data_5G0F # _entry.id 5G0F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5G0F pdb_00005g0f 10.2210/pdb5g0f/pdb PDBE EBI-66422 ? ? WWPDB D_1290066422 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-07-27 2 'Structure model' 1 1 2016-08-10 3 'Structure model' 1 2 2016-09-28 4 'Structure model' 1 3 2019-01-23 5 'Structure model' 1 4 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' 10 5 'Structure model' Other 11 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_PDB_rev 2 4 'Structure model' database_PDB_rev_record 3 4 'Structure model' pdbx_database_proc 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 6 4 'Structure model' pdbx_validate_close_contact 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_conn_type 9 5 'Structure model' chem_comp_atom 10 5 'Structure model' chem_comp_bond 11 5 'Structure model' database_2 12 5 'Structure model' pdbx_database_status 13 5 'Structure model' pdbx_initial_refinement_model 14 5 'Structure model' pdbx_struct_conn_angle 15 5 'Structure model' struct_conn 16 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_database_status.recvd_author_approval' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_pdbx_database_status.status_code_sf' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 24 5 'Structure model' '_pdbx_struct_conn_angle.value' 25 5 'Structure model' '_struct_conn.pdbx_dist_value' 26 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 5 'Structure model' '_struct_conn.ptnr1_symmetry' 33 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 5 'Structure model' '_struct_conn.ptnr2_symmetry' 40 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 41 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 42 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5G0F _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2016-03-18 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 5G0G unspecified 'CRYSTAL STRUCTURE OF DANIO RERIO HDAC6 CD1 IN COMPLEX WITH TRICHOSTATIN A' PDB 5G0H unspecified 'CRYSTAL STRUCTURE OF DANIO RERIO HDAC6 CD2 IN COMPLEX WITH (S)-TRICHOSTATIN A' PDB 5G0I unspecified 'CRYSTAL STRUCTURE OF DANIO RERIO HDAC6 CD1 AND CD2 ( LINKER CLEAVED) IN COMPLEX WITH NEXTURASTAT A' PDB 5G0J unspecified 'CRYSTAL STRUCTURE OF DANIO RERIO HDAC6 CD1 AND CD2 ( LINKER INTACT) IN COMPLEX WITH NEXTURASTAT A' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Miyake, Y.' 1 'Keusch, J.J.' 2 'Wang, L.' 3 'Saito, M.' 4 'Hess, D.' 5 'Wang, X.' 6 'Melancon, B.J.' 7 'Helquist, P.' 8 'Gut, H.' 9 'Matthias, P.' 10 # _citation.id primary _citation.title 'Structural Insights Into Hdac6 Tubulin Deacetylation and its Selective Inhibition' _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_volume 12 _citation.page_first 748 _citation.page_last ? _citation.year 2016 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1552-4450 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 27454931 _citation.pdbx_database_id_DOI 10.1038/NCHEMBIO.2140 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Miyake, Y.' 1 ? primary 'Keusch, J.J.' 2 ? primary 'Wang, L.' 3 ? primary 'Saito, M.' 4 ? primary 'Hess, D.' 5 ? primary 'Wang, X.' 6 ? primary 'Melancon, B.J.' 7 ? primary 'Helquist, P.' 8 ? primary 'Gut, H.' 9 ? primary 'Matthias, P.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man HDAC6 12232.913 1 ? ? 'ZNF-UBP DOMAIN, UNP RESIDUES 972-1081' ? 2 non-polymer syn GLYCINE 75.067 2 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 4 non-polymer syn 'NICKEL (II) ION' 58.693 2 ? ? ? ? 5 water nat water 18.015 161 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPDPLPWCPHLESVRPVPAGGIDVFQPCEECGGEAENWICLFCYKVLCGRYVNQHMVTHGQESGHPVVLSFADLSVWCYA CESYVHNKVLHEAKNAAHLVKFGEGIHPFN ; _entity_poly.pdbx_seq_one_letter_code_can ;GPDPLPWCPHLESVRPVPAGGIDVFQPCEECGGEAENWICLFCYKVLCGRYVNQHMVTHGQESGHPVVLSFADLSVWCYA CESYVHNKVLHEAKNAAHLVKFGEGIHPFN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCINE GLY 3 'ZINC ION' ZN 4 'NICKEL (II) ION' NI 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 ASP n 1 4 PRO n 1 5 LEU n 1 6 PRO n 1 7 TRP n 1 8 CYS n 1 9 PRO n 1 10 HIS n 1 11 LEU n 1 12 GLU n 1 13 SER n 1 14 VAL n 1 15 ARG n 1 16 PRO n 1 17 VAL n 1 18 PRO n 1 19 ALA n 1 20 GLY n 1 21 GLY n 1 22 ILE n 1 23 ASP n 1 24 VAL n 1 25 PHE n 1 26 GLN n 1 27 