HEADER HYDROLASE 19-FEB-16 5FWQ TITLE APO STRUCTURE OF HUMAN LEUKOTRIENE A4 HYDROLASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HUMAN LEUKOTRIENE A4 HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LTA-4 HYDROLASE, LEUKOTRIENE A(4) HYDROLASE, HUMAN COMPND 5 LEUKOTRIENE A4 HYDROLASE; COMPND 6 EC: 3.3.2.6; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET 24 KEYWDS HYDROLASE, LEUKOTRIENE (LT) A4 HYDROLASE/AMINOPEPTIDASE, LTA4H EXPDTA X-RAY DIFFRACTION AUTHOR S.K.WITTMANN,L.KALINOWSKY,J.KRAMER,R.BLOECHER,D.STEINHILBER, AUTHOR 2 D.POGORYELOV,E.PROSCHAK,J.HEERING REVDAT 4 10-JAN-24 5FWQ 1 REMARK LINK REVDAT 3 08-MAY-19 5FWQ 1 JRNL REMARK REVDAT 2 09-NOV-16 5FWQ 1 JRNL REVDAT 1 05-OCT-16 5FWQ 0 JRNL AUTH S.K.WITTMANN,L.KALINOWSKY,J.S.KRAMER,R.BLOECHER,S.KNAPP, JRNL AUTH 2 D.STEINHILBER,D.POGORYELOV,E.PROSCHAK,J.HEERING JRNL TITL THERMODYNAMIC PROPERTIES OF LEUKOTRIENE A4HYDROLASE JRNL TITL 2 INHIBITORS. JRNL REF BIOORG.MED.CHEM. V. 24 5243 2016 JRNL REFN ESSN 1464-3391 JRNL PMID 27651294 JRNL DOI 10.1016/J.BMC.2016.08.047 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.K.WITTMANN,L.KALINOWSKY,J.S.KRAMER,R.BLOECHER,S.KNAPP, REMARK 1 AUTH 2 D.STEINHILBER,D.POGORYELOV,E.PROSCHAK,J.HEERING REMARK 1 TITL THERMODYNAMIC PROPERTIES OF LEUKOTRIENE A4 HYDROLASE REMARK 1 TITL 2 INHIBITORS. REMARK 1 REF BIOORG.MED.CHEM. V. 24 5243 2016 REMARK 1 REFN ISSN 0968-0896 REMARK 1 PMID 27651294 REMARK 1 DOI 10.1016/J.BMC.2016.08.047 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.140 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 40948 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1374 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.3051 - 4.4098 1.00 7650 138 0.1808 0.1538 REMARK 3 2 4.4098 - 3.5005 1.00 7660 139 0.1597 0.2052 REMARK 3 3 3.5005 - 3.0581 1.00 7656 132 0.1840 0.2430 REMARK 3 4 3.0581 - 2.7785 1.00 7651 136 0.1974 0.2243 REMARK 3 5 2.7785 - 2.5794 1.00 7642 137 0.1971 0.2582 REMARK 3 6 2.5794 - 2.4273 1.00 7700 137 0.2091 0.2856 REMARK 3 7 2.4273 - 2.3058 1.00 7629 141 0.2081 0.2383 REMARK 3 8 2.3058 - 2.2054 1.00 7655 141 0.2234 0.2662 REMARK 3 9 2.2054 - 2.1205 1.00 7605 138 0.2356 0.2514 REMARK 3 10 2.1205 - 2.0473 0.98 7560 135 0.2479 0.2859 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.970 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4988 REMARK 3 ANGLE : 1.008 6774 REMARK 3 CHIRALITY : 0.044 754 REMARK 3 PLANARITY : 0.004 864 REMARK 3 DIHEDRAL : 14.167 1827 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5FWQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1290066258. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000040 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40948 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 49.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.31000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 13.10 REMARK 200 R MERGE FOR SHELL (I) : 1.16000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.870 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER MR REMARK 200 STARTING MODEL: PDB ENTRY 5AEN REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 10 MM TRIS-HCL, 25 REMARK 280 MM KCL, 4-8 MG/ML PROTEIN (PH8); PRECIPITATE SOLUTION: 0,15M REMARK 280 IMIDAZOL/HCL PH6.5; 0,1 M NAACETAT, 14% PEG8000, 5 MM YBCL3 AND REMARK 280 25 MM 5-CHLORO-3-HYDROXYPYRIDINE; HANGING DROP VAPOR-DIFFUSION REMARK 280 AT 290.55 K, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.16850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.15500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.49000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.15500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.16850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.49000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -14 REMARK 465 ALA A -13 REMARK 465 SER A -12 REMARK 465 MET A -11 REMARK 465 THR A -10 REMARK 465 GLY A -9 REMARK 465 GLY A -8 REMARK 465 GLN A -7 REMARK 465 GLN A -6 REMARK 465 MET A -5 REMARK 465 GLY A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 MET A 0 REMARK 465 PRO A 1 REMARK 465 GLU A 2 REMARK 465 ILE A 3 REMARK 465 LEU A 611 REMARK 465 GLU A 612 REMARK 465 HIS A 613 REMARK 465 HIS A 614 REMARK 465 HIS A 615 REMARK 465 HIS A 616 REMARK 465 HIS A 617 REMARK 465 HIS A 618 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 401 CD OE1 OE2 REMARK 470 ARG A 586 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2195 O HOH A 2283 2.14 REMARK 500 O HOH A 2202 O HOH A 2384 2.17 REMARK 500 O HOH A 2312 O HOH A 2313 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2036 O HOH A 2407 1565 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 79 60.17 -102.98 REMARK 500 SER A 80 -134.05 60.76 REMARK 500 GLU A 271 36.12 -78.53 REMARK 500 CYS A 274 -13.78 70.66 REMARK 500 LEU A 275 80.11 -153.31 REMARK 500 ASP A 286 13.56 -144.63 REMARK 500 TRP A 301 -63.17 -109.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 YB A1617 YB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 46 OE1 REMARK 620 2 GLU A 46 OE2 52.1 REMARK 620 3 ASP A 175 OD1 157.9 148.5 REMARK 620 4 ASP A 175 O 134.7 86.0 67.2 REMARK 620 5 HOH A2031 O 76.9 125.1 85.6 128.3 REMARK 620 6 HOH A2032 O 86.0 106.6 90.9 91.4 44.1 REMARK 620 7 HOH A2138 O 114.5 83.8 72.2 70.6 142.3 158.