HEADER STRUCTURAL PROTEIN 06-APR-16 5G24 TITLE TYPE IV-LIKE PILIN TTHA1219 FROM THERMUS THERMOPHILUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYPE-IV LIKE PILIN TTHA1219; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: T7 EXPRESS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET22B KEYWDS STRUCTURAL PROTEIN, NATURAL COMPETENCE, TYPE IV PILUS, DNA UPTAKE EXPDTA X-RAY DIFFRACTION AUTHOR V.KARUPPIAH,J.P.DERRICK REVDAT 4 10-JAN-24 5G24 1 REMARK REVDAT 3 07-DEC-16 5G24 1 JRNL REVDAT 2 28-SEP-16 5G24 1 JRNL REVDAT 1 14-SEP-16 5G24 0 JRNL AUTH V.KARUPPIAH,A.THISTLETHWAITE,J.P.DERRICK JRNL TITL STRUCTURES OF TYPE IV PILINS FROM THERMUS THERMOPHILUS JRNL TITL 2 DEMONSTRATE SIMILARITIES WITH TYPE II SECRETION SYSTEM JRNL TITL 3 PSEUDOPILINS JRNL REF J.STRUCT.BIOL. V. 196 375 2016 JRNL REFN ISSN 1047-8477 JRNL PMID 27612581 JRNL DOI 10.1016/J.JSB.2016.08.006 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 97.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 15747 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 838 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1126 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.2730 REMARK 3 BIN FREE R VALUE SET COUNT : 50 REMARK 3 BIN FREE R VALUE : 0.3210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2937 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 79 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.09000 REMARK 3 B22 (A**2) : -0.42000 REMARK 3 B33 (A**2) : 0.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.06000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.403 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.246 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.203 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.194 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2999 ; 0.021 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2878 ; 0.010 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4080 ; 1.877 ; 1.986 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6605 ; 1.562 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 390 ; 7.387 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 123 ;31.819 ;23.008 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 463 ;15.962 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;18.027 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 452 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3442 ; 0.013 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 664 ; 0.007 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1572 ; 1.870 ; 2.088 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1571 ; 1.867 ; 2.085 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1958 ; 3.006 ; 3.117 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1427 ; 2.355 ; 2.401 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 33 A 236 REMARK 3 