HEADER TRANSFERASE 18-DEC-15 5FRN TITLE CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN TITLE 2 COMPLEX WITH MAGNESIUM AND THE INSTI XZ419 (COMPOUND 4C) COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PR125POL; COMPND 5 EC: 2.7.7.49,2.7.7.7,3.1.26.4,3.4.23.-,2.7.7.-,3.1.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: UNIPROT KB P14350; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP COMPND 10 *TP*CP*GP*CP*A)-3'; COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: 5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP *AP*CP*A)- COMPND 15 3'; COMPND 16 CHAIN: D; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN SPUMARETROVIRUS; SOURCE 3 ORGANISM_COMMON: SFVCPZ(HU); SOURCE 4 ORGANISM_TAXID: 11963; SOURCE 5 VARIANT: POL; SOURCE 6 GENE: POL; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: PC2; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PSSH6P-PFV-INFL; SOURCE 12 MOL_ID: 2; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 15 ORGANISM_TAXID: 32630; SOURCE 16 MOL_ID: 3; SOURCE 17 SYNTHETIC: YES; SOURCE 18 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 19 ORGANISM_TAXID: 32630 KEYWDS RECOMBINATION, VIRAL PROTEIN/DNA, PROTEIN-DNA COMPLEX, TETRAMER, DNA KEYWDS 2 INTEGRATION, ENDONUCLEASE, METAL-BINDING, MULTIFUNCTIONAL ENZYME, KEYWDS 3 NUCLEASE, NUCLEOTIDYLTRANSFERASE, NUCLEUS, TRANSFERASE, VIRAL KEYWDS 4 NUCLEOPROTEIN, VIRION, DNA- BINDING, ZINC BINDING, HHCC MOTIF, VIRAL KEYWDS 5 PROTEIN, INHIBITOR, DNA-BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.P.MASKELL,V.E.PYE,P.CHEREPANOV REVDAT 7 10-JAN-24 5FRN 1 REMARK REVDAT 6 30-SEP-20 5FRN 1 COMPND SOURCE REMARK DBREF REVDAT 6 2 1 SEQADV LINK ATOM REVDAT 5 10-APR-19 5FRN 1 SOURCE REVDAT 4 06-FEB-19 5FRN 1 REMARK REVDAT 3 30-JAN-19 5FRN 1 REMARK REVDAT 2 27-APR-16 5FRN 1 JRNL REVDAT 1 17-FEB-16 5FRN 0 JRNL AUTH X.Z.ZHAO,S.J.SMITH,D.P.MASKELL,M.METIFIOT,V.E.PYE,K.FESEN, JRNL AUTH 2 C.MARCHAND,Y.POMMIER,P.CHEREPANOV,S.H.HUGHES,T.R.J.BURKE JRNL TITL HIV-1 INTEGRASE STRAND TRANSFER INHIBITORS WITH REDUCED JRNL TITL 2 SUSCEPTIBILITY TO DRUG RESISTANT MUTANT INTEGRASES. JRNL REF ACS CHEM.BIOL. V. 11 1074 2016 JRNL REFN ISSN 1554-8929 JRNL PMID 26808478 JRNL DOI 10.1021/ACSCHEMBIO.5B00948 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 37914 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1899 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 57.7369 - 6.8653 0.99 2765 138 0.1689 0.1676 REMARK 3 2 6.8653 - 5.4506 1.00 2655 129 0.1710 0.1864 REMARK 3 3 5.4506 - 4.7619 1.00 2588 146 0.1484 0.1682 REMARK 3 4 4.7619 - 4.3267 1.00 2590 137 0.1393 0.1629 REMARK 3 5 4.3267 - 4.0167 1.00 2547 153 0.1510 0.1765 REMARK 3 6 4.0167 - 3.7799 1.00 2549 150 0.1728 0.2047 REMARK 3 7 3.7799 - 3.5906 1.00 2581 117 0.1848 0.2266 REMARK 3 8 3.5906 - 3.4344 1.00 2532 140 0.1903 0.2171 REMARK 3 9 3.4344 - 3.3022 1.00 2529 151 0.2103 0.2850 REMARK 3 10 3.3022 - 3.1882 1.00 2564 118 0.2161 0.2083 REMARK 3 11 3.1882 - 3.0885 1.00 2532 127 0.2212 0.2627 REMARK 3 12 3.0885 - 3.0003 1.00 2541 129 0.2424 0.2898 REMARK 3 13 3.0003 - 2.9213 1.00 2558 116 0.2834 0.3337 REMARK 3 14 2.9213 - 2.8500 0.99 2484 148 0.3897 0.3831 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 78.