PRO n 1 28 CYS n 1 29 GLU n 1 30 GLU n 1 31 CYS n 1 32 GLY n 1 33 GLY n 1 34 GLU n 1 35 ALA n 1 36 GLU n 1 37 ASN n 1 38 TRP n 1 39 ILE n 1 40 CYS n 1 41 LEU n 1 42 PHE n 1 43 CYS n 1 44 TYR n 1 45 LYS n 1 46 VAL n 1 47 LEU n 1 48 CYS n 1 49 GLY n 1 50 ARG n 1 51 TYR n 1 52 VAL n 1 53 ASN n 1 54 GLN n 1 55 HIS n 1 56 MET n 1 57 VAL n 1 58 THR n 1 59 HIS n 1 60 GLY n 1 61 GLN n 1 62 GLU n 1 63 SER n 1 64 GLY n 1 65 HIS n 1 66 PRO n 1 67 VAL n 1 68 VAL n 1 69 LEU n 1 70 SER n 1 71 PHE n 1 72 ALA n 1 73 ASP n 1 74 LEU n 1 75 SER n 1 76 VAL n 1 77 TRP n 1 78 CYS n 1 79 TYR n 1 80 ALA n 1 81 CYS n 1 82 GLU n 1 83 SER n 1 84 TYR n 1 85 VAL n 1 86 HIS n 1 87 ASN n 1 88 LYS n 1 89 VAL n 1 90 LEU n 1 91 HIS n 1 92 GLU n 1 93 ALA n 1 94 LYS n 1 95 ASN n 1 96 ALA n 1 97 ALA n 1 98 HIS n 1 99 LEU n 1 100 VAL n 1 101 LYS n 1 102 PHE n 1 103 GLY n 1 104 GLU n 1 105 GLY n 1 106 ILE n 1 107 HIS n 1 108 PRO n 1 109 PHE n 1 110 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ZEBRAFISH _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'DANIO RERIO' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7955 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name POPINF _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 972 972 GLY GLY A . n A 1 2 PRO 2 973 973 PRO PRO A . n A 1 3 ASP 3 974 974 ASP ASP A . n A 1 4 PRO 4 975 975 PRO PRO A . n A 1 5 LEU 5 976 976 LEU LEU A . n A 1 6 PRO 6 977 977 PRO PRO A . n A 1 7 TRP 7 978 978 TRP TRP A . n A 1 8 CYS 8 979 979 CYS CYS A . n A 1 9 PRO 9 980 980 PRO PRO A . n A 1 10 HIS 10 981 981 HIS HIS A . n A 1 11 LEU 11 982 982 LEU LEU A . n A 1 12 GLU 12 983 983 GLU GLU A . n A 1 13 SER 13 984 984 SER SER A . n A 1 14 VAL 14 985 985 VAL VAL A . n A 1 15 ARG 15 986 986 ARG ARG A . n A 1 16 PRO 16 987 987 PRO PRO A . n A 1 17 VAL 17 988 988 VAL VAL A . n A 1 18 PRO 18 989 989 PRO PRO A . n A 1 19 ALA 19 990 990 ALA ALA A . n A 1 20 GLY 20 991 991 GLY GLY A . n A 1 21 GLY 21 992 992 GLY GLY A . n A 1 22 ILE 22 993 993 ILE ILE A . n A 1 23 ASP 23 994 994 ASP ASP A . n A 1 24 VAL 24 995 995 VAL VAL A . n A 1 25 PHE 25 996 996 PHE PHE A . n A 1 26 GLN 26 997 997 GLN GLN A . n A 1 27 PRO 27 998 998 PRO PRO A . n A 1 28 CYS 28 999 999 CYS CYS A . n A 1 29 GLU 29 1000 1000 GLU GLU A . n A 1 30 GLU 30 1001 1001 GLU GLU A . n A 1 31 CYS 31 1002 1002 CYS CYS A . n A 1 32 GLY 32 1003 1003 GLY GLY A . n A 1 33 GLY 33 1004 1004 GLY GLY A . n A 1 34 GLU 34 1005 1005 GLU GLU A . n A 1 35 ALA 35 1006 1006 ALA ALA A . n A 1 36 GLU 36 1007 1007 GLU GLU A . n A 1 37 ASN 37 1008 1008 ASN ASN A . n A 1 38 TRP 38 1009 1009 TRP TRP A . n A 1 39 ILE 39 1010 1010 ILE ILE A . n A 1 40 CYS 40 1011 1011 CYS CYS A . n A 1 41 LEU 41 1012 1012 LEU LEU A . n A 1 42 PHE 42 1013 1013 PHE PHE A . n A 1 43 CYS 43 1014 1014 CYS CYS A . n A 1 44 TYR 44 1015 1015 TYR TYR A . n A 1 45 LYS 45 1016 1016 LYS LYS A . n A 1 46 VAL 46 1017 1017 VAL VAL A . n A 1 47 LEU 47 1018 1018 LEU LEU A . n A 1 48 CYS 48 1019 1019 CYS CYS A . n A 1 49 GLY 49 1020 1020 GLY GLY A . n A 1 50 ARG 50 1021 1021 ARG ARG A . n A 1 51 TYR 51 1022 1022 TYR TYR A . n A 1 52 VAL 52 1023 1023 VAL VAL A . n A 1 53 ASN 53 1024 1024 ASN ASN A . n A 1 54 GLN 54 1025 1025 GLN GLN A . n A 1 55 HIS 55 1026 1026 HIS HIS A . n A 1 56 MET 56 1027 1027 MET MET A . n A 1 57 VAL 57 1028 1028 VAL VAL A . n A 1 58 THR 58 1029 1029 THR THR A . n A 1 59 HIS 59 1030 1030 HIS HIS A . n A 1 60 GLY 60 1031 1031 GLY GLY A . n A 1 61 GLN 61 1032 1032 GLN GLN A . n A 1 62 GLU 62 1033 1033 GLU GLU A . n A 1 63 SER 63 1034 1034 SER SER A . n A 1 64 GLY 64 1035 1035 GLY GLY A . n A 1 65 HIS 65 1036 1036 HIS HIS A . n A 1 66 PRO 66 1037 1037 PRO PRO A . n A 1 67 VAL 67 1038 1038 VAL VAL A . n A 1 68 VAL 68 1039 1039 VAL VAL A . n A 1 69 LEU 69 1040 1040 LEU LEU A . n A 1 70 SER 70 1041 1041 SER SER A . n A 1 71 PHE 71 1042 1042 PHE PHE A . n A 1 72 ALA 72 1043 1043 ALA ALA A . n A 1 73 ASP 73 1044 1044 ASP ASP A . n A 1 74 LEU 74 1045 1045 LEU LEU A . n A 1 75 SER 75 1046 1046 SER SER A . n A 1 76 VAL 76 1047 1047 VAL VAL A . n A 1 77 TRP 77 1048 1048 TRP TRP A . n A 1 78 CYS 78 1049 1049 CYS CYS A . n A 1 79 TYR 79 1050 1050 TYR TYR A . n A 1 80 ALA 80 1051 1051 ALA ALA A . n A 1 81 CYS 81 1052 1052 CYS CYS A . n A 1 82 GLU 82 1053 1053 GLU GLU A . n A 1 83 SER 83 