HEADER METAL BINDING PROTEIN 15-DEC-15 5FC9 TITLE NOVEL PURPLE CUPREDOXIN FROM NITROSOPUMILUS MARITIMUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: BLUE (TYPE 1) COPPER DOMAIN PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: PROTEIN CONTAINING CU IONS SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NITROSOPUMILUS MARITIMUS (STRAIN SCM1); SOURCE 3 ORGANISM_TAXID: 436308; SOURCE 4 STRAIN: SCM1; SOURCE 5 GENE: NMAR_1307; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS CUPREDOXIN, NO OXIDATION, NITROGEN CYCLE, OPEN TYPE 1 COPPER SITE, KEYWDS 2 METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.HOSSEINZADEH,Y.LU,H.ROBINSON,Y.-G.GAO REVDAT 5 27-SEP-23 5FC9 1 LINK REVDAT 4 27-NOV-19 5FC9 1 REMARK REVDAT 3 20-SEP-17 5FC9 1 REMARK REVDAT 2 08-JUN-16 5FC9 1 JRNL REVDAT 1 11-MAY-16 5FC9 0 JRNL AUTH P.HOSSEINZADEH,S.TIAN,N.M.MARSHALL,J.HEMP,T.MULLEN, JRNL AUTH 2 M.J.NILGES,Y.G.GAO,H.ROBINSON,D.A.STAHL,R.B.GENNIS,Y.LU JRNL TITL A PURPLE CUPREDOXIN FROM NITROSOPUMILUS MARITIMUS CONTAINING JRNL TITL 2 A MONONUCLEAR TYPE 1 COPPER CENTER WITH AN OPEN BINDING JRNL TITL 3 SITE. JRNL REF J.AM.CHEM.SOC. V. 138 6324 2016 JRNL REFN ESSN 1520-5126 JRNL PMID 27120678 JRNL DOI 10.1021/JACS.5B13128 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.350 REMARK 3 FREE R VALUE TEST SET COUNT : 3747 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.8892 - 4.7968 1.00 4005 140 0.1632 0.1964 REMARK 3 2 4.7968 - 3.8080 1.00 4005 140 0.1402 0.1439 REMARK 3 3 3.8080 - 3.3268 1.00 4025 140 0.1489 0.1809 REMARK 3 4 3.3268 - 3.0227 1.00 3989 135 0.1699 0.1663 REMARK 3 5 3.0227 - 2.8060 1.00 4045 137 0.1758 0.2116 REMARK 3 6 2.8060 - 2.6406 1.00 3960 136 0.1863 0.2114 REMARK 3 7 2.6406 - 2.5084 1.00 4054 137 0.1905 0.2259 REMARK 3 8 2.5084 - 2.3992 1.00 3993 138 0.1888 0.2019 REMARK 3 9 2.3992 - 2.3068 1.00 4000 143 0.1736 0.2309 REMARK 3 10 2.3068 - 2.2272 1.00 4007 138 0.1699 0.1871 REMARK 3 11 2.2272 - 2.1576 1.00 4013 137 0.1750 0.1815 REMARK 3 12 2.1576 - 2.0959 1.00 4017 138 0.1726 0.1758 REMARK 3 13 2.0959 - 2.0408 1.00 4012 139 0.1738 0.1924 REMARK 3 14 2.0408 - 1.9910 1.00 4002 138 0.1807 0.2053 REMARK 3 15 1.9910 - 1.9457 1.00 4017 137 0.1837 0.2020 REMARK 3 16 1.9457 - 1.9043 1.00 4015 139 0.1802 0.2267 REMARK 3 17 1.9043 - 1.8662 1.00 4003 138 0.1956 0.2505 REMARK 3 18 1.8662 - 1.8310 1.00 4004 134 0.1997 0.2254 REMARK 3 19 1.8310 - 1.7983 1.00 4016 142 0.1994 0.2637 REMARK 3 20 1.7983 - 1.7678 1.00 3952 140 0.2029 0.2391 REMARK 3 21 1.7678 - 1.7393 1.00 4041 143 0.2036 0.2581 REMARK 3 22 1.7393 - 1.7125 1.00 4022 145 0.2140 0.2415 REMARK 3 23 1.7125 - 1.6873 1.00 4004 136 0.2048 0.2482 REMARK 3 24 1.6873 - 1.6636 1.00 4048 141 0.1959 0.2206 REMARK 3 25 1.6636 - 1.6411 1.00 3958 137 0.1981 0.2074 REMARK 3 26 1.6411 - 1.6198 1.00 4027 139 0.2057 0.2835 REMARK 3 27 1.6198 - 1.5995 0.99 3934 140 0.2084 0.2404 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3104 REMARK 3 ANGLE : 1.068 4264 REMARK 3 CHIRALITY : 0.043 468 REMARK 3 PLANARITY : 0.006 564 REMARK 3 DIHEDRAL : 12.635 1080 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FC9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000216289. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59707 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 29.50 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 28.10 REMARK 200 R MERGE FOR SHELL (I) : 0.71900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4AZU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS OF N. MAR_1307 WERE GROWN BY REMARK 280 THE HANGING DROP VAPOR DIFFUSION METHOD. PROTEIN SOLUTION WAS REMARK 280 PREPARED IN 50 MM SODIUM ACETATE BUFFER AT PH 6.0 TO A REMARK 280 CONCENTRATION OF ABOUT 2 MM. A 2 UL PORTION OF THIS PROTEIN REMARK 280 SOLUTION WAS THEN MIXED WITH 2 UL OF A WELL BUFFER SOLUTION REMARK 280 CONSISTING OF 0.1 M TRISHCL AT PH 8.0, 20MM CUSO4, 0.1M LINO3 REMARK 280 AND VARYING AMOUNTS OF POLYETHYLENE GLYCOL (PEG). THE HIGHEST REMARK 280 QUALITY CRYSTALS FORMED FROM WELLS WITH 35 % W/V PEG 4000 AFTER REMARK 280 ABOUT 2 MONTHS AT 4 C, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 92.22500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.44350 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.44350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.11250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.44350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.44350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 138.33750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.44350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.44350 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 46.11250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.44350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.44350 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 138.33750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 92.22500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -92.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1503 O HOH A 1600 2.10 REMARK 500 O HOH B 2507 O HOH C 3584 2.12 REMARK 500 O HOH C 3606 O HOH C 3613 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A1057 -56.84 -155.65 REMARK 500 VAL B2014 32.93 -98.03 REMARK 500 GLN B2056 51.81 -108.64 REMARK 500 ALA C3003 79.78 58.49 REMARK 500 GLN C3056 45.66 -102.42 REMARK 500 ALA D4003 61.92 -116.23 REMARK 500 VAL D4014 38.88 -95.24 REMARK 500 LEU D4057 -56.73 -154.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2660 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH B2661 DISTANCE = 6.17 ANGSTROMS REMARK 525 HOH C3657 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH C3658 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH C3659 DISTANCE = 6.55 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A1401 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A1043 ND1 REMARK 620 2 CYS A1083 SG 130.3 REMARK 620 3 HIS A1086 ND1 98.9 116.6 REMARK 620 4 HOH A1508 O 93.9 103.1 111.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B2401 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B2043 ND1 REMARK 620 2 CYS B2083 SG 128.4 REMARK 620 3 HIS B2086 ND1 96.4 119.4 REMARK 620 4 HOH B2514 O 97.1 104.0 108.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B2402 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B2071 ND1 REMARK 620 2 HOH B2560 O 120.4 REMARK 620 3 GLU C3075 OE1 21.9 108.7 REMARK 620 4 GLU C3075 OE2 23.8 109.1 2.5 REMARK 620 5 HOH C3593 O 169.3 63.9 168.6 166.