HEADER TRANSFERASE 02-OCT-15 5FIU TITLE BINDING AND STRUCTURAL STUDIES OF A 5,5-DIFLUOROMETHYL ADENOSINE TITLE 2 NUCLEOSIDE WITH THE FLUORINASE ENZYME COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-FLUORO-5'-DEOXY-ADENOSINE SYNTHASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: 5-FDAS, 5-FLUORODEOXYADENOSINE SYNTHASE, FLUORINASE; COMPND 5 EC: 2.5.1.63; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES CATTLEYA; SOURCE 3 ORGANISM_TAXID: 29303; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET KEYWDS TRANSFERASE, FLUORINASE, DIFLUOROMETHYL, ISOTHERMAL TITRATION KEYWDS 2 CALORIMETRY EXPDTA X-RAY DIFFRACTION AUTHOR S.THOMPSON,S.A.MCMAHON,J.H.NAISMITH,D.O'HAGAN REVDAT 2 10-JAN-24 5FIU 1 REMARK REVDAT 1 23-DEC-15 5FIU 0 JRNL AUTH S.THOMPSON,S.A.MCMAHON,J.H.NAISMITH,D.O'HAGAN JRNL TITL EXPLORATION OF A POTENTIAL DIFLUOROMETHYL-NUCLEOSIDE JRNL TITL 2 SUBSTRATE WITH THE FLUORINASE ENZYME. JRNL REF BIOORG.CHEM. V. 64 37 2015 JRNL REFN ISSN 0045-2068 JRNL PMID 26642178 JRNL DOI 10.1016/J.BIOORG.2015.11.003 REMARK 2 REMARK 2 RESOLUTION. 1.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0124 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 74202 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3933 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.84 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.89 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5428 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE SET COUNT : 271 REMARK 3 BIN FREE R VALUE : 0.2880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6659 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 90 REMARK 3 SOLVENT ATOMS : 326 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.131 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.116 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.082 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.802 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6940 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6413 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9484 ; 1.505 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14768 ; 1.262 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 880 ; 6.914 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 297 ;32.855 ;23.131 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1018 ;11.435 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 51 ;14.089 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1065 ; 0.188 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7900 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1568 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3498 ; 1.397 ; 2.528 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3497 ; 1.395 ; 2.528 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4369 ; 2.185 ; 3.782 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3440 ; 1.928 ; 2.772 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 5FIU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1290065200. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93927 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 77902 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.840 REMARK 200 RESOLUTION RANGE LOW (A) : 65.