HEADER TOXIN 15-DEC-15 5FR3 TITLE X-RAY CRYSTAL STRUCTURE OF AGGREGATION-RESISTANT PROTECTIVE ANTIGEN OF TITLE 2 BACILLUS ANTHRACIS (MUTANT S559L T576E) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTECTIVE ANTIGEN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PA, ANTHRAX TOXINS TRANSLOCATING PROTEIN, PA-83, PA83, COMPND 5 ANTHRAX PROTECTIVE ANTIGEN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_TAXID: 1392; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PET22B; SOURCE 8 OTHER_DETAILS: SYNTHETIC GENE KEYWDS TOXIN, ANTHRAX PROTECTIVE ANTIGEN EXPDTA X-RAY DIFFRACTION AUTHOR A.GANESAN,A.SIEKIERSKA,J.BEERTEN,M.BRAMS,J.VAN DURME,G.DE BAETS,R.VAN AUTHOR 2 DER KANT,R.GALLARDO,M.RAMAKERS,T.LANGENBERG,H.WILKINSON,F.DE SMET, AUTHOR 3 C.ULENS,F.ROUSSEAU,J.SCHYMKOWITZ REVDAT 4 10-JAN-24 5FR3 1 REMARK LINK REVDAT 3 09-MAR-16 5FR3 1 JRNL REVDAT 2 02-MAR-16 5FR3 1 AUTHOR JRNL REVDAT 1 27-JAN-16 5FR3 0 JRNL AUTH A.GANESAN,A.SIEKIERSKA,J.BEERTEN,M.BRAMS,J.VAN DURME, JRNL AUTH 2 G.DE BAETS,R.VAN DER KANT,R.GALLARDO,M.RAMAKERS, JRNL AUTH 3 T.LANGENBERG,H.WILKINSON,F.DE SMET,C.ULENS,F.ROUSSEAU, JRNL AUTH 4 J.SCHYMKOWITZ JRNL TITL STRUCTURAL HOT SPOTS FOR THE SOLUBILITY OF GLOBULAR PROTEINS JRNL REF NAT.COMMUN. V. 7 10816 2016 JRNL REFN ESSN 2041-1723 JRNL PMID 26905391 JRNL DOI 10.1038/NCOMMS10816 REMARK 2 REMARK 2 RESOLUTION. 1.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 60664 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.300 REMARK 3 FREE R VALUE TEST SET COUNT : 2016 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.4450 - 4.6621 1.00 4445 152 0.1729 0.2121 REMARK 3 2 4.6621 - 3.7010 1.00 4290 145 0.1430 0.1712 REMARK 3 3 3.7010 - 3.2333 1.00 4239 143 0.1576 0.2169 REMARK 3 4 3.2333 - 2.9378 1.00 4207 146 0.1765 0.2173 REMARK 3 5 2.9378 - 2.7272 1.00 4196 146 0.1791 0.2540 REMARK 3 6 2.7272 - 2.5665 1.00 4196 152 0.1875 0.2416 REMARK 3 7 2.5665 - 2.4379 1.00 4200 134 0.1849 0.2625 REMARK 3 8 2.4379 - 2.3318 1.00 4162 158 0.1888 0.2424 REMARK 3 9 2.3318 - 2.2421 1.00 4185 134 0.1907 0.2388 REMARK 3 10 2.2421 - 2.1647 1.00 4135 136 0.1985 0.2361 REMARK 3 11 2.1647 - 2.0970 1.00 4157 153 0.2120 0.2929 REMARK 3 12 2.0970 - 2.0371 1.00 4192 127 0.2199 0.2616 REMARK 3 13 2.0371 - 1.9834 1.00 4139 144 0.2401 0.3188 REMARK 3 14 1.9834 - 1.9350 0.95 3905 146 0.2700 0.3059 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.48 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5602 REMARK 3 ANGLE : 0.953 7599 REMARK 3 CHIRALITY : 0.068 862 REMARK 3 PLANARITY : 0.004 992 REMARK 3 DIHEDRAL : 14.025 2103 