HEADER VIRAL PROTEIN 05-JAN-16 5FSG TITLE STRUCTURE OF THE HANTAVIRUS NUCLEOPROTEIN PROVIDES INSIGHTS INTO THE TITLE 2 MECHANISM OF RNA ENCAPSIDATION AND A TEMPLATE FOR DRUG DESIGN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALTOSE-BINDING PERIPLASMIC PROTEIN, HANTAVIRUS COMPND 3 NUCLEOPROTEIN; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: MBP, MMBP, MALTODEXTRIN-BINDING PROTEIN, NUCLEOCAPSID COMPND 6 PROTEIN, PROTEIN N, HANTAVIRUS NUCLEOPROTEIN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HANTAAN VIRUS; SOURCE 3 ORGANISM_TAXID: 11602; SOURCE 4 STRAIN: 76-118; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET21B KEYWDS VIRAL PROTEIN, NUCLEOPROTEIN, NUCLEOCAPSID, VIRUS, HANTAVIRUS, RNA, KEYWDS 2 ENCAPSIDATION, KOREAN HEMORRHAGIC FEVER VIRUS EXPDTA X-RAY DIFFRACTION AUTHOR D.OLAL,O.DAUMKE REVDAT 4 10-JAN-24 5FSG 1 HETSYN REVDAT 3 29-JUL-20 5FSG 1 COMPND REMARK HET HETNAM REVDAT 3 2 1 FORMUL LINK SITE ATOM REVDAT 2 23-OCT-19 5FSG 1 LINK ATOM REVDAT 1 06-APR-16 5FSG 0 JRNL AUTH D.OLAL,O.DAUMKE JRNL TITL STRUCTURE OF THE HANTAVIRUS NUCLEOPROTEIN PROVIDES INSIGHTS JRNL TITL 2 INTO THE MECHANISM OF RNA ENCAPSIDATION. JRNL REF CELL REP. V. 14 2092 2016 JRNL REFN ESSN 2211-1247 JRNL PMID 26923588 JRNL DOI 10.1016/J.CELREP.2016.02.005 REMARK 2 REMARK 2 RESOLUTION. 3.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.310 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 25094 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.291 REMARK 3 R VALUE (WORKING SET) : 0.290 REMARK 3 FREE R VALUE : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1259 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.8104 - 6.6697 1.00 2647 148 0.2334 0.2483 REMARK 3 2 6.6697 - 5.2961 1.00 2658 138 0.2802 0.2283 REMARK 3 3 5.2961 - 4.6273 1.00 2655 139 0.2487 0.2953 REMARK 3 4 4.6273 - 4.2045 1.00 2666 137 0.2671 0.2661 REMARK 3 5 4.2045 - 3.9033 1.00 2649 140 0.3090 0.3146 REMARK 3 6 3.9033 - 3.6732 1.00 2655 139 0.3396 0.3238 REMARK 3 7 3.6732 - 3.4893 1.00 2659 138 0.3638 0.3734 REMARK 3 8 3.4893 - 3.3375 1.00 2654 142 0.3707 0.4222 REMARK 3 9 3.3375 - 3.2090 0.97 2592 138 0.4194 0.4792 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.580 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 81.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 81.