1054 1054 SER SER A . n A 1 84 TYR 84 1055 1055 TYR TYR A . n A 1 85 VAL 85 1056 1056 VAL VAL A . n A 1 86 HIS 86 1057 1057 HIS HIS A . n A 1 87 ASN 87 1058 1058 ASN ASN A . n A 1 88 LYS 88 1059 1059 LYS LYS A . n A 1 89 VAL 89 1060 1060 VAL VAL A . n A 1 90 LEU 90 1061 1061 LEU LEU A . n A 1 91 HIS 91 1062 1062 HIS HIS A . n A 1 92 GLU 92 1063 1063 GLU GLU A . n A 1 93 ALA 93 1064 1064 ALA ALA A . n A 1 94 LYS 94 1065 1065 LYS LYS A . n A 1 95 ASN 95 1066 1066 ASN ASN A . n A 1 96 ALA 96 1067 1067 ALA ALA A . n A 1 97 ALA 97 1068 1068 ALA ALA A . n A 1 98 HIS 98 1069 1069 HIS HIS A . n A 1 99 LEU 99 1070 1070 LEU LEU A . n A 1 100 VAL 100 1071 1071 VAL VAL A . n A 1 101 LYS 101 1072 1072 LYS LYS A . n A 1 102 PHE 102 1073 1073 PHE PHE A . n A 1 103 GLY 103 1074 1074 GLY GLY A . n A 1 104 GLU 104 1075 1075 GLU GLU A . n A 1 105 GLY 105 1076 1076 GLY GLY A . n A 1 106 ILE 106 1077 1077 ILE ILE A . n A 1 107 HIS 107 1078 1078 HIS HIS A . n A 1 108 PRO 108 1079 1079 PRO PRO A . n A 1 109 PHE 109 1080 1080 PHE PHE A . n A 1 110 ASN 110 1081 1081 ASN ASN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLY 1 2087 2087 GLY GLY A . C 2 GLY 1 2088 2088 GLY GLY A . D 3 ZN 1 2082 2082 ZN ZN A . E 3 ZN 1 2083 2083 ZN ZN A . F 3 ZN 1 2084 2084 ZN ZN A . G 4 NI 1 2085 2085 NI NI A . H 4 NI 1 2086 2086 NI NI A . I 5 HOH 1 3001 3001 HOH HOH A . I 5 HOH 2 3002 3002 HOH HOH A . I 5 HOH 3 3003 3003 HOH HOH A . I 5 HOH 4 3004 3004 HOH HOH A . I 5 HOH 5 3005 3005 HOH HOH A . I 5 HOH 6 3006 3006 HOH HOH A . I 5 HOH 7 3007 3007 HOH HOH A . I 5 HOH 8 3008 3008 HOH HOH A . I 5 HOH 9 3009 3009 HOH HOH A . I 5 HOH 10 3010 3010 HOH HOH A . I 5 HOH 11 3011 3011 HOH HOH A . I 5 HOH 12 3012 3012 HOH HOH A . I 5 HOH 13 3013 3013 HOH HOH A . I 5 HOH 14 3014 3014 HOH HOH A . I 5 HOH 15 3015 3015 HOH HOH A . I 5 HOH 16 3016 3016 HOH HOH A . I 5 HOH 17 3017 3017 HOH HOH A . I 5 HOH 18 3018 3018 HOH HOH A . I 5 HOH 19 3019 3019 HOH HOH A . I 5 HOH 20 3020 3020 HOH HOH A . I 5 HOH 21 3021 3021 HOH HOH A . I 5 HOH 22 3022 3022 HOH HOH A . I 5 HOH 23 3023 3023 HOH HOH A . I 5 HOH 24 3024 3024 HOH HOH A . I 5 HOH 25 3025 3025 HOH HOH A . I 5 HOH 26 3026 3026 HOH HOH A . I 5 HOH 27 3027 3027 HOH HOH A . I 5 HOH 28 3028 3028 HOH HOH A . I 5 HOH 29 3029 3029 HOH HOH A . I 5 HOH 30 3030 3030 HOH HOH A . I 5 HOH 31 3031 3031 HOH HOH A . I 5 HOH 32 3032 3032 HOH HOH A . I 5 HOH 33 3033 3033 HOH HOH A . I 5 HOH 34 3034 3034 HOH HOH A . I 5 HOH 35 3035 3035 HOH HOH A . I 5 HOH 36 3036 3036 HOH HOH A . I 5 HOH 37 3037 3037 HOH HOH A . I 5 HOH 38 3038 3038 HOH HOH A . I 5 HOH 39 3039 3039 HOH HOH A . I 5 HOH 40 3040 3040 HOH HOH A . I 5 HOH 41 3041 3041 HOH HOH A . I 5 HOH 42 3042 3042 HOH HOH A . I 5 HOH 43 3043 3043 HOH HOH A . I 5 HOH 44 3044 3044 HOH HOH A . I 5 HOH 45 3045 3045 HOH HOH A . I 5 HOH 46 3046 3046 HOH HOH A . I 5 HOH 47 3047 3047 HOH HOH A . I 5 HOH 48 3048 3048 HOH HOH A . I 5 HOH 49 3049 3049 HOH HOH A . I 5 HOH 50 3050 3050 HOH HOH A . I 5 HOH 51 3051 3051 HOH HOH A . I 5 HOH 52 3052 3052 HOH HOH A . I 5 HOH 53 3053 3053 HOH HOH A . I 5 HOH 54 3054 3054 HOH HOH A . I 5 HOH 55 3055 3055 HOH HOH A . I 5 HOH 56 3056 3056 HOH HOH A . I 5 HOH 57 3057 3057 HOH HOH A . I 5 HOH 58 3058 3058 HOH HOH A . I 5 HOH 59 3059 3059 HOH HOH A . I 5 HOH 60 3060 3060 HOH HOH A . I 5 HOH 61 3061 3061 HOH HOH A . I 5 HOH 62 3062 3062 HOH HOH A . I 5 HOH 63 3063 3063 HOH HOH A . I 5 HOH 64 3064 3064 HOH HOH A . I 5 HOH 65 3065 3065 HOH HOH A . I 5 HOH 66 3066 3066 HOH HOH A . I 5 HOH 67 3067 3067 HOH HOH A . I 5 HOH 68 3068 3068 HOH HOH A . I 5 HOH 69 3069 3069 HOH HOH A . I 5 HOH 70 3070 3070 HOH HOH A . I 5 HOH 71 3071 3071 HOH HOH A . I 5 HOH 72 3072 3072 HOH HOH A . I 5 HOH 73 3073 3073 HOH HOH A . I 5 HOH 74 3074 3074 HOH HOH A . I 5 HOH 75 3075 3075 HOH HOH A . I 5 HOH 76 3076 3076 HOH HOH A . I 5 HOH 77 3077 3077 HOH HOH A . I 5 HOH 78 3078 3078 HOH HOH A . I 5 HOH 79 3079 3079 HOH HOH A . I 5 HOH 80 3080 3080 HOH HOH A . I 5 HOH 81 3081 3081 HOH HOH A . I 5 HOH 82 3082 3082 HOH HOH A . I 5 HOH 83 3083 3083 HOH HOH A . I 5 HOH 84 3084 3084 HOH HOH A . I 5 HOH 85 3085 3085 HOH HOH A . I 5 HOH 86 3086 3086 HOH HOH A . I 5 HOH 87 3087 3087 HOH HOH A . I 5 HOH 88 3088 3088 HOH HOH A . I 5 HOH 89 3089 3089 HOH HOH A . I 5 HOH 90 3090 3090 HOH