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 5393 REMARK 3 ANGLE : 0.755 7513 REMARK 3 CHIRALITY : 0.041 835 REMARK 3 PLANARITY : 0.005 819 REMARK 3 DIHEDRAL : 15.569 3075 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 8:98) REMARK 3 ORIGIN FOR THE GROUP (A): -70.4448 26.6844 -57.8982 REMARK 3 T TENSOR REMARK 3 T11: 0.4597 T22: 0.5348 REMARK 3 T33: 0.5694 T12: -0.0634 REMARK 3 T13: -0.0836 T23: -0.0974 REMARK 3 L TENSOR REMARK 3 L11: 0.4832 L22: 0.6006 REMARK 3 L33: 0.7729 L12: 0.5190 REMARK 3 L13: -0.0301 L23: 0.3633 REMARK 3 S TENSOR REMARK 3 S11: -0.0250 S12: 0.0245 S13: 0.0954 REMARK 3 S21: -0.1065 S22: -0.2433 S23: 0.1668 REMARK 3 S31: -0.0495 S32: -0.2191 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 99:280) REMARK 3 ORIGIN FOR THE GROUP (A): -35.2097 36.6851 -8.6402 REMARK 3 T TENSOR REMARK 3 T11: 0.4705 T22: 0.4838 REMARK 3 T33: 0.4944 T12: -0.0329 REMARK 3 T13: 0.0569 T23: 0.0270 REMARK 3 L TENSOR REMARK 3 L11: 0.3192 L22: 0.3737 REMARK 3 L33: 1.6435 L12: 0.1436 REMARK 3 L13: 0.4383 L23: 0.2762 REMARK 3 S TENSOR REMARK 3 S11: -0.0574 S12: -0.1187 S13: 0.0069 REMARK 3 S21: 0.0013 S22: 0.0075 S23: 0.0292 REMARK 3 S31: 0.1819 S32: -0.0172 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 281:316) REMARK 3 ORIGIN FOR THE GROUP (A): -47.2269 50.7871 -2.4486 REMARK 3 T TENSOR REMARK 3 T11: 0.6851 T22: 0.7595 REMARK 3 T33: 0.6816 T12: -0.0341 REMARK 3 T13: 0.0166 T23: -0.0444 REMARK 3 L TENSOR REMARK 3 L11: 0.2121 L22: 0.0181 REMARK 3 L33: 0.1686 L12: -0.1026 REMARK 3 L13: -0.1031 L23: 0.3646 REMARK 3 S TENSOR REMARK 3 S11: -0.2728 S12: -0.1980 S13: 0.1096 REMARK 3 S21: -0.2556 S22: 0.0843 S23: 0.2575 REMARK 3 S31: -0.5303 S32: -0.3208 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 317:345) REMARK 3 ORIGIN FOR THE GROUP (A): -52.8613 24.3925 -30.0582 REMARK 3 T TENSOR REMARK 3 T11: 0.6170 T22: 0.6645 REMARK 3 T33: 0.6451 T12: -0.2312 REMARK 3 T13: 0.0741 T23: 0.0288 REMARK 3 L TENSOR REMARK 3 L11: 0.2501 L22: 0.0441 REMARK 3 L33: 0.5841 L12: 0.0419 REMARK 3 L13: -0.0213 L23: -0.3840 REMARK 3 S TENSOR REMARK 3 S11: -0.0654 S12: -0.3046 S13: -0.1885 REMARK 3 S21: -0.1066 S22: 0.1186 S23: 0.0818 REMARK 3 S31: 0.8619 S32: 0.0589 S33: 0.0165 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 346:375) REMARK 3 ORIGIN FOR THE GROUP (A): -55.9823 26.4725 -24.1625 REMARK 3 T TENSOR REMARK 3 T11: 0.7726 T22: 0.5845 REMARK 3 T33: 0.5853 T12: -0.2000 REMARK 3 T13: 0.1033 T23: 0.0608 REMARK 3 L TENSOR REMARK 3 L11: 0.6970 L22: 0.3316 REMARK 3 L33: 0.2954 L12: 0.4860 REMARK 3 L13: 0.0427 L23: 0.2036 REMARK 3 S TENSOR REMARK 3 S11: -0.2836 S12: -0.2790 S13: 0.1203 REMARK 3 S21: 0.0101 S22: -0.0519 S23: 0.0893 REMARK 3 S31: 0.6113 S32: -0.6958 S33: -0.0565 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 116:212) REMARK 3 ORIGIN FOR THE GROUP (A): -19.0628 40.9040 13.3181 REMARK 3 T TENSOR REMARK 3 T11: 0.5200 T22: 0.7281 REMARK 3 T33: 0.5120 T12: 0.0329 REMARK 3 T13: 0.0416 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.8742 L22: 0.5496 REMARK 3 L33: 0.8625 L12: -0.3565 REMARK 3 L13: -0.0662 L23: 0.2857 REMARK 3 S TENSOR REMARK 3 S11: -0.2018 S12: -0.2156 S13: -0.0479 REMARK 3 S21: 0.0687 S22: 0.0742 S23: 0.1294 REMARK 3 S31: -0.0269 S32: 0.3033 S33: 0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 213:277) REMARK 3 ORIGIN FOR THE GROUP (A): -31.9383 32.9405 18.5573 REMARK 3 T TENSOR REMARK 3 T11: 0.6314 T22: 0.7194 REMARK 3 T33: 0.4720 T12: -0.0279 REMARK 3 T13: 0.0805 T23: 0.0340 REMARK 3 L TENSOR REMARK 3 L11: 0.4782 L22: 0.3966 REMARK 3 L33: 0.5158 L12: 0.1463 REMARK 3 L13: -0.2536 L23: -0.3959 REMARK 3 S TENSOR REMARK 3 S11: -0.0561 S12: -0.4936 S13: -0.1877 REMARK 3 S21: 0.3673 S22: 0.0705 S23: 0.2654 REMARK 3 S31: 0.0324 S32: -0.2055 S33: -0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 278:299) REMARK 3 ORIGIN FOR THE GROUP (A): -31.4266 19.0117 27.0349 REMARK 3 T TENSOR