HEADER METAL BINDING PROTEIN 18-DEC-15 5FFI TITLE [2FE:2S] FERREDOXIN FESII FROM AZOTOBACTER VINELANDII COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIMERIC (2FE-2S) PROTEIN; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 SYNONYM: FERREDOXIN FESII; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AZOTOBACTER VINELANDII; SOURCE 3 ORGANISM_TAXID: 354; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FERREDOXIN, NITROGEN FIXATION, SHETHNA PROTEIN II, FESII, KEYWDS 2 NITROGENASE, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.SCHLESIER,M.ROHDE,S.GERHARDT,O.EINSLE REVDAT 5 07-JUN-17 5FFI 1 REMARK REVDAT 4 10-MAY-17 5FFI 1 REMARK REVDAT 3 29-MAR-17 5FFI 1 REMARK REVDAT 2 20-JAN-16 5FFI 1 JRNL REVDAT 1 13-JAN-16 5FFI 0 JRNL AUTH J.SCHLESIER,M.ROHDE,S.GERHARDT,O.EINSLE JRNL TITL A CONFORMATIONAL SWITCH TRIGGERS NITROGENASE PROTECTION FROM JRNL TITL 2 OXYGEN DAMAGE BY SHETHNA PROTEIN II (FESII). JRNL REF J.AM.CHEM.SOC. V. 138 239 2016 JRNL REFN ESSN 1520-5126 JRNL PMID 26654855 JRNL DOI 10.1021/JACS.5B10341 REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 94.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 36023 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.680 REMARK 3 FREE R VALUE TEST SET COUNT : 1687 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 18 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.23 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.93 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2853 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2085 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2702 REMARK 3 BIN R VALUE (WORKING SET) : 0.2087 REMARK 3 BIN FREE R VALUE : 0.2046 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.29 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 151 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4357 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 152 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.70060 REMARK 3 B22 (A**2) : 3.74690 REMARK 3 B33 (A**2) : -3.04620 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.298 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.218 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.176 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.212 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.175 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4435 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5975 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1589 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 115 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 621 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4435 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 590 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4767 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.12 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.19 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.95 