HOH A . I 5 HOH 91 3091 3091 HOH HOH A . I 5 HOH 92 3092 3092 HOH HOH A . I 5 HOH 93 3093 3093 HOH HOH A . I 5 HOH 94 3094 3094 HOH HOH A . I 5 HOH 95 3095 3095 HOH HOH A . I 5 HOH 96 3096 3096 HOH HOH A . I 5 HOH 97 3097 3097 HOH HOH A . I 5 HOH 98 3098 3098 HOH HOH A . I 5 HOH 99 3099 3099 HOH HOH A . I 5 HOH 100 3100 3100 HOH HOH A . I 5 HOH 101 3101 3101 HOH HOH A . I 5 HOH 102 3102 3102 HOH HOH A . I 5 HOH 103 3103 3103 HOH HOH A . I 5 HOH 104 3104 3104 HOH HOH A . I 5 HOH 105 3105 3105 HOH HOH A . I 5 HOH 106 3106 3106 HOH HOH A . I 5 HOH 107 3107 3107 HOH HOH A . I 5 HOH 108 3108 3108 HOH HOH A . I 5 HOH 109 3109 3109 HOH HOH A . I 5 HOH 110 3110 3110 HOH HOH A . I 5 HOH 111 3111 3111 HOH HOH A . I 5 HOH 112 3112 3112 HOH HOH A . I 5 HOH 113 3113 3113 HOH HOH A . I 5 HOH 114 3114 3114 HOH HOH A . I 5 HOH 115 3115 3115 HOH HOH A . I 5 HOH 116 3116 3116 HOH HOH A . I 5 HOH 117 3117 3117 HOH HOH A . I 5 HOH 118 3118 3118 HOH HOH A . I 5 HOH 119 3119 3119 HOH HOH A . I 5 HOH 120 3120 3120 HOH HOH A . I 5 HOH 121 3121 3121 HOH HOH A . I 5 HOH 122 3122 3122 HOH HOH A . I 5 HOH 123 3123 3123 HOH HOH A . I 5 HOH 124 3124 3124 HOH HOH A . I 5 HOH 125 3125 3125 HOH HOH A . I 5 HOH 126 3126 3126 HOH HOH A . I 5 HOH 127 3127 3127 HOH HOH A . I 5 HOH 128 3128 3128 HOH HOH A . I 5 HOH 129 3129 3129 HOH HOH A . I 5 HOH 130 3130 3130 HOH HOH A . I 5 HOH 131 3131 3131 HOH HOH A . I 5 HOH 132 3132 3132 HOH HOH A . I 5 HOH 133 3133 3133 HOH HOH A . I 5 HOH 134 3134 3134 HOH HOH A . I 5 HOH 135 3135 3135 HOH HOH A . I 5 HOH 136 3136 3136 HOH HOH A . I 5 HOH 137 3137 3137 HOH HOH A . I 5 HOH 138 3138 3138 HOH HOH A . I 5 HOH 139 3139 3139 HOH HOH A . I 5 HOH 140 3140 3140 HOH HOH A . I 5 HOH 141 3141 3141 HOH HOH A . I 5 HOH 142 3142 3142 HOH HOH A . I 5 HOH 143 3143 3143 HOH HOH A . I 5 HOH 144 3144 3144 HOH HOH A . I 5 HOH 145 3145 3145 HOH HOH A . I 5 HOH 146 3146 3146 HOH HOH A . I 5 HOH 147 3147 3147 HOH HOH A . I 5 HOH 148 3148 3148 HOH HOH A . I 5 HOH 149 3149 3149 HOH HOH A . I 5 HOH 150 3150 3150 HOH HOH A . I 5 HOH 151 3151 3151 HOH HOH A . I 5 HOH 152 3152 3152 HOH HOH A . I 5 HOH 153 3153 3153 HOH HOH A . I 5 HOH 154 3154 3154 HOH HOH A . I 5 HOH 155 3155 3155 HOH HOH A . I 5 HOH 156 3156 3156 HOH HOH A . I 5 HOH 157 3157 3157 HOH HOH A . I 5 HOH 158 3158 3158 HOH HOH A . I 5 HOH 159 3159 3159 HOH HOH A . I 5 HOH 160 3160 3160 HOH HOH A . I 5 HOH 161 3161 3161 HOH HOH A . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag N _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id GLY _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 2087 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id OXT _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id B _pdbx_unobs_or_zero_occ_atoms.label_comp_id GLY _pdbx_unobs_or_zero_occ_atoms.label_seq_id 1 _pdbx_unobs_or_zero_occ_atoms.label_atom_id OXT # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal BUSTER refinement 2.11.5 ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 5G0F _cell.length_a 100.740 _cell.length_b 100.740 _cell.length_c 100.740 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5G0F _symmetry.space_group_name_H-M 'I 2 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 # _exptl.entry_id 5G0F _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.5 _exptl_crystal.density_percent_sol 65 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1M LI2SO4, 5M NICL2, 0.1M TRIS PH 8.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 2M' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06DA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06DA _diffrn_source.pdbx_wavelength 1.000 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5G0F _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.90 _reflns.number_obs 12942 _reflns.number_all ? _reflns.percent_possible_obs 95.8 _reflns.pdbx_Rmerge_I_obs 0.13 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 6.85 _reflns.B_iso_Wilson_estimate 25.27 _reflns.pdbx_redundancy 2.9 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.95 _reflns_shell.percent_possible_all 97.2 _reflns_shell.Rmerge_I_obs 0.88 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.23 _reflns_shell.pdbx_redundancy 2.8 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5G0F _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 12942 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.13 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 95.35 _refine.ls_R_factor_obs 0.1805 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1787 _refine.ls_R_factor_R_free 0.2147 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.95 _refine.ls_number_reflns_R_free 641 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.9473 _refine.correlation_coeff_Fo_to_Fc_free 0.9133 _refine.B_iso_mean 27.84 _refine.aniso_B[1][1] 0.0000 _refine.aniso_B[2][2] 0.0000 _refine.aniso_B[3][3] 0.0000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3C5K' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI 0.118 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.117 _refine.pdbx_overall_SU_R_Blow_DPI 0.130 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.124 # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 5G0F _refine_analyze.Luzzati_coordinate_error_obs 0.212 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 859 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 161 _refine_hist.number_atoms_total 1034 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 41.13 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.010 ? 2.00 906 'X-RAY DIFFRACTION' HARMONIC t_angle_deg 0.97 ? 2.00 1238 'X-RAY DIFFRACTION' HARMONIC t_dihedral_angle_d ? ? 2.00 282 'X-RAY DIFFRACTION' SINUSOIDAL t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? 2.00 22 'X-RAY DIFFRACTION' HARMONIC t_gen_planes ? ? 5.00 134 'X-RAY DIFFRACTION' HARMONIC t_it ? ? 20.00 906 'X-RAY DIFFRACTION' HARMONIC t_nbd ? ? 5.00 0 'X-RAY DIFFRACTION' SEMIHARMONIC t_omega_torsion 3.73 ? ? ? 'X-RAY DIFFRACTION' ? t_other_torsion 19.00 ? ? ? 'X-RAY DIFFRACTION' ? t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion ? ? 5.00 105 'X-RAY DIFFRACTION' SEMIHARMONIC t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact ? ? 4.00 1208 'X-RAY DIFFRACTION' SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 7 _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 2.05 _refine_ls_shell.number_reflns_R_work 2504 _refine_ls_shell.R_factor_R_work 0.2421 _refine_ls_shell.percent_reflns_obs 95.35 _refine_ls_shell.R_factor_R_free 0.2448 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 4.79 _refine_ls_shell.number_reflns_R_free 126 _refine_ls_shell.number_reflns_all 2630 _refine_ls_shell.R_factor_all 0.2423 # _database_PDB_matrix.entry_id 5G0F _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 5G0F _struct.title 'Crystal structure of Danio rerio HDAC6 ZnF-UBP domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5G0F _struct_keywords.pdbx_keywords 'CELL CYCLE' _struct_keywords.text 'CELL CYCLE, UBIQUITIN, UBIQUITIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code F8W4B7_DANRE _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession F8W4B7 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5G0F _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 110 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession F8W4B7 _struct_ref_seq.db_align_beg 974 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1081 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 974 _struct_ref_seq.pdbx_auth_seq_align_end 1081 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5G0F GLY A 1 ? UNP F8W4B7 ? ? 'expression tag' 972 1 1 5G0F PRO A 2 ? UNP F8W4B7 ? ? 'expression tag' 973 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 10 ? VAL A 14 ? HIS A 981 VAL A 985 5 ? 5 HELX_P HELX_P2 2 GLN A 54 ? GLY A 64 ? GLN A 1025 GLY A 1035 1 ? 11 HELX_P HELX_P3 3 ASN A 87 ? VAL A 89 ? ASN A 1058 VAL A 1060 5 ? 3 HELX_P HELX_P4 4 LEU A 90 ? GLY A 103 ? LEU A 1061 GLY A 1074 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLY 1 O ? ? ? 3_556 G NI . NI ? ? A GLY 972 A NI 2085 1_555 ? ? ? ? ? ? ? 2.039 ? ? metalc2 metalc ? ? A CYS 8 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 979 A ZN 2082 1_555 ? ? ? ? ? ? ? 2.362 ? ? metalc3 metalc ? ? A HIS 10 ND1 ? ? ? 1_555 D ZN . ZN ? ? A HIS 981 A ZN 2082 1_555 ? ? ? ? ? ? ? 2.171 ? ? metalc4 metalc ? ? A CYS 28 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 999 A ZN 2084 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc5 metalc ? ? A CYS 31 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 1002 A ZN 2084 1_555 ? ? ? ? ? ? ? 