HEADER HYDROLASE 06-JAN-16 5FSP TITLE STRUCTURE OF THERMOLYSIN PREPARED BY THE 'SOAK-AND-FREEZE' METHOD TITLE 2 UNDER 100 BAR OF KRYPTON PRESSURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: THERMOLYSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: THERMOSTABLE NEUTRAL PROTEINASE; COMPND 5 EC: 3.4.24.27; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS THERMOPROTEOLYTICUS; SOURCE 3 ORGANISM_TAXID: 1427; SOURCE 4 EXPRESSION_SYSTEM: BACILLUS SUBTILIS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 1423 KEYWDS HYDROLASE, METALLOPROTEINASE, THERMOLYSINE, KRYPTON, PRESSURE, FLASH KEYWDS 2 FREEZING EXPDTA X-RAY DIFFRACTION AUTHOR B.LAFUMAT,C.MUELLER-DIECKMANN,N.COLLOC'H,T.PRANGE,A.ROYANT,P.VAN DER AUTHOR 2 LINDEN,P.CARPENTIER REVDAT 5 10-JAN-24 5FSP 1 REMARK REVDAT 4 21-FEB-18 5FSP 1 AUTHOR JRNL REVDAT 3 10-MAY-17 5FSP 1 AUTHOR REVDAT 2 16-NOV-16 5FSP 1 TITLE REVDAT 1 26-OCT-16 5FSP 0 JRNL AUTH B.LAFUMAT,C.MUELLER-DIECKMANN,N.COLLOC'H,T.PRANGE,A.ROYANT, JRNL AUTH 2 P.VAN DER LINDEN,P.CARPENTIER JRNL TITL GAS-SENSITIVE BIOLOGICAL CRYSTALS PROCESSED IN PRESSURIZED JRNL TITL 2 OXYGEN AND KRYPTON ATMOSPHERES: DECIPHERING GAS CHANNELS IN JRNL TITL 3 PROTEINS USING A NOVEL `SOAK-AND-FREEZE' METHODOLOGY. JRNL REF J.APPL.CRYSTALLOGR. V. 49 1478 2016 JRNL REFN ISSN 0021-8898 JRNL DOI 10.1107/S1600576716010992 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.580 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 37016 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3402 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.5210 - 4.8926 1.00 2755 128 0.1688 0.1838 REMARK 3 2 4.8926 - 3.8840 1.00 2733 147 0.1307 0.1377 REMARK 3 3 3.8840 - 3.3932 1.00 2759 138 0.1449 0.1813 REMARK 3 4 3.3932 - 3.0830 1.00 2705 166 0.1528 0.1585 REMARK 3 5 3.0830 - 2.8621 1.00 2748 143 0.1573 0.1612 REMARK 3 6 2.8621 - 2.6934 1.00 2749 129 0.1497 0.1721 REMARK 3 7 2.6934 - 2.5585 1.00 2744 145 0.1489 0.1498 REMARK 3 8 2.5585 - 2.4471 1.00 2742 125 0.1540 0.1790 REMARK 3 9 2.4471 - 2.3529 1.00 2796 101 0.1579 0.2284 REMARK 3 10 2.3529 - 2.2717 1.00 2708 147 0.1525 0.1560 REMARK 3 11 2.2717 - 2.2007 1.00 2769 142 0.1489 0.1800 REMARK 3 12 2.2007 - 2.1378 1.00 2727 147 0.1417 0.1826 REMARK 3 13 2.1378 - 2.0815 1.00 2718 171 0.1398 0.1443 REMARK 3 14 2.0815 - 2.0307 1.00 2717 159 0.1481 0.1963 REMARK 3 15 2.0307 - 1.9846 1.00 2709 138 0.1523 0.2038 REMARK 3 16 1.9846 - 1.9423 1.00 2742 149 0.1575 0.2079 REMARK 3 17 1.9423 - 1.9035 1.00 2749 131 0.1507 0.2029 REMARK 3 18 1.9035 - 1.8675 1.00 2751 154 0.1582 0.1962 REMARK 3 19 1.8675 - 1.8342 1.00 2704 163 0.1740 0.1841 REMARK 3 20 1.8342 - 1.8031 1.00 2733 159 0.1777 0.2232 REMARK 3 21 1.8031 - 1.7740 1.00 2757 127 0.1880 0.2619 REMARK 3 22 1.7740 - 1.7467 1.00 2707 141 0.1882 0.1798 REMARK 3 23 1.7467 - 1.7210 1.00 2763 121 0.2030 0.2620 REMARK 3 24 1.7210 - 1.7000 0.93 2566 131 0.2421 0.2181 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2582 REMARK 3 ANGLE : 1.110 3532 REMARK 3 CHIRALITY : 0.047 380 REMARK 3 PLANARITY : 0.006 467 REMARK 3 DIHEDRAL : 13.441 909 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FSP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1290065950. