HEADER HYDROLASE 26-NOV-15 5FOV TITLE HUMANISED MONOMERIC RADA IN COMPLEX WITH FHTG TETRAPEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA REPAIR AND RECOMBINATION PROTEIN RADA; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: ATPASE, UNP RESIDUES 108-349; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: FHTG PEPTIDE; COMPND 9 CHAIN: E, F; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: ACETYLATED AT THE N-TERMINUS AND AMIDATED IN THE C- COMPND 12 TERMINUS SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS (STRAIN ATCC 43587 / DSM SOURCE 3 3638 / JCM 8422 / VC1); SOURCE 4 ORGANISM_TAXID: 186497; SOURCE 5 STRAIN: ATCC 43587 / DSM 3638 / JCM 8422 / VC1; SOURCE 6 GENE: RADA, PF1926; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VARIANT: PUBS520; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PBAT4; SOURCE 13 MOL_ID: 2; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_COMMON: HUMAN; SOURCE 17 ORGANISM_TAXID: 9606 KEYWDS HYDROLASE, RADA, FXXA MOTIF, RECOMBINASE EXPDTA X-RAY DIFFRACTION AUTHOR D.E.SCOTT,M.MARSH,T.L.BLUNDELL,C.ABELL,M.HYVONEN REVDAT 6 10-JAN-24 5FOV 1 REMARK REVDAT 5 19-JUN-19 5FOV 1 COMPND REMARK DBREF SEQADV REVDAT 5 2 1 HELIX SHEET LINK SITE REVDAT 5 3 1 ATOM REVDAT 4 02-MAY-18 5FOV 1 COMPND SOURCE REMARK DBREF REVDAT 4 2 1 SEQADV REVDAT 3 12-JUL-17 5FOV 1 REVDAT 2 18-MAY-16 5FOV 1 JRNL REVDAT 1 30-MAR-16 5FOV 0 JRNL AUTH D.E.SCOTT,M.MARSH,T.L.BLUNDELL,C.ABELL,M.HYVONEN JRNL TITL STRUCTURE ACTIVITY RELATIONSHIP OF THE PEPTIDE BINDING MOTIF JRNL TITL 2 MEDIATING THE RAD51:BRCA2 PROTEIN-PROTEIN INTERACTION. JRNL REF FEBS LETT. V. 590 1094 2016 JRNL REFN ISSN 0014-5793 JRNL PMID 26992456 JRNL DOI 10.1002/1873-3468.12139 REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.920 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.1 REMARK 3 NUMBER OF REFLECTIONS : 42189 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 4013 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.6302 - 5.3384 0.95 2669 164 0.1731 0.1902 REMARK 3 2 5.3384 - 4.2384 0.94 2620 177 0.1331 0.1637 REMARK 3 3 4.2384 - 3.7029 0.95 2646 135 0.1286 0.1795 REMARK 3 4 3.7029 - 3.3645 0.94 2642 160 0.1435 0.1924 REMARK 3 5 3.3645 - 3.1234 0.95 2670 126 0.1493 0.1790 REMARK 3 6 3.1234 - 2.9393 0.95 2736 137 0.1715 0.2037 REMARK 3 7 2.9393 - 2.7921 0.95 2678 139 0.1757 0.2191 REMARK 3 8 2.7921 - 2.6706 0.95 2652 129 0.1744 0.1849 REMARK 3 9 2.6706 - 2.5678 0.95 2703 173 0.1698 0.2373 REMARK 3 10 2.5678 - 2.4792 0.95 2677 143 0.1661 0.2000 REMARK 3 11 2.4792 - 2.4017 0.95 2632 161 0.1671 0.2252 REMARK 3 12 2.4017 - 2.3331 0.94 2639 157 0.1588 0.2379 REMARK 3 13 2.3331 - 2.2716 0.94 2671 132 0.1722 0.1761 REMARK 3 14 2.2716 - 2.2162 0.93 2623 153 0.1751 0.2124 REMARK 3 15 2.2162 - 2.1658 0.92 2607 160 0.1787 0.2616 REMARK 3 16 2.1658 - 2.1198 0.93 2536 154 0.1812 0.2513 REMARK 3 17 2.1198 - 2.0774 0.92 2687 115 0.1920 0.2632 REMARK 3 18 2.0774 - 2.0381 0.92 2563 143 0.1945 0.2409 REMARK 3 19 2.0381 - 2.0018 0.92 2580 146 0.2066 0.2576 REMARK 3 20 2.0018 - 1.9678 0.91 2577 115 0.2156 0.2767 REMARK 3 21 1.9678 - 1.9361 0.91 2568 133 0.2128 0.2103 REMARK 3 22 1.9361 - 1.9063 0.89 2524 125 0.2218 0.2652 REMARK 3 23 1.9063 - 1.8783 0.89 2522 127 0.2268 0.2999 REMARK 3 24 1.8783 - 1.8518 0.89 2488 132 0.2416 0.2472 REMARK 3 25 1.8518 - 1.8268 0.88 2479 136 0.2416 0.2915 REMARK 3 26 1.8268 - 1.8030 0.86 2485 132 0.2434 0.2860 REMARK 3 27 1.8030 - 1.7805 0.88 2455 140 0.2591 0.2856 REMARK 3 28 1.7805 - 1.7591 0.87 2450 110 0.2605 0.2304 REMARK 3 29 1.7591 - 1.7386 0.31 899 59 0.2839 0.3700 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3704 REMARK 3 ANGLE : 0.945 5004 REMARK 3 CHIRALITY : 0.040 564 REMARK 3 PLANARITY : 0.004 656 REMARK 3 DIHEDRAL : 13.813 1397 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FOV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1290065642. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42203 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.730 REMARK 200 RESOLUTION RANGE LOW (A) : 61.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 3.560 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.73 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.08 REMARK 200 R MERGE FOR SHELL (I) : 0.46000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 4B3B REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% PEG-1000, 100 MM NAK PHOSPHATE, PH REMARK 280 6.2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.61650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 107 REMARK 465 ASN A 300 REMARK 465 GLY A 301 REMARK 465 GLY A 302 REMARK 465 MET C 107 REMARK 465 GLN C 298 REMARK 465 ALA C 299 REMARK 465 ASN C 300 REMARK 465 GLY C 301 REMARK 465 GLY C 302 REMARK 465 HIS C 303 REMARK 465 ILE C 304 REMARK 465 LEU C 305 REMARK 465 ALA C 306 REMARK 465 HIS C 307 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 705 O HOH C 707 1.93 REMARK 500 O HOH A 794 O HOH A 797 1.93 REMARK 500 OXT ASP C 349 O HOH C 501 2.00 REMARK 500 O HOH C 673 O HOH C 714 2.00 REMARK 500 O HOH C 640 O HOH C 741 2.01 REMARK 500 O HOH C 598 O HOH C 728 2.02 REMARK 500 O HOH C 530 O HOH C 749 2.05 REMARK 500 O HOH A 804 O