REMARK 3 T11: 1.2231 T22: 1.2119 REMARK 3 T33: 1.3894 T12: -0.0999 REMARK 3 T13: -0.0084 T23: 0.1447 REMARK 3 L TENSOR REMARK 3 L11: 0.0086 L22: -0.0378 REMARK 3 L33: -0.0505 L12: 0.0166 REMARK 3 L13: 0.0391 L23: 0.0257 REMARK 3 S TENSOR REMARK 3 S11: 0.1147 S12: -0.2114 S13: 0.5130 REMARK 3 S21: -0.0935 S22: 0.3362 S23: 0.4434 REMARK 3 S31: 0.5750 S32: -0.6562 S33: -0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN C AND RESID 1:4) REMARK 3 ORIGIN FOR THE GROUP (A): -51.2516 32.7682 -13.3817 REMARK 3 T TENSOR REMARK 3 T11: 0.6701 T22: 0.7282 REMARK 3 T33: 0.5494 T12: -0.2409 REMARK 3 T13: 0.0798 T23: 0.1368 REMARK 3 L TENSOR REMARK 3 L11: 0.7907 L22: 0.4945 REMARK 3 L33: 0.0238 L12: -0.6076 REMARK 3 L13: -0.1435 L23: 0.1411 REMARK 3 S TENSOR REMARK 3 S11: 0.0147 S12: -0.8074 S13: 0.5857 REMARK 3 S21: 0.5825 S22: 0.2049 S23: -0.4396 REMARK 3 S31: 0.8607 S32: -0.7647 S33: 0.0081 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN C AND RESID 5:19) REMARK 3 ORIGIN FOR THE GROUP (A): -42.0846 66.5810 -14.0902 REMARK 3 T TENSOR REMARK 3 T11: 0.6090 T22: 0.4532 REMARK 3 T33: 0.5659 T12: -0.0228 REMARK 3 T13: -0.0425 T23: -0.0332 REMARK 3 L TENSOR REMARK 3 L11: 0.2267 L22: 0.2825 REMARK 3 L33: 0.5075 L12: 0.6595 REMARK 3 L13: -0.2601 L23: -0.3902 REMARK 3 S TENSOR REMARK 3 S11: 0.1410 S12: -0.0005 S13: -0.0105 REMARK 3 S21: -0.0436 S22: -0.3113 S23: 0.0718 REMARK 3 S31: -0.3875 S32: -0.2826 S33: 0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN D AND RESID 1:7) REMARK 3 ORIGIN FOR THE GROUP (A): -44.1687 80.5305 -13.0136 REMARK 3 T TENSOR REMARK 3 T11: 0.9315 T22: 0.5629 REMARK 3 T33: 0.7887 T12: -0.0446 REMARK 3 T13: 0.1403 T23: -0.0852 REMARK 3 L TENSOR REMARK 3 L11: 0.0096 L22: 0.0858 REMARK 3 L33: 0.0842 L12: -0.0225 REMARK 3 L13: 0.0412 L23: -0.2542 REMARK 3 S TENSOR REMARK 3 S11: 0.1129 S12: 0.0014 S13: -0.3180 REMARK 3 S21: 0.2858 S22: -0.4211 S23: 0.0609 REMARK 3 S31: 0.3553 S32: -0.2403 S33: 0.0001 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN D AND RESID 8:17) REMARK 3 ORIGIN FOR THE GROUP (A): -40.7911 52.3448 -19.6721 REMARK 3 T TENSOR REMARK 3 T11: 0.6374 T22: 0.5839 REMARK 3 T33: 0.7061 T12: -0.0549 REMARK 3 T13: 0.0231 T23: -0.0540 REMARK 3 L TENSOR REMARK 3 L11: 0.3494 L22: 0.0348 REMARK 3 L33: -0.1377 L12: -0.0500 REMARK 3 L13: 0.0601 L23: -0.0905 REMARK 3 S TENSOR REMARK 3 S11: 0.1711 S12: 0.3930 S13: 0.1047 REMARK 3 S21: -0.0056 S22: -0.7042 S23: -0.1044 REMARK 3 S31: 0.0367 S32: -0.1642 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FRN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1290065336. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37972 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 57.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.100 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.89000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 4BDZ REMARK 200 REMARK 200 REMARK: PROTEIN AND DNA COMPONENTS USED FROM 4BDZ REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.35 M AMMONIUM SULFATE, 25% (V/V) REMARK 280 GLYCEROL, 4.8% (V/V) 1,6-HEXANEDIOL, 50 MM MES-NAOH, 1MM EDTA, REMARK 280 PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.90000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 79.94500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 79.94500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.95000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 79.94500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 79.94500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 