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.864 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68932 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 5.800 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 17.40 REMARK 200 R MERGE (I) : 0.01000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 16.70 REMARK 200 R MERGE FOR SHELL (I) : 0.06000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.820 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3DO1 REMARK 200 REMARK 200 REMARK: ANOMALOUS DATA REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1:1 WITH 50MM MES PH6, 1MNACL 45%(V/V) REMARK 280 DMSO RESERVOIR: 35% SATURATED AMONIUM SULPHATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.04000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 86.08000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 64.56000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 107.60000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.52000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.04000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 86.08000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 107.60000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 64.56000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 21.52000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2011 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2151 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2156 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2278 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C VAL A 2318 N LYS A 2319 1.33 REMARK 500 O HOH A 2164 O HOH A 2166 1.88 REMARK 500 O HOH A 2113 O HOH A 2240 1.89 REMARK 500 O HOH A 2164 O HOH A 2165 1.92 REMARK 500 O HOH A 2114 O HOH A 2232 1.96 REMARK 500 O HOH A 2115 O HOH A 2233 1.97 REMARK 500 O HOH A 2114 O HOH A 2233 2.01 REMARK 500 O HOH A 2266 O HOH A 2268 2.04 REMARK 500 O HOH A 2164 O HOH A 2284 2.05 REMARK 500 O HOH A 2029 O HOH A 2030 2.06 REMARK 500 O HOH A 2113 O HOH A 2114 2.08 REMARK 500 O HOH A 2121 O HOH A 2245 2.12 REMARK 500 O HOH A 2062 O HOH A 2072 2.12 REMARK 500 O HOH A 2168 O HOH A 2187 2.13 REMARK 500 O HOH A 2004 O HOH A 2005 2.14 REMARK 500 OE1 GLU A 143 O HOH A 2166 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2030 O HOH A 2218 8665 2.01 REMARK 500 O HOH A 2227 O HOH A 2227 10664 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 26 -42.26 49.62 REMARK 500 THR A 26 -52.37 60.04 REMARK 500 SER A 92 -169.18 57.03 REMARK 500 SER A 107 -162.97 60.92 REMARK 500 ASN A 111 49.10 -89.69 REMARK 500 THR A 152 -99.27 -121.87 REMARK 500 ASN A 159 -139.39 52.32 REMARK 500 THR A 194 79.24 40.84 REMARK 500 ASP A 207 81.02 -150.47 REMARK 500 ILE A 232 -60.13 -101.60 REMARK 500 TYR A 274 -39.75 -130.