HOH A 806 2.05 REMARK 500 O HOH C 770 O HOH C 772 2.06 REMARK 500 O HOH A 542 O HOH A 760 2.07 REMARK 500 O HOH C 722 O HOH C 750 2.08 REMARK 500 O HOH A 531 O HOH A 721 2.10 REMARK 500 O HOH A 827 O HOH A 831 2.11 REMARK 500 O HOH A 517 O HOH A 713 2.11 REMARK 500 O GLN A 286 O HOH A 501 2.11 REMARK 500 OG1 THR F 105 O HOH F 201 2.12 REMARK 500 OH TYR A 314 O HOH A 502 2.12 REMARK 500 O HOH C 514 O HOH C 698 2.13 REMARK 500 O HOH C 533 O HOH C 687 2.14 REMARK 500 O HOH A 813 O HOH E 107 2.17 REMARK 500 O HOH A 701 O HOH A 767 2.17 REMARK 500 OD1 ASP A 329 O HOH A 503 2.17 REMARK 500 O HOH A 507 O HOH A 798 2.17 REMARK 500 O HOH C 519 O HOH C 559 2.18 REMARK 500 O HOH C 615 O HOH C 736 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH C 655 O HOH C 710 2646 2.10 REMARK 500 O HOH A 632 O HOH C 516 2655 2.15 REMARK 500 O HOH A 702 O HOH A 703 2555 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 286 -96.96 -113.21 REMARK 500 ILE A 304 1.48 54.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 834 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH C 782 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH C 783 DISTANCE = 6.43 ANGSTROMS REMARK 525 HOH C 784 DISTANCE = 6.78 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE E 0 and PHE E 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GLY E 4 and NH2 E 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE F 101 and PHE F REMARK 800 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GLY F 106 and NH2 F REMARK 800 108 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FOS RELATED DB: PDB REMARK 900 HUMANISED MONOMERIC RADA IN COMPLEX WITH OLIGOMERISATION PEPTIDE REMARK 900 RELATED ID: 5FOT RELATED DB: PDB REMARK 900 HUMANISED MONOMERIC RADA IN COMPLEX WITH FHTU TETRAPEPTIDE REMARK 900 RELATED ID: 5FOU RELATED DB: PDB REMARK 900 HUMANISED MONOMERIC RADA IN COMPLEX WITH FHPA TETRAPEPTIDE REMARK 900 RELATED ID: 5FOW RELATED DB: PDB REMARK 900 HUMANISED MONOMERIC RADA IN COMPLEX WITH WHTA TETRAPEPTIDE REMARK 900 RELATED ID: 5FOX RELATED DB: PDB REMARK 900 HUMANISED MONOMERIC RADA IN COMPLEX WITH FHAA TETRAPEPTIDE REMARK 999 REMARK 999 SEQUENCE REMARK 999 MUTATIONS I169M, Y201A, V202Y, K221M AND REPLACEMENT OF REMARK 999 LOOP 287-300 BY AN N. DBREF 5FOV A 108 349 UNP O74036 RADA_PYRFU 108 349 DBREF 5FOV C 108 349 UNP O74036 RADA_PYRFU 108 349 DBREF 5FOV E 0 5 PDB 5FOV 5FOV 0 5 DBREF 5FOV F 101 106 PDB 5FOV 5FOV 101 106 SEQADV 5FOV MET A 107 UNP O74036 INITIATING METHIONINE SEQADV 5FOV MET A 169 UNP O74036 ILE 169 ENGINEERED MUTATION SEQADV 5FOV ALA A 201 UNP O74036 