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.70000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1RQP REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% PEG-MME (2K), 0.1 M SODIUM CITRATE REMARK 280 PH 4.5 AND 0.12 M AMMONIUM TARTRATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.16500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 91.16500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 38.13000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 64.58000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 38.13000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 64.58000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 91.16500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 38.13000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 64.58000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 91.16500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 38.13000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 64.58000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 28430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 57720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -99.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 76.26000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -91.16500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ASN A 4 REMARK 465 SER A 5 REMARK 465 THR A 6 REMARK 465 ARG A 7 REMARK 465 ARG A 299 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ALA B 3 REMARK 465 ASN B 4 REMARK 465 SER B 5 REMARK 465 THR B 6 REMARK 465 ARG B 7 REMARK 465 ARG B 299 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 ALA C 3 REMARK 465 ASN C 4 REMARK 465 SER C 5 REMARK 465 THR C 6 REMARK 465 ARG C 7 REMARK 465 ARG C 299 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 244 O REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 8 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 277 CG - CD - NE ANGL. DEV. = 12.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 43 -70.14 -82.76 REMARK 500 LYS A 92 -78.38 -91.91 REMARK 500 ALA A 95 129.63 78.18 REMARK 500 VAL A 162 -62.63 -133.46 REMARK 500 LYS B 92 -78.53 -92.42 REMARK 500 ALA B 95 129.92 77.84 REMARK 500 VAL B 162 -62.74 -132.44 REMARK 500 VAL C 43 -71.10 -81.34 REMARK 500 LYS C 92 -78.74 -92.30 REMARK 500 ALA C 95 129.15 78.18 REMARK 500 VAL C 162 -63.60 -132.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AB" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 THE SHEETS PRESENTED AS "BB" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 THE SHEETS PRESENTED AS "CB" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE Y3J A 1299 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE Y3J B 1299 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE Y3J C 1299 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TLA A 1300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TLA C 1300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TLA B 1300 DBREF 5FIU A 1 299 UNP Q70GK9 FLA_STRCT 1 299 DBREF 5FIU B 1 299 UNP Q70GK9 FLA_STRCT 1 299 DBREF 5FIU C 1 299 UNP Q70GK9 FLA_STRCT 1 299 SEQRES 1 A 299 MET ALA ALA ASN SER THR ARG ARG PRO ILE ILE ALA PHE SEQRES 2 A 299 MET SER ASP LEU GLY THR THR ASP ASP SER VAL ALA GLN SEQRES 3 A 299 CYS LYS GLY LEU