HEADER    CELL CYCLE                              18-MAR-16   5G0G              
TITLE     CRYSTAL STRUCTURE OF DANIO RERIO HDAC6 CD1 IN COMPLEX WITH            
TITLE    2 TRICHOSTATIN A                                                       
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: HDAC6;                                                     
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: CATALYTIC DOMAIN 1, UNP RESIDUES 40-418;                   
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: DANIO RERIO;                                    
SOURCE   3 ORGANISM_COMMON: ZEBRAFISH;                                          
SOURCE   4 ORGANISM_TAXID: 7955;                                                
SOURCE   5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA;                            
SOURCE   6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM;                             
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 7108;                                       
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: SF9;                                       
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS;                          
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: POPINF                                    
KEYWDS    CELL CYCLE, HISTONE, HISTONE DEACETYLASE                              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    Y.MIYAKE,J.J.KEUSCH,L.WANG,M.SAITO,D.HESS,X.WANG,B.J.MELANCON,        
AUTHOR   2 P.HELQUIST,H.GUT,P.MATTHIAS                                          
REVDAT   4   01-MAY-24 5G0G    1       REMARK LINK                              
REVDAT   3   28-SEP-16 5G0G    1       JRNL                                     
REVDAT   2   10-AUG-16 5G0G    1       JRNL                                     
REVDAT   1   27-JUL-16 5G0G    0                                                
JRNL        AUTH   Y.MIYAKE,J.J.KEUSCH,L.WANG,M.SAITO,D.HESS,X.WANG,            
JRNL        AUTH 2 B.J.MELANCON,P.HELQUIST,H.GUT,P.MATTHIAS                     
JRNL        TITL   STRUCTURAL INSIGHTS INTO HDAC6 TUBULIN DEACETYLATION AND ITS 
JRNL        TITL 2 SELECTIVE INHIBITION                                         
JRNL        REF    NAT.CHEM.BIOL.                V.  12   748 2016              
JRNL        REFN                   ISSN 1552-4450                               
JRNL        PMID   27454931                                                     
JRNL        DOI    10.1038/NCHEMBIO.2140                                        
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.50 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (PHENIX.REFINE)                               
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 46.51                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.340                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.1                           
REMARK   3   NUMBER OF REFLECTIONS             : 59655                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.140                           
REMARK   3   R VALUE            (WORKING SET) : 0.139                           
REMARK   3   FREE R VALUE                     : 0.170                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 2983                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 46.5274 -  4.1360    0.99     2890   153  0.1346 0.1501        
REMARK   3     2  4.1360 -  3.2831    0.98     2771   146  0.1311 0.1594        
REMARK   3     3  3.2831 -  2.8682    0.99     2763   145  0.1510 0.1827        
REMARK   3     4  2.8682 -  2.6059    0.99     2775   146  0.1450 0.1847        
REMARK   3     5  2.6059 -  2.4192    0.99     2742   144  0.1381 0.1510        
REMARK   3     6  2.4192 -  2.2766    1.00     2742   145  0.1308 0.1752        
REMARK   3     7  2.2766 -  2.1625    0.99     2737   144  0.1253 0.1510        
REMARK   3     8  2.1625 -  2.0684    0.97     2629   138  0.1223 0.1581        
REMARK   3     9  2.0684 -  1.9888    0.98     2695   142  0.1219 0.1700        
REMARK   3    10  1.9888 -  1.9201    0.99     2705   142  0.1196 0.1581        
REMARK   3    11  1.9201 -  1.8601    0.99     2690   142  0.1197 0.1613        
REMARK   3    12  1.8601 -  1.8069    0.98     2700   142  0.1197 0.1650        
REMARK   3    13  1.8069 -  1.7594    0.99     2713   143  0.1312 0.1691        
REMARK   3    14  1.7594 -  1.7164    0.99     2710   142  0.1383 0.1749        
REMARK   3    15  1.7164 -  1.6774    0.98     2679   141  0.1526 0.2139        
REMARK   3    16  1.6774 -  1.6417    0.98     2663   141  0.1674 0.2235        
REMARK   3    17  1.6417 -  1.6089    0.98     2665   140  0.1848 0.2232        
REMARK   3    18  1.6089 -  1.5785    0.98     2695   142  0.2049 0.2734        
REMARK   3    19  1.5785 -  1.5503    0.98     2654   139  0.2178 0.2707        
REMARK   3    20  1.5503 -  1.5240    0.96     2603   137  0.2521 0.2768        
REMARK   3    21  1.5240 -  1.4995    0.90     2451   129  0.3208 0.3501        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.170            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.430           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 24.62                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 30.50                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.005           3062                                  
REMARK   3   ANGLE     :  0.791           4180                                  
REMARK   3   CHIRALITY :  0.075            451                                  
REMARK   3   PLANARITY :  0.005            567                                  
REMARK   3   DIHEDRAL  : 14.024           1136                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5G0G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-MAR-16.                  