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 YB A2612 YB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 46 OE2 REMARK 620 2 GLU A 46 OE1 49.8 REMARK 620 3 ASP A 175 OD1 143.4 166.7 REMARK 620 4 ASP A 175 O 79.5 125.6 66.3 REMARK 620 5 HOH A2031 O 121.9 77.8 90.1 126.6 REMARK 620 6 HOH A2032 O 99.0 83.4 91.9 86.9 44.9 REMARK 620 7 HOH A2138 O 81.9 114.0 74.5 69.3 151.3 155.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 YB A1613 YB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 47 OD1 REMARK 620 2 ASP A 47 OD2 50.4 REMARK 620 3 ASP A 481 OD1 113.8 122.0 REMARK 620 4 ASP A 481 OD2 73.6 79.3 46.1 REMARK 620 5 HOH A2036 O 125.4 77.2 78.4 83.5 REMARK 620 6 HOH A2330 O 77.2 127.5 71.4 82.7 148.3 REMARK 620 7 HOH A2331 O 148.1 147.1 79.9 126.0 84.6 80.7 REMARK 620 8 HOH A2406 O 72.9 83.5 152.6 146.1 120.7 85.1 82.5 REMARK 620 9 HOH A2407 O 119.9 75.4 116.3 124.8 43.5 149.6 72.5 77.6 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 YB A1616 YB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 47 OD1 REMARK 620 2 ASP A 47 OD2 47.2 REMARK 620 3 ASP A 481 OD2 76.9 86.3 REMARK 620 4 ASP A 481 OD1 122.4 140.4 55.9 REMARK 620 5 HOH A2036 O 128.1 81.0 99.7 93.5 REMARK 620 6 HOH A2330 O 71.2 117.8 88.1 75.8 160.3 REMARK 620 7 HOH A2331 O 127.5 132.6 141.1 85.7 87.4 75.4 REMARK 620 8 HOH A2406 O 61.7 71.7 138.0 144.1 111.0 72.6 70.2 REMARK 620 9 HOH A2407 O 108.4 71.7 139.2 128.6 44.3 132.5 68.2 67.0 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 YB A1614 YB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 70 OE2 REMARK 620 2 GLU A 121 OE1 96.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1612 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 295 NE2 REMARK 620 2 HIS A 299 NE2 100.0 REMARK 620 3 GLU A 318 OE1 105.3 106.1 REMARK 620 4 ACT A1611 O 113.2 126.1 104.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 YB A1615 YB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 422 OD1 REMARK 620 2 ASP A 422 OD2 50.0 REMARK 620 3 ASP A 426 OD2 92.2 73.5 REMARK 620 4 ASP A 426 OD1 79.9 102.0 50.4 REMARK 620 5 HOH A2294 O 153.8 153.5 89.7 81.