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 14:177) REMARK 3 ORIGIN FOR THE GROUP (A): -4.2084 -42.1660 -23.8495 REMARK 3 T TENSOR REMARK 3 T11: 0.3184 T22: 0.4140 REMARK 3 T33: 0.2244 T12: 0.0933 REMARK 3 T13: -0.0422 T23: -0.0719 REMARK 3 L TENSOR REMARK 3 L11: 2.9329 L22: 3.0829 REMARK 3 L33: 4.5157 L12: 1.3215 REMARK 3 L13: 0.5445 L23: 0.5180 REMARK 3 S TENSOR REMARK 3 S11: 0.0154 S12: 0.4872 S13: -0.3944 REMARK 3 S21: -0.0987 S22: 0.1736 S23: 0.0157 REMARK 3 S31: 0.4907 S32: 0.0087 S33: -0.1401 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 178:521) REMARK 3 ORIGIN FOR THE GROUP (A): -1.5792 -29.2269 16.0060 REMARK 3 T TENSOR REMARK 3 T11: 0.1730 T22: 0.1349 REMARK 3 T33: 0.1883 T12: 0.0800 REMARK 3 T13: 0.0012 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.6680 L22: 0.6276 REMARK 3 L33: 3.6618 L12: 0.0167 REMARK 3 L13: -0.4460 L23: -0.1779 REMARK 3 S TENSOR REMARK 3 S11: 0.0516 S12: 0.0166 S13: 0.0029 REMARK 3 S21: 0.0014 S22: -0.0212 S23: -0.0034 REMARK 3 S31: 0.2683 S32: 0.0383 S33: -0.0241 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 522:735) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1462 -5.0848 27.2328 REMARK 3 T TENSOR REMARK 3 T11: 0.1678 T22: 0.1428 REMARK 3 T33: 0.2948 T12: 0.0441 REMARK 3 T13: -0.0281 T23: -0.0455 REMARK 3 L TENSOR REMARK 3 L11: 1.2634 L22: 0.9429 REMARK 3 L33: 2.4691 L12: -0.4335 REMARK 3 L13: -1.0595 L23: 1.1512 REMARK 3 S TENSOR REMARK 3 S11: -0.0407 S12: -0.0303 S13: 0.2447 REMARK 3 S21: -0.0173 S22: -0.1295 S23: 0.1338 REMARK 3 S31: -0.0451 S32: -0.0990 S33: 0.1084 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FR3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1290065798. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92045 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 203741 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.940 REMARK 200 RESOLUTION RANGE LOW (A) : 44.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.01000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.83000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1ACC REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 MM MGCL2, 100 MM HEPES PH 7.5, 22% REMARK 280 POLY(ACRYLIC ACID SODIUM SALT) 5100 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.27350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.31350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.35700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.31350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.27350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.35700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 