REMARK 100 THE DEPOSITION ID IS D_1290066424.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : NULL                               
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : NULL                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SLS                                
REMARK 200  BEAMLINE                       : X06DA                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.9780                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : MIRRORS                            
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS 2M                 
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : XSCALE                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 51661                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.500                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -3.000                             
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 98.1                               
REMARK 200  DATA REDUNDANCY                : 5.500                              
REMARK 200  R MERGE                    (I) : 0.04000                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 20.6000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.54                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 91.8                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 5.00                               
REMARK 200  R MERGE FOR SHELL          (I) : 1.22000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 1.300                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: HOMOLOGY MODEL                                       
REMARK 200                                                                      
REMARK 200 REMARK: NONE                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 41.00                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 23% PEG 3350, 0.2M MGCL2, 0.1M HEPES     
REMARK 280  PH 7.0, SB ADDITIVE A7                                              
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,-Y,Z+1/2                                             
REMARK 290       3555   -X,Y,-Z+1/2                                             
REMARK 290       4555   X,-Y,-Z                                                 
REMARK 290       5555   X+1/2,Y+1/2,Z                                           
REMARK 290       6555   -X+1/2,-Y+1/2,Z+1/2                                     
REMARK 290       7555   -X+1/2,Y+1/2,-Z+1/2                                     
REMARK 290       8555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       59.23500            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       59.23500            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   5  1.000000  0.000000  0.000000       34.23500            
REMARK 290   SMTRY2   5  0.000000  1.000000  0.000000       46.50500            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   6 -1.000000  0.000000  0.000000       34.23500            
REMARK 290   SMTRY2   6  0.000000 -1.000000  0.000000       46.50500            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       59.23500            
REMARK 290   SMTRY1   7 -1.000000  0.000000  0.000000       34.23500            
REMARK 290   SMTRY2   7  0.000000  1.000000  0.000000       46.50500            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000       59.23500            
REMARK 290   SMTRY1   8  1.000000  0.000000  0.000000       34.23500            
REMARK 290   SMTRY2   8  0.000000 -1.000000  0.000000       46.50500            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH A2083  LIES ON A SPECIAL POSITION.                          
REMARK 375      HOH A2093  LIES ON A SPECIAL POSITION.                          
REMARK 375      HOH A2156  LIES ON A SPECIAL POSITION.                          
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLY A    39                                                      
REMARK 465     PRO A    40                                                      
REMARK 465     ALA A    41                                                      
REMARK 465     GLU A    42                                                      
REMARK 465     GLU A    43                                                      
REMARK 465     GLU A    44                                                      
REMARK 465     MET A    45                                                      
REMARK 465     SER A    46                                                      
REMARK 465     ASN A    47                                                      
REMARK 465     GLU A    48                                                      
REMARK 465     LEU A    49                                                      