92.85000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 79.94500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 79.94500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 30.95000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 79.94500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 79.94500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 92.85000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 61.90000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 30930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -346.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -61.90000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 PRO A -1 REMARK 465 GLY A 0 REMARK 465 CYS A 1 REMARK 465 ASN A 2 REMARK 465 THR A 3 REMARK 465 LYS A 4 REMARK 465 LYS A 5 REMARK 465 PRO A 6 REMARK 465 ASN A 7 REMARK 465 LEU A 8 REMARK 465 ASN A 376 REMARK 465 GLY A 377 REMARK 465 THR A 378 REMARK 465 THR A 379 REMARK 465 ASN A 380 REMARK 465 ASP A 381 REMARK 465 THR A 382 REMARK 465 ALA A 383 REMARK 465 THR A 384 REMARK 465 MET A 385 REMARK 465 ASP A 386 REMARK 465 HIS A 387 REMARK 465 LEU A 388 REMARK 465 GLU A 389 REMARK 465 LYS A 390 REMARK 465 ASN A 391 REMARK 465 GLU A 392 REMARK 465 GLY B -2 REMARK 465 PRO B -1 REMARK 465 GLY B 0 REMARK 465 CYS B 1 REMARK 465 ASN B 2 REMARK 465 THR B 3 REMARK 465 LYS B 4 REMARK 465 LYS B 5 REMARK 465 PRO B 6 REMARK 465 ASN B 7 REMARK 465 LEU B 8 REMARK 465 ASP B 9 REMARK 465 ALA B 10 REMARK 465 GLU B 11 REMARK 465 LEU B 12 REMARK 465 ASP B 13 REMARK 465 GLN B 14 REMARK 465 LEU B 15 REMARK 465 LEU B 16 REMARK 465 GLN B 17 REMARK 465 GLY B 18 REMARK 465 HIS B 19 REMARK 465 TYR B 20 REMARK 465 ILE B 21 REMARK 465 LYS B 22 REMARK 465 GLY B 23 REMARK 465 TYR B 24 REMARK 465 PRO B 25 REMARK 465 LYS B 26 REMARK 465 GLN B 27 REMARK 465 TYR B 28 REMARK 465 THR B 29 REMARK 465 TYR B 30 REMARK 465 PHE B 31 REMARK 465 LEU B 32 REMARK 465 GLU B 33 REMARK 465 ASP B 34 REMARK 465 GLY B 35 REMARK 465 LYS B 36 REMARK 465 VAL B 37 REMARK 465 LYS B 38 REMARK 465 VAL B 39 REMARK 465 SER B 40 REMARK 465 ARG B 41 REMARK 465 PRO B 42 REMARK 465 GLU B 43 REMARK 465 GLY B 44 REMARK 465 VAL B 45 REMARK 465 LYS B 46 REMARK 465 ILE B 47 REMARK 465 ILE B 48 REMARK 465 PRO B 49 REMARK 465 PRO B 50 REMARK 465 GLN B 51 REMARK 465 SER B 52 REMARK 465 ASP B 53 REMARK 465 ARG B 54 REMARK 465 GLN B 55 REMARK 465 LYS B 56 REMARK 465 ILE B 57 REMARK 465 VAL B 58 REMARK 465 LEU B 59 REMARK 465 GLN B 60 REMARK 465 ALA B 61 REMARK 465 HIS B 62 REMARK 465 ASN B 63 REMARK 465 LEU B 64 REMARK 465 ALA B 65 REMARK 465 HIS B 66 REMARK 465 THR B 67 REMARK 465 GLY B 68 REMARK 465 ARG B 69 REMARK 465 GLU B 70 REMARK 465 ALA B 71 REMARK 465 THR B 72 REMARK 465 LEU B 73 REMARK 465 LEU B 74 REMARK 465 LYS B 75 REMARK 465 ILE B 76 REMARK 465 ALA B 77 REMARK 465 ASN B 78 REMARK 465 LEU B 79 REMARK 465 TYR B 80 REMARK 465 TRP B 81 REMARK 465 TRP B 82 REMARK 465 PRO B 83 REMARK 465 ASN B 84 REMARK 465 MET B 85 REMARK 465 ARG B 86 REMARK 465 LYS B 87 REMARK 465 ASP B 88 REMARK 465 VAL B 89 REMARK 465 VAL B 90 REMARK 465 LYS B 91 REMARK 465 GLN B 92 REMARK 465 LEU B 93 REMARK 465 GLY B 94 REMARK 465 ARG B 95 REMARK 465 CYS B 96 REMARK 465 GLN B 97 REMARK 465 GLN B 98 REMARK 465 CYS B 99 REMARK 465 LEU B 100 REMARK 465 ILE B 101 REMARK 465 THR B 102 REMARK 465 ASN B 103 REMARK 465 ALA B 104 REMARK 465 SER B 105 REMARK 465 ASN B 106 REMARK 465 LYS B 107 REMARK 465 ALA B 108 REMARK 465 SER B 109 REMARK 465 GLY B 110 REMARK 465 PRO B 111 REMARK 465 ILE B 112 REMARK 465 LEU B 113 REMARK 465 ARG B 114 REMARK 465 PRO B 115 