164 REMARK 465 LYS A 165 REMARK 465 LYS A 166 REMARK 465 ARG A 167 REMARK 465 SER A 168 REMARK 465 GLN A 277 REMARK 465 SER A 278 REMARK 465 THR A 279 REMARK 465 GLN A 280 REMARK 465 ASN A 281 REMARK 465 THR A 282 REMARK 465 ASP A 283 REMARK 465 SER A 284 REMARK 465 GLN A 285 REMARK 465 THR A 286 REMARK 465 HIS A 304 REMARK 465 GLY A 305 REMARK 465 ASN A 306 REMARK 465 ALA A 307 REMARK 465 GLU A 308 REMARK 465 VAL A 309 REMARK 465 HIS A 310 REMARK 465 ALA A 311 REMARK 465 SER A 312 REMARK 465 PHE A 313 REMARK 465 PHE A 314 REMARK 465 ASP A 315 REMARK 465 ILE A 316 REMARK 465 GLY A 317 REMARK 465 GLY A 318 REMARK 465 SER A 319 REMARK 465 LEU A 340 REMARK 465 ALA A 341 REMARK 465 GLY A 342 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 99 CG CD CE NZ REMARK 470 ASP A 276 CG OD1 OD2 REMARK 470 ARG A 287 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 343 CG CD OE1 OE2 REMARK 470 ARG A 344 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2034 O HOH A 2130 2.09 REMARK 500 O HOH A 2161 O HOH A 2454 2.10 REMARK 500 O HOH A 2135 O HOH A 2157 2.14 REMARK 500 O HOH A 2575 O HOH A 2577 2.14 REMARK 500 O HOH A 2459 O HOH A 2460 2.14 REMARK 500 O HOH A 2161 O HOH A 2448 2.15 REMARK 500 OE2 GLU A 549 O HOH A 2515 2.16 REMARK 500 O HOH A 2136 O HOH A 2163 2.17 REMARK 500 OG SER A 208 O HOH A 2183 2.17 REMARK 500 OD1 ASP A 632 O HOH A 2586 2.18 REMARK 500 ND2 ASN A 509 O HOH A 2460 2.19 REMARK 500 O HOH A 2204 O HOH A 2205 2.19 REMARK 500 OD1 ASP A 426 O HOH A 2407 2.19 REMARK 500 O ASN A 274 O HOH A 2272 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2137 O HOH A 2600 3545 2.15 REMARK 500 O HOH A 2127 O HOH A 2515 3545 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 31 78.97 -119.09 REMARK 500 GLU A 49 31.02 -97.85 REMARK 500 LYS A 73 109.46 -169.11 REMARK 500 ALA A 83 65.12 -154.74 REMARK 500 LEU A 156 57.51 -91.23 REMARK 500 SER A 170 -110.75 55.41 REMARK 500 ALA A 171 75.59 60.59 REMARK 500 ASP A 177 71.78 -150.23 REMARK 500 ASN A 198 -114.63 58.39 REMARK 500 ASP A 244 123.59 -37.77 REMARK 500 ARG A 344 -155.82 -115.86 REMARK 500 ASN A 388 32.95 -156.09 REMARK 500 VAL A 480 -41.77 -130.89 REMARK 500 ASP A 497 21.06 -150.58 REMARK 500 LEU A 498 -4.64 78.79 REMARK 500 GLU A 535 72.57 -155.33 REMARK 500 ASN A 657 68.89 -103.