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5263 REMARK 3 ANGLE : 0.896 7145 REMARK 3 CHIRALITY : 0.040 808 REMARK 3 PLANARITY : 0.005 911 REMARK 3 DIHEDRAL : 12.244 1911 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -372 THROUGH -330 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7840 20.1668 -39.1133 REMARK 3 T TENSOR REMARK 3 T11: 0.5690 T22: 0.6886 REMARK 3 T33: 0.7189 T12: 0.0925 REMARK 3 T13: 0.0595 T23: 0.1510 REMARK 3 L TENSOR REMARK 3 L11: 1.9823 L22: 3.8300 REMARK 3 L33: 1.6563 L12: -2.4041 REMARK 3 L13: -0.5977 L23: 0.0190 REMARK 3 S TENSOR REMARK 3 S11: 0.4248 S12: 0.3743 S13: -0.4557 REMARK 3 S21: -0.8461 S22: -0.5818 S23: 0.0429 REMARK 3 S31: -0.1517 S32: 0.2682 S33: 0.1453 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -329 THROUGH -127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5015 19.4385 -19.4396 REMARK 3 T TENSOR REMARK 3 T11: 0.5429 T22: 0.4123 REMARK 3 T33: 0.3834 T12: -0.0488 REMARK 3 T13: -0.0892 T23: 0.0149 REMARK 3 L TENSOR REMARK 3 L11: 5.1811 L22: 5.3503 REMARK 3 L33: 2.7460 L12: -2.0014 REMARK 3 L13: -0.9303 L23: -0.6032 REMARK 3 S TENSOR REMARK 3 S11: -0.3408 S12: -0.1242 S13: 0.4595 REMARK 3 S21: 0.4693 S22: 0.0215 S23: -0.3189 REMARK 3 S31: -0.1400 S32: 0.1379 S33: 0.3463 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -126 THROUGH 0 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7775 18.2992 -19.9795 REMARK 3 T TENSOR REMARK 3 T11: 0.5043 T22: 0.4493 REMARK 3 T33: 0.4891 T12: -0.0075 REMARK 3 T13: 0.0318 T23: 0.0336 REMARK 3 L TENSOR REMARK 3 L11: 2.7883 L22: 5.7039 REMARK 3 L33: 1.8644 L12: -1.2049 REMARK 3 L13: 1.2303 L23: -0.7299 REMARK 3 S TENSOR REMARK 3 S11: -0.2663 S12: -0.0026 S13: 0.2668 REMARK 3 S21: 0.3888 S22: 0.0081 S23: -0.4394 REMARK 3 S31: -0.1455 S32: 0.0951 S33: 0.1300 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 113 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.9170 -13.8144 -25.7838 REMARK 3 T TENSOR REMARK 3 T11: 0.7527 T22: 0.8426 REMARK 3 T33: 0.6473 T12: 0.0666 REMARK 3 T13: 0.0371 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 2.5972 L22: 3.4665 REMARK 3 L33: 3.0584 L12: -0.2356 REMARK 3 L13: 1.9294 L23: 1.0327 REMARK 3 S TENSOR REMARK 3 S11: -0.2365 S12: 0.8227 S13: 1.1360 REMARK 3 S21: -0.4361 S22: 0.2917 S23: 0.7357 REMARK 3 S31: -0.0816 S32: 0.9632 S33: -0.1519 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 180 THROUGH 241 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.4856 -25.1102 -15.9716 REMARK 3 T TENSOR REMARK 3 T11: 0.3873 T22: 0.6351 REMARK 3 T33: 0.5777 T12: -0.0879 REMARK 3 T13: 0.0899 T23: -0.1449 REMARK 3 L TENSOR REMARK 3 L11: 4.1355 L22: 5.2951 REMARK 3 L33: 5.0111 L12: -0.1352 REMARK 3 L13: 1.5162 L23: -0.9206 REMARK 3 S TENSOR REMARK 3 S11: -0.0473 S12: 0.6563 S13: -0.2961 REMARK 3 S21: -0.2817 S22: 0.1926 S23: 0.4567 REMARK 3 S31: -0.0184 S32: 0.6220 S33: -0.1412 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 