data_5G39 # _entry.id 5G39 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5G39 pdb_00005g39 10.2210/pdb5g39/pdb PDBE EBI-66725 ? ? WWPDB D_1290066725 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-08-10 2 'Structure model' 1 1 2016-09-28 3 'Structure model' 1 2 2019-03-06 4 'Structure model' 1 3 2024-01-10 5 'Structure model' 1 4 2024-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Experimental preparation' 4 3 'Structure model' Other 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' Other 9 4 'Structure model' 'Refinement description' 10 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' exptl_crystal_grow 2 3 'Structure model' pdbx_database_proc 3 3 'Structure model' pdbx_database_status 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_database_status 8 4 'Structure model' pdbx_initial_refinement_model 9 4 'Structure model' pdbx_struct_conn_angle 10 4 'Structure model' struct_conn 11 4 'Structure model' struct_site 12 5 'Structure model' pdbx_entry_details 13 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_exptl_crystal_grow.method' 2 3 'Structure model' '_pdbx_database_status.recvd_author_approval' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_pdbx_database_status.status_code_sf' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.value' 17 4 'Structure model' '_struct_conn.pdbx_dist_value' 18 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 30 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 33 5 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5G39 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2016-04-24 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 5G38 unspecified 'PSBO SUBUNIT OF PHOTOSYSTEM II, BETA BARREL DOMAIN AT 100K, PH 6' PDB 5G3A unspecified 'PSBO SUBUNIT OF PHOTOSYSTEM II, BETA BARREL DOMAIN AT 100K, PH 10' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bommer, M.' 1 'Bondar, A.N.' 2 'Zouni, A.' 3 'Dobbek, H.' 4 'Dau, H.' 5 # _citation.id primary _citation.title ;Crystallographic and Computational Analysis of the Barrel Part of the Psbo Protein of Photosystem II -Carboxylate-Water Clusters as Putative Proton Transfer Relays and Structural Switches ; _citation.journal_abbrev Biochemistry _citation.journal_volume 55 _citation.page_first 4626 _citation.page_last ? _citation.year 2016 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 27454911 _citation.pdbx_database_id_DOI 10.1021/ACS.BIOCHEM.6B00441 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bommer, M.' 1 ? primary 'Bondar, A.N.' 2 ? primary 'Zouni, A.' 3 ? primary 'Dobbek, H.' 4 ? primary 'Dau, H.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PHOTOSYSTEM II MANGANESE-STABILIZING POLYPEPTIDE' 18621.721 1 ? ? 'BETA BARREL DOMAIN, RESIDUES 45-272' 'LOOPS 55-63,149-192 AND 220-231 DELETED' 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 water nat water 18.015 68 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;CPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKENGEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQP VTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVNGTKGQISLNVAKVDGRTGEIAGTFESEQLSNGHEVK IQGVFYASIEPA ; _entity_poly.pdbx_seq_one_letter_code_can ;CPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKENGEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQP VTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVNGTKGQISLNVAKVDGRTGEIAGTFESEQLSNGHEVK IQGVFYASIEPA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CYS n 1 2 PRO n 1 3 THR n 1 4 LEU n 1 5 ASP n 1 6 ASP n 1 7 THR n 1 8 ALA n 1 9 ARG n 1 10 GLY n 1 11 ALA n 1 12 TYR n 1 13 PRO n 1 14 ILE n 1 15 ASP n 1 16 SER n 1 17 SER n 1 18 GLN n 1 19 THR n 1 20 TYR n 1 21 ARG n 1 22 ILE n 1 23 ALA n 1 24 ARG n 1 25 LEU n 1 26 CYS n 1 27 LEU n 1 28 GLN n 1 29 PRO n 1 30 THR n 1 31 THR n 1 32 PHE n 1 33 LEU n 1 34 VAL n 1 35 LYS n 1 36 GLU n 1 37 ASN n 1 38 GLY n 1 39 GLU n 1 40 PHE n 1 41 VAL n 1 42 PRO n 1 43 THR n 1 44 LYS n 1 45 LEU n 1 46 VAL n 1 47 THR n 1 48 ARG n 1 49 GLU n 1 50 THR n 1 51 THR n 1 52 SER n 1 53 LEU n 1 54 ASP n 1 55 GLN n 1 56 ILE n 1 57 GLN n 1 58 GLY n 1 59 GLU n 1 60 LEU n 1 61 LYS n 1 62 VAL n 1 63 ASN n 1 64 SER n 1 65 ASP n 1 66 GLY n 1 67 SER n 1 68 LEU n 1 69 THR n 1 70 PHE n 1 71 VAL n 1 72 GLU n 1 73 GLU n 1 74 ASP n 1 75 GLY n 1 76 ILE n 1 77 ASP n 1 78 PHE n 1 79 GLN n 1 80 PRO n 1 81 VAL n 1 82 THR n 1 83 VAL n 1 84 GLN n 1 85 MET n 1 86 ALA n 1 87 GLY n 1 88 GLY n 1 89 GLU n 1 90 ARG n 1 91 ILE n 1 92 PRO n 1 93 LEU n 1 94 LEU n 1 95 PHE n 1 96 THR n 1 97 VAL n 1 98 LYS n 1 99 ASN n 1 100 LEU n 1 101 VAL n 1 102 ALA n 1 103 SER n 1 104 THR n 1 105 GLN n 1 106 PRO n 1 107 ASN n 1 108 VAL n 1 109 THR n 1 110 SER n 1 111 ILE n 1 112 THR n 1 113 THR n 1 114 SER n 1 115 THR n 1 116 ASP n 1 117 PHE n 1 118 LYS n 1 119 GLY n 1 120 GLU n 1 121 PHE n 1 122 ASN n 1 123 VAL n 1 124 ASN n 1 125 GLY n 1 126 THR n 1 127 LYS n 1 128 GLY n 1 129 GLN n 1 130 ILE n 1 131 SER n 1 132 LEU n 1 133 ASN n 1 134 VAL n 1 135 ALA n 1 136 LYS n 1 137 VAL n 1 138 ASP n 1 139 GLY n 1 140 ARG n 1 141 THR n 1 142 GLY n 1 143 GLU n 1 144 ILE n 1 145 ALA n 1 146 GLY n 1 147 THR n 1 148 PHE n 1 149 GLU n 1 150 SER n 1 151 GLU n 1 152 GLN n 1 153 LEU n 1 154 SER n 1 155 ASN n 1 156 GLY n 1 157 HIS n 1 158 GLU n 1 159 VAL n 1 160 LYS n 1 161 ILE n 1 162 GLN n 1 163 GLY n 1 164 VAL n 1 165 PHE n 1 166 TYR n 1 167 ALA n 1 168 SER n 1 169 ILE n 1 170 GLU n 1 171 PRO n 1 172 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain BP-1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'THERMOSYNECHOCOCCUS ELONGATUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 197221 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET-28A _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CYS 1 19 19 CYS CYS A . n A 1 2 PRO 2 20 20 PRO PRO A . n A 1 3 THR 3 21 21 THR THR A . n A 1 4 LEU 4 22 22 LEU LEU A . n A 1 5 ASP 5 23 23 ASP ASP A . n A 1 6 ASP 6 24 24 ASP ASP A . n A 1 7 THR 7 25 25 THR THR A . n A 1 8 ALA 8 26 26 ALA ALA A . n A 1 9 ARG 9 27 27 ARG ARG A . n A 1 10 GLY 10 28 28 GLY GLY A . n A 1 11 ALA 11 29 29 ALA ALA A . n A 1 12 TYR 12 30 30 TYR TYR A . n A 1 13 PRO 13 31 31 PRO PRO A . n A 1 14 ILE 14 32 32 ILE ILE A . n A 1 15 ASP 15 33 33 ASP ASP A . n A 1 16 SER 16 34 34 SER SER A . n A 1 17 SER 17 35 35 SER SER A . n A 1 18 GLN 18 36 36 GLN GLN A . n A 1 19 THR 19 37 37 THR THR A . n A 1 20 TYR 20 38 38 TYR TYR A . n A 1 21 ARG 21 39 39 ARG ARG A . n A 1 22 ILE 22 40 40 ILE ILE A . n A 1 23 ALA 23 41 41 ALA ALA A . n A 1 24 ARG 24 42 42 ARG ARG A . n A 