REMARK 465 ARG B 299 REMARK 465 THR B 300 REMARK 465 SER B 301 REMARK 465 LEU B 302 REMARK 465 TYR B 303 REMARK 465 HIS B 304 REMARK 465 PRO B 305 REMARK 465 SER B 306 REMARK 465 THR B 307 REMARK 465 PRO B 308 REMARK 465 PRO B 309 REMARK 465 ALA B 310 REMARK 465 SER B 311 REMARK 465 SER B 312 REMARK 465 ARG B 313 REMARK 465 SER B 314 REMARK 465 TRP B 315 REMARK 465 SER B 316 REMARK 465 PRO B 317 REMARK 465 VAL B 318 REMARK 465 VAL B 319 REMARK 465 GLY B 320 REMARK 465 GLN B 321 REMARK 465 LEU B 322 REMARK 465 VAL B 323 REMARK 465 GLN B 324 REMARK 465 GLU B 325 REMARK 465 ARG B 326 REMARK 465 VAL B 327 REMARK 465 ALA B 328 REMARK 465 ARG B 329 REMARK 465 PRO B 330 REMARK 465 ALA B 331 REMARK 465 SER B 332 REMARK 465 LEU B 333 REMARK 465 ARG B 334 REMARK 465 PRO B 335 REMARK 465 ARG B 336 REMARK 465 TRP B 337 REMARK 465 HIS B 338 REMARK 465 LYS B 339 REMARK 465 PRO B 340 REMARK 465 SER B 341 REMARK 465 THR B 342 REMARK 465 VAL B 343 REMARK 465 LEU B 344 REMARK 465 LYS B 345 REMARK 465 VAL B 346 REMARK 465 LEU B 347 REMARK 465 ASN B 348 REMARK 465 PRO B 349 REMARK 465 ARG B 350 REMARK 465 THR B 351 REMARK 465 VAL B 352 REMARK 465 VAL B 353 REMARK 465 ILE B 354 REMARK 465 LEU B 355 REMARK 465 ASP B 356 REMARK 465 HIS B 357 REMARK 465 LEU B 358 REMARK 465 GLY B 359 REMARK 465 ASN B 360 REMARK 465 ASN B 361 REMARK 465 ARG B 362 REMARK 465 THR B 363 REMARK 465 VAL B 364 REMARK 465 SER B 365 REMARK 465 ILE B 366 REMARK 465 ASP B 367 REMARK 465 ASN B 368 REMARK 465 LEU B 369 REMARK 465 LYS B 370 REMARK 465 PRO B 371 REMARK 465 THR B 372 REMARK 465 SER B 373 REMARK 465 HIS B 374 REMARK 465 GLN B 375 REMARK 465 ASN B 376 REMARK 465 GLY B 377 REMARK 465 THR B 378 REMARK 465 THR B 379 REMARK 465 ASN B 380 REMARK 465 ASP B 381 REMARK 465 THR B 382 REMARK 465 ALA B 383 REMARK 465 THR B 384 REMARK 465 MET B 385 REMARK 465 ASP B 386 REMARK 465 HIS B 387 REMARK 465 LEU B 388 REMARK 465 GLU B 389 REMARK 465 LYS B 390 REMARK 465 ASN B 391 REMARK 465 GLU B 392 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 91 CG CD CE NZ REMARK 470 ARG A 329 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 197 CG CD OE1 OE2 REMARK 470 LYS B 262 CG CD CE NZ REMARK 470 LEU B 292 CG CD1 CD2 REMARK 470 LEU B 294 CG CD1 CD2 REMARK 470 LEU B 295 CG CD1 CD2 REMARK 470 GLN B 296 CG CD OE1 NE2 REMARK 470 ILE B 298 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 174 0.24 -68.48 REMARK 500 GLN A 186 36.82 -88.13 REMARK 500 HIS A 213 76.01 -158.88 REMARK 500 ARG A 329 72.25 -117.75 REMARK 500 GLN B 186 39.11 -81.23 REMARK 500 SER B 216 -90.71 -118.43 REMARK 500 PHE B 278 77.26 -111.34 REMARK 500 LEU B 284 -15.07 72.80 REMARK 500 GLU B 297 -97.96 -82.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 393 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 62 NE2 REMARK 620 2 HIS A 66 ND1 106.8 REMARK 620 3 CYS A 96 SG 107.1 110.0 REMARK 620 4 CYS A 99 SG 101.8 118.2 112.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 394 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 128 OD1 REMARK 620 2 ASP A 185 OD2 79.4 REMARK 620 3 HOH A3016 O 90.0 92.1 REMARK 620 4 HOH A3017 O 83.1 160.8 79.9 REMARK 620 5 QUW D1018 NAS 172.3 104.3 96.6 94.0 REMARK 620 6 QUW D1018 OAE 86.8 94.4 172.1 92.6 86.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 395 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 128 OD2 REMARK 620 2 GLU A 221 OE1 95.5 REMARK 620 3 GLU A 221 OE2 80.5 60.5 REMARK 620 4 HOH A3018 O 83.3 105.7 157.3 REMARK 620 5 QUW D1018 OAE 81.2 145.2 84.9 108.2 REMARK 620 6 QUW D1018 OAC 152.7 89.7 78.9 121.0 79.