HEADER HYDROLASE 14-DEC-15 5FBY TITLE CRYSTAL STRUCTURE OF CTSPD COMPND MOL_ID: 1; COMPND 2 MOLECULE: SEPARASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1621-2223; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CLEAVED PEPTIDE; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHAETOMIUM THERMOPHILUM (STRAIN DSM 1495 / CBS SOURCE 3 144.50 / IMI 039719); SOURCE 4 ORGANISM_TAXID: 759272; SOURCE 5 STRAIN: DSM 1495 / CBS 144.50 / IMI 039719; SOURCE 6 GENE: CTHT_0070540; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COHESIN, COMPLEX, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.LIN,X.LUO,H.YU REVDAT 6 06-MAR-24 5FBY 1 REMARK REVDAT 5 27-SEP-17 5FBY 1 REMARK REVDAT 4 04-MAY-16 5FBY 1 COMPND REVDAT 3 27-APR-16 5FBY 1 JRNL REVDAT 2 13-APR-16 5FBY 1 JRNL REVDAT 1 30-MAR-16 5FBY 0 JRNL AUTH Z.LIN,X.LUO,H.YU JRNL TITL STRUCTURAL BASIS OF COHESIN CLEAVAGE BY SEPARASE. JRNL REF NATURE V. 532 131 2016 JRNL REFN ESSN 1476-4687 JRNL PMID 27027290 JRNL DOI 10.1038/NATURE17402 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1839 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 46923 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.280 REMARK 3 FREE R VALUE TEST SET COUNT : 2006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.3973 - 4.5739 1.00 3470 150 0.1833 0.2034 REMARK 3 2 4.5739 - 3.6308 1.00 3325 151 0.1460 0.1784 REMARK 3 3 3.6308 - 3.1719 1.00 3286 146 0.1565 0.1788 REMARK 3 4 3.1719 - 2.8819 1.00 3289 144 0.1729 0.1884 REMARK 3 5 2.8819 - 2.6754 1.00 3254 145 0.1652 0.1835 REMARK 3 6 2.6754 - 2.5177 1.00 3232 146 0.1717 0.1849 REMARK 3 7 2.5177 - 2.3916 1.00 3245 148 0.1625 0.1866 REMARK 3 8 2.3916 - 2.2875 1.00 3244 141 0.1690 0.2096 REMARK 3 9 2.2875 - 2.1994 1.00 3228 140 0.1797 0.2129 REMARK 3 10 2.1994 - 2.1235 1.00 3230 137 0.1763 0.2231 REMARK 3 11 2.1235 - 2.0571 1.00 3189 146 0.1799 0.2018 REMARK 3 12 2.0571 - 1.9983 0.99 3167 154 0.1878 0.2370 REMARK 3 13 1.9983 - 1.9457 0.94 3022 125 0.2005 0.2599 REMARK 3 14 1.9457 - 1.8982 0.85 2736 133 0.2359 0.2586 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 4040 REMARK 3 ANGLE : 1.262 5471 REMARK 3 CHIRALITY : 0.052 601 REMARK 3 PLANARITY : 0.009 708 REMARK 3 DIHEDRAL : 13.527 1469 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1684 THROUGH 1818 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9290 -2.3908 10.5232 REMARK 3 T TENSOR REMARK 3 T11: 0.1872 T22: 0.0893 REMARK 3 T33: 0.1606 T12: -0.0511 REMARK 3 T13: -0.0439 T23: 0.0334 REMARK 3 L TENSOR REMARK 3 L11: 0.8403 L22: 0.5340 REMARK 3 L33: 1.5464 L12: 0.0926 REMARK 3 L13: -0.3729 L23: -0.2313 REMARK 3 S TENSOR REMARK 3 S11: -0.0818 S12: -0.0448 S13: -0.2936 REMARK 3 S21: -0.0618 S22: 0.0662 S23: -0.0690 REMARK 3 S31: 0.4423 S32: -0.0758 S33: 0.1009 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1819 THROUGH 1945 