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YB A 2612 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1611 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1612 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YB A 1613 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YB A 1614 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YB A 1615 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YB A 1616 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YB A 1617 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD A 1618 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD A 1619 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD A 1620 DBREF 5FWQ A 0 610 UNP P09960 LKHA4_HUMAN 1 611 SEQADV 5FWQ MET A -14 UNP P09960 EXPRESSION TAG SEQADV 5FWQ ALA A -13 UNP P09960 EXPRESSION TAG SEQADV 5FWQ SER A -12 UNP P09960 EXPRESSION TAG SEQADV 5FWQ MET A -11 UNP P09960 EXPRESSION TAG SEQADV 5FWQ THR A -10 UNP P09960 EXPRESSION TAG SEQADV 5FWQ GLY A -9 UNP P09960 EXPRESSION TAG SEQADV 5FWQ GLY A -8 UNP P09960 EXPRESSION TAG SEQADV 5FWQ GLN A -7 UNP P09960 EXPRESSION TAG SEQADV 5FWQ GLN A -6 UNP P09960 EXPRESSION TAG SEQADV 5FWQ MET A -5 UNP P09960 EXPRESSION TAG SEQADV 5FWQ GLY A -4 UNP P09960 EXPRESSION TAG SEQADV 5FWQ ARG A -3 UNP P09960 EXPRESSION TAG SEQADV 5FWQ GLY A -2 UNP P09960 EXPRESSION TAG SEQADV 5FWQ SER A -1 UNP P09960 EXPRESSION TAG SEQADV 5FWQ LEU A 611 UNP P09960 EXPRESSION TAG SEQADV 5FWQ GLU A 612 UNP P09960 EXPRESSION TAG SEQADV 5FWQ HIS A 613 UNP P09960 EXPRESSION TAG SEQADV 5FWQ HIS A 614 UNP P09960 EXPRESSION TAG SEQADV 5FWQ HIS A 615 UNP P09960 EXPRESSION TAG SEQADV 5FWQ HIS A 616 UNP P09960 EXPRESSION TAG SEQADV 5FWQ HIS A 617 UNP P09960 EXPRESSION TAG SEQADV 5FWQ HIS A 618 UNP P09960 EXPRESSION TAG SEQRES 1 A 633 MET ALA SER MET THR GLY GLY GLN GLN MET GLY ARG GLY SEQRES 2 A 633 SER MET PRO GLU ILE VAL ASP THR CYS SER LEU ALA SER SEQRES 3 A 633 PRO ALA SER VAL CYS ARG THR LYS HIS LEU HIS LEU ARG SEQRES 4 A 633 CYS SER VAL ASP PHE THR ARG ARG THR LEU THR GLY THR SEQRES 5 A 633 ALA ALA LEU THR VAL GLN SER GLN GLU ASP ASN LEU ARG SEQRES 6 A 633 SER LEU VAL LEU ASP THR LYS ASP LEU THR ILE GLU LYS SEQRES 7 A 633 VAL VAL ILE ASN GLY GLN GLU VAL LYS TYR ALA LEU GLY SEQRES 8 A 633 GLU ARG GLN SER TYR LYS GLY SER PRO MET GLU ILE SER SEQRES 9 A 633 LEU PRO ILE ALA LEU SER LYS ASN GLN GLU ILE VAL ILE SEQRES 10 A 633 GLU ILE SER PHE GLU THR SER PRO LYS SER SER ALA LEU SEQRES 11 A 633 GLN TRP LEU THR PRO GLU GLN THR SER GLY LYS GLU HIS SEQRES 12 A 633 PRO TYR LEU PHE SER GLN CYS GLN ALA ILE HIS CYS ARG SEQRES 13 A 633 ALA ILE LEU PRO CYS GLN ASP THR PRO SER VAL LYS LEU SEQRES 14 A 633 THR TYR THR ALA GLU VAL SER VAL PRO LYS GLU LEU VAL SEQRES 15 A 633 ALA LEU MET SER ALA ILE ARG ASP GLY GLU THR PRO ASP SEQRES 16 A 633 PRO GLU ASP PRO SER ARG LYS ILE TYR LYS PHE ILE GLN SEQRES 17 A 633 LYS VAL PRO ILE PRO CYS TYR LEU ILE ALA LEU VAL VAL SEQRES 18 A 633 GLY ALA LEU GLU SER ARG GLN