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -27.1905 45.6631 -8.1330 REMARK 3 T TENSOR REMARK 3 T11: -0.0226 T22: -0.1483 REMARK 3 T33: -0.0415 T12: 0.0329 REMARK 3 T13: -0.1089 T23: 0.0370 REMARK 3 L TENSOR REMARK 3 L11: 1.5269 L22: 2.2410 REMARK 3 L33: 0.9466 L12: -1.2468 REMARK 3 L13: 0.1016 L23: 0.5263 REMARK 3 S TENSOR REMARK 3 S11: 0.0102 S12: 0.0617 S13: 0.0126 REMARK 3 S21: -0.0285 S22: 0.1750 S23: 0.2639 REMARK 3 S31: 0.1466 S32: 0.0318 S33: -0.1852 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -20.4530 36.8199 7.4317 REMARK 3 T TENSOR REMARK 3 T11: -0.0271 T22: -0.1362 REMARK 3 T33: -0.0450 T12: 0.0155 REMARK 3 T13: -0.0133 T23: 0.0663 REMARK 3 L TENSOR REMARK 3 L11: 1.0546 L22: 3.6279 REMARK 3 L33: 0.7383 L12: -1.8857 REMARK 3 L13: -0.2058 L23: 0.4314 REMARK 3 S TENSOR REMARK 3 S11: 0.1594 S12: -0.1020 S13: -0.2124 REMARK 3 S21: -0.3382 S22: -0.0427 S23: 0.1925 REMARK 3 S31: -0.0372 S32: 0.0687 S33: -0.1168 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): -50.5426 20.5945 -0.2810 REMARK 3 T TENSOR REMARK 3 T11: -0.2496 T22: -0.0852 REMARK 3 T33: -0.0435 T12: 0.1624 REMARK 3 T13: -0.0075 T23: -0.1030 REMARK 3 L TENSOR REMARK 3 L11: 1.7619 L22: 3.4693 REMARK 3 L33: 4.3958 L12: -1.0658 REMARK 3 L13: -0.2695 L23: -1.3324 REMARK 3 S TENSOR REMARK 3 S11: 0.0633 S12: 0.0015 S13: 0.4983 REMARK 3 S21: -0.0407 S22: 0.1065 S23: -0.0626 REMARK 3 S31: -0.6109 S32: -1.0186 S33: -0.1697 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): -40.8647 15.0282 -16.0244 REMARK 3 T TENSOR REMARK 3 T11: -0.1636 T22: -0.1832 REMARK 3 T33: -0.1010 T12: 0.0504 REMARK 3 T13: 0.0217 T23: 0.0186 REMARK 3 L TENSOR REMARK 3 L11: 6.5040 L22: 1.2863 REMARK 3 L33: 3.0412 L12: -2.0102 REMARK 3 L13: -0.7551 L23: 0.4643 REMARK 3 S TENSOR REMARK 3 S11: 0.3085 S12: 0.4019 S13: 0.4556 REMARK 3 S21: -0.1769 S22: -0.0722 S23: -0.1397 REMARK 3 S31: -0.3311 S32: -0.3652 S33: -0.2363 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { E|* } REMARK 3 ORIGIN FOR THE GROUP (A): -12.6982 3.4065 8.9114 REMARK 3 T TENSOR REMARK 3 T11: -0.1472 T22: -0.0921 REMARK 3 T33: -0.0383 T12: 0.0276 REMARK 3 T13: -0.0485 T23: 0.0327 REMARK 3 L TENSOR REMARK 3 L11: 7.7225 L22: 2.3023 REMARK 3 L33: 1.3308 L12: 1.5109 REMARK 3 L13: 1.9761 L23: -0.2035 REMARK 3 S TENSOR REMARK 3 S11: -0.3167 S12: 0.1446 S13: 0.4582 REMARK 3 S21: -0.2308 S22: 0.2451 S23: 0.3308 REMARK 3 S31: 0.0277 S32: 0.0787 S33: 0.0716 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FFI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1000216501. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0003 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC, XDS (VERSION MARCH 1) REMARK 200 DATA SCALING SOFTWARE : AIMLESS (VERSION 0.5.12), CCP4 REMARK 200 6.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36128 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.169 REMARK 200 RESOLUTION RANGE LOW (A) : 94.