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 393 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 394 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 395 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 393 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE QUW D 1018 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1376 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1299 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1377 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 1020 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1300 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1378 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FRM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN REMARK 900 COMPLEX WITH MAGNESIUM AND THE INSTI XZ384 (COMPOUND 4A) REMARK 900 RELATED ID: 5FRO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN REMARK 900 COMPLEX WITH MAGNESIUM AND THE INSTI XZ446 (COMPOUND 4F) REMARK 999 REMARK 999 SEQUENCE REMARK 999 SYNTHETIC DBREF 5FRN A 3 392 UNP P14350 POL_FOAMV 754 1143 DBREF 5FRN B 3 392 UNP P14350 POL_FOAMV 754 1143 DBREF 5FRN C 1 19 PDB 5FRN 5FRN 1 19 DBREF 5FRN D 1 17 PDB 5FRN 5FRN 1 17 SEQADV 5FRN GLY A -2 UNP P14350 EXPRESSION TAG SEQADV 5FRN PRO A -1 UNP P14350 EXPRESSION TAG SEQADV 5FRN GLY A 0 UNP P14350 EXPRESSION TAG SEQADV 5FRN CYS A 1 UNP P14350 EXPRESSION TAG SEQADV 5FRN ASN A 2 UNP P14350 EXPRESSION TAG SEQADV 5FRN SER A 217 UNP P14350 GLY 968 VARIANT SEQADV 5FRN GLY A 218 UNP P14350 SER 969 VARIANT SEQADV 5FRN GLY B -2 UNP P14350 EXPRESSION TAG SEQADV 5FRN PRO B -1 UNP P14350 EXPRESSION TAG SEQADV 5FRN GLY B 0 UNP P14350 EXPRESSION TAG SEQADV 5FRN CYS B 1 UNP P14350 EXPRESSION TAG SEQADV 5FRN ASN B 2 UNP P14350 EXPRESSION TAG SEQADV 5FRN SER B 217 UNP P14350 GLY 968 VARIANT SEQADV 5FRN GLY B 218 UNP P14350 SER 969 VARIANT SEQRES 1 A 395 GLY PRO GLY CYS ASN THR LYS LYS PRO ASN LEU ASP ALA SEQRES 2 A 395 GLU LEU ASP GLN LEU LEU GLN GLY HIS TYR ILE LYS GLY SEQRES 3 A 395 TYR PRO LYS GLN TYR THR TYR PHE LEU GLU ASP GLY LYS SEQRES 4 A 395 VAL LYS VAL SER ARG PRO GLU GLY VAL LYS ILE ILE PRO SEQRES 5 A 395 PRO GLN SER ASP ARG GLN LYS ILE VAL LEU GLN ALA HIS SEQRES 6 A 395 ASN LEU ALA HIS THR GLY ARG GLU ALA THR LEU LEU LYS SEQRES 7 A 395 ILE ALA ASN LEU TYR TRP TRP PRO ASN MET ARG LYS ASP SEQRES 8 A 395 VAL VAL LYS GLN LEU GLY ARG CYS GLN GLN CYS LEU ILE SEQRES 9 A 395 THR ASN ALA SER ASN LYS ALA SER GLY PRO ILE LEU ARG SEQRES 10 A 395 PRO ASP ARG PRO GLN LYS PRO PHE ASP LYS PHE PHE ILE SEQRES 11 A 395 ASP TYR ILE GLY PRO LEU PRO PRO SER GLN GLY TYR LEU SEQRES 12 A 395 TYR VAL LEU VAL VAL VAL ASP GLY MET THR GLY PHE THR SEQRES 13 A 395 TRP LEU TYR PRO THR LYS ALA PRO SER THR SER ALA THR SEQRES 14 A 395 VAL LYS SER LEU ASN VAL LEU THR SER ILE ALA ILE PRO SEQRES 15 A 395 LYS VAL ILE HIS SER ASP GLN GLY ALA ALA PHE THR SER SEQRES 16 A 395 SER THR PHE ALA GLU TRP ALA LYS GLU ARG GLY ILE HIS SEQRES 17 A 395 LEU GLU PHE SER THR PRO TYR HIS PRO GLN SER SER GLY SEQRES 18 A 395 LYS VAL GLU ARG LYS ASN SER ASP ILE LYS ARG LEU LEU SEQRES 19 A 395 THR LYS LEU LEU VAL GLY ARG PRO THR LYS TRP TYR ASP SEQRES 20 A 395 LEU LEU PRO VAL VAL GLN LEU ALA LEU ASN ASN THR TYR SEQRES 21 A 395 SER PRO VAL LEU LYS TYR THR PRO HIS GLN LEU LEU PHE SEQRES 22 A 395 GLY ILE ASP SER ASN THR PRO PHE ALA ASN GLN ASP THR SEQRES 23 A 395 LEU ASP LEU THR ARG GLU GLU GLU LEU SER LEU LEU GLN SEQRES 24 A 395 GLU ILE ARG THR SER LEU TYR HIS PRO SER THR PRO PRO SEQRES 25 A 395 ALA SER SER ARG SER TRP SER PRO VAL VAL GLY GLN LEU SEQRES 26 A 395 