REMARK 465     GLN A    50                                                      
REMARK 465     ASN A    51                                                      
REMARK 465     LEU A    52                                                      
REMARK 465     ASP A    53                                                      
REMARK 465     VAL A    54                                                      
REMARK 465     GLN A    55                                                      
REMARK 465     GLY A    56                                                      
REMARK 465     LYS A    57                                                      
REMARK 465     SER A    58                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ARG A  73       33.10    -98.24                                   
REMARK 500    TYR A 255      -50.52   -135.85                                   
REMARK 500    LEU A 303      -61.87   -128.82                                   
REMARK 500    GLU A 360     -111.72   -111.83                                   
REMARK 500    PRO A 388      -74.62    -67.81                                   
REMARK 500    SER A 389       41.91    -76.49                                   
REMARK 500    GLN A 416       55.74    -98.21                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH A2123        DISTANCE =  6.79 ANGSTROMS                       
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NA A1421  NA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A 228   OD1                                                    
REMARK 620 2 ASP A 228   O    73.1                                              
REMARK 620 3 ASP A 230   O    98.9 105.8                                        
REMARK 620 4 HIS A 232   O    90.7 163.0  81.4                                  
REMARK 620 5 SER A 251   OG  104.0  85.3 156.7  93.9                            
REMARK 620 6 VAL A 252   O   151.0  81.8  73.9 115.2  87.9                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A1419  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A 230   OD2                                                    
REMARK 620 2 ASP A 230   OD1  57.1                                              
REMARK 620 3 HIS A 232   ND1 152.9  95.9                                        
REMARK 620 4 ASP A 323   OD2  91.0 107.2  95.5                                  
REMARK 620 5 TSN A1427   O1   77.3  84.2 104.6 155.8                            
REMARK 620 6 TSN A1427   O2  121.0 163.3  85.4  89.1  79.3                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NA A1420  NA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 PHE A 241   O                                                      
REMARK 620 2 ASP A 244   O    95.5                                              
REMARK 620 3 VAL A 247   O   143.0  84.8                                        
REMARK 620 4 HOH A2149   O    77.1 103.1 138.9                                  
REMARK 620 5 HOH A2150   O    87.0 166.4  85.1  90.5                            
REMARK 620 N                    1     2     3     4                             
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1419                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1420                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1421                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1422                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1423                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1424                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC7                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1425                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC8                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1426                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC9                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TSN A 1427                
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 5G0F   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF DANIO RERIO HDAC6 ZNF-UBP DOMAIN                
REMARK 900 RELATED ID: 5G0H   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF DANIO RERIO HDAC6 CD2 IN COMPLEX WITH (S)-      
REMARK 900 TRICHOSTATIN A                                                       
REMARK 900 RELATED ID: 5G0I   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF DANIO RERIO HDAC6 CD1 AND CD2 ( LINKER CLEAVED) 
REMARK 900 IN COMPLEX WITH NEXTURASTAT A                                        
REMARK 900 RELATED ID: 5G0J   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF DANIO RERIO HDAC6 CD1 AND CD2 ( LINKER INTACT)  