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : 0.14900 REMARK 200 R SYM (I) : 0.14900 REMARK 200 FOR THE DATA SET : 13.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.50 REMARK 200 R MERGE FOR SHELL (I) : 1.38000 REMARK 200 R SYM FOR SHELL (I) : 1.38000 REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 M OF TRI-SODIUM CITRATE 0.01 M REMARK 280 SODIUM TETRABORATE (NA2B4O7), PH 8, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 66.63550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 67.24000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 66.63550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 67.24000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 36.76900 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -36.76900 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -36.76900 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 36.76900 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 120 REMARK 465 GLY A 121 REMARK 465 ALA A 122 REMARK 465 MET B 1 REMARK 465 LYS B 23 REMARK 465 ARG B 24 REMARK 465 GLY B 120 REMARK 465 GLY B 121 REMARK 465 ALA B 122 REMARK 465 MET C 1 REMARK 465 GLY C 22 REMARK 465 PRO C 119 REMARK 465 GLY C 120 REMARK 465 GLY C 121 REMARK 465 ALA C 122 REMARK 465 MET D 1 REMARK 465 ALA D 90 REMARK 465 VAL D 91 REMARK 465 GLY D 121 REMARK 465 ALA D 122 REMARK 465 MET E 1 REMARK 465 LYS E 63 REMARK 465 GLY E 64 REMARK 465 MET E 65 REMARK 465 LYS E 83 REMARK 465 SER E 84 REMARK 465 GLU E 85 REMARK 465 GLU E 86 REMARK 465 GLU E 87 REMARK 465 ARG E 88 REMARK 465 ALA E 89 REMARK 465 ALA E 90 REMARK 465 VAL E 91 REMARK 465 ARG E 92 REMARK 465 GLY E 117 REMARK 465 GLU E 118 REMARK 465 PRO E 119 REMARK 465 GLY E 120 REMARK 465 GLY E 121 REMARK 465 ALA E 122 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU E 60 CG CD OE1 OE2 REMARK 470 ILE E 62 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 107 -158.31 -108.77 REMARK 500 THR B 107 -158.57 -106.20 REMARK 500 THR C 107 -157.82 -108.15 REMARK 500 THR D 107 -148.26 -108.88 REMARK 500 LYS E 80 51.74 -118.97 REMARK 500 LEU E 81 52.72 -111.57 REMARK 500 THR E 107 -160.65 -109.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A1001 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 42 SG REMARK 620 2 FES A1001 S1 108.9 REMARK 620 3 FES A1001 S2 118.4 103.8 REMARK 620 4 CYS A 47 SG 102.7 112.4 110.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A1001 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 50 SG REMARK 620 2 FES A1001 S1 114.6 REMARK 620 3 FES A1001 S2 117.9 104.3 REMARK 620 4 CYS A 102 SG 97.1 105.9 116.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B1001 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 42 SG REMARK 620 2 FES B1001 S1 118.0 REMARK 620 3 FES B1001 S2 107.3 104.2 REMARK 620 4 CYS B 47 SG 99.8 113.2 114.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B1001 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 50 SG REMARK 620 2 FES B1001 S1 117.5 REMARK 620 3 FES B1001 S2 116.1 104.4 REMARK 620 4 CYS B 102 SG 96.7 115.7 106.