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2106 DISTANCE = 7.45 ANGSTROMS REMARK 525 HOH A2139 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A2664 DISTANCE = 7.20 ANGSTROMS REMARK 525 HOH A2666 DISTANCE = 8.59 ANGSTROMS REMARK 525 HOH A2667 DISTANCE = 7.46 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1736 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 177 OD1 REMARK 620 2 ASP A 179 OD1 79.8 REMARK 620 3 ASP A 181 OD1 90.1 80.0 REMARK 620 4 ILE A 183 O 85.8 165.0 95.9 REMARK 620 5 GLU A 188 OE2 177.7 97.9 89.6 96.5 REMARK 620 6 HOH A2155 O 93.6 80.8 159.4 104.6 85.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1737 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 179 OD2 REMARK 620 2 ASP A 181 OD2 89.1 REMARK 620 3 GLU A 188 OE1 125.3 91.1 REMARK 620 4 GLU A 188 OE2 79.9 72.6 48.5 REMARK 620 5 SER A 222 O 83.2 158.3 77.1 86.0 REMARK 620 6 LYS A 225 O 74.4 110.8 151.7 154.0 86.7 REMARK 620 7 ASP A 235 OD2 155.5 91.4 79.2 123.4 104.0 82.5 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1736 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1737 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1738 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1739 DBREF 5FR3 A 14 735 UNP P13423 PAG_BACAN 43 764 SEQADV 5FR3 LEU A 559 UNP P13423 SER 588 ENGINEERED MUTATION SEQADV 5FR3 GLU A 576 UNP P13423 THR 605 ENGINEERED MUTATION SEQRES 1 A 722 SER SER SER GLN GLY LEU LEU GLY TYR TYR PHE SER ASP SEQRES 2 A 722 LEU ASN PHE GLN ALA PRO MET VAL VAL THR SER SER THR SEQRES 3 A 722 THR GLY ASP LEU SER ILE PRO SER SER GLU LEU GLU ASN SEQRES 4 A 722 ILE PRO SER GLU ASN GLN TYR PHE GLN SER ALA ILE TRP SEQRES 5 A 722 SER GLY PHE ILE LYS VAL LYS LYS SER ASP GLU TYR THR SEQRES 6 A 722 PHE ALA THR SER ALA ASP ASN HIS VAL THR MET TRP VAL SEQRES 7 A 722 ASP ASP GLN GLU VAL ILE ASN LYS ALA SER ASN SER ASN SEQRES 8 A 722 LYS ILE ARG LEU GLU LYS GLY ARG LEU TYR GLN ILE LYS SEQRES 9 A 722 ILE GLN TYR GLN ARG GLU ASN PRO THR GLU LYS GLY LEU SEQRES 10 A 722 ASP PHE LYS LEU TYR TRP THR ASP SER GLN ASN LYS LYS SEQRES 11 A 722 GLU VAL ILE SER SER ASP ASN LEU GLN LEU PRO GLU LEU SEQRES 12 A 722 LYS GLN LYS SER SER ASN SER ARG LYS LYS ARG SER THR SEQRES 13 A 722 SER ALA GLY PRO THR VAL PRO ASP ARG ASP ASN ASP GLY SEQRES 14 A 722 ILE PRO ASP SER LEU GLU VAL GLU GLY TYR THR VAL ASP SEQRES 15 A 722 VAL LYS ASN LYS ARG THR PHE LEU SER PRO TRP ILE SER SEQRES 16 A 722 ASN ILE HIS GLU LYS LYS GLY LEU THR LYS TYR LYS SER SEQRES 17 A 722 SER PRO GLU LYS TRP SER THR ALA SER ASP PRO TYR SER SEQRES 18 A 722 ASP PHE GLU LYS VAL THR GLY ARG ILE ASP LYS ASN VAL SEQRES 19 A 722 SER PRO GLU ALA ARG HIS PRO LEU VAL ALA ALA TYR PRO SEQRES 20 A 722 ILE VAL HIS VAL ASP MET GLU ASN ILE ILE LEU SER LYS SEQRES 21 A 722 ASN GLU ASP GLN SER THR GLN ASN THR ASP SER GLN THR SEQRES 22 A 722 