TYR 201 ENGINEERED MUTATION SEQADV 5FOV TYR A 202 UNP O74036 VAL 202 ENGINEERED MUTATION SEQADV 5FOV MET A 221 UNP O74036 LYS 221 ENGINEERED MUTATION SEQADV 5FOV ASN A 300 UNP O74036 ARG 288 ENGINEERED MUTATION SEQADV 5FOV A UNP O74036 PRO 289 DELETION SEQADV 5FOV A UNP O74036 ASP 290 DELETION SEQADV 5FOV A UNP O74036 ALA 291 DELETION SEQADV 5FOV A UNP O74036 PHE 292 DELETION SEQADV 5FOV A UNP O74036 PHE 293 DELETION SEQADV 5FOV A UNP O74036 GLY 294 DELETION SEQADV 5FOV A UNP O74036 ASP 295 DELETION SEQADV 5FOV A UNP O74036 PRO 296 DELETION SEQADV 5FOV A UNP O74036 THR 297 DELETION SEQADV 5FOV A UNP O74036 ARG 298 DELETION SEQADV 5FOV A UNP O74036 PRO 299 DELETION SEQADV 5FOV A UNP O74036 ILE 300 DELETION SEQADV 5FOV MET C 107 UNP O74036 INITIATING METHIONINE SEQADV 5FOV MET C 169 UNP O74036 ILE 169 ENGINEERED MUTATION SEQADV 5FOV ALA C 201 UNP O74036 TYR 201 ENGINEERED MUTATION SEQADV 5FOV TYR C 202 UNP O74036 VAL 202 ENGINEERED MUTATION SEQADV 5FOV MET C 221 UNP O74036 LYS 221 ENGINEERED MUTATION SEQADV 5FOV ASN C 300 UNP O74036 ARG 288 ENGINEERED MUTATION SEQADV 5FOV C UNP O74036 PRO 289 DELETION SEQADV 5FOV C UNP O74036 ASP 290 DELETION SEQADV 5FOV C UNP O74036 ALA 291 DELETION SEQADV 5FOV C UNP O74036 PHE 292 DELETION SEQADV 5FOV C UNP O74036 PHE 293 DELETION SEQADV 5FOV C UNP O74036 GLY 294 DELETION SEQADV 5FOV C UNP O74036 ASP 295 DELETION SEQADV 5FOV C UNP O74036 PRO 296 DELETION SEQADV 5FOV C UNP O74036 THR 297 DELETION SEQADV 5FOV C UNP O74036 ARG 298 DELETION SEQADV 5FOV C UNP O74036 PRO 299 DELETION SEQADV 5FOV C UNP O74036 ILE 300 DELETION SEQRES 1 A 231 MET ALA THR ILE GLY ARG ILE SER THR GLY SER LYS SER SEQRES 2 A 231 LEU ASP LYS LEU LEU GLY GLY GLY ILE GLU THR GLN ALA SEQRES 3 A 231 ILE THR GLU VAL PHE GLY GLU PHE GLY SER GLY LYS THR SEQRES 4 A 231 GLN LEU ALA HIS THR LEU ALA VAL MET VAL GLN LEU PRO SEQRES 5 A 231 PRO GLU GLU GLY GLY LEU ASN GLY SER VAL MET TRP ILE SEQRES 6 A 231 ASP THR GLU ASN THR PHE ARG PRO GLU ARG ILE ARG GLU SEQRES 7 A 231 ILE ALA GLN ASN ARG GLY LEU ASP PRO ASP GLU VAL LEU SEQRES 8 A 231 LYS HIS ILE ALA TYR ALA ARG ALA PHE ASN SER ASN HIS SEQRES 9 A 231 GLN MET LEU LEU VAL GLN GLN ALA GLU ASP MET ILE LYS SEQRES 10 A 231 GLU LEU LEU ASN THR ASP ARG PRO VAL LYS LEU LEU ILE SEQRES 11 A 231 VAL ASP SER LEU THR SER HIS PHE ARG SER GLU TYR ILE SEQRES 12 A 231 GLY ARG GLY ALA LEU ALA GLU ARG GLN GLN LYS LEU ALA SEQRES 13 A 231 LYS HIS LEU ALA ASP LEU HIS ARG LEU ALA ASN LEU TYR SEQRES 14 A 231 ASP ILE ALA VAL PHE VAL THR ASN GLN VAL GLN ALA ASN SEQRES 15 A 231 GLY GLY HIS ILE LEU ALA HIS SER ALA THR LEU