242 THROUGH 310 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9149 -39.0072 -15.5248 REMARK 3 T TENSOR REMARK 3 T11: 0.7570 T22: 0.7354 REMARK 3 T33: 0.6366 T12: 0.1203 REMARK 3 T13: -0.0629 T23: -0.0541 REMARK 3 L TENSOR REMARK 3 L11: 3.7848 L22: 4.4331 REMARK 3 L33: 1.8560 L12: 0.0935 REMARK 3 L13: -0.3034 L23: -1.7138 REMARK 3 S TENSOR REMARK 3 S11: 0.3662 S12: -0.2336 S13: 0.0977 REMARK 3 S21: -0.6176 S22: 0.1414 S23: 0.6089 REMARK 3 S31: 0.6938 S32: -0.1019 S33: -0.3932 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 311 THROUGH 394 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8964 -27.6592 -4.6841 REMARK 3 T TENSOR REMARK 3 T11: 0.5337 T22: 0.5780 REMARK 3 T33: 0.7732 T12: -0.0158 REMARK 3 T13: 0.0879 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 1.8675 L22: 1.2776 REMARK 3 L33: 2.5824 L12: 1.0153 REMARK 3 L13: 3.2010 L23: 0.1591 REMARK 3 S TENSOR REMARK 3 S11: 0.1156 S12: -0.3263 S13: 0.2802 REMARK 3 S21: 0.2391 S22: 0.0393 S23: 0.3748 REMARK 3 S31: -0.3900 S32: -0.1803 S33: -0.0652 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 395 THROUGH 430 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.9135 -17.2564 -8.2379 REMARK 3 T TENSOR REMARK 3 T11: 0.6853 T22: 0.8320 REMARK 3 T33: 0.5445 T12: 0.1891 REMARK 3 T13: 0.0084 T23: 0.1175 REMARK 3 L TENSOR REMARK 3 L11: 2.2768 L22: 2.3966 REMARK 3 L33: 2.6763 L12: 1.8160 REMARK 3 L13: 1.7245 L23: 1.6459 REMARK 3 S TENSOR REMARK 3 S11: -0.1297 S12: 0.5752 S13: 0.0554 REMARK 3 S21: -0.9269 S22: 0.1253 S23: 0.2834 REMARK 3 S31: -0.0666 S32: -0.0041 S33: 0.0838 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FSG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1290065705. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.7712 REMARK 200 MONOCHROMATOR : SI-111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25102 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.210 REMARK 200 RESOLUTION RANGE LOW (A) : 47.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.75 REMARK 200 R MERGE FOR SHELL (I) : 0.72000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.830 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4EXK REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17% PEG3350 0.2M AMMONIUM CITRATE PH REMARK 280 5.