ORIGIN FOR THE GROUP (A): -26.8710 -11.3810 16.6910 REMARK 3 T TENSOR REMARK 3 T11: 0.1670 T22: 0.1711 REMARK 3 T33: 0.0577 T12: -0.0225 REMARK 3 T13: 0.0448 T23: 0.0326 REMARK 3 L TENSOR REMARK 3 L11: 2.4936 L22: 1.4296 REMARK 3 L33: 2.3259 L12: 0.6776 REMARK 3 L13: -0.2164 L23: -0.1255 REMARK 3 S TENSOR REMARK 3 S11: 0.1062 S12: -0.4644 S13: -0.2526 REMARK 3 S21: 0.1852 S22: -0.1443 S23: -0.1217 REMARK 3 S31: 0.0717 S32: 0.1111 S33: 0.0381 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 39 B 236 REMARK 3 ORIGIN FOR THE GROUP (A): -47.6730 -11.7310 30.4820 REMARK 3 T TENSOR REMARK 3 T11: 0.1139 T22: 0.2719 REMARK 3 T33: 0.0470 T12: 0.0148 REMARK 3 T13: 0.0587 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 1.6719 L22: 1.5470 REMARK 3 L33: 6.3916 L12: 0.0942 REMARK 3 L13: -0.5199 L23: -0.4346 REMARK 3 S TENSOR REMARK 3 S11: -0.0306 S12: -0.1323 S13: 0.1011 REMARK 3 S21: 0.0100 S22: 0.0680 S23: -0.0986 REMARK 3 S31: -0.0641 S32: -0.3679 S33: -0.0375 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 5G24 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-APR-16. REMARK 100 THE DEPOSITION ID IS D_1290066646. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16586 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 57.770 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 8.00 REMARK 200 R MERGE FOR SHELL (I) : 0.82000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 5G23 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.01M ZINC CHLORIDE, 0.1M SODIUM REMARK 280 ACETATE PH 5 AND 20% (W/V) PEG 6000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 58.41500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 16.08500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 58.41500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 16.08500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 ARG A 3 REMARK 465 HIS A 4 REMARK 465 GLY A 5 REMARK 465 PHE A 6 REMARK 465 SER A 7 REMARK 465 LEU A 8 REMARK 465 LEU A 9 REMARK 465 GLU A 10 REMARK 465 LEU A 11 REMARK 465 LEU A 12 REMARK 465 LEU A 13 REMARK 465 ALA A 14 REMARK 465 SER A 15 REMARK 465 VAL A 16 REMARK 465 LEU A 17 REMARK 465 MET A 18 REMARK 465 GLY A 19 REMARK 465 SER A 20 REMARK 465 LEU A 21 REMARK 465 LEU A 22 REMARK 465 LEU A 23 REMARK 465 VAL A 24 REMARK 465 VAL A 25 REMARK 465 LEU A 26 REMARK 465 ALA A 27 REMARK 465 LEU A 28 REMARK 465 GLU A 29 REMARK 465 ASN A 30 REMARK 465 SER A 31 REMARK 465 SER A 32 REMARK 465 GLY A 98 REMARK 465 GLU A 99 REMARK 465 SER A 100 REMARK 465 MET A 101 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 ARG B 3 REMARK 465 HIS B 4 REMARK 465 GLY B 5 REMARK 465 PHE B 6 REMARK 465 SER B 7 REMARK 465 LEU B 8 REMARK 465 LEU B 9 REMARK 465 GLU B 10 REMARK 465 LEU B 11 REMARK 465 LEU B 12 REMARK 465 LEU B 13 REMARK 465 ALA B 14 REMARK 465 SER B 15 REMARK 465 VAL B 16 REMARK 465 LEU B 17 REMARK 465 MET B 