ARG THR ILE SER LYS ASN THR SER THR SER ARG THR HIS SEQRES 23 A 722 THR SER GLU VAL HIS GLY ASN ALA GLU VAL HIS ALA SER SEQRES 24 A 722 PHE PHE ASP ILE GLY GLY SER VAL SER ALA GLY PHE SER SEQRES 25 A 722 ASN SER ASN SER SER THR VAL ALA ILE ASP HIS SER LEU SEQRES 26 A 722 SER LEU ALA GLY GLU ARG THR TRP ALA GLU THR MET GLY SEQRES 27 A 722 LEU ASN THR ALA ASP THR ALA ARG LEU ASN ALA ASN ILE SEQRES 28 A 722 ARG TYR VAL ASN THR GLY THR ALA PRO ILE TYR ASN VAL SEQRES 29 A 722 LEU PRO THR THR SER LEU VAL LEU GLY LYS ASN GLN THR SEQRES 30 A 722 LEU ALA THR ILE LYS ALA LYS GLU ASN GLN LEU SER GLN SEQRES 31 A 722 ILE LEU ALA PRO ASN ASN TYR TYR PRO SER LYS ASN LEU SEQRES 32 A 722 ALA PRO ILE ALA LEU ASN ALA GLN ASP ASP PHE SER SER SEQRES 33 A 722 THR PRO ILE THR MET ASN TYR ASN GLN PHE LEU GLU LEU SEQRES 34 A 722 GLU LYS THR LYS GLN LEU ARG LEU ASP THR ASP GLN VAL SEQRES 35 A 722 TYR GLY ASN ILE ALA THR TYR ASN PHE GLU ASN GLY ARG SEQRES 36 A 722 VAL ARG VAL ASP THR GLY SER ASN TRP SER GLU VAL LEU SEQRES 37 A 722 PRO GLN ILE GLN GLU THR THR ALA ARG ILE ILE PHE ASN SEQRES 38 A 722 GLY LYS ASP LEU ASN LEU VAL GLU ARG ARG ILE ALA ALA SEQRES 39 A 722 VAL ASN PRO SER ASP PRO LEU GLU THR THR LYS PRO ASP SEQRES 40 A 722 MET THR LEU LYS GLU ALA LEU LYS ILE ALA PHE GLY PHE SEQRES 41 A 722 ASN GLU PRO ASN GLY ASN LEU GLN TYR GLN GLY LYS ASP SEQRES 42 A 722 ILE THR GLU PHE ASP PHE ASN PHE ASP GLN GLN THR LEU SEQRES 43 A 722 GLN ASN ILE LYS ASN GLN LEU ALA GLU LEU ASN ALA THR SEQRES 44 A 722 ASN ILE TYR GLU VAL LEU ASP LYS ILE LYS LEU ASN ALA SEQRES 45 A 722 LYS MET ASN ILE LEU ILE ARG ASP LYS ARG PHE HIS TYR SEQRES 46 A 722 ASP ARG ASN ASN ILE ALA VAL GLY ALA ASP GLU SER VAL SEQRES 47 A 722 VAL LYS GLU ALA HIS ARG GLU VAL ILE ASN SER SER THR SEQRES 48 A 722 GLU GLY LEU LEU LEU ASN ILE ASP LYS ASP ILE ARG LYS SEQRES 49 A 722 ILE LEU SER GLY TYR ILE VAL GLU ILE GLU ASP THR GLU SEQRES 50 A 722 GLY LEU LYS GLU VAL ILE ASN ASP ARG TYR ASP MET LEU SEQRES 51 A 722 ASN ILE SER SER LEU ARG GLN ASP GLY LYS THR PHE ILE SEQRES 52 A 722 ASP PHE LYS LYS TYR ASN ASP LYS LEU PRO LEU TYR ILE SEQRES 53 A 722 SER ASN PRO ASN TYR LYS VAL ASN VAL TYR ALA VAL THR SEQRES 54 A 722 LYS GLU ASN THR ILE ILE ASN PRO SER GLU ASN GLY ASP SEQRES 55 A 722 THR SER THR ASN GLY ILE LYS LYS ILE LEU ILE PHE SER SEQRES 56 A 722 LYS LYS GLY TYR GLU ILE GLY HET CA A1736 1 HET CA A1737 1 HET GOL A1738 6 HET GOL A1739 6 HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CA 2(CA 2+) FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 HOH *667(H2 O) HELIX 1 1 PRO A 46 LEU A 50 5 5 HELIX 2 