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.0060 -9.3784 9.9968 REMARK 3 T TENSOR REMARK 3 T11: 0.2165 T22: 0.3728 REMARK 3 T33: 0.3740 T12: 0.2208 REMARK 3 T13: 0.0411 T23: 0.2396 REMARK 3 L TENSOR REMARK 3 L11: 1.4066 L22: 0.3566 REMARK 3 L33: 0.8722 L12: -0.1856 REMARK 3 L13: 0.3573 L23: -0.4203 REMARK 3 S TENSOR REMARK 3 S11: -0.0084 S12: -0.2075 S13: -0.4005 REMARK 3 S21: -0.1608 S22: -0.2514 S23: -0.2144 REMARK 3 S31: 0.4340 S32: 0.4860 S33: -0.3499 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1946 THROUGH 2059 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7448 17.7994 15.5046 REMARK 3 T TENSOR REMARK 3 T11: 0.1347 T22: 0.1009 REMARK 3 T33: 0.0898 T12: -0.0181 REMARK 3 T13: -0.0263 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 1.0330 L22: 1.3686 REMARK 3 L33: 1.3915 L12: -0.2610 REMARK 3 L13: -0.3240 L23: -0.2140 REMARK 3 S TENSOR REMARK 3 S11: 0.0220 S12: -0.1607 S13: 0.1097 REMARK 3 S21: 0.1847 S22: 0.0883 S23: -0.0477 REMARK 3 S31: -0.2254 S32: 0.0077 S33: -0.0514 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2060 THROUGH 2112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.5535 22.0101 10.8067 REMARK 3 T TENSOR REMARK 3 T11: 0.1483 T22: 0.1168 REMARK 3 T33: 0.1194 T12: 0.0450 REMARK 3 T13: 0.0370 T23: 0.0463 REMARK 3 L TENSOR REMARK 3 L11: 2.8461 L22: 3.4078 REMARK 3 L33: 1.4477 L12: -0.3372 REMARK 3 L13: 1.0472 L23: -0.2097 REMARK 3 S TENSOR REMARK 3 S11: -0.0317 S12: -0.0620 S13: 0.0180 REMARK 3 S21: -0.0677 S22: 0.1156 S23: 0.1607 REMARK 3 S31: -0.1083 S32: -0.2115 S33: -0.0541 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2113 THROUGH 2220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8238 13.4554 18.2463 REMARK 3 T TENSOR REMARK 3 T11: 0.1034 T22: 0.0911 REMARK 3 T33: 0.0823 T12: -0.0072 REMARK 3 T13: -0.0333 T23: 0.0221 REMARK 3 L TENSOR REMARK 3 L11: 1.5811 L22: 1.5495 REMARK 3 L33: 1.7295 L12: -0.1093 REMARK 3 L13: -0.3365 L23: -0.6547 REMARK 3 S TENSOR REMARK 3 S11: 0.0377 S12: -0.1076 S13: 0.0479 REMARK 3 S21: 0.1189 S22: 0.0953 S23: 0.0373 REMARK 3 S31: -0.1605 S32: -0.1254 S33: 0.0298 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 10 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.6440 3.5653 -6.0068 REMARK 3 T TENSOR REMARK 3 T11: 0.1508 T22: 0.2107 REMARK 3 T33: 0.1597 T12: -0.0356 REMARK 3 T13: -0.0589 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 4.0944 L22: 3.7407 REMARK 3 L33: 2.4798 L12: -3.2347 REMARK 3 L13: -2.9844 L23: 2.4982 REMARK 3 S TENSOR REMARK 3 S11: 0.3282 S12: 0.6346 S13: -0.1662 REMARK 3 S21: -0.6062 S22: -0.2123 S23: 0.2531 REMARK 3 S31: -0.0381 S32: -0.4515 S33: 0.1436 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FBY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000216351. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JAN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47718 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.898 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, AMMONIUM CITRATE TRIBASIC, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.77950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.87350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.44450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.87350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.77950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.44450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 1661 REMARK 465 LYS A 1662 REMARK 465 GLY A 1663 REMARK 465 LEU A 1664 REMARK 465 VAL A 1665 REMARK 465 ASN A 1666 REMARK 465 GLY A 1667 REMARK 465 ASN A 1668 REMARK 465 GLY A 1669 REMARK 465 THR A 1670 REMARK 465 GLU A 1671 REMARK 465 MET A 1672 REMARK 465 THR A 1673 REMARK 465 SER A 1674 REMARK 465 VAL A 1675 REMARK 465 GLN A 1676 REMARK 465 PHE A 1677 REMARK 465 PRO A 1678 REMARK 465 PRO A 1679 REMARK 465 PRO A 1680 REMARK 465 PRO A 1681 REMARK 465 ASN A 1682 REMARK 465 SER A 1750 REMARK 465 SER A 1751 REMARK 465 ARG A 1752 REMARK 465 ASP A 1753 REMARK 465 SER A 1754 REMARK 465 SER A 1755 REMARK 465 VAL A 1756 REMARK 465 ASP A 1757 REMARK 465 GLU A 1758 REMARK 465 THR A 1759 REMARK 465 ASP A 1760 REMARK 465 ARG A 1856 REMARK 465 GLN A 1857 REMARK 465 VAL A 1858 REMARK 465 GLY A 1859 REMARK 465 ARG A 1860 REMARK 465 GLY A 1861 REMARK 465 LYS A 1862 REMARK 465 LYS A 1863 REMARK 465 GLY A 1864 REMARK 465 LYS A 1865 REMARK 465 GLY A 1866 REMARK 465 VAL A 1867 REMARK 465 ALA A 1868 REMARK 465 GLY A 1869 REMARK 465 GLN A 1870 REMARK 465 THR A 1871 REMARK 465 GLU A 1948 REMARK 465 SER A 1949 REMARK 465 ASP A 1950 REMARK 465 GLN A 2001 REMARK 465 ILE A 2002 REMARK 465 GLN A 2003 REMARK 465 GLY A 2004 REMARK 465 GLU A 2005 REMARK 465 ASP A 2006 REMARK 465 SER A 2007 REMARK 465 GLU A 2008 REMARK 465 GLU A 2009 REMARK 465 GLU A 2010 REMARK 465 GLU A 2171 REMARK 465 LYS A 2172 REMARK 465 ASN A 2173 REMARK 465 GLY A 2174 REMARK 465 LYS A 2175 REMARK 465 LYS A 2176 REMARK 465 LYS A 2177 REMARK 465 ALA A 2178 REMARK 465 SER A 2221 REMARK 465 LYS A 2222 REMARK 465 ASP A 2223 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 SER B 3 REMARK 465 SER B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 LEU B 21 REMARK 465 GLY B 22 REMARK 465 SER B 23 REMARK 465 GLY B 24 REMARK 465 ARG B 25 REMARK 465 PRO B 26 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 1942 O HOH A 2401 1.93 REMARK 500 OD2 ASP A 1960 O HOH A 2402 1.95 REMARK 500 O HOH A 2753 O HOH A 2764 1.97 REMARK 500 O HOH A 2695 O HOH A 2707 1.99 REMARK 500 O HOH A 2587 O HOH A 2695 2.01 REMARK 500 O HOH A 2652 O HOH A 2730 2.02 REMARK 500 O HOH A 2603 O HOH A 2709 2.03 REMARK 500 O HOH A 2631 O HOH A 2747 2.03 REMARK 500 O HOH A 2510 O HOH A 2673 2.06 REMARK 