ILE GLY PRO ARG THR LEU SEQRES 19 A 633 VAL TRP SER GLU LYS GLU GLN VAL GLU LYS SER ALA TYR SEQRES 20 A 633 GLU PHE SER GLU THR GLU SER MET LEU LYS ILE ALA GLU SEQRES 21 A 633 ASP LEU GLY GLY PRO TYR VAL TRP GLY GLN TYR ASP LEU SEQRES 22 A 633 LEU VAL LEU PRO PRO SER PHE PRO TYR GLY GLY MET GLU SEQRES 23 A 633 ASN PRO CYS LEU THR PHE VAL THR PRO THR LEU LEU ALA SEQRES 24 A 633 GLY ASP LYS SER LEU SER ASN VAL ILE ALA HIS GLU ILE SEQRES 25 A 633 SER HIS SER TRP THR GLY ASN LEU VAL THR ASN LYS THR SEQRES 26 A 633 TRP ASP HIS PHE TRP LEU ASN GLU GLY HIS THR VAL TYR SEQRES 27 A 633 LEU GLU ARG HIS ILE CYS GLY ARG LEU PHE GLY GLU LYS SEQRES 28 A 633 PHE ARG HIS PHE ASN ALA LEU GLY GLY TRP GLY GLU LEU SEQRES 29 A 633 GLN ASN SER VAL LYS THR PHE GLY GLU THR HIS PRO PHE SEQRES 30 A 633 THR LYS LEU VAL VAL ASP LEU THR ASP ILE ASP PRO ASP SEQRES 31 A 633 VAL ALA TYR SER SER VAL PRO TYR GLU LYS GLY PHE ALA SEQRES 32 A 633 LEU LEU PHE TYR LEU GLU GLN LEU LEU GLY GLY PRO GLU SEQRES 33 A 633 ILE PHE LEU GLY PHE LEU LYS ALA TYR VAL GLU LYS PHE SEQRES 34 A 633 SER TYR LYS SER ILE THR THR ASP ASP TRP LYS ASP PHE SEQRES 35 A 633 LEU TYR SER TYR PHE LYS ASP LYS VAL ASP VAL LEU ASN SEQRES 36 A 633 GLN VAL ASP TRP ASN ALA TRP LEU TYR SER PRO GLY LEU SEQRES 37 A 633 PRO PRO ILE LYS PRO ASN TYR ASP MET THR LEU THR ASN SEQRES 38 A 633 ALA CYS ILE ALA LEU SER GLN ARG TRP ILE THR ALA LYS SEQRES 39 A 633 GLU ASP ASP LEU ASN SER PHE ASN ALA THR ASP LEU LYS SEQRES 40 A 633 ASP LEU SER SER HIS GLN LEU ASN GLU PHE LEU ALA GLN SEQRES 41 A 633 THR LEU GLN ARG ALA PRO LEU PRO LEU GLY HIS ILE LYS SEQRES 42 A 633 ARG MET GLN GLU VAL TYR ASN PHE ASN ALA ILE ASN ASN SEQRES 43 A 633 SER GLU ILE ARG PHE ARG TRP LEU ARG LEU CYS ILE GLN SEQRES 44 A 633 SER LYS TRP GLU ASP ALA ILE PRO LEU ALA LEU LYS MET SEQRES 45 A 633 ALA THR GLU GLN GLY ARG MET LYS PHE THR ARG PRO LEU SEQRES 46 A 633 PHE LYS ASP LEU ALA ALA PHE ASP LYS SER HIS ASP GLN SEQRES 47 A 633 ALA VAL ARG THR TYR GLN GLU HIS LYS ALA SER MET HIS SEQRES 48 A 633 PRO VAL THR ALA MET LEU VAL GLY LYS ASP LEU LYS VAL SEQRES 49 A 633 ASP LEU GLU HIS HIS HIS HIS HIS HIS HET ACT A1611 4 HET ZN A1612 1 HET YB A1613 1 HET YB A1614 1 HET YB A1615 1 HET YB A1616 1 HET YB A1617 1 HET IMD A1618 5 HET IMD A1619 5 HET IMD A1620 5 HET YB A2612 1 HETNAM ACT ACETATE ION HETNAM ZN ZINC ION HETNAM YB YTTERBIUM (III) ION HETNAM IMD IMIDAZOLE FORMUL 2 ACT C2 H3 O2 1- FORMUL 3 ZN ZN 2+ FORMUL 4 YB 6(YB 3+) FORMUL 9 IMD 3(C3 H5 N2 1+) FORMUL 13 HOH *407(H2 O) HELIX 1 1 GLN A 79 GLY A 83 5 5 HELIX 2 2 THR A 119 THR A 123 5 5 HELIX 3 3 HIS A 139 ILE A 143 5 