VAL GLN GLU ARG VAL ALA ARG PRO ALA SER LEU ARG PRO SEQRES 27 A 395 ARG TRP HIS LYS PRO SER THR VAL LEU LYS VAL LEU ASN SEQRES 28 A 395 PRO ARG THR VAL VAL ILE LEU ASP HIS LEU GLY ASN ASN SEQRES 29 A 395 ARG THR VAL SER ILE ASP ASN LEU LYS PRO THR SER HIS SEQRES 30 A 395 GLN ASN GLY THR THR ASN ASP THR ALA THR MET ASP HIS SEQRES 31 A 395 LEU GLU LYS ASN GLU SEQRES 1 B 395 GLY PRO GLY CYS ASN THR LYS LYS PRO ASN LEU ASP ALA SEQRES 2 B 395 GLU LEU ASP GLN LEU LEU GLN GLY HIS TYR ILE LYS GLY SEQRES 3 B 395 TYR PRO LYS GLN TYR THR TYR PHE LEU GLU ASP GLY LYS SEQRES 4 B 395 VAL LYS VAL SER ARG PRO GLU GLY VAL LYS ILE ILE PRO SEQRES 5 B 395 PRO GLN SER ASP ARG GLN LYS ILE VAL LEU GLN ALA HIS SEQRES 6 B 395 ASN LEU ALA HIS THR GLY ARG GLU ALA THR LEU LEU LYS SEQRES 7 B 395 ILE ALA ASN LEU TYR TRP TRP PRO ASN MET ARG LYS ASP SEQRES 8 B 395 VAL VAL LYS GLN LEU GLY ARG CYS GLN GLN CYS LEU ILE SEQRES 9 B 395 THR ASN ALA SER ASN LYS ALA SER GLY PRO ILE LEU ARG SEQRES 10 B 395 PRO ASP ARG PRO GLN LYS PRO PHE ASP LYS PHE PHE ILE SEQRES 11 B 395 ASP TYR ILE GLY PRO LEU PRO PRO SER GLN GLY TYR LEU SEQRES 12 B 395 TYR VAL LEU VAL VAL VAL ASP GLY MET THR GLY PHE THR SEQRES 13 B 395 TRP LEU TYR PRO THR LYS ALA PRO SER THR SER ALA THR SEQRES 14 B 395 VAL LYS SER LEU ASN VAL LEU THR SER ILE ALA ILE PRO SEQRES 15 B 395 LYS VAL ILE HIS SER ASP GLN GLY ALA ALA PHE THR SER SEQRES 16 B 395 SER THR PHE ALA GLU TRP ALA LYS GLU ARG GLY ILE HIS SEQRES 17 B 395 LEU GLU PHE SER THR PRO TYR HIS PRO GLN SER SER GLY SEQRES 18 B 395 LYS VAL GLU ARG LYS ASN SER ASP ILE LYS ARG LEU LEU SEQRES 19 B 395 THR LYS LEU LEU VAL GLY ARG PRO THR LYS TRP TYR ASP SEQRES 20 B 395 LEU LEU PRO VAL VAL GLN LEU ALA LEU ASN ASN THR TYR SEQRES 21 B 395 SER PRO VAL LEU LYS TYR THR PRO HIS GLN LEU LEU PHE SEQRES 22 B 395 GLY ILE ASP SER ASN THR PRO PHE ALA ASN GLN ASP THR SEQRES 23 B 395 LEU ASP LEU THR ARG GLU GLU GLU LEU SER LEU LEU GLN SEQRES 24 B 395 GLU ILE ARG THR SER LEU TYR HIS PRO SER THR PRO PRO SEQRES 25 B 395 ALA SER SER ARG SER TRP SER PRO VAL VAL GLY GLN LEU SEQRES 26 B 395 VAL GLN GLU ARG VAL ALA ARG PRO ALA SER LEU ARG PRO SEQRES 27 B 395 ARG TRP HIS LYS PRO SER THR VAL LEU LYS VAL LEU ASN SEQRES 28 B 395 PRO ARG THR VAL VAL ILE LEU ASP HIS LEU GLY ASN ASN SEQRES 29 B 395 ARG THR VAL SER ILE ASP ASN LEU LYS PRO THR SER HIS SEQRES 30 B 395 GLN ASN GLY THR THR ASN ASP THR ALA THR MET ASP HIS SEQRES 31 B 395 LEU GLU LYS ASN GLU SEQRES 1 C 19 DA DT DT DG DT DC DA DT DG DG DA DA DT SEQRES 2 C 19 DT DT DC DG DC DA SEQRES 1 D 17 DT DG DC DG DA DA DA DT DT DC DC DA DT SEQRES 2 D 17 DG DA DC DA HET ZN A 393 1 HET MG A 394 1 HET MG A 395 1 HET GOL A1376 6 HET GOL A1377 6 HET GOL A1378 6 HET SO4 A2001 5 HET SO4 A2002 5 HET SO4 A2003 5 HET SO4 A2004 5 HET SO4 B 393 5 HET GOL B1299 6 HET GOL B1300 6 HET GOL C1020 6 HET QUW D1018 31 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM QUW 4-AZANYL-N-[[2,4-BIS(FLUORANYL)PHENYL]METHYL]-1- HETNAM 2 QUW OXIDANYL-2-OXIDANYLIDENE-6-(5-OXIDANYLPENTYL)-1,8- HETNAM 3 QUW NAPHTHYRIDINE-3-CARBOXAMIDE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 ZN ZN 2+ FORMUL 6 MG 2(MG 2+) FORMUL 8 GOL 6(C3 H8 O3) FORMUL 11 SO4 5(O4 S 2-) FORMUL 19 QUW C21 H22 F2 N4 O4 FORMUL 20 HOH *91(H2 O) HELIX 1 1 ASP A 9 GLY A 18 1 10 HELIX 2 2 PRO A 50 SER A 52 5 3 HELIX 3 3 ASP A 53 LEU A 64 1 12 HELIX 4 4 GLY A 68 TYR A 80 1 13 HELIX 5 5 ASN A 84 GLY A 94 1 11 HELIX 6 6 CYS A 96 ASN A 103 1 8 HELIX 7 7 SER A 162 THR A 174 1 13 HELIX 8 8 GLY A 187 SER A 192 1 6 HELIX 9 9 SER A 192 GLU A 201 1 10 HELIX 10 10 HIS A 213 SER A 216 5 