ARG VAL SEQRES 16 A 231 TYR LEU ARG LYS GLY LYS GLY GLY LYS ARG ILE ALA ARG SEQRES 17 A 231 LEU ILE ASP ALA PRO HIS LEU PRO GLU GLY GLU ALA VAL SEQRES 18 A 231 PHE SER ILE THR GLU LYS GLY ILE GLU ASP SEQRES 1 C 231 MET ALA THR ILE GLY ARG ILE SER THR GLY SER LYS SER SEQRES 2 C 231 LEU ASP LYS LEU LEU GLY GLY GLY ILE GLU THR GLN ALA SEQRES 3 C 231 ILE THR GLU VAL PHE GLY GLU PHE GLY SER GLY LYS THR SEQRES 4 C 231 GLN LEU ALA HIS THR LEU ALA VAL MET VAL GLN LEU PRO SEQRES 5 C 231 PRO GLU GLU GLY GLY LEU ASN GLY SER VAL MET TRP ILE SEQRES 6 C 231 ASP THR GLU ASN THR PHE ARG PRO GLU ARG ILE ARG GLU SEQRES 7 C 231 ILE ALA GLN ASN ARG GLY LEU ASP PRO ASP GLU VAL LEU SEQRES 8 C 231 LYS HIS ILE ALA TYR ALA ARG ALA PHE ASN SER ASN HIS SEQRES 9 C 231 GLN MET LEU LEU VAL GLN GLN ALA GLU ASP MET ILE LYS SEQRES 10 C 231 GLU LEU LEU ASN THR ASP ARG PRO VAL LYS LEU LEU ILE SEQRES 11 C 231 VAL ASP SER LEU THR SER HIS PHE ARG SER GLU TYR ILE SEQRES 12 C 231 GLY ARG GLY ALA LEU ALA GLU ARG GLN GLN LYS LEU ALA SEQRES 13 C 231 LYS HIS LEU ALA ASP LEU HIS ARG LEU ALA ASN LEU TYR SEQRES 14 C 231 ASP ILE ALA VAL PHE VAL THR ASN GLN VAL GLN ALA ASN SEQRES 15 C 231 GLY GLY HIS ILE LEU ALA HIS SER ALA THR LEU ARG VAL SEQRES 16 C 231 TYR LEU ARG LYS GLY LYS GLY GLY LYS ARG ILE ALA ARG SEQRES 17 C 231 LEU ILE ASP ALA PRO HIS LEU PRO GLU GLY GLU ALA VAL SEQRES 18 C 231 PHE SER ILE THR GLU LYS GLY ILE GLU ASP SEQRES 1 E 6 ACE PHE HIS THR GLY NH2 SEQRES 1 F 6 ACE PHE HIS THR GLY NH2 HET ACE E 0 3 HET NH2 E 5 1 HET ACE F 101 3 HET NH2 F 108 1 HET PO4 A 401 5 HET PO4 C 401 5 HET GOL C 402 6 HETNAM ACE ACETYL GROUP HETNAM NH2 AMINO GROUP HETNAM PO4 PHOSPHATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ACE 2(C2 H4 O) FORMUL 3 NH2 2(H2 N) FORMUL 5 PO4 2(O4 P 3-) FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *634(H2 O) HELIX 1 AA1 SER A 117 LEU A 124 1 8 HELIX 2 AA2 GLY A 143 VAL A 155 1 13 HELIX 3 AA3 GLN A 156 LEU A 157 5 2 HELIX 4 AA4 PRO A 158 GLY A 162 5 5 HELIX 5 AA5 ARG A 178 ARG A 189 1 12 HELIX 6 AA6 ASP A 192 HIS A 199 1 8 HELIX 7 AA7 ASN A 207 LEU A 226 1 20 HELIX 8 AA8 THR A 241 TYR A 248 1 8 HELIX 9 AA9 GLY A 252 ASP A 276 1 25 HELIX 10 AB1 LYS A 319 GLY A 321 5 3 HELIX 11 AB2 SER C 117 LEU C 124 1 8 HELIX 12 AB3 GLY C 143 VAL C 155 1 13 HELIX 13 AB4 GLN C 156 LEU C 157 5 2 HELIX 14 AB5 PRO C 158 GLY C 162 5 5 HELIX 15 AB6 ARG C 178 ASN C 188 1 11 HELIX 16 AB7 ASP C 192 HIS C 199 1 8 HELIX 17 AB8 ASN C 207 LEU C 226 1 20 HELIX 18 AB9 THR C 241 TYR C 248 1 8 HELIX 19 AC1 GLY C 252 ASP C 276 1 25 HELIX 20 AC2 LYS C 319 GLY C 321 5 3 SHEET 1 AA1 