500 O VAL A 1873 O HOH A 2403 2.13 REMARK 500 OE1 GLU A 1802 O HOH A 2404 2.15 REMARK 500 O HOH A 2611 O HOH A 2697 2.17 REMARK 500 O HOH A 2587 O HOH A 2707 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2728 O HOH A 2780 4555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A1706 -53.73 -124.73 REMARK 500 SER A1854 4.64 53.47 REMARK 500 HIS A1914 30.27 -95.20 REMARK 500 SER A2032 -13.63 78.19 REMARK 500 THR A2202 -62.70 -104.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FC2 RELATED DB: PDB REMARK 900 RELATED ID: 5FC3 RELATED DB: PDB DBREF 5FBY A 1661 2223 UNP G0SHM3 G0SHM3_CHATD 1661 2223 DBREF 5FBY B 1 26 PDB 5FBY 5FBY 1 26 SEQRES 1 A 563 LYS LYS GLY LEU VAL ASN GLY ASN GLY THR GLU MET THR SEQRES 2 A 563 SER VAL GLN PHE PRO PRO PRO PRO ASN LEU ALA ALA SER SEQRES 3 A 563 ALA PRO ARG ARG SER SER LEU GLY PHE THR LEU ASP LEU SEQRES 4 A 563 HIS ARG ILE GLN ARG ASP TYR ILE ASP LEU VAL PRO LYS SEQRES 5 A 563 HIS TRP HIS VAL ILE SER LEU SER LEU SER ASP GLY GLY SEQRES 6 A 563 HIS ASP LEU CYS ILE THR ARG LEU GLN ALA GLY GLN ALA SEQRES 7 A 563 PRO PHE VAL LEU ARG LEU PRO LEU GLU ARG ALA SER SER SEQRES 8 A 563 ARG ASP SER SER VAL ASP GLU THR ASP VAL PHE ASP PHE SEQRES 9 A 563 HIS THR GLY ARG ALA GLU LEU LEU GLU ILE ILE LYS GLU SEQRES 10 A 563 ILE ASN ARG THR CYS HIS ASP SER ARG ASP MET ALA ALA SEQRES 11 A 563 LYS GLY GLU ARG GLU LYS TRP TRP ALA GLU ARG GLU ALA SEQRES 12 A 563 LEU ASP GLN ARG LEU LYS GLU LEU LEU MET ASN ILE GLU SEQRES 13 A 563 HIS VAL TRP LEU GLY GLY PHE ARG GLY VAL PHE SER GLN SEQRES 14 A 563 HIS GLY ARG ARG PRO GLU LEU LEU GLU LYS PHE ARG ALA SEQRES 15 A 563 MET PHE GLU GLY VAL LEU ASP LYS HIS LEU PRO SER ARG SEQRES 16 A 563 ARG GLN VAL GLY ARG GLY LYS LYS GLY LYS GLY VAL ALA SEQRES 17 A 563 GLY GLN THR LYS VAL VAL LEU ASP GLY ASN VAL LEU GLU SEQRES 18 A 563 LEU PHE ILE GLY LEU GLY ASP ALA THR LYS SER GLY ALA SEQRES 19 A 563 ASP PHE ASP GLU GLU LEU THR ASP LEU LEU TYR PHE VAL SEQRES 20 A 563 VAL ASP ILE LEU GLN PHE HIS GLY GLU ARG ASN ALA TYR SEQRES 21 A 563 ASP GLU ILE ASP PHE ASP SER MET VAL VAL GLU THR MET SEQRES 22 A 563 ASP ALA LEU MET ALA TYR HIS ALA GLU ALA ASN ALA ALA SEQRES 23 A 563 PRO GLU SER ASP SER HIS ALA HIS THR ILE LEU VAL LEU SEQRES 24 A 563 ASP LYS GLN LEU HIS VAL PHE PRO TRP GLU SER LEU PRO SEQRES 25 A 563 CYS LEU GLN GLY LEU ALA VAL SER ARG ILE PRO SER LEU SEQRES 26 A 563 ALA CYS LEU ARG LYS LEU LEU LEU ASP ARG ARG ARG SER SEQRES 27 A 563 SER SER GLN ILE GLN GLY GLU ASP SER GLU GLU GLU ASP SEQRES 28 A 563 PRO ARG SER ALA GLY HIS HIS ALA PRO LEU SER GLY GLY SEQRES 29 A 563 THR TYR ILE LEU ASN PRO SER SER ASP LEU LEU SER THR SEQRES 30 A 563 GLN LYS THR PHE GLU SER LEU PHE SER THR HIS LEU HIS SEQRES 31 A 563 SER PRO ASN SER TRP THR ARG ILE ILE SER ARG PRO PRO SEQRES 32 A 563 THR GLU PRO GLU PHE LEU SER ALA LEU THR HIS SER PRO SEQRES 33 A 