HEADER TRANSCRIPTION 17-OCT-15 5FKL TITLE TETR(D) H100A MUTANT IN COMPLEX WITH ANHYDROTETRACYCLINE AND MAGNESIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: TETRACYCLINE REPRESSOR, CLASS D; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: K-12 KEYWDS TRANSCRIPTION, REPRESSOR, ANTIBIOTIC RESISTANCE, TETR EXPDTA X-RAY DIFFRACTION AUTHOR S.WERTEN,J.SCHNEIDER,G.J.PALM,W.HINRICHS REVDAT 6 10-JAN-24 5FKL 1 REMARK LINK REVDAT 5 17-JUL-19 5FKL 1 REMARK REVDAT 4 08-MAY-19 5FKL 1 REMARK REVDAT 3 15-JUN-16 5FKL 1 JRNL REVDAT 2 13-APR-16 5FKL 1 JRNL REVDAT 1 06-APR-16 5FKL 0 JRNL AUTH S.WERTEN,J.SCHNEIDER,G.J.PALM,W.HINRICHS JRNL TITL MODULAR ORGANISATION OF INDUCER RECOGNITION AND ALLOSTERY IN JRNL TITL 2 THE TETRACYCLINE REPRESSOR JRNL REF FEBS J. V. 283 2102 2016 JRNL REFN ISSN 1742-464X JRNL PMID 27028290 JRNL DOI 10.1111/FEBS.13723 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 62.02 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 15187 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 808 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.91 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1072 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.14 REMARK 3 BIN R VALUE (WORKING SET) : 0.3260 REMARK 3 BIN FREE R VALUE SET COUNT : 52 REMARK 3 BIN FREE R VALUE : 0.3590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1611 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 64 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.78000 REMARK 3 B22 (A**2) : 2.78000 REMARK 3 B33 (A**2) : -5.55000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.191 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.174 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.151 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.051 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1684 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1621 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2289 ; 1.150 ; 1.998 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3702 ; 0.714 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 203 ; 4.808 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 83 ;35.422 ;23.494 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 291 ;14.197 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;17.052 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 259 ; 0.061 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1911 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 398 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 812 ; 1.664 ; 3.420 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 811 ; 1.665 ; 3.420 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1012 ; 2.650 ; 5.107 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 872 ; 1.870 ; 3.693 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 64 REMARK 3 ORIGIN FOR THE GROUP (A): 18.9497 28.0098 13.2113 REMARK 3 T TENSOR REMARK 3 T11: 0.0580 T22: 0.2777 REMARK 3 T33: 0.1327 T12: -0.0702 REMARK 3 T13: -0.0405 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 1.5427 L22: 0.0493 REMARK 3 L33: 3.1299 L12: -0.0831 REMARK 3 L13: 2.1664 L23: -0.0685 REMARK 3 S TENSOR REMARK 3 S11: 0.0723 S12: 0.2471 S13: 0.0913 REMARK 3 S21: 0.0335 S22: -0.1288 S23: 0.0021 REMARK 3 S31: 0.1873 S32: 0.2409 S33: 0.0564 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 65 A 106 REMARK 3 ORIGIN FOR THE GROUP (A): 22.3448 27.2236 35.3722 REMARK 3 T TENSOR REMARK 3 T11: 0.1061 T22: 0.0444 REMARK 3 T33: 0.1756 T12: -0.0373 REMARK 3 T13: -0.0002 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 1.1988 L22: 0.0977 REMARK 3 L33: 1.4066 L12: -0.2571 REMARK 3 L13: 0.3757 L23: 0.1465 REMARK 3 S TENSOR REMARK 3 S11: 0.0569 S12: 0.0967 S13: 0.0019 REMARK 3 S21: 0.0417 S22: -0.0285 S23: 0.0154 REMARK 3 S31: 0.3091 S32: 0.0068 S33: -0.0283 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 107 A 159 REMARK 3 ORIGIN FOR THE GROUP (A): 24.7296 33.0574 35.4954 REMARK 3 T TENSOR REMARK 3 T11: 0.0725 T22: 0.0414 REMARK 3 T33: 0.2265 T12: 0.0201 REMARK 3 T13: 0.0072 