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.81500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.75000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.42000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.75000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.81500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.42000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 147 REMARK 465 THR A 148 REMARK 465 THR A 149 REMARK 465 LYS A 150 REMARK 465 ASP A 151 REMARK 465 ASN A 152 REMARK 465 LYS A 153 REMARK 465 GLY A 154 REMARK 465 ASP A 161 REMARK 465 ASP A 162 REMARK 465 SER A 163 REMARK 465 SER A 164 REMARK 465 PHE A 165 REMARK 465 GLU A 166 REMARK 465 ASP A 167 REMARK 465 VAL A 168 REMARK 465 ASN A 169 REMARK 465 GLY A 170 REMARK 465 ILE A 171 REMARK 465 LEU A 255 REMARK 465 THR A 350 REMARK 465 SER A 351 REMARK 465 GLU A 352 REMARK 465 GLU A 353 REMARK 465 LYS A 354 REMARK 465 LEU A 355 REMARK 465 ARG A 356 REMARK 465 LYS A 357 REMARK 465 LYS A 358 REMARK 465 SER A 359 REMARK 465 GLU A 431 REMARK 465 HIS A 432 REMARK 465 HIS A 433 REMARK 465 HIS A 434 REMARK 465 HIS A 435 REMARK 465 HIS A 436 REMARK 465 HIS A 437 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MSE A-372 CG SE CE REMARK 470 LYS A-371 CG CD CE NZ REMARK 470 VAL A 130 CG1 CG2 REMARK 470 LYS A 160 CG CD CE NZ REMARK 470 ARG A 172 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 173 CG CD CE NZ REMARK 470 THR A 250 OG1 CG2 REMARK 470 VAL A 348 CG1 CG2 REMARK 470 LEU A 430 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 390 H ASP A 394 1.54 REMARK 500 HG1 THR A 261 OD2 ASP A 264 1.58 REMARK 500 O ALA A -182 OG1 THR A -179 2.08 REMARK 500 OE1 GLU A -328 O3 GLC B 3 2.11 REMARK 500 OG1 THR A 261 OD2 ASP A 264 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A-368 5.48 -50.13 REMARK 500 LEU A-250 63.22 -155.24 REMARK 500 ASN A-248 79.86 -117.98 REMARK 500 ALA A-204 -81.76 -81.93 REMARK 500 LYS A-133 64.30 68.31 REMARK 500 GLU A 242 150.54 -48.68 REMARK 500 ALA A 252 83.99 -162.57 REMARK 500 GLU A 277 106.86 -53.55 REMARK 500 GLU A 300 50.47 -91.88 REMARK 500 ASP A 377 78.18 -62.31 REMARK 500 ASN A 395 31.50 -94.38 REMARK 500 HIS A 397 67.87 -105.89 REMARK 500 ASP A 400 -169.51 -79.78 REMARK 500 ASN A 423 88.30 -62.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 MALTOSE BINDING PROTEIN (MBP) NUCLEOPROTEIN FUSION PROTEIN REMARK 999 THE MBP IS TRUNCATED AT C-TERMINUS TO MAKE IT MORE SOLUBLE. REMARK 999 RESIDUES 1-112 OF HANTAAN VIRUS NUCLEOPROTEIN ARE DELETED DBREF 5FSG A -372 -14 UNP P0AEX9 MALE_ECOLI 26 384 DBREF 5FSG A 113 429 UNP P05133 NCAP_HANTV 113 429 SEQADV 5FSG ALA A -13 UNP P05133 LINKER SEQADV 5FSG ALA A -12 UNP P05133 LINKER SEQADV 5FSG LEU A -11 UNP P05133 LINKER SEQADV 5FSG ALA A -10 UNP P05133 LINKER SEQADV 5FSG ALA A -9 UNP P05133 LINKER SEQADV 5FSG GLY A -8 UNP P05133 LINKER SEQADV 5FSG SER A -7 UNP P05133 LINKER SEQADV 5FSG ALA A -6 UNP