2.335 ? ? metalc6 metalc ? ? A CYS 40 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 1011 A ZN 2083 1_555 ? ? ? ? ? ? ? 2.339 ? ? metalc7 metalc ? ? A CYS 43 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 1014 A ZN 2083 1_555 ? ? ? ? ? ? ? 2.460 ? ? metalc8 metalc ? ? A CYS 48 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 1019 A ZN 2084 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc9 metalc ? ? A HIS 55 ND1 ? ? ? 1_555 F ZN . ZN ? ? A HIS 1026 A ZN 2084 1_555 ? ? ? ? ? ? ? 1.951 ? ? metalc10 metalc ? ? A HIS 59 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 1030 A ZN 2083 1_555 ? ? ? ? ? ? ? 2.034 ? ? metalc11 metalc ? ? A HIS 65 ND1 ? ? ? 1_555 E ZN . ZN ? ? A HIS 1036 A ZN 2083 1_555 ? ? ? ? ? ? ? 2.105 ? ? metalc12 metalc ? ? A CYS 78 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 1049 A ZN 2082 1_555 ? ? ? ? ? ? ? 2.239 ? ? metalc13 metalc ? ? A CYS 81 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 1052 A ZN 2082 1_555 ? ? ? ? ? ? ? 2.455 ? ? metalc14 metalc ? ? A HIS 86 NE2 ? ? ? 1_555 H NI . NI ? ? A HIS 1057 A NI 2086 1_555 ? ? ? ? ? ? ? 1.944 ? ? metalc15 metalc ? ? A HIS 91 NE2 ? ? ? 1_555 H NI . NI ? ? A HIS 1062 A NI 2086 1_555 ? ? ? ? ? ? ? 2.112 ? ? metalc16 metalc ? ? A HIS 98 NE2 ? ? ? 1_555 G NI . NI ? ? A HIS 1069 A NI 2085 1_555 ? ? ? ? ? ? ? 2.125 ? ? metalc17 metalc ? ? G NI . NI ? ? ? 1_555 I HOH . O ? ? A NI 2085 A HOH 3146 1_555 ? ? ? ? ? ? ? 2.177 ? ? metalc18 metalc ? ? G NI . NI ? ? ? 1_555 I HOH . O ? ? A NI 2085 A HOH 3147 1_555 ? ? ? ? ? ? ? 2.327 ? ? metalc19 metalc ? ? G NI . NI ? ? ? 1_555 I HOH . O ? ? A NI 2085 A HOH 3158 1_555 ? ? ? ? ? ? ? 2.264 ? ? metalc20 metalc ? ? H NI . NI ? ? ? 1_555 I HOH . O ? ? A NI 2086 A HOH 3130 1_555 ? ? ? ? ? ? ? 2.683 ? ? metalc21 metalc ? ? H NI . NI ? ? ? 1_555 I HOH . O ? ? A NI 2086 A HOH 3131 1_555 ? ? ? ? ? ? ? 2.719 ? ? metalc22 metalc ? ? H NI . NI ? ? ? 1_555 I HOH . O ? ? A NI 2086 A HOH 3132 1_555 ? ? ? ? ? ? ? 2.236 ? ? metalc23 metalc ? ? H NI . NI ? ? ? 1_555 I HOH . O ? ? A NI 2086 A HOH 3138 1_555 ? ? ? ? ? ? ? 2.290 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLY 1 ? A GLY 972 ? 3_556 NI ? G NI . ? A NI 2085 ? 1_555 NE2 ? A HIS 98 ? A HIS 1069 ? 1_555 89.9 ? 2 O ? A GLY 1 ? A GLY 972 ? 3_556 NI ? G NI . ? A NI 2085 ? 1_555 O ? I HOH . ? A HOH 3146 ? 1_555 176.7 ? 3 NE2 ? A HIS 98 ? A HIS 1069 ? 1_555 NI ? G NI . ? A NI 2085 ? 1_555 O ? I HOH . ? A HOH 3146 ? 1_555 92.6 ? 4 O ? A GLY 1 ? A GLY 972 ? 3_556 NI ? G NI . ? A NI 2085 ? 1_555 O ? I HOH . ? A HOH 3147 ? 1_555 89.3 ? 5 NE2 ? A HIS 98 ? A HIS 1069 ? 1_555 NI ? G NI . ? A NI 2085 ? 1_555 O ? I HOH . ? A HOH 3147 ? 1_555 93.9 ? 6 O ? I HOH . ? A HOH 3146 ? 1_555 NI ? G NI . ? A NI 2085 ? 1_555 O ? I HOH . ? A HOH 3147 ? 1_555 88.4 ? 7 O ? A GLY 1 ? A GLY 972 ? 3_556 NI ? G NI . ? A NI 2085 ? 1_555 O ? I HOH . ? A HOH 3158 ? 1_555 93.2 ? 8 NE2 ? A HIS 98 ? A HIS 1069 ? 1_555 NI ? G NI . ? A NI 2085 ? 1_555 O ? I HOH . ? A HOH 3158 ? 1_555 175.9 ? 9 O ? I HOH . ? A HOH 3146 ? 1_555 NI ? G NI . ? A NI 2085 ? 1_555 O ? I HOH . ? A HOH 3158 ? 1_555 84.2 ? 10 O ? I HOH . ? A HOH 3147 ? 1_555 NI ? G NI . ? A NI 2085 ? 1_555 O ? I HOH . ? A HOH 3158 ? 1_555 83.3 ? 11 SG ? A CYS 8 ? A CYS 979 ? 1_555 ZN ? D ZN . ? A ZN 2082 ? 1_555 ND1 ? A HIS 10 ? A HIS 981 ? 1_555 110.0 ? 12 SG ? A CYS 8 ? A CYS 979 ? 1_555 ZN ? D ZN . ? A ZN 2082 ? 1_555 SG ? A CYS 78 ? A CYS 1049 ? 1_555 113.8 ? 13 ND1 ? A HIS 10 ? A HIS 981 ? 1_555 ZN ? D ZN . ? A ZN 2082 ? 1_555 SG ? A CYS 78 ? A CYS 1049 ? 1_555 107.3 ? 14 SG ? A CYS 8 ? A CYS 979 ? 1_555 ZN ? D ZN . ? A ZN 2082 ? 1_555 SG ? A CYS 81 ? A CYS 1052 ? 1_555 107.1 ? 15 ND1 ? A HIS 10 ? A HIS 981 ? 1_555 ZN ? D ZN . ? A ZN 2082 ? 1_555 SG ? A CYS 81 ? A CYS 1052 ? 1_555 104.0 ? 16 SG ? A CYS 78 ? A CYS 1049 ? 1_555 ZN ? D ZN . ? A ZN 2082 ? 1_555 SG ? A CYS 81 ? A CYS 1052 ? 1_555 114.1 ? 17 SG ? A CYS 28 ? A CYS 999 ? 1_555 ZN ? F ZN . ? A ZN 2084 ? 1_555 SG ? A CYS 31 ? A CYS 1002 ? 1_555 108.9 ? 18 SG ? A CYS 28 ? A CYS 999 ? 1_555 ZN ? F ZN . ? A ZN 2084 ? 1_555 SG ? A CYS 48 ? A CYS 1019 ? 1_555 114.8 ? 19 SG ? A CYS 31 ? A CYS 1002 ? 1_555 ZN ? F ZN . ? A ZN 2084 ? 1_555 SG ? A CYS 48 ? A CYS 1019 ? 1_555 113.9 ? 