1 25 LEU 25 43 43 LEU LEU A . n A 1 26 CYS 26 44 44 CYS CYS A . n A 1 27 LEU 27 45 45 LEU LEU A . n A 1 28 GLN 28 46 46 GLN GLN A . n A 1 29 PRO 29 47 47 PRO PRO A . n A 1 30 THR 30 48 48 THR THR A . n A 1 31 THR 31 49 49 THR THR A . n A 1 32 PHE 32 50 50 PHE PHE A . n A 1 33 LEU 33 51 51 LEU LEU A . n A 1 34 VAL 34 52 52 VAL VAL A . n A 1 35 LYS 35 53 53 LYS LYS A . n A 1 36 GLU 36 54 54 GLU GLU A . n A 1 37 ASN 37 55 55 ASN ASN A . n A 1 38 GLY 38 56 56 GLY GLY A . n A 1 39 GLU 39 57 57 GLU GLU A . n A 1 40 PHE 40 58 58 PHE PHE A . n A 1 41 VAL 41 59 59 VAL VAL A . n A 1 42 PRO 42 60 60 PRO PRO A . n A 1 43 THR 43 61 61 THR THR A . n A 1 44 LYS 44 62 62 LYS LYS A . n A 1 45 LEU 45 63 63 LEU LEU A . n A 1 46 VAL 46 64 64 VAL VAL A . n A 1 47 THR 47 65 65 THR THR A . n A 1 48 ARG 48 66 66 ARG ARG A . n A 1 49 GLU 49 67 67 GLU GLU A . n A 1 50 THR 50 68 68 THR THR A . n A 1 51 THR 51 69 69 THR THR A . n A 1 52 SER 52 70 70 SER SER A . n A 1 53 LEU 53 71 71 LEU LEU A . n A 1 54 ASP 54 72 72 ASP ASP A . n A 1 55 GLN 55 73 73 GLN GLN A . n A 1 56 ILE 56 74 74 ILE ILE A . n A 1 57 GLN 57 75 75 GLN GLN A . n A 1 58 GLY 58 76 76 GLY GLY A . n A 1 59 GLU 59 77 77 GLU GLU A . n A 1 60 LEU 60 78 78 LEU LEU A . n A 1 61 LYS 61 79 79 LYS LYS A . n A 1 62 VAL 62 80 80 VAL VAL A . n A 1 63 ASN 63 81 81 ASN ASN A . n A 1 64 SER 64 82 82 SER SER A . n A 1 65 ASP 65 83 83 ASP ASP A . n A 1 66 GLY 66 84 84 GLY GLY A . n A 1 67 SER 67 85 85 SER SER A . n A 1 68 LEU 68 86 86 LEU LEU A . n A 1 69 THR 69 87 87 THR THR A . n A 1 70 PHE 70 88 88 PHE PHE A . n A 1 71 VAL 71 89 89 VAL VAL A . n A 1 72 GLU 72 90 90 GLU GLU A . n A 1 73 GLU 73 91 91 GLU GLU A . n A 1 74 ASP 74 92 92 ASP ASP A . n A 1 75 GLY 75 93 93 GLY GLY A . n A 1 76 ILE 76 94 94 ILE ILE A . n A 1 77 ASP 77 95 95 ASP ASP A . n A 1 78 PHE 78 96 96 PHE PHE A . n A 1 79 GLN 79 97 97 GLN GLN A . n A 1 80 PRO 80 98 98 PRO PRO A . n A 1 81 VAL 81 99 99 VAL VAL A . n A 1 82 THR 82 100 100 THR THR A . n A 1 83 VAL 83 101 101 VAL VAL A . n A 1 84 GLN 84 102 102 GLN GLN A . n A 1 85 MET 85 103 103 MET MET A . n A 1 86 ALA 86 104 104 ALA ALA A . n A 1 87 GLY 87 105 105 GLY GLY A . n A 1 88 GLY 88 106 106 GLY GLY A . n A 1 89 GLU 89 107 107 GLU GLU A . n A 1 90 ARG 90 108 108 ARG ARG A . n A 1 91 ILE 91 109 109 ILE ILE A . n A 1 92 PRO 92 110 110 PRO PRO A . n A 1 93 LEU 93 111 111 LEU LEU A . n A 1 94 LEU 94 112 112 LEU LEU A . n A 1 95 PHE 95 113 113 PHE PHE A . n A 1 96 THR 96 114 114 THR THR A . n A 1 97 VAL 97 115 115 VAL VAL A . n A 1 98 LYS 98 116 116 LYS LYS A . n A 1 99 ASN 99 117 117 ASN ASN A . n A 1 100 LEU 100 118 118 LEU LEU A . n A 1 101 VAL 101 119 119 VAL VAL A . n A 1 102 ALA 102 120 120 ALA ALA A . n A 1 103 SER 103 121 121 SER SER A . n A 1 104 THR 104 122 122 THR THR A . n A 1 105 GLN 105 123 123 GLN GLN A . n A 1 106 PRO 106 124 124 PRO PRO A . n A 1 107 ASN 107 125 125 ASN ASN A . n A 1 108 VAL 108 126 126 VAL VAL A . n A 1 109 THR 109 127 127 THR THR A . n A 1 110 SER 110 128 128 SER SER A . n A 1 111 ILE 111 129 129 ILE ILE A . n A 1 112 THR 112 130 130 THR THR A . n A 1 113 THR 113 131 131 THR THR A . n A 1 114 SER 114 132 132 SER SER A . n A 1 115 THR 115 133 133 THR THR A . n A 1 116 ASP 116 134 134 ASP ASP A . n A 1 117 PHE 117 135 135 PHE PHE A . n