563 ILE LEU LEU TYR PHE GLY HIS GLY SER GLY ALA GLN TYR SEQRES 34 A 563 ILE ARG SER ARG ASN ILE ARG HIS LEU ASP HIS CYS ARG SEQRES 35 A 563 ALA THR VAL LEU LEU MET GLY CYS SER SER ALA ALA LEU SEQRES 36 A 563 THR ALA LYS GLY GLU PHE GLU PRO SER GLY PRO VAL TRP SEQRES 37 A 563 ASN TYR MET LEU ALA GLY ALA PRO ALA VAL VAL GLY THR SEQRES 38 A 563 LEU TRP ASP VAL THR ASP ARG ASP ILE ASP ARG PHE ALA SEQRES 39 A 563 GLY GLY VAL LEU GLU GLY TRP GLY VAL LEU PRO GLU GLY SEQRES 40 A 563 CYS MET GLY GLU LYS ASN GLY LYS LYS LYS ALA GLY ARG SEQRES 41 A 563 ASN GLY LEU SER LEU VAL GLN ALA VAL ALA LYS ALA ARG SEQRES 42 A 563 ASP ARG CYS ARG PHE ARG TYR VAL THR ALA ALA ALA ALA SEQRES 43 A 563 VAL VAL TYR GLY ILE PRO VAL TYR VAL ASP VAL ASP GLY SEQRES 44 A 563 LYS SER LYS ASP SEQRES 1 B 26 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN LEU SEQRES 2 B 26 GLU VAL LEU PHE GLN GLY PRO LEU GLY SER GLY ARG PRO FORMUL 3 HOH *394(H2 O) HELIX 1 AA1 SER A 1692 TYR A 1706 1 15 HELIX 2 AA2 ILE A 1707 VAL A 1710 5 4 HELIX 3 AA3 ASP A 1763 ASP A 1784 1 22 HELIX 4 AA4 ASP A 1784 LYS A 1791 1 8 HELIX 5 AA5 GLU A 1793 TRP A 1819 1 27 HELIX 6 AA6 LEU A 1820 SER A 1828 5 9 HELIX 7 AA7 ARG A 1833 LEU A 1852 1 20 HELIX 8 AA8 ASP A 1876 GLY A 1885 1 10 HELIX 9 AA9 PHE A 1896 HIS A 1914 1 19 HELIX 10 AB1 ALA A 1919 ILE A 1923 5 5 HELIX 11 AB2 ASP A 1924 ALA A 1946 1 23 HELIX 12 AB3 PRO A 1967 LEU A 1971 5 5 HELIX 13 AB4 SER A 1984 ASP A 1994 1 11 HELIX 14 AB5 ASP A 2011 GLY A 2016 5 6 HELIX 15 AB6 LEU A 2034 LEU A 2049 1 16 HELIX 16 AB7 LEU A 2049 SER A 2054 1 6 HELIX 17 AB8 THR A 2064 SER A 2075 1 12 HELIX 18 AB9 ARG A 2091 HIS A 2097 1 7 HELIX 19 AC1 GLY A 2125 GLY A 2134 1 10 HELIX 20 AC2 THR A 2146 TRP A 2161 1 16 HELIX 21 AC3 SER A 2184 ARG A 2193 1 10 HELIX 22 AC4 ASP A 2194 CYS A 2196 5 3 HELIX 23 AC5 THR A 2202 ALA A 2204 5 3 HELIX 24 AC6 LEU B 13 GLN B 18 5 6 SHEET 1 AA1 5 PHE A1740 PRO A1745 0 SHEET 2 AA1 5 ASP A1727 LEU A1733 -1 N ILE A1730 O LEU A1742 SHEET 3 AA1 5 TRP A1714 LEU A1721 -1 N SER A1720 O CYS A1729 SHEET 4 AA1 5 HIS A1954 LEU A1959 1 O ILE A1956 N HIS A1715 SHEET 5 AA1 5 VAL A1979 ARG A1981 1 O SER A1980 N LEU A1957 SHEET 1 AA2 2 HIS A2017 PRO A2020 0 SHEET 2 AA2 2 VAL A2213 ASP A2216 1 O TYR A2214 N HIS A2017 SHEET 1 AA3 6 THR A2056 ILE A2059 0 SHEET 2 AA3 6 THR A2025 LEU A2028 1 N LEU A2028 O ILE A2058 SHEET 3 AA3 6 ILE A2077 PHE A2081 1 O PHE A2081 N ILE A2027 SHEET 4 AA3 6 THR A2104 LEU A2107 1 O THR A2104 N LEU A2078 SHEET 5 AA3 6 ALA A2137 THR A2141 1 O VAL A2139 N LEU A2107 SHEET 6 AA3 6 ALA A2206 GLY A2210 -1 O TYR A2209 N VAL A2138 CISPEP 1 PRO A 1853 SER A 1854 0 -12.35 CRYST1 55.559 98.889 107.747 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017999 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010112 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009281 0.00000