REMARK 900 IN COMPLEX WITH NEXTURASTAT A                                        
DBREF  5G0G A   41   418  UNP    F8W4B7   F8W4B7_DANRE    41    418             
SEQADV 5G0G GLY A   39  UNP  F8W4B7              EXPRESSION TAG                 
SEQADV 5G0G PRO A   40  UNP  F8W4B7              EXPRESSION TAG                 
SEQRES   1 A  380  GLY PRO ALA GLU GLU GLU MET SER ASN GLU LEU GLN ASN          
SEQRES   2 A  380  LEU ASP VAL GLN GLY LYS SER LYS ALA THR GLY THR GLY          
SEQRES   3 A  380  LEU VAL TYR VAL ASP ALA PHE THR ARG PHE HIS CYS LEU          
SEQRES   4 A  380  TRP ASP ALA SER HIS PRO GLU CYS PRO ALA ARG VAL SER          
SEQRES   5 A  380  THR VAL MET GLU MET LEU GLU THR GLU GLY LEU LEU GLY          
SEQRES   6 A  380  ARG CYS VAL GLN VAL GLU ALA ARG ALA VAL THR GLU ASP          
SEQRES   7 A  380  GLU LEU LEU LEU VAL HIS THR LYS GLU TYR VAL GLU LEU          
SEQRES   8 A  380  MET LYS SER THR GLN ASN MET THR GLU GLU GLU LEU LYS          
SEQRES   9 A  380  THR LEU ALA GLU LYS TYR ASP SER VAL TYR LEU HIS PRO          
SEQRES  10 A  380  GLY PHE PHE SER SER ALA CYS LEU SER VAL GLY SER VAL          
SEQRES  11 A  380  LEU GLN LEU VAL ASP LYS VAL MET THR SER GLN LEU ARG          
SEQRES  12 A  380  ASN GLY PHE SER ILE ASN ARG PRO PRO GLY HIS HIS ALA          
SEQRES  13 A  380  GLN ALA ASP LYS MET ASN GLY PHE CYS MET PHE ASN ASN          
SEQRES  14 A  380  LEU ALA ILE ALA ALA ARG TYR ALA GLN LYS ARG HIS ARG          
SEQRES  15 A  380  VAL GLN ARG VAL LEU ILE VAL ASP TRP ASP VAL HIS HIS          
SEQRES  16 A  380  GLY GLN GLY ILE GLN TYR ILE PHE GLU GLU ASP PRO SER          
SEQRES  17 A  380  VAL LEU TYR PHE SER VAL HIS ARG TYR GLU ASP GLY SER          
SEQRES  18 A  380  PHE TRP PRO HIS LEU LYS GLU SER ASP SER SER SER VAL          
SEQRES  19 A  380  GLY SER GLY ALA GLY GLN GLY TYR ASN ILE ASN LEU PRO          
SEQRES  20 A  380  TRP ASN LYS VAL GLY MET GLU SER GLY ASP TYR ILE THR          
SEQRES  21 A  380  ALA PHE GLN GLN LEU LEU LEU PRO VAL ALA TYR GLU PHE          
SEQRES  22 A  380  GLN PRO GLN LEU VAL LEU VAL ALA ALA GLY PHE ASP ALA          
SEQRES  23 A  380  VAL ILE GLY ASP PRO LYS GLY GLY MET GLN VAL SER PRO          
SEQRES  24 A  380  GLU CYS PHE SER ILE LEU THR HIS MET LEU LYS GLY VAL          
SEQRES  25 A  380  ALA GLN GLY ARG LEU VAL LEU ALA LEU GLU GLY GLY TYR          
SEQRES  26 A  380  ASN LEU GLN SER THR ALA GLU GLY VAL CYS ALA SER MET          
SEQRES  27 A  380  ARG SER LEU LEU GLY ASP PRO CYS PRO HIS LEU PRO SER          
SEQRES  28 A  380  SER GLY ALA PRO CYS GLU SER ALA LEU LYS SER ILE SER          
SEQRES  29 A  380  LYS THR ILE SER ASP LEU TYR PRO PHE TRP LYS SER LEU          
SEQRES  30 A  380  GLN THR PHE                                                  
HET     ZN  A1419       1                                                       
HET     NA  A1420       1                                                       
HET     NA  A1421       1                                                       
HET     CL  A1422       1                                                       
HET     CL  A1423       1                                                       
HET     CL  A1424       1                                                       
HET     CL  A1425       1                                                       
HET     CL  A1426       1                                                       
HET    TSN  A1427      22                                                       
HETNAM      ZN ZINC ION                                                         
HETNAM      NA SODIUM ION                                                       
HETNAM      CL CHLORIDE ION                                                     
HETNAM     TSN TRICHOSTATIN A                                                   
HETSYN     TSN 7-[4-(DIMETHYLAMINO)PHENYL]-N-HYDROXY-4,6-DIMETHYL-7-            
HETSYN   2 TSN  OXO-2,4-HEPTADIENAMIDE                                          
FORMUL   2   ZN    ZN 2+                                                        
FORMUL   3   NA    2(NA 1+)                                                     
FORMUL   5   CL    5(CL 1-)                                                     
FORMUL  10  TSN    C17 H22 N2 O3                                                
FORMUL  11  HOH   *250(H2 O)                                                    
HELIX    1   1 VAL A   68  ARG A   73  5                                   6    
HELIX    2   2 PRO A   86  GLU A   99  1                                  14    
HELIX    3   3 LEU A  101  CYS A  105  5                                   5    
HELIX    4   4 THR A  114  LEU A  119  1                                   6    
HELIX    5   5 THR A  123  THR A  133  1                                  11    
HELIX    6   6 GLN A  134  MET A  136  5                                   3    