MET TYR SER ILE CYS PRO ASP VAL THR SEQRES 4 A 299 VAL VAL ASP VAL CYS HIS SER MET THR PRO TRP ASP VAL SEQRES 5 A 299 GLU GLU GLY ALA ARG TYR ILE VAL ASP LEU PRO ARG PHE SEQRES 6 A 299 PHE PRO GLU GLY THR VAL PHE ALA THR THR THR TYR PRO SEQRES 7 A 299 ALA THR GLY THR THR THR ARG SER VAL ALA VAL ARG ILE SEQRES 8 A 299 LYS GLN ALA ALA LYS GLY GLY ALA ARG GLY GLN TRP ALA SEQRES 9 A 299 GLY SER GLY ALA GLY PHE GLU ARG ALA GLU GLY SER TYR SEQRES 10 A 299 ILE TYR ILE ALA PRO ASN ASN GLY LEU LEU THR THR VAL SEQRES 11 A 299 LEU GLU GLU HIS GLY TYR LEU GLU ALA TYR GLU VAL THR SEQRES 12 A 299 SER PRO LYS VAL ILE PRO GLU GLN PRO GLU PRO THR PHE SEQRES 13 A 299 TYR SER ARG GLU MET VAL ALA ILE PRO SER ALA HIS LEU SEQRES 14 A 299 ALA ALA GLY PHE PRO LEU SER GLU VAL GLY ARG PRO LEU SEQRES 15 A 299 GLU ASP HIS GLU ILE VAL ARG PHE ASN ARG PRO ALA VAL SEQRES 16 A 299 GLU GLN ASP GLY GLU ALA LEU VAL GLY VAL VAL SER ALA SEQRES 17 A 299 ILE ASP HIS PRO PHE GLY ASN VAL TRP THR ASN ILE HIS SEQRES 18 A 299 ARG THR ASP LEU GLU LYS ALA GLY ILE GLY TYR GLY ALA SEQRES 19 A 299 ARG LEU ARG LEU THR LEU ASP GLY VAL LEU PRO PHE GLU SEQRES 20 A 299 ALA PRO LEU THR PRO THR PHE ALA ASP ALA GLY GLU ILE SEQRES 21 A 299 GLY ASN ILE ALA ILE TYR LEU ASN SER ARG GLY TYR LEU SEQRES 22 A 299 SER ILE ALA ARG ASN ALA ALA SER LEU ALA TYR PRO TYR SEQRES 23 A 299 HIS LEU LYS GLU GLY MET SER ALA ARG VAL GLU ALA ARG SEQRES 1 B 299 MET ALA ALA ASN SER THR ARG ARG PRO ILE ILE ALA PHE SEQRES 2 B 299 MET SER ASP LEU GLY THR THR ASP ASP SER VAL ALA GLN SEQRES 3 B 299 CYS LYS GLY LEU MET TYR SER ILE CYS PRO ASP VAL THR SEQRES 4 B 299 VAL VAL ASP VAL CYS HIS SER MET THR PRO TRP ASP VAL SEQRES 5 B 299 GLU GLU GLY ALA ARG TYR ILE VAL ASP LEU PRO ARG PHE SEQRES 6 B 299 PHE PRO GLU GLY THR VAL PHE ALA THR THR THR TYR PRO SEQRES 7 B 299 ALA THR GLY THR THR THR ARG SER VAL ALA VAL ARG ILE SEQRES 8 B 299 LYS GLN ALA ALA LYS GLY GLY ALA ARG GLY GLN TRP ALA SEQRES 9 B 299 GLY SER GLY ALA GLY PHE GLU ARG ALA GLU GLY SER TYR SEQRES 10 B 299 ILE TYR ILE ALA PRO ASN ASN GLY LEU LEU THR THR VAL SEQRES 11 B 299 LEU GLU GLU HIS GLY TYR LEU GLU ALA TYR GLU VAL THR SEQRES 12 B 299 SER PRO LYS VAL ILE PRO GLU GLN PRO GLU PRO THR PHE SEQRES 13 B 299 TYR SER ARG GLU MET VAL ALA ILE PRO SER ALA HIS LEU SEQRES 14 B 299 ALA ALA GLY PHE PRO LEU SER GLU VAL GLY ARG PRO LEU SEQRES 15 B 299 GLU ASP HIS GLU ILE VAL ARG PHE ASN ARG PRO ALA VAL SEQRES 16 B 299 GLU GLN ASP GLY GLU ALA LEU VAL GLY VAL VAL SER ALA SEQRES 17 B 299 ILE ASP HIS PRO PHE GLY ASN VAL TRP THR ASN ILE HIS SEQRES 18 B 299 ARG THR ASP LEU GLU LYS ALA GLY ILE GLY TYR GLY ALA SEQRES 19 B 299 ARG LEU ARG LEU THR LEU ASP GLY VAL LEU PRO PHE GLU SEQRES 20 B 299 ALA PRO LEU THR PRO THR PHE ALA ASP ALA GLY GLU ILE SEQRES 21 B 299 GLY ASN ILE ALA ILE TYR LEU ASN SER ARG GLY TYR LEU SEQRES 22 B 299 SER ILE ALA ARG ASN ALA ALA SER LEU ALA TYR PRO TYR SEQRES 23 B 299 HIS LEU LYS GLU GLY MET SER ALA ARG VAL GLU ALA ARG SEQRES 1 C 299 MET ALA ALA ASN SER THR ARG ARG PRO ILE ILE ALA PHE SEQRES 2 C 299 MET SER ASP LEU GLY THR THR ASP ASP SER VAL ALA GLN SEQRES 3 C 299 CYS LYS GLY LEU MET TYR SER ILE CYS PRO ASP VAL THR SEQRES 4 C 299 VAL VAL ASP VAL CYS HIS SER MET THR PRO TRP ASP VAL SEQRES 5 C 299 GLU GLU GLY ALA ARG TYR ILE