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU C3401 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C3043 ND1 REMARK 620 2 CYS C3083 SG 132.1 REMARK 620 3 HIS C3086 ND1 98.1 116.2 REMARK 620 4 HOH C3507 O 94.0 101.7 112.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU D4401 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D4043 ND1 REMARK 620 2 CYS D4083 SG 130.0 REMARK 620 3 HIS D4086 ND1 96.4 117.0 REMARK 620 4 HOH D4504 O 97.1 103.3 111.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 1401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU B 2401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU B 2402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU C 3401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU D 4401 DBREF 5FC9 A 1002 1096 UNP A9A2G4 A9A2G4_NITMS 80 174 DBREF 5FC9 B 2002 2096 UNP A9A2G4 A9A2G4_NITMS 80 174 DBREF 5FC9 C 3002 3096 UNP A9A2G4 A9A2G4_NITMS 80 174 DBREF 5FC9 D 4002 4096 UNP A9A2G4 A9A2G4_NITMS 80 174 SEQRES 1 A 95 ASP ALA GLN ILE ILE ILE PRO ASN GLY ASN TYR ASP VAL SEQRES 2 A 95 THR GLY ALA GLY PHE TYR SER PRO LEU ASN LEU GLU ILE SEQRES 3 A 95 PRO VAL GLY THR THR VAL THR TRP THR ASN ASP ASP SER SEQRES 4 A 95 VAL PRO HIS ASN ILE GLN SER ILE ASP VAL ASN GLY LYS SEQRES 5 A 95 VAL ILE GLN LEU PHE ASN SER PRO PRO LEU ASN THR GLY SEQRES 6 A 95 ASP ARG PHE GLU HIS VAL PHE GLU GLU GLU GLY VAL TYR SEQRES 7 A 95 LYS TYR TYR CYS SER PHE HIS PRO TRP ARG VAL GLY LEU SEQRES 8 A 95 VAL THR VAL SER SEQRES 1 B 95 ASP ALA GLN ILE ILE ILE PRO ASN GLY ASN TYR ASP VAL SEQRES 2 B 95 THR GLY ALA GLY PHE TYR SER PRO LEU ASN LEU GLU ILE SEQRES 3 B 95 PRO VAL GLY THR THR VAL THR TRP THR ASN ASP ASP SER SEQRES 4 B 95 VAL PRO HIS ASN ILE GLN SER ILE ASP VAL ASN GLY LYS SEQRES 5 B 95 VAL ILE GLN LEU PHE ASN SER PRO PRO LEU ASN THR GLY SEQRES 6 B 95 ASP ARG PHE GLU HIS VAL PHE GLU GLU GLU GLY VAL TYR SEQRES 7 B 95 LYS TYR TYR CYS SER PHE HIS PRO TRP ARG VAL GLY LEU SEQRES 8 B 95 VAL THR VAL SER SEQRES 1 C 95 ASP ALA GLN ILE ILE ILE PRO ASN GLY ASN TYR ASP VAL SEQRES 2 C 95 THR GLY ALA GLY PHE TYR SER PRO LEU ASN LEU GLU ILE SEQRES 3 C 95 PRO VAL GLY THR THR VAL THR TRP THR ASN ASP ASP SER SEQRES 4 C 95 VAL PRO HIS ASN ILE GLN SER ILE ASP VAL ASN GLY LYS SEQRES 5 C 95 VAL ILE GLN LEU PHE ASN SER PRO PRO LEU ASN THR GLY SEQRES 6 C 95 ASP ARG PHE GLU HIS VAL PHE GLU GLU GLU GLY VAL TYR SEQRES 7 C 95 LYS TYR TYR CYS SER PHE HIS PRO TRP ARG VAL GLY LEU SEQRES 8 C 95 VAL THR VAL SER SEQRES 1 D 95 ASP ALA GLN ILE ILE ILE PRO ASN GLY ASN TYR ASP VAL SEQRES 2 D 95 THR GLY ALA GLY PHE TYR SER PRO LEU ASN LEU GLU ILE SEQRES 3 D 95 PRO VAL GLY THR THR VAL THR TRP THR ASN ASP ASP SER SEQRES 4 D 95 VAL PRO HIS ASN ILE GLN SER ILE ASP VAL ASN GLY LYS SEQRES 5 D 95 VAL ILE GLN LEU PHE ASN SER PRO PRO LEU ASN THR GLY SEQRES 6 D 95 ASP ARG PHE GLU HIS VAL PHE GLU GLU GLU GLY VAL TYR SEQRES 7 D 95 LYS TYR TYR CYS SER PHE HIS PRO TRP ARG VAL GLY LEU SEQRES 8 D 95 VAL THR VAL SER HET CU A1401 1 HET CU B2401 1 HET CU B2402 1 HET CU C3401 1 HET CU D4401 1 HETNAM CU COPPER (II) ION FORMUL 5 CU 5(CU 2+) FORMUL 10 HOH *582(H2 O) SHEET 1 AA1 3 GLN A1004 ILE A1007 0 SHEET 2 AA1 3 THR A1031 ASN A1037 1 O THR A1036 N ILE A1007 SHEET 3 AA1 3 ARG A1068 PHE A1073 -1 O