HELIX    7   7 THR A  137  GLU A  146  1                                  10    
HELIX    8   8 GLY A  156  THR A  177  1                                  22    
HELIX    9   9 ASN A  206  ARG A  220  1                                  15    
HELIX   10  10 GLY A  234  GLU A  242  1                                   9    
HELIX   11  11 GLU A  256  SER A  259  5                                   4    
HELIX   12  12 LEU A  264  ASP A  268  5                                   5    
HELIX   13  13 SER A  274  GLN A  278  5                                   5    
HELIX   14  14 GLU A  292  LEU A  303  1                                  12    
HELIX   15  15 LEU A  303  GLN A  312  1                                  10    
HELIX   16  16 GLU A  338  LYS A  348  1                                  11    
HELIX   17  17 GLY A  349  GLY A  353  5                                   5    
HELIX   18  18 ASN A  364  LEU A  380  1                                  17    
HELIX   19  19 CYS A  394  TYR A  409  1                                  16    
HELIX   20  20 PRO A  410  GLN A  416  5                                   7    
SHEET    1  AA 8 VAL A 106  GLN A 107  0                                        
SHEET    2  AA 8 THR A  63  VAL A  66  1  O  THR A  63   N  VAL A 106           
SHEET    3  AA 8 ASN A 182  SER A 185  1  O  ASN A 182   N  GLY A  64           
SHEET    4  AA 8 LEU A 355  LEU A 359  1  O  LEU A 355   N  GLY A 183           
SHEET    5  AA 8 LEU A 315  ALA A 320  1  O  VAL A 316   N  VAL A 356           
SHEET    6  AA 8 VAL A 224  ASP A 228  1  O  LEU A 225   N  LEU A 317           
SHEET    7  AA 8 VAL A 247  ARG A 254  1  O  LEU A 248   N  ILE A 226           
SHEET    8  AA 8 ASN A 281  TRP A 286  1  O  ILE A 282   N  SER A 251           
LINK         OD1 ASP A 228                NA    NA A1421     1555   1555  2.50  
LINK         O   ASP A 228                NA    NA A1421     1555   1555  2.73  
LINK         OD2 ASP A 230                ZN    ZN A1419     1555   1555  2.45  
LINK         OD1 ASP A 230                ZN    ZN A1419     1555   1555  2.05  
LINK         O   ASP A 230                NA    NA A1421     1555   1555  2.31  
LINK         ND1 HIS A 232                ZN    ZN A1419     1555   1555  2.16  
LINK         O   HIS A 232                NA    NA A1421     1555   1555  2.58  
LINK         O   PHE A 241                NA    NA A1420     1555   1555  2.50  
LINK         O   ASP A 244                NA    NA A1420     1555   1555  2.28  
LINK         O   VAL A 247                NA    NA A1420     1555   1555  2.34  
LINK         OG  SER A 251                NA    NA A1421     1555   1555  2.61  
LINK         O   VAL A 252                NA    NA A1421     1555   1555  2.55  
LINK         OD2 ASP A 323                ZN    ZN A1419     1555   1555  2.01  
LINK        ZN    ZN A1419                 O1  TSN A1427     1555   1555  2.00  
LINK        ZN    ZN A1419                 O2  TSN A1427     1555   1555  2.16  
LINK        NA    NA A1420                 O   HOH A2149     1555   1555  2.35  
LINK        NA    NA A1420                 O   HOH A2150     1555   1555  2.30  
CISPEP   1 ARG A  188    PRO A  189          0         4.79                     
CISPEP   2 TRP A  261    PRO A  262          0         8.79                     
SITE     1 AC1  4 ASP A 230  HIS A 232  ASP A 323  TSN A1427                    
SITE     1 AC2  6 PHE A 241  ASP A 244  VAL A 247  TYR A 280                    
SITE     2 AC2  6 HOH A2149  HOH A2150                                          
SITE     1 AC3  5 ASP A 228  ASP A 230  HIS A 232  SER A 251                    
SITE     2 AC3  5 VAL A 252                                                     
SITE     1 AC4  3 TRP A  78  LEU A 153  HOH A2017                               
SITE     1 AC5  2 ARG A 181  HOH A2215                                          
SITE     1 AC6  5 SER A 293  SER A 336  PRO A 388  SER A 389                    
SITE     2 AC6  5 SER A 390                                                     
SITE     1 AC7  2 LYS A 174  GLN A 179                                          
SITE     1 AC8  2 CYS A 394  GLU A 395                                          
SITE     1 AC9 16 SER A 150  HIS A 192  HIS A 193  GLY A 201                    
SITE     2 AC9 16 PHE A 202  ASP A 230  HIS A 232  ASP A 257                    
SITE     3 AC9 16 GLY A 258  SER A 259  HIS A 263  LYS A 265                    
SITE     4 AC9 16 ASP A 323  LYS A 330  TYR A 363   ZN A1419                    
CRYST1   68.470   93.010  118.470  90.00  90.00  90.00 C 2 2 21      8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.014605  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.010752  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.008441        0.00000