4 HELIX 11 11 SER A 217 LEU A 235 1 19 HELIX 12 12 TRP A 242 ASP A 244 5 3 HELIX 13 13 LEU A 245 ASN A 255 1 11 HELIX 14 14 THR A 264 GLY A 271 1 8 HELIX 15 15 THR A 287 SER A 301 1 15 HELIX 16 16 SER B 162 THR B 174 1 13 HELIX 17 17 GLY B 187 SER B 192 1 6 HELIX 18 18 SER B 192 ARG B 202 1 11 HELIX 19 19 SER B 217 VAL B 236 1 20 HELIX 20 20 LEU B 245 ASN B 255 1 11 HELIX 21 21 THR B 264 GLY B 271 1 8 HELIX 22 22 THR B 287 LEU B 295 1 9 SHEET 1 AA 3 TYR A 30 GLU A 33 0 SHEET 2 AA 3 LYS A 36 ARG A 41 -1 O LYS A 36 N GLU A 33 SHEET 3 AA 3 GLY A 44 ILE A 47 -1 O GLY A 44 N ARG A 41 SHEET 1 AB 2 ALA A 108 SER A 109 0 SHEET 2 AB 2 SER A 314 TRP A 315 1 N TRP A 315 O ALA A 108 SHEET 1 AC 5 THR A 153 THR A 158 0 SHEET 2 AC 5 TYR A 141 ASP A 147 -1 O TYR A 141 N THR A 158 SHEET 3 AC 5 LYS A 124 ILE A 130 -1 O PHE A 126 N VAL A 146 SHEET 4 AC 5 VAL A 181 SER A 184 1 O VAL A 181 N PHE A 125 SHEET 5 AC 5 HIS A 205 PHE A 208 1 O HIS A 205 N ILE A 182 SHEET 1 AD 5 ASN A 361 SER A 365 0 SHEET 2 AD 5 THR A 351 LEU A 355 -1 O VAL A 352 N VAL A 364 SHEET 3 AD 5 SER A 341 ASN A 348 -1 O THR A 342 N LEU A 355 SHEET 4 AD 5 LEU A 322 GLU A 325 -1 O VAL A 323 N SER A 341 SHEET 5 AD 5 LEU A 369 PRO A 371 -1 O LYS A 370 N GLN A 324 SHEET 1 BA 5 THR B 153 THR B 158 0 SHEET 2 BA 5 TYR B 141 ASP B 147 -1 O TYR B 141 N THR B 158 SHEET 3 BA 5 LYS B 124 ILE B 130 -1 O PHE B 126 N VAL B 146 SHEET 4 BA 5 VAL B 181 SER B 184 1 O VAL B 181 N PHE B 125 SHEET 5 BA 5 HIS B 205 PHE B 208 1 O HIS B 205 N ILE B 182 LINK NE2 HIS A 62 ZN ZN A 393 1555 1555 2.01 LINK ND1 HIS A 66 ZN ZN A 393 1555 1555 2.02 LINK SG CYS A 96 ZN ZN A 393 1555 1555 2.23 LINK SG CYS A 99 ZN ZN A 393 1555 1555 2.24 LINK OD1 ASP A 128 MG MG A 394 1555 1555 2.15 LINK OD2 ASP A 128 MG MG A 395 1555 1555 2.14 LINK OD2 ASP A 185 MG MG A 394 1555 1555 2.30 LINK OE1 GLU A 221 MG MG A 395 1555 1555 2.18 LINK OE2 GLU A 221 MG MG A 395 1555 1555 2.17 LINK MG MG A 394 O HOH A3016 1555 1555 2.07 LINK MG MG A 394 O HOH A3017 1555 1555 2.04 LINK MG MG A 394 NAS QUW D1018 1555 1555 2.04 LINK MG MG A 394 OAE QUW D1018 1555 1555 1.93 LINK MG MG A 395 O HOH A3018 1555 1555 2.01 LINK MG MG A 395 OAE QUW D1018 1555 1555 2.13 LINK MG MG A 395 OAC QUW D1018 1555 1555 1.93 CISPEP 1 GLY A 131 PRO A 132 0 5.21 CISPEP 2 GLY B 131 PRO B 132 0 0.69 SITE 1 AC1 4 HIS A 62 HIS A 66 CYS A 96 CYS A 99 SITE 1 AC2 5 ASP A 128 ASP A 185 HOH A3016 HOH A3017 SITE 2 AC2 5 QUW D1018 SITE 1 AC3 4 ASP A 128 GLU A 221 HOH A3018 QUW D1018 SITE 1 AC4 5 LYS B 219 ARG B 222 SER B 258 PRO B 259 SITE 2 AC4 5 VAL B 260 SITE 1 AC5 15 ASP A 128 ASP A 185 GLN A 186 PRO A 211 SITE 2 AC5 15 TYR A 212 PRO A 214 GLN A 215 GLU A 221 SITE 3 AC5 15 MG A 394 MG A 395 HOH A3016 HOH A3017 SITE 4 AC5 15 DG C 4 DC D 16 DA D 17 SITE 1 AC6 3 SER A 136 GLN A 137 LYS A 241 SITE 1 AC7 3 GLY A 187 ALA A 188 DA D 17 SITE 1 AC8 5 LYS A 228 SER A 332 LEU A 333 ARG A 336 SITE 2 AC8 5 HOH A3061 SITE 1 AC9 3 HIS A 338 LYS A 339 HIS A 357 SITE 1 BC1 4 SER A 162 THR A 163 SER A 164 HOH A3024 SITE 1 BC2 5 GLN A 296 TYR B 263 GLN B 267 GLY B 271 SITE 2 BC2 5 ASP B 273 SITE 1 BC3 2 ASP A 116 DT C 3 SITE 1 BC4 6 TYR A 303 GOL A1378 DC C 6 DA C 7 SITE 2 BC4 6 DT C 8 DC D 11 SITE 1 BC5 5 SER A 175 LEU B 155 TYR B 243 PRO B 247 SITE 2 BC5 5 GLN B 250 SITE 1 BC6 6 ARG A 114 TYR A 303 PRO A 305 HOH A3066 SITE 2 BC6 6 DC C 6 GOL C1020 CRYST1 159.890 159.890 123.800 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006254 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006254 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008078 0.00000