P05133 LINKER SEQADV 5FSG GLN A -5 UNP P05133 LINKER SEQADV 5FSG THR A -4 UNP P05133 LINKER SEQADV 5FSG ASN A -3 UNP P05133 LINKER SEQADV 5FSG ALA A -2 UNP P05133 LINKER SEQADV 5FSG ALA A -1 UNP P05133 LINKER SEQADV 5FSG ALA A 0 UNP P05133 LINKER SEQADV 5FSG LEU A 430 UNP P05133 EXPRESSION TAG SEQADV 5FSG GLU A 431 UNP P05133 EXPRESSION TAG SEQADV 5FSG HIS A 432 UNP P05133 EXPRESSION TAG SEQADV 5FSG HIS A 433 UNP P05133 EXPRESSION TAG SEQADV 5FSG HIS A 434 UNP P05133 EXPRESSION TAG SEQADV 5FSG HIS A 435 UNP P05133 EXPRESSION TAG SEQADV 5FSG HIS A 436 UNP P05133 EXPRESSION TAG SEQADV 5FSG HIS A 437 UNP P05133 EXPRESSION TAG SEQADV 5FSG ASN A 185 UNP P05133 GLN 185 CONFLICT SEQADV 5FSG ASP A 377 UNP P05133 GLY 377 CONFLICT SEQRES 1 A 698 MSE LYS ILE GLU GLU GLY LYS LEU VAL ILE TRP ILE ASN SEQRES 2 A 698 GLY ASP LYS GLY TYR ASN GLY LEU ALA GLU VAL GLY LYS SEQRES 3 A 698 LYS PHE GLU LYS ASP THR GLY ILE LYS VAL THR VAL GLU SEQRES 4 A 698 HIS PRO ASP LYS LEU GLU GLU LYS PHE PRO GLN VAL ALA SEQRES 5 A 698 ALA THR GLY ASP GLY PRO ASP ILE ILE PHE TRP ALA HIS SEQRES 6 A 698 ASP ARG PHE GLY GLY TYR ALA GLN SER GLY LEU LEU ALA SEQRES 7 A 698 GLU ILE THR PRO ASP LYS ALA PHE GLN ASP LYS LEU TYR SEQRES 8 A 698 PRO PHE THR TRP ASP ALA VAL ARG TYR ASN GLY LYS LEU SEQRES 9 A 698 ILE ALA TYR PRO ILE ALA VAL GLU ALA LEU SER LEU ILE SEQRES 10 A 698 TYR ASN LYS ASP LEU LEU PRO ASN PRO PRO LYS THR TRP SEQRES 11 A 698 GLU GLU ILE PRO ALA LEU ASP LYS GLU LEU LYS ALA LYS SEQRES 12 A 698 GLY LYS SER ALA LEU MSE PHE ASN LEU GLN GLU PRO TYR SEQRES 13 A 698 PHE THR TRP PRO LEU ILE ALA ALA ASP GLY GLY TYR ALA SEQRES 14 A 698 PHE LYS TYR GLU ASN GLY LYS TYR ASP ILE LYS ASP VAL SEQRES 15 A 698 GLY VAL ASP ASN ALA GLY ALA LYS ALA GLY LEU THR PHE SEQRES 16 A 698 LEU VAL ASP LEU ILE LYS ASN LYS HIS MSE ASN ALA ASP SEQRES 17 A 698 THR ASP TYR SER ILE ALA GLU ALA ALA PHE ASN LYS GLY SEQRES 18 A 698 GLU THR ALA MSE THR ILE ASN GLY PRO TRP ALA TRP SER SEQRES 19 A 698 ASN ILE ASP THR SER LYS VAL ASN TYR GLY VAL THR VAL SEQRES 20 A 698 LEU PRO THR PHE LYS GLY GLN PRO SER LYS PRO PHE VAL SEQRES 21 A 698 GLY VAL LEU SER ALA GLY ILE ASN ALA ALA SER PRO ASN SEQRES 22 A 698 LYS GLU LEU ALA LYS GLU PHE LEU GLU ASN TYR LEU LEU SEQRES 23 A 698 THR ASP GLU GLY LEU GLU ALA VAL ASN LYS ASP LYS PRO SEQRES 24 A 698 LEU GLY ALA VAL ALA LEU LYS SER TYR GLU GLU GLU LEU SEQRES 25 A 698 ALA LYS ASP PRO ARG ILE ALA ALA THR MSE GLU ASN ALA SEQRES 26 A 698 GLN LYS GLY GLU ILE MSE PRO ASN ILE PRO GLN MSE SER SEQRES 27 A 698 ALA PHE TRP TYR ALA VAL ARG THR ALA VAL ILE ASN ALA SEQRES 28 A 698 ALA SER GLY ARG GLN THR VAL ASP ALA