMARK 3 L13: -0.0346 L23: -0.0072 REMARK 3 S TENSOR REMARK 3 S11: 0.0002 S12: 0.0362 S13: -0.0014 REMARK 3 S21: -0.0097 S22: 0.0263 S23: -0.0056 REMARK 3 S31: -0.0349 S32: -0.0133 S33: -0.0265 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FA7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000216267. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59836 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.670 REMARK 200 RESOLUTION RANGE LOW (A) : 70.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 0.1M MES PH6.5, REMARK 280 30% PEG5K MONOMETHYL ETHER, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.13500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 23 REMARK 465 TYR A 24 REMARK 465 ALA A 25 REMARK 465 GLN A 26 REMARK 465 GLY A 287 REMARK 465 LEU A 288 REMARK 465 LEU B 23 REMARK 465 TYR B 24 REMARK 465 ALA B 25 REMARK 465 GLN B 26 REMARK 465 THR B 27 REMARK 465 ALA B 28 REMARK 465 GLY B 287 REMARK 465 LEU B 288 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR B 262 O HOH B 401 1.50 REMARK 500 H ASP B 253 O HOH B 402 1.51 REMARK 500 HG SER B 118 O HOH B 405 1.56 REMARK 500 OG SER B 70 OAN 5VR B 301 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O ALA A 53 HE ARG B 191 2555 1.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 191 O - C - N ANGL. DEV. = 9.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 69 -142.46 55.27 REMARK 500 VAL A 103 -144.39 -121.68 REMARK 500 SER A 220 -125.14 -107.69 REMARK 500 CYS B 69 -140.55 51.85 REMARK 500 VAL B 103 -142.30 -122.98 REMARK 500 SER B 220 -126.74 -106.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5VR A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide 5VR B 301 and SER B REMARK 800 70 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FAO RELATED DB: PDB REMARK 900 RELATED ID: 5FAP RELATED DB: PDB REMARK 900 RELATED ID: 5FAQ RELATED DB: PDB REMARK 900 RELATED ID: 5FAS RELATED DB: PDB REMARK 900 RELATED ID: 5FAT RELATED DB: PDB DBREF 5FA7 A 23 288 UNP Q9EXV5 Q9EXV5_ECOLX 26 291 DBREF 5FA7 B 23 288 UNP Q9EXV5 Q9EXV5_ECOLX 26 291 SEQRES 1 A 266 LEU TYR ALA GLN THR ALA ASP VAL GLN GLN LYS LEU ALA SEQRES 2 A 266 GLU LEU GLU ARG GLN SER GLY GLY ARG LEU GLY VAL ALA SEQRES 3 A 266 LEU ILE ASN THR ALA ASP ASN SER GLN ILE LEU TYR ARG SEQRES 4 A 266 ALA ASP GLU ARG PHE ALA MET CYS SER THR SER LYS VAL SEQRES 5 A 266 MET ALA ALA ALA ALA VAL LEU LYS LYS SER GLU SER GLU SEQRES 6 A 266 PRO ASN LEU LEU ASN GLN ARG VAL GLU ILE LYS LYS SER SEQRES 7 A 266 ASP LEU VAL ASN TYR ASN PRO ILE ALA GLU LYS HIS VAL SEQRES 8 A 266 ASN GLY THR MET SER LEU ALA GLU LEU SER ALA ALA ALA SEQRES 9 A 266 LEU GLN TYR SER