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES C1001 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 42 SG REMARK 620 2 FES C1001 S1 117.6 REMARK 620 3 FES C1001 S2 107.7 104.3 REMARK 620 4 CYS C 47 SG 100.4 113.7 113.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES C1001 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 50 SG REMARK 620 2 FES C1001 S1 115.4 REMARK 620 3 FES C1001 S2 121.9 104.2 REMARK 620 4 CYS C 102 SG 93.5 115.6 106.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES D1001 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 42 SG REMARK 620 2 FES D1001 S1 118.7 REMARK 620 3 FES D1001 S2 106.7 104.3 REMARK 620 4 CYS D 47 SG 100.8 112.7 113.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES D1001 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 50 SG REMARK 620 2 FES D1001 S1 114.5 REMARK 620 3 FES D1001 S2 115.8 104.3 REMARK 620 4 CYS D 102 SG 99.6 117.0 105.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES E1001 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS E 42 SG REMARK 620 2 FES E1001 S1 119.5 REMARK 620 3 FES E1001 S2 108.7 104.0 REMARK 620 4 CYS E 47 SG 99.1 110.6 115.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES E1001 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS E 50 SG REMARK 620 2 FES E1001 S1 112.9 REMARK 620 3 FES E1001 S2 116.4 104.4 REMARK 620 4 CYS E 102 SG 100.1 114.5 109.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FES A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FES B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FES C 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FES D 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FES E 1001 DBREF 5FFI A 1 122 UNP Q44501 Q44501_AZOVI 1 122 DBREF 5FFI B 1 122 UNP Q44501 Q44501_AZOVI 1 122 DBREF 5FFI C 1 122 UNP Q44501 Q44501_AZOVI 1 122 DBREF 5FFI D 1 122 UNP Q44501 Q44501_AZOVI 1 122 DBREF 5FFI E 1 122 UNP Q44501 Q44501_AZOVI 1 122 SEQRES 1 A 122 MET ALA THR ILE TYR PHE SER SER PRO LEU MET PRO HIS SEQRES 2 A 122 ASN LYS LYS VAL GLN ALA VAL ALA GLY LYS ARG SER THR SEQRES 3 A 122 LEU LEU GLY VAL ALA GLN GLU ASN GLY VAL LYS ILE PRO SEQRES 4 A 122 PHE GLU CYS GLN ASP GLY ASN CYS GLY SER CYS LEU VAL SEQRES 5 A 122 LYS ILE THR HIS LEU ASP GLY GLU ARG ILE LYS GLY MET SEQRES 6 A 122 LEU LEU THR ASP LYS GLU ARG ASN VAL LEU LYS SER VAL SEQRES 7 A 122 GLY LYS LEU PRO LYS SER GLU GLU GLU ARG ALA ALA VAL SEQRES 8 A 122 ARG ASP LEU PRO PRO THR TYR ARG LEU ALA CYS GLN THR SEQRES 9 A 122 ILE VAL THR ASP GLU ASP LEU LEU VAL GLU PHE THR GLY SEQRES 10 A 122 GLU PRO GLY GLY ALA SEQRES 1 B 122 MET ALA THR ILE TYR PHE SER SER PRO LEU MET PRO HIS SEQRES 2 B 122 ASN LYS LYS VAL GLN ALA VAL ALA GLY LYS ARG SER THR SEQRES 3 B 122 LEU LEU GLY VAL ALA GLN GLU ASN GLY VAL LYS ILE PRO SEQRES 4 B 122 PHE GLU CYS GLN ASP GLY ASN CYS GLY SER CYS LEU VAL