18 REMARK 465 GLY B 19 REMARK 465 SER B 20 REMARK 465 LEU B 21 REMARK 465 LEU B 22 REMARK 465 LEU B 23 REMARK 465 VAL B 24 REMARK 465 VAL B 25 REMARK 465 LEU B 26 REMARK 465 ALA B 27 REMARK 465 LEU B 28 REMARK 465 GLU B 29 REMARK 465 ASN B 30 REMARK 465 SER B 31 REMARK 465 SER B 32 REMARK 465 ALA B 33 REMARK 465 THR B 34 REMARK 465 LEU B 35 REMARK 465 ARG B 36 REMARK 465 GLU B 37 REMARK 465 ARG B 38 REMARK 465 GLY B 98 REMARK 465 GLU B 99 REMARK 465 SER B 100 REMARK 465 MET B 101 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 117 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 130 97.55 -64.89 REMARK 500 ASP A 138 -96.09 -149.93 REMARK 500 LEU B 129 81.20 48.02 REMARK 500 ASP B 138 -99.46 -148.05 REMARK 500 PRO B 203 125.48 -37.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5G23 RELATED DB: PDB REMARK 900 TYPE IV-LIKE PILIN TTHA1219 FROM THERMUS THERMOPHILUS REMARK 900 RELATED ID: 5G25 RELATED DB: PDB REMARK 900 TYPE IV-LIKE PILIN TTHA1218 FROM THERMUS THERMOPHILUS REMARK 900 RELATED ID: 5G2F RELATED DB: PDB REMARK 900 TYPE IV-LIKE COMPETENCE PILIN TTHA1222 FROM THERMUS THERMOPHILUS DBREF 5G24 A 1 236 UNP Q5SIZ5 Q5SIZ5_THET8 1 236 DBREF 5G24 B 1 236 UNP Q5SIZ5 Q5SIZ5_THET8 1 236 SEQRES 1 A 236 MET ARG ARG HIS GLY PHE SER LEU LEU GLU LEU LEU LEU SEQRES 2 A 236 ALA SER VAL LEU MET GLY SER LEU LEU LEU VAL VAL LEU SEQRES 3 A 236 ALA LEU GLU ASN SER SER ALA THR LEU ARG GLU ARG GLU SEQRES 4 A 236 ARG ALA ARG GLY ARG LEU ALA ASP GLU LEU SER LEU THR SEQRES 5 A 236 ALA THR VAL LEU ALA ARG GLU LEU TYR THR VAL GLY TYR SEQRES 6 A 236 ARG LEU THR GLY GLN ALA LEU VAL LEU SER PRO SER SER SEQRES 7 A 236 GLN GLY ASP GLY VAL GLN GLY TRP PHE LEU CYS GLU ALA SEQRES 8 A 236 GLY MET GLU GLU ILE CYS GLY GLU SER MET GLY GLU VAL SEQRES 9 A 236 ARG GLY THR GLY TYR GLU VAL ASN GLN GLY ALA LEU ARG SEQRES 10 A 236 TRP GLY ALA CYS LYS GLY GLU GLY CYS ALA PRO LEU PRO SEQRES 11 A 236 ASN ASN PRO VAL LEU GLY GLY ASP GLU VAL GLN VAL GLU SEQRES 12 A 236 ALA PHE ARG VAL ALA TYR LEU GLU GLY GLY THR TRP LYS SEQRES 13 A 236 ARG GLN ALA GLN ALA VAL ASN LEU ARG PRO GLU GLY ALA SEQRES 14 A 236 SER PRO LYS VAL SER ALA LEU ALA LEU TYR LEU LEU ALA SEQRES 15 A 236 SER VAL PRO VAL ARG GLY GLY ALA PRO ALA PHE THR PRO SEQRES 16 A 236 GLY SER THR LEU SER TYR PRO PRO GLY LEU THR SER SER SEQRES 17 A 236 LEU LEU GLU LEU PRO GLY ALA PRO ASN ASP GLY ARG LEU SEQRES 18 A 236 ARG ALA GLU LYS LEU TRP ILE VAL GLN THR PRO ASN LEU SEQRES 19 A 236 ALA ARG SEQRES 1 B 236 MET ARG ARG HIS GLY PHE SER LEU LEU GLU LEU LEU LEU SEQRES 2 B 236 ALA SER VAL LEU MET GLY SER LEU LEU LEU VAL VAL LEU SEQRES 3 B 236 ALA LEU GLU ASN SER SER ALA THR LEU ARG GLU ARG GLU SEQRES 4 B 236 ARG ALA ARG GLY ARG LEU ALA ASP GLU LEU SER LEU THR SEQRES 5 B 236 ALA THR VAL LEU ALA ARG GLU LEU TYR THR VAL GLY TYR SEQRES 6 B 236 ARG LEU THR GLY GLN ALA LEU VAL LEU SER PRO SER SER SEQRES 7 