ASP ASN VAL ALA MET ASN LYS LEU ILE SEQRES 10 A 266 ALA HIS VAL GLY GLY PRO ALA SER VAL THR ALA PHE ALA SEQRES 11 A 266 ARG GLN LEU GLY ASP GLU THR PHE ARG LEU ASP ARG THR SEQRES 12 A 266 GLU PRO THR LEU ASN THR ALA ILE PRO GLY ASP PRO ARG SEQRES 13 A 266 ASP THR THR SER PRO ARG ALA MET ALA GLN THR LEU ARG SEQRES 14 A 266 ASN LEU THR LEU GLY LYS ALA LEU GLY ASP SER GLN ARG SEQRES 15 A 266 ALA GLN LEU VAL THR TRP MET LYS GLY ASN THR THR GLY SEQRES 16 A 266 ALA ALA SER ILE GLN ALA GLY LEU PRO ALA SER TRP VAL SEQRES 17 A 266 VAL GLY ASP LYS THR GLY SER GLY GLY TYR GLY THR THR SEQRES 18 A 266 ASN ASP ILE ALA VAL ILE TRP PRO LYS ASP ARG ALA PRO SEQRES 19 A 266 LEU ILE LEU VAL THR TYR PHE THR GLN PRO GLN PRO LYS SEQRES 20 A 266 ALA GLU SER ARG ARG ASP VAL LEU ALA SER ALA ALA LYS SEQRES 21 A 266 ILE VAL THR ASP GLY LEU SEQRES 1 B 266 LEU TYR ALA GLN THR ALA ASP VAL GLN GLN LYS LEU ALA SEQRES 2 B 266 GLU LEU GLU ARG GLN SER GLY GLY ARG LEU GLY VAL ALA SEQRES 3 B 266 LEU ILE ASN THR ALA ASP ASN SER GLN ILE LEU TYR ARG SEQRES 4 B 266 ALA ASP GLU ARG PHE ALA MET CYS SER THR SER LYS VAL SEQRES 5 B 266 MET ALA ALA ALA ALA VAL LEU LYS LYS SER GLU SER GLU SEQRES 6 B 266 PRO ASN LEU LEU ASN GLN ARG VAL GLU ILE LYS LYS SER SEQRES 7 B 266 ASP LEU VAL ASN TYR ASN PRO ILE ALA GLU LYS HIS VAL SEQRES 8 B 266 ASN GLY THR MET SER LEU ALA GLU LEU SER ALA ALA ALA SEQRES 9 B 266 LEU GLN TYR SER ASP ASN VAL ALA MET ASN LYS LEU ILE SEQRES 10 B 266 ALA HIS VAL GLY GLY PRO ALA SER VAL THR ALA PHE ALA SEQRES 11 B 266 ARG GLN LEU GLY ASP GLU THR PHE ARG LEU ASP ARG THR SEQRES 12 B 266 GLU PRO THR LEU ASN THR ALA ILE PRO GLY ASP PRO ARG SEQRES 13 B 266 ASP THR THR SER PRO ARG ALA MET ALA GLN THR LEU ARG SEQRES 14 B 266 ASN LEU THR LEU GLY LYS ALA LEU GLY ASP SER GLN ARG SEQRES 15 B 266 ALA GLN LEU VAL THR TRP MET LYS GLY ASN THR THR GLY SEQRES 16 B 266 ALA ALA SER ILE GLN ALA GLY LEU PRO ALA SER TRP VAL SEQRES 17 B 266 VAL GLY ASP LYS THR GLY SER GLY GLY TYR GLY THR THR SEQRES 18 B 266 ASN ASP ILE ALA VAL ILE TRP PRO LYS ASP ARG ALA PRO SEQRES 19 B 266 LEU ILE LEU VAL THR TYR PHE THR GLN PRO GLN PRO LYS SEQRES 20 B 266 ALA GLU SER ARG ARG ASP VAL LEU ALA SER ALA ALA LYS SEQRES 21 B 266 ILE VAL THR ASP GLY LEU HET 5VR A 301 35 HET 5VR B 301 35 HETNAM 5VR [[(3~{R},6~{S})-6-(ACETAMIDOCARBAMOYL)-1-METHANOYL- HETNAM 2 5VR PIPERIDIN-3-YL]AMINO] HYDROGEN SULFATE FORMUL 3 5VR 2(C9 H16 N4 O7 S) FORMUL 5 HOH *520(H2 O) HELIX 1 AA1 THR A 27 GLY A 42 1 16 HELIX 2 AA2 CYS A 69 THR A 71 5 3 HELIX 3 AA3 SER A 72 GLU A 85 1 14 HELIX 4 AA4 ASN A 89 ASN A 92 5 4 HELIX 5 AA5 LYS A 98 LEU A 102 5 5 HELIX 6 AA6 ILE A 108 HIS A 112 5 5 HELIX 7 AA7 