SEQRES 5 B 122 LYS ILE THR HIS LEU ASP GLY GLU ARG ILE LYS GLY MET SEQRES 6 B 122 LEU LEU THR ASP LYS GLU ARG ASN VAL LEU LYS SER VAL SEQRES 7 B 122 GLY LYS LEU PRO LYS SER GLU GLU GLU ARG ALA ALA VAL SEQRES 8 B 122 ARG ASP LEU PRO PRO THR TYR ARG LEU ALA CYS GLN THR SEQRES 9 B 122 ILE VAL THR ASP GLU ASP LEU LEU VAL GLU PHE THR GLY SEQRES 10 B 122 GLU PRO GLY GLY ALA SEQRES 1 C 122 MET ALA THR ILE TYR PHE SER SER PRO LEU MET PRO HIS SEQRES 2 C 122 ASN LYS LYS VAL GLN ALA VAL ALA GLY LYS ARG SER THR SEQRES 3 C 122 LEU LEU GLY VAL ALA GLN GLU ASN GLY VAL LYS ILE PRO SEQRES 4 C 122 PHE GLU CYS GLN ASP GLY ASN CYS GLY SER CYS LEU VAL SEQRES 5 C 122 LYS ILE THR HIS LEU ASP GLY GLU ARG ILE LYS GLY MET SEQRES 6 C 122 LEU LEU THR ASP LYS GLU ARG ASN VAL LEU LYS SER VAL SEQRES 7 C 122 GLY LYS LEU PRO LYS SER GLU GLU GLU ARG ALA ALA VAL SEQRES 8 C 122 ARG ASP LEU PRO PRO THR TYR ARG LEU ALA CYS GLN THR SEQRES 9 C 122 ILE VAL THR ASP GLU ASP LEU LEU VAL GLU PHE THR GLY SEQRES 10 C 122 GLU PRO GLY GLY ALA SEQRES 1 D 122 MET ALA THR ILE TYR PHE SER SER PRO LEU MET PRO HIS SEQRES 2 D 122 ASN LYS LYS VAL GLN ALA VAL ALA GLY LYS ARG SER THR SEQRES 3 D 122 LEU LEU GLY VAL ALA GLN GLU ASN GLY VAL LYS ILE PRO SEQRES 4 D 122 PHE GLU CYS GLN ASP GLY ASN CYS GLY SER CYS LEU VAL SEQRES 5 D 122 LYS ILE THR HIS LEU ASP GLY GLU ARG ILE LYS GLY MET SEQRES 6 D 122 LEU LEU THR ASP LYS GLU ARG ASN VAL LEU LYS SER VAL SEQRES 7 D 122 GLY LYS LEU PRO LYS SER GLU GLU GLU ARG ALA ALA VAL SEQRES 8 D 122 ARG ASP LEU PRO PRO THR TYR ARG LEU ALA CYS GLN THR SEQRES 9 D 122 ILE VAL THR ASP GLU ASP LEU LEU VAL GLU PHE THR GLY SEQRES 10 D 122 GLU PRO GLY GLY ALA SEQRES 1 E 122 MET ALA THR ILE TYR PHE SER SER PRO LEU MET PRO HIS SEQRES 2 E 122 ASN LYS LYS VAL GLN ALA VAL ALA GLY LYS ARG SER THR SEQRES 3 E 122 LEU LEU GLY VAL ALA GLN GLU ASN GLY VAL LYS ILE PRO SEQRES 4 E 122 PHE GLU CYS GLN ASP GLY ASN CYS GLY SER CYS LEU VAL SEQRES 5 E 122 LYS ILE THR HIS LEU ASP GLY GLU ARG ILE LYS GLY MET SEQRES 6 E 122 LEU LEU THR ASP LYS GLU ARG ASN VAL LEU LYS SER VAL SEQRES 7 E 122 GLY LYS LEU PRO LYS SER GLU GLU GLU ARG ALA ALA VAL SEQRES 8 E 122 ARG ASP LEU PRO PRO THR TYR ARG LEU ALA CYS GLN THR SEQRES 9 E 122 ILE VAL THR ASP GLU ASP LEU LEU VAL GLU PHE THR GLY SEQRES 10 E 122 GLU PRO GLY GLY ALA HET FES A1001 4 HET FES B1001 4 HET FES C1001 4 HET FES D1001 4 HET FES E1001 4 HETNAM FES FE2/S2 (INORGANIC) CLUSTER FORMUL 6 FES 5(FE2 S2) FORMUL 11 HOH *152(H2 O) HELIX 1 AA1 THR A 26 ASN A 34 1 9 HELIX 2 AA2 THR A 68 VAL A 78 1 11 HELIX 3 AA3 PRO A 82 ALA A 90 1 9 HELIX 4 AA4 THR B 26 ASN B 34 1 9 HELIX 5 AA5 THR B 68 VAL B 78 1 11 HELIX 6 AA6 PRO B 82 ALA B 90 1 9 HELIX 7 AA7 THR C 26 ASN C 34 1 9 HELIX 8 AA8 THR C 68 VAL C 78 1 11 HELIX 9 AA9 PRO C 82 ALA C 90 1 9 HELIX 10 AB1 VAL D 20 ARG D 24 5 5 HELIX 11 AB2 THR D 26 ASN D 34 1 9 HELIX 12 AB3 THR D 68 VAL D 78 1 11 HELIX 13 AB4 PRO D 82 ALA D 89 1 8 HELIX 14 AB5 THR E 26 ASN E 34 1 9 HELIX 15 