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ASN A 97 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 VAL A 2318 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VAL A 2318 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LYS A 2319 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1317 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KR A 1318 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KR A 1319 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KR A 1320 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KR A 1321 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KR A 1322 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KR A 1323 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KR A 1324 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KR A 1325 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1326 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1327 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1328 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1329 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FSJ RELATED DB: PDB REMARK 900 THERMOLYSIN SOAK-AND-FREEZE UNDER 45BAR DIOXYGEN REMARK 900 RELATED ID: 5FSS RELATED DB: PDB REMARK 900 THERMOLYSIN SOAK-AND-FREEZE UNDER 40BAR OF KRYPTON REMARK 900 RELATED ID: 5FST RELATED DB: PDB REMARK 900 LYSOZYME SOAK-AND-FREEZE UNDER 100BAR KRYPTON DBREF 5FSP A 1 316 UNP P00800 THER_BACTH 233 548 SEQRES 1 A 316 ILE THR GLY THR SER THR VAL GLY VAL GLY ARG GLY VAL SEQRES 2 A 316 LEU GLY ASP GLN LYS ASN ILE ASN THR THR TYR SER THR SEQRES 3 A 316 TYR TYR TYR LEU GLN ASP ASN THR ARG GLY ASN GLY ILE SEQRES 4 A 316 PHE THR TYR ASP ALA LYS TYR ARG THR THR LEU PRO GLY SEQRES 5 A 316 SER LEU TRP ALA ASP ALA ASP ASN GLN PHE PHE ALA SER SEQRES 6 A 316 TYR ASP ALA PRO ALA VAL ASP ALA HIS TYR TYR ALA GLY SEQRES 7 A 316 VAL THR TYR ASP TYR TYR LYS ASN VAL HIS ASN ARG LEU SEQRES 8 A 316 SER TYR ASP GLY ASN ASN ALA ALA ILE ARG SER SER VAL SEQRES 9 A 316 HIS TYR SER GLN GLY TYR ASN ASN ALA PHE TRP ASN GLY SEQRES 10 A 316 SER GLN MET VAL TYR GLY ASP GLY ASP GLY GLN THR PHE SEQRES 11 A 316 ILE PRO LEU SER GLY GLY ILE ASP VAL VAL ALA HIS GLU SEQRES 12 A 316 LEU THR HIS ALA VAL THR ASP TYR THR ALA GLY LEU ILE SEQRES 13 A 316 TYR GLN ASN GLU SER GLY ALA ILE ASN GLU ALA ILE SER SEQRES 14 A 316 ASP ILE PHE GLY THR LEU VAL GLU PHE TYR ALA ASN LYS SEQRES 15 A 316 ASN PRO ASP TRP GLU ILE GLY GLU ASP VAL TYR THR PRO SEQRES 16 A 316 GLY ILE SER GLY ASP SER LEU ARG SER MET SER ASP PRO SEQRES 17 A 316 ALA LYS TYR GLY ASP PRO ASP HIS TYR SER LYS ARG TYR SEQRES 18 A 316 THR GLY THR GLN ASP ASN GLY GLY VAL HIS ILE ASN SER SEQRES 19 A 316 GLY ILE ILE ASN LYS ALA ALA TYR LEU ILE SER GLN GLY SEQRES 20 A 316 GLY THR HIS TYR GLY VAL SER VAL VAL GLY ILE GLY ARG SEQRES 21 A 316 ASP LYS LEU GLY LYS ILE PHE TYR ARG ALA LEU THR GLN SEQRES 22 A 316 TYR LEU THR PRO THR SER ASN PHE SER GLN LEU ARG ALA SEQRES 23 A 316 ALA ALA VAL GLN SER ALA THR ASP LEU TYR GLY SER THR SEQRES 24 A 316 SER GLN GLU VAL ALA SER VAL LYS GLN ALA PHE ASP ALA SEQRES 25 A 316 VAL GLY VAL LYS HET VAL A2318 6 HET LYS A2319 10 HET ZN A1317 1 HET KR A1318 1 HET KR A1319 1 HET KR A1320 1 HET KR A1321 1 HET KR A1322 1 HET KR A1323 1 HET KR A1324 1 HET KR A1325 1 HET CA A1326 1 HET CA A1327 