A 1 118 LYS 118 136 136 LYS LYS A . n A 1 119 GLY 119 137 137 GLY GLY A . n A 1 120 GLU 120 138 138 GLU GLU A . n A 1 121 PHE 121 139 139 PHE PHE A . n A 1 122 ASN 122 140 140 ASN ASN A . n A 1 123 VAL 123 141 141 VAL VAL A . n A 1 124 ASN 124 142 142 ASN ASN A . n A 1 125 GLY 125 143 143 GLY GLY A . n A 1 126 THR 126 144 144 THR THR A . n A 1 127 LYS 127 145 145 LYS LYS A . n A 1 128 GLY 128 146 146 GLY GLY A . n A 1 129 GLN 129 147 147 GLN GLN A . n A 1 130 ILE 130 148 148 ILE ILE A . n A 1 131 SER 131 149 149 SER SER A . n A 1 132 LEU 132 150 150 LEU LEU A . n A 1 133 ASN 133 151 151 ASN ASN A . n A 1 134 VAL 134 152 152 VAL VAL A . n A 1 135 ALA 135 153 153 ALA ALA A . n A 1 136 LYS 136 154 154 LYS LYS A . n A 1 137 VAL 137 155 155 VAL VAL A . n A 1 138 ASP 138 156 156 ASP ASP A . n A 1 139 GLY 139 157 157 GLY GLY A . n A 1 140 ARG 140 158 158 ARG ARG A . n A 1 141 THR 141 159 159 THR THR A . n A 1 142 GLY 142 160 160 GLY GLY A . n A 1 143 GLU 143 161 161 GLU GLU A . n A 1 144 ILE 144 162 162 ILE ILE A . n A 1 145 ALA 145 163 163 ALA ALA A . n A 1 146 GLY 146 164 164 GLY GLY A . n A 1 147 THR 147 165 165 THR THR A . n A 1 148 PHE 148 166 166 PHE PHE A . n A 1 149 GLU 149 167 167 GLU GLU A . n A 1 150 SER 150 168 168 SER SER A . n A 1 151 GLU 151 169 169 GLU GLU A . n A 1 152 GLN 152 170 170 GLN GLN A . n A 1 153 LEU 153 171 171 LEU LEU A . n A 1 154 SER 154 172 172 SER SER A . n A 1 155 ASN 155 173 173 ASN ASN A . n A 1 156 GLY 156 174 174 GLY GLY A . n A 1 157 HIS 157 175 175 HIS HIS A . n A 1 158 GLU 158 176 176 GLU GLU A . n A 1 159 VAL 159 177 177 VAL VAL A . n A 1 160 LYS 160 178 178 LYS LYS A . n A 1 161 ILE 161 179 179 ILE ILE A . n A 1 162 GLN 162 180 180 GLN GLN A . n A 1 163 GLY 163 181 181 GLY GLY A . n A 1 164 VAL 164 182 182 VAL VAL A . n A 1 165 PHE 165 183 183 PHE PHE A . n A 1 166 TYR 166 184 184 TYR TYR A . n A 1 167 ALA 167 185 185 ALA ALA A . n A 1 168 SER 168 186 186 SER SER A . n A 1 169 ILE 169 187 187 ILE ILE A . n A 1 170 GLU 170 188 188 GLU GLU A . n A 1 171 PRO 171 189 189 PRO PRO A . n A 1 172 ALA 172 190 190 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 191 191 CA CA A . C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . C 3 HOH 5 2005 2005 HOH HOH A . C 3 HOH 6 2006 2006 HOH HOH A . C 3 HOH 7 2007 2007 HOH HOH A . C 3 HOH 8 2008 2008 HOH HOH A . C 3 HOH 9 2009 2009 HOH HOH A . C 3 HOH 10 2010 2010 HOH HOH A . C 3 HOH 11 2011 2011 HOH HOH A . C 3 HOH 12 2012 2012 HOH HOH A . C 3 HOH 13 2013 2013 HOH HOH A . C 3 HOH 14 2014 2014 HOH HOH A . C 3 HOH 15 2015 2015 HOH HOH A . C 3 HOH 16 2016 2016 HOH HOH A . C 3 HOH 17 2017 2017 HOH HOH A . C 3 HOH 18 2018 2018 HOH HOH A . C 3 HOH 19 2019 2019 HOH HOH A . C 3 HOH 20 2020 2020 HOH HOH A . C 3 HOH 21 2021 2021 HOH HOH A . C 3 HOH 22 2022 2022 HOH HOH A . C 3 HOH 23 2023 2023 HOH HOH A . C 3 HOH 24 2024 2024 HOH HOH A . C 3 HOH 25 2025 2025 HOH HOH A . C 3 HOH 26 2026 2026 HOH HOH A . C 3 HOH 27 2027 2027 HOH HOH A . C 3 HOH 28 2028 2028 HOH HOH A . C 3 HOH 29 2029 2029 HOH HOH A . C 3 HOH 30 2030 2030 HOH HOH A . C 3 HOH 31 2031 2031 HOH HOH A . C 3 HOH 32 2032 2032 HOH HOH A . C 3 HOH 33 2033 2033 HOH HOH A . C 3 HOH 34 2034 2034 HOH HOH A . C 3 HOH 35 2035 2035 HOH HOH A . C 3 HOH 36 2036 2036 HOH HOH A . C 3 HOH 37 