AB6 THR E 68 VAL E 78 1 11 SHEET 1 AA1 5 LYS A 15 GLN A 18 0 SHEET 2 AA1 5 THR A 3 SER A 7 -1 N PHE A 6 O LYS A 15 SHEET 3 AA1 5 LEU A 111 GLU A 114 1 O VAL A 113 N TYR A 5 SHEET 4 AA1 5 LEU A 51 HIS A 56 -1 N LYS A 53 O GLU A 114 SHEET 5 AA1 5 THR A 97 LEU A 100 -1 O THR A 97 N ILE A 54 SHEET 1 AA2 5 LYS B 15 GLN B 18 0 SHEET 2 AA2 5 THR B 3 SER B 7 -1 N PHE B 6 O LYS B 15 SHEET 3 AA2 5 LEU B 111 GLU B 114 1 O VAL B 113 N TYR B 5 SHEET 4 AA2 5 LEU B 51 HIS B 56 -1 N LYS B 53 O GLU B 114 SHEET 5 AA2 5 THR B 97 LEU B 100 -1 O THR B 97 N ILE B 54 SHEET 1 AA3 5 LYS C 15 GLN C 18 0 SHEET 2 AA3 5 THR C 3 SER C 7 -1 N PHE C 6 O LYS C 15 SHEET 3 AA3 5 LEU C 111 GLU C 114 1 O VAL C 113 N TYR C 5 SHEET 4 AA3 5 LEU C 51 HIS C 56 -1 N LYS C 53 O GLU C 114 SHEET 5 AA3 5 THR C 97 LEU C 100 -1 O THR C 97 N ILE C 54 SHEET 1 AA4 5 LYS D 15 GLN D 18 0 SHEET 2 AA4 5 THR D 3 SER D 7 -1 N PHE D 6 O LYS D 15 SHEET 3 AA4 5 LEU D 111 GLU D 114 1 O VAL D 113 N TYR D 5 SHEET 4 AA4 5 LEU D 51 HIS D 56 -1 N LYS D 53 O GLU D 114 SHEET 5 AA4 5 THR D 97 LEU D 100 -1 O THR D 97 N ILE D 54 SHEET 1 AA5 5 LYS E 15 GLN E 18 0 SHEET 2 AA5 5 THR E 3 SER E 7 -1 N PHE E 6 O LYS E 15 SHEET 3 AA5 5 ASP E 110 PHE E 115 1 O VAL E 113 N TYR E 5 SHEET 4 AA5 5 LEU E 51 ASP E 58 -1 N LEU E 57 O ASP E 110 SHEET 5 AA5 5 THR E 97 LEU E 100 -1 O THR E 97 N ILE E 54 LINK SG CYS A 42 FE1 FES A1001 1555 1555 2.27 LINK SG CYS A 47 FE1 FES A1001 1555 1555 2.34 LINK SG CYS A 50 FE2 FES A1001 1555 1555 2.24 LINK SG CYS A 102 FE2 FES A1001 1555 1555 2.42 LINK SG CYS B 42 FE1 FES B1001 1555 1555 2.37 LINK SG CYS B 47 FE1 FES B1001 1555 1555 2.39 LINK SG CYS B 50 FE2 FES B1001 1555 1555 2.24 LINK SG CYS B 102 FE2 FES B1001 1555 1555 2.41 LINK SG CYS C 42 FE1 FES C1001 1555 1555 2.32 LINK SG CYS C 47 FE1 FES C1001 1555 1555 2.39 LINK SG CYS C 50 FE2 FES C1001 1555 1555 2.30 LINK SG CYS C 102 FE2 FES C1001 1555 1555 2.42 LINK SG CYS D 42 FE1 FES D1001 1555 1555 2.33 LINK SG CYS D 47 FE1 FES D1001 1555 1555 2.36 LINK SG CYS D 50 FE2 FES D1001 1555 1555 2.29 LINK SG CYS D 102 FE2 FES D1001 1555 1555 2.36 LINK SG CYS E 42 FE1 FES E1001 1555 1555 2.29 LINK SG CYS E 47 FE1 FES E1001 1555 1555 2.40 LINK SG CYS E 50 FE2 FES E1001 1555 1555 2.26 LINK SG CYS E 102 FE2 FES E1001 1555 1555 2.35 SITE 1 AC1 8 GLU A 41 CYS A 42 GLY A 45 CYS A 47 SITE 2 AC1 8 GLY A 48 SER A 49 CYS A 50 CYS A 102 SITE 1 AC2 8 GLU B 41 CYS B 42 GLY B 45 CYS B 47 SITE 2 AC2 8 GLY B 48 SER B 49 CYS B 50 CYS B 102 SITE 1 AC3 6 CYS C 42 GLY C 45 CYS C 47 GLY C 48 SITE 2 AC3 6 CYS C 50 CYS C 102 SITE 1 AC4 6 CYS D 42 GLY D 45 CYS D 47 GLY D 48 SITE 2 AC4 6 CYS D 50 CYS D 102 SITE 1 AC5 7 CYS E 42 GLY E 45 ASN E 46 CYS E 47 SITE 2 AC5 7 GLY E 48 CYS E 50 CYS E 102 CRYST1 133.271 134.480 36.769 90.00 90.00 90.00 P 21 21 2 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007504 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007436 0.000000 0.00000 SCALE3 0.000000 0.000000 0.027197 0.00000