1 HET CA A1328 1 HET CA A1329 1 HETNAM VAL VALINE HETNAM LYS LYSINE HETNAM ZN ZINC ION HETNAM KR KRYPTON HETNAM CA CALCIUM ION FORMUL 2 VAL C5 H11 N O2 FORMUL 3 LYS C6 H15 N2 O2 1+ FORMUL 4 ZN ZN 2+ FORMUL 5 KR 8(KR) FORMUL 13 CA 4(CA 2+) FORMUL 17 HOH *285(H2 O) HELIX 1 1 ALA A 64 TYR A 66 5 3 HELIX 2 2 ASP A 67 ASN A 89 1 23 HELIX 3 3 PRO A 132 GLY A 135 5 4 HELIX 4 4 GLY A 136 THR A 152 1 17 HELIX 5 5 GLN A 158 ASN A 181 1 24 HELIX 6 6 ASP A 207 GLY A 212 5 6 HELIX 7 7 HIS A 216 ARG A 220 5 5 HELIX 8 8 THR A 224 VAL A 230 1 7 HELIX 9 9 ASN A 233 GLY A 247 1 15 HELIX 10 10 GLY A 259 TYR A 274 1 16 HELIX 11 11 ASN A 280 GLY A 297 1 18 HELIX 12 12 SER A 300 VAL A 313 1 14 SHEET 1 AA 5 ALA A 56 ASP A 57 0 SHEET 2 AA 5 TYR A 28 TYR A 29 -1 O TYR A 28 N ASP A 57 SHEET 3 AA 5 GLN A 17 TYR A 24 -1 O THR A 23 N TYR A 29 SHEET 4 AA 5 THR A 4 ARG A 11 -1 O THR A 4 N TYR A 24 SHEET 5 AA 5 GLN A 61 PHE A 62 1 O PHE A 62 N ARG A 11 SHEET 1 AB 2 GLN A 31 ASP A 32 0 SHEET 2 AB 2 ILE A 39 ASP A 43 -1 O ILE A 39 N ASP A 32 SHEET 1 AC 2 SER A 53 LEU A 54 0 SHEET 2 AC 2 ILE A 39 ASP A 43 1 O ASP A 43 N SER A 53 SHEET 1 AD 5 ALA A 113 TRP A 115 0 SHEET 2 AD 5 MET A 120 GLY A 123 -1 O VAL A 121 N PHE A 114 SHEET 3 AD 5 ILE A 100 TYR A 106 1 O ARG A 101 N MET A 120 SHEET 4 AD 5 ILE A 39 ASP A 43 1 O PHE A 40 N SER A 102 SHEET 5 AD 5 SER A 53 LEU A 54 1 O SER A 53 N ASP A 43 SHEET 1 AE 5 ALA A 113 TRP A 115 0 SHEET 2 AE 5 MET A 120 GLY A 123 -1 O VAL A 121 N PHE A 114 SHEET 3 AE 5 ILE A 100 TYR A 106 1 O ARG A 101 N MET A 120 SHEET 4 AE 5 ILE A 39 ASP A 43 1 O PHE A 40 N SER A 102 SHEET 5 AE 5 GLN A 31 ASP A 32 -1 O ASP A 32 N ILE A 39 SHEET 1 AF 2 GLU A 187 ILE A 188 0 SHEET 2 AF 2 ARG A 203 SER A 204 -1 O ARG A 203 N ILE A 188 SHEET 1 AG 2 GLY A 248 HIS A 250 0 SHEET 2 AG 2 VAL A 253 VAL A 255 -1 O VAL A 253 N HIS A 250 CISPEP 1 LEU A 50 PRO A 51 0 2.93 SITE 1 AC1 12 ASN A 112 ALA A 113 GLU A 143 LEU A 202 SITE 2 AC1 12 ARG A 203 HIS A 231 KR A1325 HOH A2164 SITE 3 AC1 12 HOH A2165 HOH A2166 HOH A2284 LYS A2319 SITE 1 AC2 6 ASN A 111 ASN A 112 LEU A 202 HIS A 231 SITE 2 AC2 6 HOH A2285 VAL A2318 SITE 1 AC3 6 HIS A 142 HIS A 146 GLU A 166 HOH A2164 SITE 2 AC3 6 HOH A2165 HOH A2166 SITE 1 AC4 3 TYR A 84 SER A 92 TYR A 93 SITE 1 AC5 3 ARG A 35 GLY A 38 ALA A 98 SITE 1 AC6 4 ASP A 191 VAL A 192 TYR A 193 PRO A 195 SITE 1 AC7 4 GLU A 160 ARG A 220 ASN A 233 PHE A 281 SITE 1 AC8 1 GLN A 119 SITE 1 AC9 4 TYR A 27 GLY A 212 PRO A 214 HOH A2212 SITE 1 BC1 3 VAL A 7 ASN A 21 HOH A2032 SITE 1 BC2 3 HIS A 142 ARG A 203 VAL A2318 SITE 1 BC3 6 TYR A 193 THR A 194 ILE A 197 ASP A 200 SITE 2 BC3 6 HOH A2199 HOH A2201 SITE 1 BC4 6 ASP A 57 ASP A 59 GLN A 61 HOH A2087 SITE 2 BC4 6 HOH A2088 HOH A2090 SITE 1 BC5 6 ASP A 138 GLU A 177 ASP A 185 GLU A 187 SITE 2 BC5 6 GLU A 190 HOH A2189 SITE 1 BC6 5 GLU A 177 ASN A 183 ASP A 185 GLU A 190 SITE 2 BC6 5 HOH A2192 CRYST1 93.007 93.007 129.120 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010752 0.006208 0.000000 0.00000 SCALE2 0.000000 0.012415 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007745 0.00000