LEU A 119 SER A 130 1 12 HELIX 8 AA8 ASP A 131 GLY A 143 1 13 HELIX 9 AA9 GLY A 144 LEU A 155 1 12 HELIX 10 AB1 PRO A 167 THR A 171 5 5 HELIX 11 AB2 SER A 182 LEU A 195 1 14 HELIX 12 AB3 GLY A 200 GLY A 213 1 14 HELIX 13 AB4 SER A 220 LEU A 225 5 6 HELIX 14 AB5 ARG A 273 ASP A 286 1 14 HELIX 15 AB6 VAL B 30 GLY B 42 1 13 HELIX 16 AB7 CYS B 69 THR B 71 5 3 HELIX 17 AB8 SER B 72 SER B 84 1 13 HELIX 18 AB9 ASN B 89 ASN B 92 5 4 HELIX 19 AC1 LYS B 98 LEU B 102 5 5 HELIX 20 AC2 ILE B 108 HIS B 112 5 5 HELIX 21 AC3 LEU B 119 SER B 130 1 12 HELIX 22 AC4 ASP B 131 VAL B 142 1 12 HELIX 23 AC5 GLY B 144 LEU B 155 1 12 HELIX 24 AC6 PRO B 167 THR B 171 5 5 HELIX 25 AC7 SER B 182 LEU B 195 1 14 HELIX 26 AC8 GLY B 200 GLY B 213 1 14 HELIX 27 AC9 SER B 220 LEU B 225 5 6 HELIX 28 AD1 ARG B 273 ASP B 286 1 14 SHEET 1 AA1 5 GLN A 57 TYR A 60 0 SHEET 2 AA1 5 ARG A 44 ASN A 51 -1 N VAL A 47 O TYR A 60 SHEET 3 AA1 5 LEU A 257 THR A 264 -1 O TYR A 262 N GLY A 46 SHEET 4 AA1 5 THR A 242 TRP A 250 -1 N ILE A 249 O LEU A 257 SHEET 5 AA1 5 VAL A 230 GLY A 238 -1 N VAL A 230 O TRP A 250 SHEET 1 AA2 2 PHE A 66 ALA A 67 0 SHEET 2 AA2 2 THR A 180 THR A 181 -1 O THR A 181 N PHE A 66 SHEET 1 AA3 2 ARG A 94 ILE A 97 0 SHEET 2 AA3 2 GLY A 115 SER A 118 -1 O GLY A 115 N ILE A 97 SHEET 1 AA4 5 GLN B 57 TYR B 60 0 SHEET 2 AA4 5 ARG B 44 ASN B 51 -1 N VAL B 47 O TYR B 60 SHEET 3 AA4 5 LEU B 257 THR B 264 -1 O THR B 264 N ARG B 44 SHEET 4 AA4 5 THR B 242 TRP B 250 -1 N ASP B 245 O THR B 261 SHEET 5 AA4 5 VAL B 230 GLY B 238 -1 N VAL B 230 O TRP B 250 SHEET 1 AA5 2 PHE B 66 ALA B 67 0 SHEET 2 AA5 2 THR B 180 THR B 181 -1 O THR B 181 N PHE B 66 SHEET 1 AA6 2 ARG B 94 ILE B 97 0 SHEET 2 AA6 2 GLY B 115 SER B 118 -1 O MET B 117 N VAL B 95 LINK OG SER A 70 CAM 5VR A 301 1555 1555 1.29 LINK OG SER B 70 CAM 5VR B 301 1555 1555 1.28 CISPEP 1 GLU A 166 PRO A 167 0 -1.42 CISPEP 2 GLU B 166 PRO B 167 0 2.60 SITE 1 AC1 17 CYS A 69 SER A 70 ASN A 104 SER A 130 SITE 2 AC1 17 ASN A 132 PRO A 167 ASN A 170 LYS A 234 SITE 3 AC1 17 THR A 235 GLY A 236 SER A 237 HOH A 401 SITE 4 AC1 17 HOH A 539 HOH A 549 HOH A 568 HOH A 571 SITE 5 AC1 17 HOH A 579 SITE 1 AC2 21 MET B 68 CYS B 69 THR B 71 SER B 72 SITE 2 AC2 21 LYS B 73 ASN B 104 SER B 130 ASN B 132 SITE 3 AC2 21 GLU B 166 PRO B 167 ASN B 170 THR B 216 SITE 4 AC2 21 LYS B 234 THR B 235 GLY B 236 SER B 237 SITE 5 AC2 21 HOH B 441 HOH B 507 HOH B 523 HOH B 561 SITE 6 AC2 21 HOH B 572 CRYST1 62.730 60.270 76.010 90.00 112.78 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015941 0.000000 0.006695 0.00000 SCALE2 0.000000 0.016592 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014269 0.00000