B 236 GLN GLY ASP GLY VAL GLN GLY TRP PHE LEU CYS GLU ALA SEQRES 8 B 236 GLY MET GLU GLU ILE CYS GLY GLU SER MET GLY GLU VAL SEQRES 9 B 236 ARG GLY THR GLY TYR GLU VAL ASN GLN GLY ALA LEU ARG SEQRES 10 B 236 TRP GLY ALA CYS LYS GLY GLU GLY CYS ALA PRO LEU PRO SEQRES 11 B 236 ASN ASN PRO VAL LEU GLY GLY ASP GLU VAL GLN VAL GLU SEQRES 12 B 236 ALA PHE ARG VAL ALA TYR LEU GLU GLY GLY THR TRP LYS SEQRES 13 B 236 ARG GLN ALA GLN ALA VAL ASN LEU ARG PRO GLU GLY ALA SEQRES 14 B 236 SER PRO LYS VAL SER ALA LEU ALA LEU TYR LEU LEU ALA SEQRES 15 B 236 SER VAL PRO VAL ARG GLY GLY ALA PRO ALA PHE THR PRO SEQRES 16 B 236 GLY SER THR LEU SER TYR PRO PRO GLY LEU THR SER SER SEQRES 17 B 236 LEU LEU GLU LEU PRO GLY ALA PRO ASN ASP GLY ARG LEU SEQRES 18 B 236 ARG ALA GLU LYS LEU TRP ILE VAL GLN THR PRO ASN LEU SEQRES 19 B 236 ALA ARG FORMUL 3 HOH *79(H2 O) HELIX 1 1 THR A 34 THR A 62 1 29 HELIX 2 2 THR A 206 GLU A 211 1 6 HELIX 3 3 PRO A 232 ALA A 235 5 4 HELIX 4 4 GLU B 39 THR B 62 1 24 HELIX 5 5 THR B 206 GLU B 211 1 6 HELIX 6 6 PRO B 232 ALA B 235 5 4 SHEET 1 AA 7 ASN A 132 GLY A 136 0 SHEET 2 AA 7 ALA A 115 LYS A 122 -1 O LEU A 116 N VAL A 134 SHEET 3 AA 7 VAL A 104 ASN A 112 -1 O GLY A 106 N CYS A 121 SHEET 4 AA 7 GLY A 82 LEU A 88 -1 O VAL A 83 N TYR A 109 SHEET 5 AA 7 GLY A 69 SER A 75 -1 O ALA A 71 N TRP A 86 SHEET 6 AA 7 GLN A 160 LEU A 164 -1 O GLN A 160 N LEU A 74 SHEET 7 AA 7 ALA A 169 SER A 170 -1 O SER A 170 N ASN A 163 SHEET 1 AB 4 THR A 154 LYS A 156 0 SHEET 2 AB 4 GLN A 141 GLU A 151 -1 O TYR A 149 N LYS A 156 SHEET 3 AB 4 VAL A 173 VAL A 184 -1 N SER A 174 O LEU A 150 SHEET 4 AB 4 LEU A 221 GLN A 230 -1 O LEU A 221 N VAL A 184 SHEET 1 BA 7 ASN B 132 GLY B 136 0 SHEET 2 BA 7 ALA B 115 LYS B 122 -1 O LEU B 116 N VAL B 134 SHEET 3 BA 7 VAL B 104 ASN B 112 -1 O GLY B 106 N CYS B 121 SHEET 4 BA 7 GLY B 82 LEU B 88 -1 O VAL B 83 N TYR B 109 SHEET 5 BA 7 GLY B 69 SER B 75 -1 O ALA B 71 N TRP B 86 SHEET 6 BA 7 GLN B 160 LEU B 164 -1 O GLN B 160 N LEU B 74 SHEET 7 BA 7 ALA B 169 SER B 170 -1 O SER B 170 N ASN B 163 SHEET 1 BB 4 THR B 154 LYS B 156 0 SHEET 2 BB 4 GLN B 141 GLU B 151 -1 O TYR B 149 N LYS B 156 SHEET 3 BB 4 VAL B 173 VAL B 184 -1 N SER B 174 O LEU B 150 SHEET 4 BB 4 LEU B 221 GLN B 230 -1 O LEU B 221 N VAL B 184 SSBOND 1 CYS A 89 CYS A 97 1555 1555 2.06 SSBOND 2 CYS A 121 CYS A 126 1555 1555 2.05 SSBOND 3 CYS B 89 CYS B 97 1555 1555 2.05 SSBOND 4 CYS B 121 CYS B 126 1555 1555 2.03 CISPEP 1 SER A 170 PRO A 171 0 -4.13 CISPEP 2 SER B 170 PRO B 171 0 -8.09 CRYST1 116.830 32.170 108.120 90.00 115.51 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008559 0.000000 0.004084 0.00000 SCALE2 0.000000 0.031085 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010248 0.00000 MTRIX1 1 -0.471500 0.132100 0.871900 -73.59610 1 MTRIX2 1 0.040300 -0.984500 0.170900 -26.54040 1 MTRIX3 1 0.881000 0.115700 0.458800 46.75140 1