VAL ASP LEU PRO ARG PHE SEQRES 6 C 299 PHE PRO GLU GLY THR VAL PHE ALA THR THR THR TYR PRO SEQRES 7 C 299 ALA THR GLY THR THR THR ARG SER VAL ALA VAL ARG ILE SEQRES 8 C 299 LYS GLN ALA ALA LYS GLY GLY ALA ARG GLY GLN TRP ALA SEQRES 9 C 299 GLY SER GLY ALA GLY PHE GLU ARG ALA GLU GLY SER TYR SEQRES 10 C 299 ILE TYR ILE ALA PRO ASN ASN GLY LEU LEU THR THR VAL SEQRES 11 C 299 LEU GLU GLU HIS GLY TYR LEU GLU ALA TYR GLU VAL THR SEQRES 12 C 299 SER PRO LYS VAL ILE PRO GLU GLN PRO GLU PRO THR PHE SEQRES 13 C 299 TYR SER ARG GLU MET VAL ALA ILE PRO SER ALA HIS LEU SEQRES 14 C 299 ALA ALA GLY PHE PRO LEU SER GLU VAL GLY ARG PRO LEU SEQRES 15 C 299 GLU ASP HIS GLU ILE VAL ARG PHE ASN ARG PRO ALA VAL SEQRES 16 C 299 GLU GLN ASP GLY GLU ALA LEU VAL GLY VAL VAL SER ALA SEQRES 17 C 299 ILE ASP HIS PRO PHE GLY ASN VAL TRP THR ASN ILE HIS SEQRES 18 C 299 ARG THR ASP LEU GLU LYS ALA GLY ILE GLY TYR GLY ALA SEQRES 19 C 299 ARG LEU ARG LEU THR LEU ASP GLY VAL LEU PRO PHE GLU SEQRES 20 C 299 ALA PRO LEU THR PRO THR PHE ALA ASP ALA GLY GLU ILE SEQRES 21 C 299 GLY ASN ILE ALA ILE TYR LEU ASN SER ARG GLY TYR LEU SEQRES 22 C 299 SER ILE ALA ARG ASN ALA ALA SER LEU ALA TYR PRO TYR SEQRES 23 C 299 HIS LEU LYS GLU GLY MET SER ALA ARG VAL GLU ALA ARG HET Y3J A1299 20 HET TLA A1300 10 HET Y3J B1299 20 HET TLA B1300 10 HET Y3J C1299 20 HET TLA C1300 10 HETNAM Y3J 5,5-DIFLUOROMETHYL ADENOSINE HETNAM TLA L(+)-TARTARIC ACID FORMUL 4 Y3J 3(C10 H11 F2 N5 O3) FORMUL 5 TLA 3(C4 H6 O6) FORMUL 10 HOH *326(H2 O) HELIX 1 1 ASP A 22 CYS A 35 1 14 HELIX 2 2 ASP A 51 VAL A 60 1 10 HELIX 3 3 LEU A 62 PHE A 66 5 5 HELIX 4 4 LEU A 127 GLY A 135 1 9 HELIX 5 5 PHE A 156 MET A 161 1 6 HELIX 6 6 VAL A 162 ALA A 171 1 10 HELIX 7 7 PRO A 174 VAL A 178 5 5 HELIX 8 8 GLU A 183 ILE A 187 5 5 HELIX 9 9 ARG A 222 ALA A 228 1 7 HELIX 10 10 THR A 253 GLY A 258 5 6 HELIX 11 11 LEU A 282 HIS A 287 1 6 HELIX 12 12 ASP B 22 CYS B 35 1 14 HELIX 13 13 ASP B 51 VAL B 60 1 10 HELIX 14 14 LEU B 62 PHE B 66 5 5 HELIX 15 15 LEU B 127 GLY B 135 1 9 HELIX 16 16 PHE B 156 MET B 161 1 6 HELIX 17 17 VAL B 162 ALA B 171 1 10 HELIX 18 18 PRO B 174 VAL B 178 5 5 HELIX 19 19 GLU B 183 ILE B 187 5 5 HELIX 20 20 ARG B 222 ALA B 228 1 7 HELIX 21 21 PHE B 254 GLY B 258 5 5 HELIX 22 22 LEU B 282 HIS B 287 1 6 HELIX 23 23 ASP C 22 CYS C 35 1 14 HELIX 24 24 ASP C 51 VAL C 60 1 10 HELIX 25 25 LEU C 62 PHE C 66 5 5 HELIX 26 26 LEU C 127 GLY C 135 1 9 HELIX 27 27 PHE C 156 MET C 161 1 6 HELIX 28 28 VAL C 162 ALA C 171 1 10 HELIX 29 29 PRO C 174 VAL C 178 5 5 HELIX 30 30 GLU C 183 ILE C 187 5 5 HELIX 31 31 ARG C 222 ALA C 228 1 7 HELIX 32 32 THR C 253 GLY C 258 5 6 SHEET 1 AA 6 THR A 39 CYS A 44 0 SHEET 2 AA 6 ILE A 10 SER A 15 1 O ILE A 11 N VAL A 41 SHEET 3 AA 6 VAL A 71 THR A 75 1 O VAL A 71 N ALA A 12 SHEET 4 AA 6 ILE A 118 ALA A 121 1 O ILE A 118 N PHE A 72 SHEET 5 AA 6 VAL A 87 ILE A 91 -1 O VAL A 87 N ALA A 121 SHEET 6 AA 6 TYR A 136 GLU A 141 -1 N LEU A 137 O ARG A 90 SHEET 1 AB 9 GLU A 196 ASP A 198 0 SHEET 2 AB 9 ALA A 201 ASP A 210 -1 O ALA A 201 N ASP A 198 SHEET 3 AB 9 ASN A 215 HIS A 221 -1 O ASN A 215 N ASP A 210 SHEET 4 AB 9 TYR A 272 ARG A 277 -1 O LEU A 273 N THR A 218 SHEET 5 AB 9 ILE A 263 LEU A 267 -1 O ALA A 264 N ALA A 276 SHEET 6 AB 9 PHE A 246 THR A 251 1 O PRO A 