2 PRO A 54 GLN A 58 5 5 HELIX 3 3 ALA A 83 ASN A 85 5 3 HELIX 4 4 SER A 147 ASP A 149 5 3 HELIX 5 5 PRO A 184 GLY A 191 1 8 HELIX 6 6 ILE A 207 GLU A 212 1 6 HELIX 7 7 LYS A 213 GLY A 215 5 3 HELIX 8 8 SER A 234 THR A 240 1 7 HELIX 9 9 SER A 248 HIS A 253 5 6 HELIX 10 10 THR A 345 MET A 350 1 6 HELIX 11 11 TYR A 436 LYS A 446 1 11 HELIX 12 12 VAL A 480 THR A 487 1 8 HELIX 13 13 PRO A 513 THR A 517 5 5 HELIX 14 14 THR A 522 GLY A 532 1 11 HELIX 15 15 ASP A 555 LEU A 569 1 15 HELIX 16 16 ILE A 574 LEU A 578 5 5 HELIX 17 17 ASP A 608 HIS A 616 1 9 HELIX 18 18 ASP A 632 ILE A 638 1 7 HELIX 19 19 GLU A 704 THR A 706 5 3 HELIX 20 20 GLY A 731 GLY A 735 1 5 SHEET 1 AA 4 PRO A 32 SER A 38 0 SHEET 2 AA 4 LEU A 19 PHE A 24 -1 O LEU A 19 N SER A 38 SHEET 3 AA 4 SER A 62 ILE A 69 -1 O SER A 62 N PHE A 24 SHEET 4 AA 4 LEU A 151 GLN A 152 -1 O GLN A 152 N PHE A 68 SHEET 1 AB 6 PRO A 32 SER A 38 0 SHEET 2 AB 6 LEU A 19 PHE A 24 -1 O LEU A 19 N SER A 38 SHEET 3 AB 6 SER A 62 ILE A 69 -1 O SER A 62 N PHE A 24 SHEET 4 AB 6 TYR A 114 GLN A 121 -1 O TYR A 114 N ILE A 69 SHEET 5 AB 6 VAL A 87 VAL A 91 -1 O THR A 88 N GLN A 119 SHEET 6 AB 6 GLN A 94 ASN A 98 -1 O GLN A 94 N VAL A 91 SHEET 1 AC 2 LEU A 151 GLN A 152 0 SHEET 2 AC 2 SER A 62 ILE A 69 -1 O PHE A 68 N GLN A 152 SHEET 1 AD 4 ILE A 106 LEU A 108 0 SHEET 2 AD 4 ASP A 75 THR A 81 -1 O ASP A 75 N LEU A 108 SHEET 3 AD 4 LEU A 134 THR A 137 -1 O TYR A 135 N ALA A 80 SHEET 4 AD 4 LYS A 143 VAL A 145 -1 O GLU A 144 N TRP A 136 SHEET 1 AE 2 TYR A 192 LYS A 197 0 SHEET 2 AE 2 ARG A 200 PRO A 205 -1 O ARG A 200 N LYS A 197 SHEET 1 AF 8 GLN A 389 ILE A 394 0 SHEET 2 AF 8 THR A 381 LEU A 385 -1 O THR A 381 N ILE A 394 SHEET 3 AF 8 GLN A 447 THR A 452 -1 O ARG A 449 N VAL A 384 SHEET 4 AF 8 ASN A 328 ILE A 334 -1 O ASN A 328 N THR A 452 SHEET 5 AF 8 ILE A 289 ARG A 297 -1 O SER A 294 N ALA A 333 SHEET 6 AF 8 VAL A 262 LYS A 273 -1 O GLU A 267 N THR A 293 SHEET 7 AF 8 THR A 357 ASN A 368 -1 O ARG A 359 N SER A 272 SHEET 8 AF 8 ASN A 409 TYR A 411 -1 O ASN A 409 N ASN A 368 SHEET 1 AG 8 GLN A 389 ILE A 394 0 SHEET 2 AG 8 THR A 381 LEU A 385 -1 O THR A 381 N ILE A 394 SHEET 3 AG 8 GLN A 447 THR A 452 -1 O ARG A 449 N VAL A 384 SHEET 4 AG 8 ASN A 328 ILE A 334 -1 O ASN A 328 N THR A 452 SHEET 5 AG 8 ILE A 289 ARG A 297 -1 O SER A 294 N ALA A 333 SHEET 6 AG 8 VAL A 262 LYS A 273 -1 O GLU A 267 N THR A 293 SHEET 7 AG 8 THR A 357 ASN A 368 -1 O ARG A 359 N SER A 272 SHEET 8 AG 8 ILE A 419 ALA A 420 -1 O ILE A 419 N ILE A 364 SHEET 1 AH 2 ASN A 409 TYR A 411 0 SHEET 2 AH 2 THR A 357 ASN A 368 -1 O TYR A 366 N TYR