20 SG ? A CYS 28 ? A CYS 999 ? 1_555 ZN ? F ZN . ? A ZN 2084 ? 1_555 ND1 ? A HIS 55 ? A HIS 1026 ? 1_555 108.1 ? 21 SG ? A CYS 31 ? A CYS 1002 ? 1_555 ZN ? F ZN . ? A ZN 2084 ? 1_555 ND1 ? A HIS 55 ? A HIS 1026 ? 1_555 111.7 ? 22 SG ? A CYS 48 ? A CYS 1019 ? 1_555 ZN ? F ZN . ? A ZN 2084 ? 1_555 ND1 ? A HIS 55 ? A HIS 1026 ? 1_555 99.0 ? 23 SG ? A CYS 40 ? A CYS 1011 ? 1_555 ZN ? E ZN . ? A ZN 2083 ? 1_555 SG ? A CYS 43 ? A CYS 1014 ? 1_555 112.5 ? 24 SG ? A CYS 40 ? A CYS 1011 ? 1_555 ZN ? E ZN . ? A ZN 2083 ? 1_555 NE2 ? A HIS 59 ? A HIS 1030 ? 1_555 110.6 ? 25 SG ? A CYS 43 ? A CYS 1014 ? 1_555 ZN ? E ZN . ? A ZN 2083 ? 1_555 NE2 ? A HIS 59 ? A HIS 1030 ? 1_555 104.0 ? 26 SG ? A CYS 40 ? A CYS 1011 ? 1_555 ZN ? E ZN . ? A ZN 2083 ? 1_555 ND1 ? A HIS 65 ? A HIS 1036 ? 1_555 109.5 ? 27 SG ? A CYS 43 ? A CYS 1014 ? 1_555 ZN ? E ZN . ? A ZN 2083 ? 1_555 ND1 ? A HIS 65 ? A HIS 1036 ? 1_555 108.6 ? 28 NE2 ? A HIS 59 ? A HIS 1030 ? 1_555 ZN ? E ZN . ? A ZN 2083 ? 1_555 ND1 ? A HIS 65 ? A HIS 1036 ? 1_555 111.5 ? 29 NE2 ? A HIS 86 ? A HIS 1057 ? 1_555 NI ? H NI . ? A NI 2086 ? 1_555 NE2 ? A HIS 91 ? A HIS 1062 ? 1_555 106.2 ? 30 NE2 ? A HIS 86 ? A HIS 1057 ? 1_555 NI ? H NI . ? A NI 2086 ? 1_555 O ? I HOH . ? A HOH 3130 ? 1_555 74.6 ? 31 NE2 ? A HIS 91 ? A HIS 1062 ? 1_555 NI ? H NI . ? A NI 2086 ? 1_555 O ? I HOH . ? A HOH 3130 ? 1_555 92.3 ? 32 NE2 ? A HIS 86 ? A HIS 1057 ? 1_555 NI ? H NI . ? A NI 2086 ? 1_555 O ? I HOH . ? A HOH 3131 ? 1_555 79.3 ? 33 NE2 ? A HIS 91 ? A HIS 1062 ? 1_555 NI ? H NI . ? A NI 2086 ? 1_555 O ? I HOH . ? A HOH 3131 ? 1_555 164.9 ? 34 O ? I HOH . ? A HOH 3130 ? 1_555 NI ? H NI . ? A NI 2086 ? 1_555 O ? I HOH . ? A HOH 3131 ? 1_555 75.4 ? 35 NE2 ? A HIS 86 ? A HIS 1057 ? 1_555 NI ? H NI . ? A NI 2086 ? 1_555 O ? I HOH . ? A HOH 3132 ? 1_555 116.4 ? 36 NE2 ? A HIS 91 ? A HIS 1062 ? 1_555 NI ? H NI . ? A NI 2086 ? 1_555 O ? I HOH . ? A HOH 3132 ? 1_555 83.1 ? 37 O ? I HOH . ? A HOH 3130 ? 1_555 NI ? H NI . ? A NI 2086 ? 1_555 O ? I HOH . ? A HOH 3132 ? 1_555 168.9 ? 38 O ? I HOH . ? A HOH 3131 ? 1_555 NI ? H NI . ? A NI 2086 ? 1_555 O ? I HOH . ? A HOH 3132 ? 1_555 107.4 ? 39 NE2 ? A HIS 86 ? A HIS 1057 ? 1_555 NI ? H NI . ? A NI 2086 ? 1_555 O ? I HOH . ? A HOH 3138 ? 1_555 146.5 ? 40 NE2 ? A HIS 91 ? A HIS 1062 ? 1_555 NI ? H NI . ? A NI 2086 ? 1_555 O ? I HOH . ? A HOH 3138 ? 1_555 103.5 ? 41 O ? I HOH . ? A HOH 3130 ? 1_555 NI ? H NI . ? A NI 2086 ? 1_555 O ? I HOH . ? A HOH 3138 ? 1_555 89.0 ? 42 O ? I HOH . ? A HOH 3131 ? 1_555 NI ? H NI . ? A NI 2086 ? 1_555 O ? I HOH . ? A HOH 3138 ? 1_555 68.2 ? 43 O ? I HOH . ? A HOH 3132 ? 1_555 NI ? H NI . ? A NI 2086 ? 1_555 O ? I HOH . ? A HOH 3138 ? 1_555 82.3 ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 VAL A 46 ? CYS A 48 ? VAL A 1017 CYS A 1019 AA 2 ASN A 37 ? CYS A 40 ? ASN A 1008 CYS A 1011 AA 3 VAL A 67 ? SER A 70 ? VAL A 1038 SER A 1041 AA 4 VAL A 76 ? CYS A 78 ? VAL A 1047 CYS A 1049 AA 5 SER A 83 ? TYR A 84 ? SER A 1054 TYR A 1055 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 47 ? N LEU A 1018 O TRP A 38 ? O TRP A 1009 AA 2 3 N ILE A 39 ? N ILE A 1010 O LEU A 69 ? O LEU A 1040 AA 3 4 N VAL A 68 ? N VAL A 1039 O TRP A 77 ? O TRP A 1048 AA 4 5 N CYS A 78 ? N CYS A 1049 O SER A 83 ? O SER A 1054 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 2082 ? 4 'BINDING SITE FOR RESIDUE ZN A 2082' AC2 Software A ZN 2083 ? 4 'BINDING SITE FOR RESIDUE ZN A 2083' AC3 Software A ZN 2084 ? 4 'BINDING SITE FOR RESIDUE ZN A 2084' AC4 Software A NI 2085 ? 5 'BINDING SITE FOR RESIDUE NI A 2085' AC5 Software A NI 2086 ? 6 'BINDING SITE FOR RESIDUE NI A 2086' AC6 Software ? ? ? ? 7 'Binding site for Di-peptide GLY A2087 and GLY A2088' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 8 ? CYS A 979 . ? 1_555 ? 2 AC1 4 HIS A 10 ? HIS A 981 . ? 1_555 ? 3 AC1 4 CYS A 78 ? CYS A 1049 . ? 1_555 ? 4 AC1 4 CYS A 81 ? CYS A 1052 . ? 1_555 ? 5 AC2 4 CYS A 40 ? CYS A 1011 . ? 1_555 ? 6 AC2 4 CYS A 43 ? CYS A 1014 . ? 1_555 ? 7 AC2 4 HIS A 59 ? HIS A 1030 . ? 1_555 ? 8 AC2 4 HIS A 65 ? HIS A 1036 . ? 1_555 ? 9 AC3 4 CYS A 28 ? CYS A 999 . ? 1_555 ? 10 AC3 4 CYS A 31 ? CYS A 1002 . ? 1_555 ? 11 AC3 4 CYS A 48 ? CYS A 1019 . ? 1_555 ? 12 AC3 4 HIS A 55 ? HIS A 1026 . ? 1_555 ? 13 AC4 5 GLY A 1 ? GLY A 972 . ? 3_556 ? 14 AC4 5 HIS A 98 ? HIS A 1069 . ? 