ALA LEU ALA ALA SEQRES 29 A 698 GLY SER ALA GLN THR ASN ALA ALA ALA THR GLY GLN THR SEQRES 30 A 698 ALA ASP TRP LEU SER ILE ILE VAL TYR LEU THR SER PHE SEQRES 31 A 698 VAL VAL PRO ILE LEU LEU LYS ALA LEU TYR MSE LEU THR SEQRES 32 A 698 THR ARG GLY ARG GLN THR THR LYS ASP ASN LYS GLY THR SEQRES 33 A 698 ARG ILE ARG PHE LYS ASP ASP SER SER PHE GLU ASP VAL SEQRES 34 A 698 ASN GLY ILE ARG LYS PRO LYS HIS LEU TYR VAL SER LEU SEQRES 35 A 698 PRO ASN ALA ASN SER SER MSE LYS ALA GLU GLU ILE THR SEQRES 36 A 698 PRO GLY ARG TYR ARG THR ALA VAL CYS GLY LEU TYR PRO SEQRES 37 A 698 ALA GLN ILE LYS ALA ARG GLN MSE ILE SER PRO VAL MSE SEQRES 38 A 698 SER VAL ILE GLY PHE LEU ALA LEU ALA LYS ASP TRP SER SEQRES 39 A 698 ASP ARG ILE GLU GLN TRP LEU ILE GLU PRO CYS LYS LEU SEQRES 40 A 698 LEU PRO ASP THR ALA ALA VAL SER LEU LEU GLY GLY PRO SEQRES 41 A 698 ALA THR ASN ARG ASP TYR LEU ARG GLN ARG GLN VAL ALA SEQRES 42 A 698 LEU GLY ASN MSE GLU THR LYS GLU SER LYS ALA ILE ARG SEQRES 43 A 698 GLN HIS ALA GLU ALA ALA GLY CYS SER MSE ILE GLU ASP SEQRES 44 A 698 ILE GLU SER PRO SER SER ILE TRP VAL PHE ALA GLY ALA SEQRES 45 A 698 PRO ASP ARG CYS PRO PRO THR CYS LEU PHE ILE ALA GLY SEQRES 46 A 698 ILE ALA GLU LEU GLY ALA PHE PHE SER ILE LEU GLN ASP SEQRES 47 A 698 MSE ARG ASN THR ILE MSE ALA SER LYS THR VAL GLY THR SEQRES 48 A 698 SER GLU GLU LYS LEU ARG LYS LYS SER SER PHE TYR GLN SEQRES 49 A 698 SER TYR LEU ARG ARG THR GLN SER MSE GLY ILE GLN LEU SEQRES 50 A 698 ASP GLN ARG ILE ILE VAL LEU PHE MSE VAL ALA TRP GLY SEQRES 51 A 698 LYS GLU ALA VAL ASP ASN PHE HIS LEU GLY ASP ASP MSE SEQRES 52 A 698 ASP PRO GLU LEU ARG THR LEU ALA GLN SER LEU ILE ASP SEQRES 53 A 698 VAL LYS VAL LYS GLU ILE SER ASN GLN GLU PRO LEU LYS SEQRES 54 A 698 LEU LEU GLU HIS HIS HIS HIS HIS HIS MODRES 5FSG MSE A -372 MET SELENOMETHIONINE MODRES 5FSG MSE A -224 MET SELENOMETHIONINE MODRES 5FSG MSE A -168 MET SELENOMETHIONINE MODRES 5FSG MSE A -148 MET SELENOMETHIONINE MODRES 5FSG MSE A -51 MET SELENOMETHIONINE MODRES 5FSG MSE A -42 MET SELENOMETHIONINE MODRES 5FSG MSE A -36 MET SELENOMETHIONINE MODRES 5FSG MSE A 140 MET SELENOMETHIONINE MODRES 5FSG MSE A 188 MET SELENOMETHIONINE MODRES 5FSG MSE A 215 MET SELENOMETHIONINE MODRES 5FSG MSE A 220 MET SELENOMETHIONINE MODRES 5FSG MSE A 276 MET SELENOMETHIONINE MODRES 5FSG MSE A 295 MET SELENOMETHIONINE MODRES 5FSG MSE A 338 MET SELENOMETHIONINE MODRES 5FSG MSE A 343 MET SELENOMETHIONINE MODRES 5FSG MSE A 372 MET SELENOMETHIONINE MODRES 5FSG MSE A 385 MET SELENOMETHIONINE MODRES 5FSG MSE A 402 MET SELENOMETHIONINE HET MSE A-372 5 HET MSE A-224 17 HET MSE A-168 17 HET MSE