249 N ILE A 265 SHEET 7 AB 9 ARG A 235 LEU A 240 -1 O LEU A 236 N ALA A 248 SHEET 8 AB 9 SER A 293 GLU A 297 -1 O ARG A 295 N THR A 239 SHEET 9 AB 9 GLU A 196 ASP A 198 0 SHEET 1 BA 6 THR B 39 CYS B 44 0 SHEET 2 BA 6 ILE B 10 SER B 15 1 O ILE B 11 N VAL B 41 SHEET 3 BA 6 VAL B 71 THR B 75 1 O VAL B 71 N ALA B 12 SHEET 4 BA 6 ILE B 118 ALA B 121 1 O ILE B 118 N PHE B 72 SHEET 5 BA 6 VAL B 87 ILE B 91 -1 O VAL B 87 N ALA B 121 SHEET 6 BA 6 TYR B 136 GLU B 141 -1 N LEU B 137 O ARG B 90 SHEET 1 BB 9 GLU B 196 ASP B 198 0 SHEET 2 BB 9 ALA B 201 ASP B 210 -1 O ALA B 201 N ASP B 198 SHEET 3 BB 9 ASN B 215 HIS B 221 -1 O ASN B 215 N ASP B 210 SHEET 4 BB 9 TYR B 272 ARG B 277 -1 O LEU B 273 N THR B 218 SHEET 5 BB 9 ILE B 263 LEU B 267 -1 O ALA B 264 N ALA B 276 SHEET 6 BB 9 LEU B 244 THR B 251 1 O PRO B 249 N ILE B 265 SHEET 7 BB 9 ARG B 235 LEU B 240 -1 O LEU B 236 N ALA B 248 SHEET 8 BB 9 SER B 293 GLU B 297 -1 O ARG B 295 N THR B 239 SHEET 9 BB 9 GLU B 196 ASP B 198 0 SHEET 1 CA 6 THR C 39 CYS C 44 0 SHEET 2 CA 6 ILE C 10 SER C 15 1 O ILE C 11 N VAL C 41 SHEET 3 CA 6 VAL C 71 THR C 75 1 O VAL C 71 N ALA C 12 SHEET 4 CA 6 ILE C 118 ALA C 121 1 O ILE C 118 N PHE C 72 SHEET 5 CA 6 VAL C 87 ILE C 91 -1 O VAL C 87 N ALA C 121 SHEET 6 CA 6 TYR C 136 GLU C 141 -1 N LEU C 137 O ARG C 90 SHEET 1 CB 9 GLU C 196 ASP C 198 0 SHEET 2 CB 9 ALA C 201 ASP C 210 -1 O ALA C 201 N ASP C 198 SHEET 3 CB 9 ASN C 215 HIS C 221 -1 O ASN C 215 N ASP C 210 SHEET 4 CB 9 TYR C 272 ARG C 277 -1 O LEU C 273 N THR C 218 SHEET 5 CB 9 ILE C 263 LEU C 267 -1 O ALA C 264 N ALA C 276 SHEET 6 CB 9 LEU C 244 THR C 251 1 O PRO C 249 N ILE C 265 SHEET 7 CB 9 ARG C 235 LEU C 240 -1 O LEU C 236 N ALA C 248 SHEET 8 CB 9 SER C 293 GLU C 297 -1 O ARG C 295 N THR C 239 SHEET 9 CB 9 GLU C 196 ASP C 198 0 CISPEP 1 HIS A 211 PRO A 212 0 4.74 CISPEP 2 HIS B 211 PRO B 212 0 6.15 CISPEP 3 HIS C 211 PRO C 212 0 6.93 SITE 1 AC1 16 ASP A 16 TRP A 50 THR A 76 TYR A 77 SITE 2 AC1 16 PRO A 78 THR A 80 THR A 155 PHE A 156 SITE 3 AC1 16 TYR A 157 SER A 158 PHE C 213 ASN C 215 SITE 4 AC1 16 PHE C 254 ARG C 277 ALA C 279 TLA C1300 SITE 1 AC2 16 PHE A 213 ASN A 215 PHE A 254 ARG A 277 SITE 2 AC2 16 ALA A 279 TLA A1300 ASP B 16 TRP B 50 SITE 3 AC2 16 THR B 76 TYR B 77 PRO B 78 THR B 80 SITE 4 AC2 16 THR B 155 PHE B 156 TYR B 157 SER B 158 SITE 1 AC3 15 PHE B 213 ASN B 215 PHE B 254 ARG B 277 SITE 2 AC3 15 ALA B 279 TLA B1300 ASP C 16 TRP C 50 SITE 3 AC3 15 TYR C 77 PRO C 78 THR C 80 THR C 155 SITE 4 AC3 15 PHE C 156 TYR C 157 SER C 158 SITE 1 AC4 13 ASP A 210 PHE A 213 ASN A 215 TRP A 217 SITE 2 AC4 13 SER A 269 ARG A 270 HOH A2109 HOH A2110 SITE 3 AC4 13 HOH A2125 LEU B 17 SER B 23 THR B 155 SITE 4 AC4 13 Y3J B1299 SITE 1 AC5 12 LEU A 17 SER A 23 THR A 155 Y3J A1299 SITE 2 AC5 12 HOH A2014 HOH A2093 ASP C 210 PHE C 213 SITE 3 AC5 12 ASN C 215 SER C 269 ARG C 270 HOH C2055 SITE 1 AC6 12 ASP B 210 PHE B 213 ASN B 215 SER B 269 SITE 2 AC6 12 ARG B 270 HOH B2085 HOH B2086 HOH B2106 SITE 3 AC6 12 LEU C 17 SER C 23 THR C 155 Y3J C1299 CRYST1 76.260 129.160 182.330 90.00 90.00 90.00 C 2 2 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013113 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007742 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005485 0.00000