1_555 ? 15 AC4 5 HOH I . ? HOH A 3146 . ? 1_555 ? 16 AC4 5 HOH I . ? HOH A 3147 . ? 1_555 ? 17 AC4 5 HOH I . ? HOH A 3158 . ? 1_555 ? 18 AC5 6 HIS A 86 ? HIS A 1057 . ? 1_555 ? 19 AC5 6 HIS A 91 ? HIS A 1062 . ? 1_555 ? 20 AC5 6 HOH I . ? HOH A 3130 . ? 1_555 ? 21 AC5 6 HOH I . ? HOH A 3131 . ? 1_555 ? 22 AC5 6 HOH I . ? HOH A 3132 . ? 1_555 ? 23 AC5 6 HOH I . ? HOH A 3138 . ? 1_555 ? 24 AC6 7 TRP A 38 ? TRP A 1009 . ? 1_555 ? 25 AC6 7 GLY A 49 ? GLY A 1020 . ? 1_555 ? 26 AC6 7 ARG A 50 ? ARG A 1021 . ? 1_555 ? 27 AC6 7 TRP A 77 ? TRP A 1048 . ? 1_555 ? 28 AC6 7 TYR A 79 ? TYR A 1050 . ? 1_555 ? 29 AC6 7 HOH I . ? HOH A 3091 . ? 1_555 ? 30 AC6 7 HOH I . ? HOH A 3161 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 C _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLY _pdbx_validate_close_contact.auth_seq_id_1 2087 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLY _pdbx_validate_close_contact.auth_seq_id_2 2088 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.34 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 1013 ? ? -90.96 -65.28 2 1 VAL A 1023 ? ? -108.65 -101.49 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 3017 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id I _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -2.4313 _pdbx_refine_tls.origin_y -27.4241 _pdbx_refine_tls.origin_z 38.5376 _pdbx_refine_tls.T[1][1] -0.0123 _pdbx_refine_tls.T[2][2] -0.0174 _pdbx_refine_tls.T[3][3] -0.0456 _pdbx_refine_tls.T[1][2] 0.0060 _pdbx_refine_tls.T[1][3] -0.0230 _pdbx_refine_tls.T[2][3] -0.0082 _pdbx_refine_tls.L[1][1] 0.5769 _pdbx_refine_tls.L[2][2] 3.1091 _pdbx_refine_tls.L[3][3] 0.8970 _pdbx_refine_tls.L[1][2] 0.2121 _pdbx_refine_tls.L[1][3] -0.1560 _pdbx_refine_tls.L[2][3] 0.5810 _pdbx_refine_tls.S[1][1] -0.0060 _pdbx_refine_tls.S[1][2] 0.0308 _pdbx_refine_tls.S[1][3] 0.0397 _pdbx_refine_tls.S[2][1] -0.1864 _pdbx_refine_tls.S[2][2] -0.0188 _pdbx_refine_tls.S[2][3] 0.1160 _pdbx_refine_tls.S[3][1] -0.0329 _pdbx_refine_tls.S[3][2] -0.0591 _pdbx_refine_tls.S[3][3] 0.0248 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details '{ A|* }' # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 3030 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.33 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 NI NI NI N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 THR N N N N 305 THR CA C N S 306 THR C C N N 307 THR O O N N 308 THR CB C N R 309 THR OG1 O N N 310 THR CG2 C N N 311 THR OXT O N N 312 THR H H N N 313 THR H2 H N N 314 THR HA H N N 315 THR HB H N N 316 THR HG1 H N N 317 THR HG21 H N N 318 THR HG22 H N N 319 THR HG23 H N N 320 THR HXT H N N 321 TRP N N N N 322 TRP CA C N S 323 TRP C C N N 324 TRP O O N N 325 TRP CB C N N 326 TRP CG C Y N 327 TRP CD1 C Y N 328 TRP CD2 C Y N 329 TRP NE1 N Y N 330 TRP CE2 C Y N 331 TRP CE3 C Y N 332 TRP CZ2 C Y N 333 TRP CZ3 C Y N 334 TRP CH2 C Y N 335 TRP OXT O N N 336 TRP H H N N 337 TRP H2 H N N 338 TRP HA H N N 339 TRP HB2 H N N 340 TRP HB3 H N N 341 TRP HD1 H N N 342 TRP HE1 H N N 343 TRP HE3 H N N 344 TRP HZ2 H N N 345 TRP HZ3 H N N 346 TRP HH2 H N N 347 TRP HXT H N N 348 TYR N N N N 349 TYR CA C N S 350 TYR C C N N 351 TYR O O N N 352 TYR CB C N N 353 TYR CG C Y N 354 TYR CD1 C Y N 355 TYR CD2 C Y N 356 TYR CE1 C Y N 357 TYR CE2 C Y N 358 TYR CZ C Y N 359 TYR OH O N N 360 TYR OXT O N N 361 TYR H H N N 362 TYR H2 H N N 363 TYR HA H N N 364 TYR HB2 H N N 365 TYR HB3 H N N 366 TYR HD1 H N N 367 TYR HD2 H N N 368 TYR HE1 H N N 369 TYR HE2 H N N 370 TYR HH H N N 371 TYR HXT H N N 372 VAL N N N N 373 VAL CA C N S 374 VAL C C N N 375 VAL O O N N 376 VAL CB C N N 377 VAL CG1 C N N 378 VAL CG2 C N N 379 VAL OXT O N N 380 VAL H H N N 381 VAL H2 H N N 382 VAL HA H N N 383 VAL HB H N N 384 VAL HG11 H N N 385 VAL HG12 H N N 386 VAL HG13 H N N 387 VAL HG21 H N N 388 VAL HG22 H N N 389 VAL HG23 H N N 390 VAL HXT H N N 391 ZN ZN ZN N N 392 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3C5K _pdbx_initial_refinement_model.details 'PDB ENTRY 3C5K' # _atom_sites.entry_id 5G0F _atom_sites.fract_transf_matrix[1][1] 0.009927 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009927 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009927 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O S ZN # loop_