A-148 17 HET MSE A -51 17 HET MSE A -42 17 HET MSE A -36 17 HET MSE A 140 17 HET MSE A 188 17 HET MSE A 215 17 HET MSE A 220 17 HET MSE A 276 17 HET MSE A 295 17 HET MSE A 338 17 HET MSE A 343 17 HET MSE A 372 17 HET MSE A 385 17 HET MSE A 402 17 HET GLC B 1 23 HET GLC B 2 21 HET GLC B 3 21 HET GLC B 4 22 HETNAM MSE SELENOMETHIONINE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 2 GLC 4(C6 H12 O6) HELIX 1 1 GLY A -356 GLY A -340 1 17 HELIX 2 2 LYS A -330 ALA A -320 1 11 HELIX 3 3 ARG A -306 SER A -299 1 8 HELIX 4 4 ASP A -290 ASP A -285 1 6 HELIX 5 5 TYR A -282 VAL A -275 1 8 HELIX 6 6 GLU A -241 ALA A -231 1 11 HELIX 7 7 GLU A -219 ASP A -208 1 12 HELIX 8 8 ASN A -187 ASN A -171 1 17 HELIX 9 9 ASP A -163 LYS A -153 1 11 HELIX 10 10 GLY A -144 TRP A -142 5 3 HELIX 11 11 ALA A -141 SER A -134 1 8 HELIX 12 12 ASN A -100 TYR A -89 1 12 HELIX 13 13 THR A -86 LYS A -75 1 12 HELIX 14 14 LEU A -68 ALA A -60 1 9 HELIX 15 15 ASP A -58 GLY A -45 1 14 HELIX 16 16 GLN A -37 SER A -20 1 18 HELIX 17 17 THR A -16 THR A 113 1 18 HELIX 18 18 ASP A 118 PHE A 129 1 12 HELIX 19 19 VAL A 130 THR A 142 1 13 HELIX 20 20 THR A 194 TYR A 206 1 13 HELIX 21 21 PRO A 207 GLN A 214 1 8 HELIX 22 22 MSE A 220 GLY A 224 5 5 HELIX 23 23 PHE A 225 ASP A 231 1 7 HELIX 24 24 ASP A 231 GLU A 242 1 12 HELIX 25 25 THR A 261 GLU A 277 1 17 HELIX 26 26 THR A 278 ALA A 291 1 14 HELIX 27 27 GLY A 324 THR A 347 1 24 HELIX 28 28 SER A 360 SER A 371 1 12 HELIX 29 29 ASP A 377 ASN A 395 1 19 HELIX 30 30 ASP A 403 ILE A 421 1 19 SHEET 1 AA 5 VAL A-337 GLU A-334 0 SHEET 2 AA 5 LEU A-365 TRP A-362 1 O LEU A-365 N THR A-336 SHEET 3 AA 5 ILE A-313 ALA A-309 1 O ILE A-313 N TRP A-362 SHEET 4 AA 5 PHE A-114 ILE A-106 -1 O SER A-109 N TRP A-310 SHEET 5 AA 5 GLU A -44 ILE A -43 1 O GLU A -44 N VAL A-113 SHEET 1 AB 6 VAL A-337 GLU A-334 0 SHEET 2 AB 6 LEU A-365 TRP A-362 1 O LEU A-365 N THR A-336 SHEET 3 AB 6 ILE A-313 ALA A-309 1 O ILE A-313 N TRP A-362 SHEET 4 AB 6 PHE A-114 ILE A-106 -1 O SER A-109 N TRP A-310 SHEET 5 AB 6 TYR A-266 GLU A-261 -1 O TYR A-266 N ALA A-108 SHEET 6 AB 6 ALA A -71 VAL A -70 -1 O ALA A -71 N VAL A-262 SHEET 1 AC 2 GLU A -44 ILE A -43 0 SHEET 2 AC 2 PHE A-114 ILE A-106 1 N VAL A-113 O GLU A -44 SHEET 1 AD 2 ARG A-274 TYR A-273 0 SHEET 2 AD 2 LYS A-270 LEU A-269 -1 O LYS A-270 N TYR A-273 SHEET 1 AE 4 SER A-227 LEU A-225 0 SHEET 2 AE 4 THR A-150 ASN A-145 1 N ALA A-149 O SER A-227 SHEET 3 AE 4 SER A-258 ASN A-254 -1 O SER A-258 N ASN A-145 SHEET 4 AE 4 TYR A-130 THR A-127 -1 O GLY A-129 N TYR A-255 SHEET 1 AF 2 PHE A-203 GLU A-200 0 SHEET 2 AF 2 LYS A-197 VAL A-191 -1 O LYS A-197 N GLU