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 1.1636 L22: 0.0366 REMARK 3 L33: 0.9929 L12: -0.1942 REMARK 3 L13: -0.3099 L23: 0.0001 REMARK 3 S TENSOR REMARK 3 S11: 0.0607 S12: 0.0910 S13: -0.1088 REMARK 3 S21: -0.0122 S22: -0.0182 S23: 0.0359 REMARK 3 S31: -0.0590 S32: -0.0429 S33: -0.0425 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 164 A 208 REMARK 3 ORIGIN FOR THE GROUP (A): 38.3705 27.8541 44.0855 REMARK 3 T TENSOR REMARK 3 T11: 0.1831 T22: 0.0222 REMARK 3 T33: 0.1920 T12: 0.0208 REMARK 3 T13: 0.0109 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.4969 L22: 0.3702 REMARK 3 L33: 0.1840 L12: 0.2780 REMARK 3 L13: 0.0200 L23: 0.0112 REMARK 3 S TENSOR REMARK 3 S11: 0.0171 S12: -0.0558 S13: -0.0943 REMARK 3 S21: 0.1041 S22: -0.0586 S23: 0.0631 REMARK 3 S31: 0.1312 S32: 0.0454 S33: 0.0415 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 222 A 223 REMARK 3 ORIGIN FOR THE GROUP (A): 19.7916 34.6966 35.0919 REMARK 3 T TENSOR REMARK 3 T11: 0.0985 T22: 0.0309 REMARK 3 T33: 0.1639 T12: -0.0139 REMARK 3 T13: -0.0197 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 6.0999 L22: 4.8880 REMARK 3 L33: 6.6685 L12: -4.0978 REMARK 3 L13: -1.6916 L23: -2.5002 REMARK 3 S TENSOR REMARK 3 S11: -0.0547 S12: 0.0293 S13: 0.1272 REMARK 3 S21: 0.1409 S22: -0.0091 S23: -0.1625 REMARK 3 S31: -0.1670 S32: -0.0301 S33: 0.0638 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 5FKL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-OCT-15. REMARK 100 THE DEPOSITION ID IS D_1290065322. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8031 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX SX-165MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15800 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 62.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.67000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4D7M REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4 M (NH4)2SO4, 0.7 M LI2SO4, 0.1 M REMARK 280 SODIUM CITRATE, 1 MM 5A,6-ANHYDROTETRACYCLINE, 7.5 MM MGCL2 AT REMARK 280 295 K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.27850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 33.27850 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.84050 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 33.27850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.92025 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 33.27850 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 134.76075 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 33.27850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 134.76075 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 33.27850 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 44.92025 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 33.27850 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 33.27850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 89.84050 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 33.27850 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 33.27850 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 89.84050 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 33.27850 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 134.76075 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 33.27850 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 44.92025 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 33.27850 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 44.92025 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 33.27850 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 134.76075 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 33.27850 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 33.27850 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 89.84050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -94.