2 ARG A 112 ILE A 113 0 SHEET 2 AA1 2 ILE A 128 GLU A 129 -1 O ILE A 128 N ILE A 113 SHEET 1 AA210 GLY A 346 GLU A 348 0 SHEET 2 AA210 ALA A 338 THR A 343 -1 N SER A 341 O GLU A 348 SHEET 3 AA210 ARG A 323 ILE A 328 -1 N ARG A 323 O PHE A 340 SHEET 4 AA210 LEU A 311 LYS A 317 -1 N TYR A 314 O ARG A 326 SHEET 5 AA210 ALA A 132 GLY A 138 1 N GLU A 135 O VAL A 313 SHEET 6 AA210 ALA A 278 GLN A 284 1 O VAL A 279 N THR A 134 SHEET 7 AA210 VAL A 232 ASP A 238 1 N LEU A 235 O PHE A 280 SHEET 8 AA210 SER A 167 ASP A 172 1 N ILE A 171 O ILE A 236 SHEET 9 AA210 ILE A 200 ARG A 204 1 O ALA A 201 N VAL A 168 SHEET 10 AA210 HIS E 2 THR E 3 -1 O HIS E 2 N TYR A 202 SHEET 1 AA3 2 ARG C 112 ILE C 113 0 SHEET 2 AA3 2 ILE C 128 GLU C 129 -1 O ILE C 128 N ILE C 113 SHEET 1 AA410 GLY C 346 GLU C 348 0 SHEET 2 AA410 ALA C 338 THR C 343 -1 N SER C 341 O GLU C 348 SHEET 3 AA410 ARG C 323 ILE C 328 -1 N ARG C 323 O PHE C 340 SHEET 4 AA410 LEU C 311 LYS C 317 -1 N TYR C 314 O ARG C 326 SHEET 5 AA410 ALA C 132 GLY C 138 1 N GLU C 135 O VAL C 313 SHEET 6 AA410 ALA C 278 GLN C 284 1 O VAL C 279 N THR C 134 SHEET 7 AA410 VAL C 232 ASP C 238 1 N LEU C 235 O PHE C 280 SHEET 8 AA410 SER C 167 ASP C 172 1 N ILE C 171 O ILE C 236 SHEET 9 AA410 ILE C 200 ARG C 204 1 O ALA C 201 N VAL C 168 SHEET 10 AA410 HIS F 104 THR F 105 -1 O HIS F 104 N TYR C 202 LINK C ACE E 0 N PHE E 1 1555 1555 1.33 LINK C GLY E 4 N NH2 E 5 1555 1555 1.33 LINK C ACE F 101 N PHE F 103 1555 1555 1.33 LINK C GLY F 106 N NH2 F 108 1555 1555 1.33 CISPEP 1 ASP A 238 SER A 239 0 5.33 CISPEP 2 ASP C 238 SER C 239 0 6.18 SITE 1 AC1 10 GLU A 139 GLY A 141 SER A 142 GLY A 143 SITE 2 AC1 10 LYS A 144 THR A 145 HOH A 539 HOH A 563 SITE 3 AC1 10 HOH A 592 HOH A 673 SITE 1 AC2 13 GLU C 139 PHE C 140 GLY C 141 SER C 142 SITE 2 AC2 13 GLY C 143 LYS C 144 THR C 145 HOH C 530 SITE 3 AC2 13 HOH C 546 HOH C 550 HOH C 575 HOH C 613 SITE 4 AC2 13 HOH C 659 SITE 1 AC3 5 HIS C 243 SER C 246 GLU C 247 HOH C 562 SITE 2 AC3 5 HOH C 577 SITE 1 AC4 9 MET A 169 ALA A 201 TYR A 202 ALA A 203 SITE 2 AC4 9 LEU A 214 HIS E 2 HOH E 103 HOH E 104 SITE 3 AC4 9 HOH E 105 SITE 1 AC5 6 PHE A 177 LEU A 197 ILE A 200 HIS E 2 SITE 2 AC5 6 THR E 3 HOH E 102 SITE 1 AC6 7 ALA C 201 TYR C 202 ALA C 203 LEU C 214 SITE 2 AC6 7 HIS F 104 HOH F 202 HOH F 203 SITE 1 AC7 5 PHE C 177 LEU C 197 ILE C 200 HIS F 104 SITE 2 AC7 5 THR F 105 CRYST1 40.334 87.233 61.543 90.00 92.31 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024793 0.000000 0.001000 0.00000 SCALE2 0.000000 0.011464 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016262 0.00000