A 411 SHEET 1 AI 8 GLN A 389 ILE A 394 0 SHEET 2 AI 8 THR A 381 LEU A 385 -1 O THR A 381 N ILE A 394 SHEET 3 AI 8 GLN A 447 THR A 452 -1 O ARG A 449 N VAL A 384 SHEET 4 AI 8 ASN A 328 ILE A 334 -1 O ASN A 328 N THR A 452 SHEET 5 AI 8 ILE A 289 ARG A 297 -1 O SER A 294 N ALA A 333 SHEET 6 AI 8 VAL A 262 LYS A 273 -1 O GLU A 267 N THR A 293 SHEET 7 AI 8 THR A 357 ASN A 368 -1 O ARG A 359 N SER A 272 SHEET 8 AI 8 ILE A 432 ASN A 435 -1 O ILE A 432 N LEU A 360 SHEET 1 AJ 2 ASN A 458 ASN A 463 0 SHEET 2 AJ 2 ARG A 468 ASN A 476 -1 O ARG A 468 N ASN A 463 SHEET 1 AK 4 VAL A 501 ALA A 506 0 SHEET 2 AK 4 THR A 488 PHE A 493 -1 O ALA A 489 N ILE A 505 SHEET 3 AK 4 ASN A 588 ASP A 593 1 O ILE A 589 N ILE A 492 SHEET 4 AK 4 PHE A 550 PHE A 554 -1 O ASP A 551 N ARG A 592 SHEET 1 AL 2 GLN A 541 TYR A 542 0 SHEET 2 AL 2 LYS A 545 ASP A 546 -1 O LYS A 545 N TYR A 542 SHEET 1 AM 2 HIS A 597 TYR A 598 0 SHEET 2 AM 2 ALA A 604 GLY A 606 -1 N VAL A 605 O HIS A 597 SHEET 1 AN 4 VAL A 619 SER A 623 0 SHEET 2 AN 4 GLY A 626 LEU A 629 -1 O GLY A 626 N SER A 623 SHEET 3 AN 4 THR A 674 ASP A 677 -1 O THR A 674 N LEU A 629 SHEET 4 AN 4 SER A 666 LEU A 668 -1 O SER A 667 N PHE A 675 SHEET 1 AO 4 LYS A 653 VAL A 655 0 SHEET 2 AO 4 LEU A 639 GLU A 647 -1 O ILE A 646 N GLU A 654 SHEET 3 AO 4 LYS A 695 THR A 702 -1 O LYS A 695 N GLU A 647 SHEET 4 AO 4 ILE A 724 LYS A 730 -1 O ILE A 724 N ALA A 700 LINK OD1 ASP A 177 CA CA A1736 1555 1555 2.33 LINK OD1 ASP A 179 CA CA A1736 1555 1555 2.39 LINK OD2 ASP A 179 CA CA A1737 1555 1555 2.26 LINK OD1 ASP A 181 CA CA A1736 1555 1555 2.32 LINK OD2 ASP A 181 CA CA A1737 1555 1555 2.35 LINK O ILE A 183 CA CA A1736 1555 1555 2.35 LINK OE2 GLU A 188 CA CA A1736 1555 1555 2.35 LINK OE1 GLU A 188 CA CA A1737 1555 1555 2.42 LINK OE2 GLU A 188 CA CA A1737 1555 1555 2.83 LINK O SER A 222 CA CA A1737 1555 1555 2.29 LINK O LYS A 225 CA CA A1737 1555 1555 2.39 LINK OD2 ASP A 235 CA CA A1737 1555 1555 2.38 LINK CA CA A1736 O HOH A2155 1555 1555 2.30 CISPEP 1 TYR A 411 PRO A 412 0 -7.00 SITE 1 AC1 6 ASP A 177 ASP A 179 ASP A 181 ILE A 183 SITE 2 AC1 6 GLU A 188 HOH A2155 SITE 1 AC2 6 ASP A 179 ASP A 181 GLU A 188 SER A 222 SITE 2 AC2 6 LYS A 225 ASP A 235 SITE 1 AC3 5 HIS A 336 GLU A 443 LYS A 446 TYR A 660 SITE 2 AC3 5 ASP A 661 SITE 1 AC4 7 THR A 380 SER A 382 ASP A 451 THR A 452 SITE 2 AC4 7 ASP A 453 HOH A2305 HOH A2662 CRYST1 84.547 94.714 100.627 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011828 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010558 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009938 0.00000