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 66.55700 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 66.55700 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2010 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2050 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 160 REMARK 465 ALA A 161 REMARK 465 PRO A 162 REMARK 465 ASP A 163 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 66 63.47 -115.19 REMARK 500 LEU A 204 -120.15 52.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 223 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TDC A 222 O12 REMARK 620 2 TDC A 222 O11 67.4 REMARK 620 3 HOH A2032 O 96.2 160.6 REMARK 620 4 HOH A2033 O 154.9 87.5 108.7 REMARK 620 5 HOH A2064 O 84.0 88.4 100.6 94.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TDC A 222 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 223 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FKK RELATED DB: PDB REMARK 900 TETR(D) N82A MUTANT IN COMPLEX WITH ANHYDROTETRACYCLINE AND REMARK 900 MAGNESIUM REMARK 900 RELATED ID: 5FKM RELATED DB: PDB REMARK 900 TETR(D) T103A MUTANT IN COMPLEX WITH ANHYDROTETRACYCLINE AND REMARK 900 MAGNESIUM, I4(1)22 REMARK 900 RELATED ID: 5FKN RELATED DB: PDB REMARK 900 TETR(D) T103A MUTANT IN COMPLEX WITH ANHYDROTETRACYCLINE AND REMARK 900 MAGNESIUM, P4(3)2(1)2 REMARK 900 RELATED ID: 5FKO RELATED DB: PDB REMARK 900 TETR(D) E147A MUTANT IN COMPLEX WITH ANHYDROTETRACYCLINE AND REMARK 900 MAGNESIUM DBREF 5FKL A 3 208 UNP C6G9U5 C6G9U5_ECOLX 3 208 SEQADV 5FKL SER A 2 UNP C6G9U5 EXPRESSION TAG SEQADV 5FKL ALA A 100 UNP C6G9U5 HIS 100 ENGINEERED MUTATION SEQRES 1 A 207 SER ARG LEU ASN ARG GLU SER VAL ILE ASP ALA ALA LEU SEQRES 2 A 207 GLU LEU LEU ASN GLU THR GLY ILE ASP GLY LEU THR THR SEQRES 3 A 207 ARG LYS LEU ALA GLN LYS LEU GLY ILE GLU GLN PRO THR SEQRES 4 A 207 LEU TYR TRP HIS VAL LYS ASN LYS ARG ALA LEU LEU ASP SEQRES 5 A 207 ALA LEU ALA VAL GLU ILE LEU ALA ARG HIS HIS ASP TYR SEQRES 6 A 207 SER LEU PRO ALA ALA GLY GLU SER TRP GLN SER PHE LEU SEQRES 7 A 207 ARG ASN ASN ALA MET SER PHE ARG ARG ALA LEU LEU ARG SEQRES 8 A 207 TYR ARG ASP GLY ALA LYS VAL ALA LEU GLY THR ARG PRO SEQRES 9 A 207 ASP GLU LYS GLN TYR ASP THR VAL GLU THR GLN LEU ARG SEQRES 10 A 207 PHE MET THR GLU ASN GLY PHE SER LEU ARG ASP GLY LEU SEQRES 11 A 207 TYR ALA ILE SER ALA VAL SER HIS PHE THR LEU GLY ALA SEQRES 12 A 207 VAL LEU GLU GLN GLN GLU HIS THR ALA ALA LEU THR ASP SEQRES 13 A 207 ARG PRO ALA ALA PRO ASP GLU ASN LEU PRO PRO LEU LEU SEQRES 14 A 207 ARG GLU ALA LEU GLN ILE MET ASP SER ASP ASP GLY GLU SEQRES 15 A 207 GLN ALA PHE LEU HIS GLY LEU GLU SER LEU ILE ARG GLY SEQRES 16 A 207 PHE GLU VAL GLN LEU THR ALA LEU LEU GLN ILE VAL HET TDC A 222 31 HET MG A 223 1 HET SO4 A 301 5 HET CL A 302 1 HET CL A 303 1 HET CL A 304 1 HETNAM TDC 5A,6-ANHYDROTETRACYCLINE HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 2 TDC C22 H22 N2 O7 FORMUL 3 MG MG 2+ FORMUL 4 SO4 O4 S 2- FORMUL 5 CL 3(CL 1-) FORMUL 8 HOH *64(H2 O) HELIX 1 1 ASN A 5 GLY A 21 1 17 HELIX 2 2 THR A 26 GLY A 35 1 10 HELIX 3 3 GLU A 37 VAL A 45 1 9 HELIX 4 4 ASN A 47 HIS A 64 1 18 HELIX 5 5 SER A 74 TYR A 93 1 20 HELIX 6 6 ASP A 95 LEU A 101 1 7 HELIX 7 7 ASP A 106 LYS A 108 5 3 HELIX 8 8 GLN A 109 ASN A 123 1 15 HELIX 9 9 SER A 126 THR A 156 1 31 HELIX 10 10 PRO A 167 SER A 179 1 13 HELIX 11 11 GLY A 182 LEU A 204 1 23 LINK O12 TDC A 222 MG MG A 223 1555 1555 2.27 LINK O11 TDC A 222 MG MG A 223 1555 1555 2.37 LINK MG MG A 223 O HOH A2032 1555 1555 2.16 LINK MG MG A 223 O HOH A2033 1555 1555 1.92 LINK MG MG A 223 O HOH A2064 1555 1555 2.12 SITE 1 AC1 16 HIS A 64 SER A 67 ASN A 82 PHE A 86 SITE 2 AC1 16 THR A 103 ARG A 104 PRO A 105 VAL A 113 SITE 3 AC1 16 GLN A 116 SER A 138 LEU A 174 MET A 177 SITE 4 AC1 16 MG A 223 HOH A2033 HOH A2045 HOH A2064 SITE 1 AC2 5 GLU A 147 TDC A 222 HOH A2032 HOH A2033 SITE 2 AC2 5 HOH A2064 SITE 1 AC3 4 ARG A 62 HIS A 63 ARG A 92 TYR A 93 SITE 1 AC4 5 SER A 2 ARG A 3 SER A 74 SER A 77 SITE 2 AC4 5 HOH A2021 SITE 1 AC5 4 LEU A 4 GLN A 76 ARG A 80 HOH A2056 SITE 1 AC6 2 ARG A 6 GLU A 7 CRYST1 66.557 66.557 179.681 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015025 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015025 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005565 0.00000