5 HELIX 4 4 PRO A 198 ILE A 202 5 5 HELIX 5 5 GLU A 223 PHE A 234 1 12 HELIX 6 6 GLU A 236 GLY A 249 1 14 HELIX 7 7 PRO A 280 LEU A 283 5 4 HELIX 8 8 SER A 290 HIS A 299 1 10 HELIX 9 9 THR A 310 ASP A 312 5 3 HELIX 10 10 HIS A 313 GLY A 334 1 22 HELIX 11 11 GLY A 334 GLY A 357 1 24 HELIX 12 12 HIS A 360 LYS A 364 5 5 HELIX 13 13 ASP A 373 TYR A 378 1 6 HELIX 14 14 SER A 380 GLY A 398 1 19 HELIX 15 15 GLY A 399 SER A 415 1 17 HELIX 16 16 THR A 420 PHE A 432 1 13 HELIX 17 17 LYS A 435 ASN A 440 1 6 HELIX 18 18 ASP A 443 SER A 450 1 8 HELIX 19 19 THR A 465 ALA A 478 1 14 HELIX 20 20 LYS A 479 PHE A 486 5 8 HELIX 21 21 ASN A 487 LYS A 492 5 6 HELIX 22 22 SER A 495 GLN A 508 1 14 HELIX 23 23 PRO A 513 ASN A 525 1 13 HELIX 24 24 PHE A 526 ILE A 529 5 4 HELIX 25 25 ASN A 531 SER A 545 1 15 HELIX 26 26 TRP A 547 ASP A 549 5 3 HELIX 27 27 ALA A 550 GLN A 561 1 12 HELIX 28 28 ARG A 563 PHE A 577 1 15 HELIX 29 29 SER A 580 LYS A 592 1 13 HELIX 30 30 ALA A 593 MET A 595 5 3 HELIX 31 31 HIS A 596 LYS A 608 1 13 SHEET 1 AA 8 GLN A 69 GLU A 70 0 SHEET 2 AA 8 LEU A 59 ILE A 66 -1 O ILE A 66 N GLN A 69 SHEET 3 AA 8 GLU A 99 THR A 108 -1 O GLU A 103 N VAL A 65 SHEET 4 AA 8 THR A 33 SER A 44 -1 O LEU A 34 N THR A 108 SHEET 5 AA 8 CYS A 16 ASP A 28 -1 O ARG A 17 N GLN A 43 SHEET 6 AA 8 LEU A 154 PRO A 163 1 O THR A 155 N LEU A 21 SHEET 7 AA 8 ASP A 183 ILE A 197 -1 O LYS A 187 N VAL A 162 SHEET 8 AA 8 ILE A 173 ASP A 180 -1 O ILE A 173 N ILE A 192 SHEET 1 AB 3 LEU A 49 THR A 56 0 SHEET 2 AB 3 SER A 84 LEU A 94 -1 O SER A 84 N THR A 56 SHEET 3 AB 3 TYR A 73 LEU A 75 -1 O ALA A 74 N GLU A 87 SHEET 1 AC 4 LEU A 115 LEU A 118 0 SHEET 2 AC 4 TYR A 130 SER A 133 -1 O TYR A 130 N LEU A 118 SHEET 3 AC 4 LEU A 204 GLY A 207 -1 O LEU A 204 N SER A 133 SHEET 4 AC 4 VAL A 167 MET A 170 -1 O VAL A 167 N GLY A 207 SHEET 1 AD 5 GLU A 210 GLY A 215 0 SHEET 2 AD 5 THR A 218 SER A 222 -1 O THR A 218 N ILE A 214 SHEET 3 AD 5 ASP A 257 VAL A 260 1 O LEU A 258 N TRP A 221 SHEET 4 AD 5 LEU A 275 VAL A 278 1 O THR A 276 N LEU A 259 SHEET 5 AD 5 GLY A 269 MET A 270 -1 O MET A 270 N PHE A 277 SHEET 1 AE 2 THR A 307 ASN A 308 0 SHEET 2 AE 2 SER A 418 ILE A 419 1 N ILE A 419 O THR A 307 LINK OE1 GLU A 46 YB YB A1617 1555 1555 2.68 LINK OE2 GLU A 46 YB YB A1617 1555 1555 2.22 LINK OE2 GLU A 46 YB YB A2612 4455 1555 2.42 LINK OE1 GLU A 46 YB YB A2612 4455 1555 2.74 LINK OD1 ASP A 47 YB YB A1613 1545 1555 2.62 LINK OD2 ASP A 47 YB YB A1613 1545 1555 2.57 LINK OD1 ASP A 47 YB YB A1616 1555 1555 2.85 LINK OD2 ASP A 47 YB YB A1616 1555 1555 2.66 LINK OE2 GLU A 70 YB YB A1614 3544 1555 2.58 LINK OE1 