A-200 SHEET 1 AG 2 ARG A 156 PHE A 159 0 SHEET 2 AG 2 LEU A 177 SER A 180 -1 O LEU A 177 N PHE A 159 LINK C LEU A-225 N MSE A-224 1555 1555 1.33 LINK C MSE A-224 N PHE A-223 1555 1555 1.33 LINK C HIS A-169 N MSE A-168 1555 1555 1.33 LINK C MSE A-168 N ASN A-167 1555 1555 1.33 LINK C ALA A-149 N MSE A-148 1555 1555 1.33 LINK C MSE A-148 N THR A-147 1555 1555 1.33 LINK C THR A -52 N MSE A -51 1555 1555 1.33 LINK C MSE A -51 N GLU A -50 1555 1555 1.33 LINK C ILE A -43 N MSE A -42 1555 1555 1.33 LINK C MSE A -42 N PRO A -41 1555 1555 1.34 LINK C GLN A -37 N MSE A -36 1555 1555 1.33 LINK C MSE A -36 N SER A -35 1555 1555 1.33 LINK C TYR A 139 N MSE A 140 1555 1555 1.33 LINK C MSE A 140 N LEU A 141 1555 1555 1.33 LINK C SER A 187 N MSE A 188 1555 1555 1.33 LINK C MSE A 188 N LYS A 189 1555 1555 1.33 LINK C GLN A 214 N MSE A 215 1555 1555 1.33 LINK C MSE A 215 N ILE A 216 1555 1555 1.33 LINK C VAL A 219 N MSE A 220 1555 1555 1.33 LINK C MSE A 220 N SER A 221 1555 1555 1.33 LINK C ASN A 275 N MSE A 276 1555 1555 1.33 LINK C MSE A 276 N GLU A 277 1555 1555 1.33 LINK C SER A 294 N MSE A 295 1555 1555 1.33 LINK C MSE A 295 N ILE A 296 1555 1555 1.33 LINK C ASP A 337 N MSE A 338 1555 1555 1.33 LINK C MSE A 338 N ARG A 339 1555 1555 1.33 LINK C ILE A 342 N MSE A 343 1555 1555 1.33 LINK C MSE A 343 N ALA A 344 1555 1555 1.33 LINK C SER A 371 N MSE A 372 1555 1555 1.33 LINK C MSE A 372 N GLY A 373 1555 1555 1.33 LINK C PHE A 384 N MSE A 385 1555 1555 1.33 LINK C MSE A 385 N VAL A 386 1555 1555 1.33 LINK C ASP A 401 N MSE A 402 1555 1555 1.33 LINK C MSE A 402 N ASP A 403 1555 1555 1.33 LINK O4 GLC B 1 C1 GLC B 2 1555 1555 1.42 LINK O4 GLC B 2 C1 GLC B 3 1555 1555 1.43 LINK O4 GLC B 3 C1 GLC B 4 1555 1555 1.41 CISPEP 1 LEU A 247 PRO A 248 0 -1.02 CISPEP 2 ALA A 323 GLY A 324 0 -1.29 CISPEP 3 ILE A 421 SER A 422 0 -3.58 CRYST1 69.630 86.840 131.500 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014362 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011515 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007605 0.00000 HETATM 1 N MSE A-372 17.995 15.325 -45.628 1.00 90.13 N ANISOU 1 N MSE A-372 11364 11404 11479 2549 178 524 N HETATM 2 CA MSE A-372 17.052 14.305 -46.068 1.00 91.60 C ANISOU 2 CA MSE A-372 11562 11435 11805 2699 -135 188 C HETATM 3 C MSE A-372 17.414 12.922 -45.561 1.00 91.60 C ANISOU 3 C MSE A-372 11351 11350 12101 2612 -121 171 C HETATM 4 O MSE A-372 16.611 12.237 -44.924 1.00 91.20 O ANISOU 4 O MSE A-372 11088 11167 12396 2465 -295 33 O HETATM 5 CB MSE A-372 17.009 14.265 -47.597 1.00 81.21 C ANISOU 5 CB MSE A-372 10611 10101 10142 3125 -239 -9 C