PHE A1069 N TRP A1035 SHEET 1 AA2 5 ASN A1024 ILE A1027 0 SHEET 2 AA2 5 VAL A1090 VAL A1095 1 O THR A1094 N LEU A1025 SHEET 3 AA2 5 GLY A1077 TYR A1082 -1 N TYR A1079 O VAL A1093 SHEET 4 AA2 5 GLN A1046 ILE A1048 -1 N GLN A1046 O TYR A1082 SHEET 5 AA2 5 VAL A1054 ASN A1059 -1 O ILE A1055 N SER A1047 SHEET 1 AA3 3 ALA B2003 ILE B2007 0 SHEET 2 AA3 3 THR B2031 ASN B2037 1 O THR B2036 N ILE B2007 SHEET 3 AA3 3 ARG B2068 PHE B2073 -1 O PHE B2069 N TRP B2035 SHEET 1 AA4 5 ASN B2024 PRO B2028 0 SHEET 2 AA4 5 GLY B2091 SER B2096 1 O THR B2094 N LEU B2025 SHEET 3 AA4 5 GLY B2077 TYR B2082 -1 N GLY B2077 O VAL B2095 SHEET 4 AA4 5 GLN B2046 ILE B2048 -1 N GLN B2046 O TYR B2082 SHEET 5 AA4 5 VAL B2054 ASN B2059 -1 O PHE B2058 N SER B2047 SHEET 1 AA5 3 GLN C3004 ILE C3007 0 SHEET 2 AA5 3 THR C3031 ASN C3037 1 O THR C3036 N ILE C3007 SHEET 3 AA5 3 ARG C3068 PHE C3073 -1 O PHE C3069 N TRP C3035 SHEET 1 AA6 5 ASN C3024 PRO C3028 0 SHEET 2 AA6 5 VAL C3090 SER C3096 1 O THR C3094 N LEU C3025 SHEET 3 AA6 5 GLY C3077 TYR C3082 -1 N GLY C3077 O VAL C3095 SHEET 4 AA6 5 GLN C3046 ILE C3048 -1 N GLN C3046 O TYR C3082 SHEET 5 AA6 5 VAL C3054 ASN C3059 -1 O PHE C3058 N SER C3047 SHEET 1 AA7 3 GLN D4004 ILE D4007 0 SHEET 2 AA7 3 THR D4031 ASN D4037 1 O THR D4034 N ILE D4005 SHEET 3 AA7 3 ARG D4068 PHE D4073 -1 O PHE D4069 N TRP D4035 SHEET 1 AA8 5 ASN D4024 PRO D4028 0 SHEET 2 AA8 5 GLY D4091 SER D4096 1 O THR D4094 N LEU D4025 SHEET 3 AA8 5 GLY D4077 TYR D4082 -1 N GLY D4077 O VAL D4095 SHEET 4 AA8 5 GLN D4046 ILE D4048 -1 N GLN D4046 O TYR D4082 SHEET 5 AA8 5 VAL D4054 ASN D4059 -1 O PHE D4058 N SER D4047 LINK ND1 HIS A1043 CU CU A1401 1555 1555 1.98 LINK SG CYS A1083 CU CU A1401 1555 1555 2.23 LINK ND1 HIS A1086 CU CU A1401 1555 1555 2.06 LINK CU CU A1401 O HOH A1508 1555 1555 2.24 LINK ND1 HIS B2043 CU CU B2401 1555 1555 2.03 LINK ND1 HIS B2071 CU CU B2402 1555 1555 2.00 LINK SG CYS B2083 CU CU B2401 1555 1555 2.26 LINK ND1 HIS B2086 CU CU B2401 1555 1555 2.06 LINK CU CU B2401 O HOH B2514 1555 1555 2.21 LINK CU CU B2402 O HOH B2560 1555 1555 2.37 LINK CU CU B2402 OE1 GLU C3075 6544 1555 2.59 LINK CU CU B2402 OE2 GLU C3075 6544 1555 2.43 LINK CU CU B2402 O HOH C3593 1555 6444 2.20 LINK ND1 HIS C3043 CU CU C3401 1555 1555 1.99 LINK SG CYS C3083 CU CU C3401 1555 1555 2.26 LINK ND1 HIS C3086 CU CU C3401 1555 1555 2.07 LINK CU CU C3401 O HOH C3507 1555 1555 2.26 LINK ND1 HIS D4043 CU CU D4401 1555 1555 2.03 LINK SG CYS D4083 CU CU D4401 1555 1555 2.25 LINK ND1 HIS D4086 CU CU D4401 1555 1555 2.08 LINK CU CU D4401 O HOH D4504 1555 1555 2.18 CISPEP 1 SER A 1021 PRO A 1022 0 -0.14 CISPEP 2 SER B 2021 PRO B 2022 0 -0.75 CISPEP 3 SER C 3021 PRO C 3022 0 -0.58 CISPEP 4 SER D 4021 PRO D 4022 0 -1.55 SITE 1 AC1 4 HIS A1043 CYS A1083 HIS A1086 HOH A1508 SITE 1 AC2 4 HIS B2043 CYS B2083 HIS B2086 HOH B2514 SITE 1 AC3 5 HIS B2071 HOH B2559 HOH B2560 GLU C3075 SITE 2 AC3 5 HOH C3593 SITE 1 AC4 4 HIS C3043 CYS C3083 HIS C3086 HOH C3507 SITE 1 AC5 4 HIS D4043 CYS D4083 HIS D4086 HOH D4504 CRYST1 68.887 68.887 184.450 90.00 90.00 90.00 P 41 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014517 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014517 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005422 0.00000