GLU A 121 YB YB A1614 1555 1555 2.25 LINK OD1 ASP A 175 YB YB A1617 4555 1555 2.67 LINK O ASP A 175 YB YB A1617 4555 1555 2.93 LINK OD1 ASP A 175 YB YB A2612 1555 1555 2.54 LINK O ASP A 175 YB YB A2612 1555 1555 3.08 LINK NE2 HIS A 295 ZN ZN A1612 1555 1555 2.07 LINK NE2 HIS A 299 ZN ZN A1612 1555 1555 2.08 LINK OE1 GLU A 318 ZN ZN A1612 1555 1555 2.09 LINK OD1 ASP A 422 YB YB A1615 1555 1555 2.60 LINK OD2 ASP A 422 YB YB A1615 1555 1555 2.63 LINK OD2 ASP A 426 YB YB A1615 1555 1555 2.65 LINK OD1 ASP A 426 YB YB A1615 1555 1555 2.49 LINK OD1 ASP A 481 YB YB A1613 1555 1555 2.80 LINK OD2 ASP A 481 YB YB A1613 1555 1555 2.82 LINK OD2 ASP A 481 YB YB A1616 1565 1555 2.37 LINK OD1 ASP A 481 YB YB A1616 1565 1555 2.34 LINK O ACT A1611 ZN ZN A1612 1555 1555 2.02 LINK YB YB A1613 O HOH A2036 1555 1545 2.89 LINK YB YB A1613 O HOH A2330 1555 1555 2.69 LINK YB YB A1613 O HOH A2331 1555 1555 2.60 LINK YB YB A1613 O HOH A2406 1555 1555 2.46 LINK YB YB A1613 O HOH A2407 1555 1555 2.78 LINK YB YB A1615 O HOH A2294 1555 1555 2.40 LINK YB YB A1616 O HOH A2036 1555 1555 2.61 LINK YB YB A1616 O HOH A2330 1555 1565 2.85 LINK YB YB A1616 O HOH A2331 1555 1565 2.75 LINK YB YB A1616 O HOH A2406 1555 1565 3.03 LINK YB YB A1616 O HOH A2407 1555 1565 2.92 LINK YB YB A1617 O HOH A2031 1555 1555 3.12 LINK YB YB A1617 O HOH A2032 1555 1555 2.65 LINK YB YB A1617 O HOH A2138 1555 4555 3.20 LINK O HOH A2031 YB YB A2612 4455 1555 3.01 LINK O HOH A2032 YB YB A2612 4455 1555 2.73 LINK O HOH A2138 YB YB A2612 1555 1555 3.16 CISPEP 1 GLN A 136 ALA A 137 0 -0.79 CISPEP 2 ALA A 510 PRO A 511 0 0.37 SITE 1 AC1 4 GLU A 46 ASP A 175 HOH A2031 HOH A2032 SITE 1 AC2 9 GLY A 269 GLU A 271 HIS A 295 GLU A 296 SITE 2 AC2 9 HIS A 299 GLU A 318 TYR A 383 ZN A1612 SITE 3 AC2 9 HOH A2114 SITE 1 AC3 5 HIS A 295 HIS A 299 GLU A 318 TYR A 383 SITE 2 AC3 5 ACT A1611 SITE 1 AC4 7 ASP A 47 ASP A 481 HOH A2036 HOH A2330 SITE 2 AC4 7 HOH A2331 HOH A2406 HOH A2407 SITE 1 AC5 2 GLU A 70 GLU A 121 SITE 1 AC6 3 ASP A 422 ASP A 426 HOH A2294 SITE 1 AC7 7 ASP A 47 ASP A 481 HOH A2036 HOH A2330 SITE 2 AC7 7 HOH A2331 HOH A2406 HOH A2407 SITE 1 AC8 3 GLU A 46 ASP A 175 HOH A2032 SITE 1 AC9 6 GLN A 136 TYR A 267 PHE A 314 PRO A 374 SITE 2 AC9 6 ASP A 375 HOH A2265 SITE 1 BC1 4 TRP A 311 PHE A 314 ALA A 377 HOH A2265 SITE 1 BC2 6 GLY A 344 GLY A 347 GLU A 348 GLU A 501 SITE 2 BC2 6 ALA A 504 GLN A 508 CRYST1 76.337 86.980 96.310 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013100 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011497 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010383 0.00000