2037 2037 HOH HOH A . C 3 HOH 38 2038 2038 HOH HOH A . C 3 HOH 39 2039 2039 HOH HOH A . C 3 HOH 40 2040 2040 HOH HOH A . C 3 HOH 41 2041 2041 HOH HOH A . C 3 HOH 42 2042 2042 HOH HOH A . C 3 HOH 43 2043 2043 HOH HOH A . C 3 HOH 44 2044 2044 HOH HOH A . C 3 HOH 45 2045 2045 HOH HOH A . C 3 HOH 46 2046 2046 HOH HOH A . C 3 HOH 47 2047 2047 HOH HOH A . C 3 HOH 48 2048 2048 HOH HOH A . C 3 HOH 49 2049 2049 HOH HOH A . C 3 HOH 50 2050 2050 HOH HOH A . C 3 HOH 51 2051 2051 HOH HOH A . C 3 HOH 52 2052 2052 HOH HOH A . C 3 HOH 53 2053 2053 HOH HOH A . C 3 HOH 54 2054 2054 HOH HOH A . C 3 HOH 55 2055 2055 HOH HOH A . C 3 HOH 56 2056 2056 HOH HOH A . C 3 HOH 57 2057 2057 HOH HOH A . C 3 HOH 58 2058 2058 HOH HOH A . C 3 HOH 59 2059 2059 HOH HOH A . C 3 HOH 60 2060 2060 HOH HOH A . C 3 HOH 61 2062 2062 HOH HOH A . C 3 HOH 62 2063 2063 HOH HOH A . C 3 HOH 63 2064 2064 HOH HOH A . C 3 HOH 64 2065 2065 HOH HOH A . C 3 HOH 65 2066 2066 HOH HOH A . C 3 HOH 66 2067 2067 HOH HOH A . C 3 HOH 67 2068 2068 HOH HOH A . C 3 HOH 68 2069 2069 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 XDS 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 5G39 _cell.length_a 55.710 _cell.length_b 55.710 _cell.length_c 194.540 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5G39 _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 # _exptl.entry_id 5G39 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.21 _exptl_crystal.density_percent_sol 44.3 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'VAPOR DIFFUSION 30 MG/ML PROTEIN, 0.1 M MES-NA PH 6, 0.2 M CALCIUM ACETATE, 30% PEG 400, 0.01 M TCEP' # _diffrn.id 1 _diffrn.ambient_temp 297 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2015-09-05 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI-111 CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8900 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.3' _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.3 _diffrn_source.pdbx_wavelength 0.8900 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5G39 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 21.13 _reflns.d_resolution_high 1.50 _reflns.number_obs 29709 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.12 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.97 _reflns.B_iso_Wilson_estimate 18.23 _reflns.pdbx_redundancy 24.5 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.55 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.69 _reflns_shell.pdbx_redundancy 24.9 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5G39 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 29703 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 21.715 _refine.ls_d_res_high 1.500 _refine.ls_percent_reflns_obs 99.95 _refine.ls_R_factor_obs 0.1545 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1529 _refine.ls_R_factor_R_free 0.1833 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1485 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 28.61 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3WU2' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.15 _refine.pdbx_overall_phase_error 17.45 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1309 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 68 _refine_hist.number_atoms_total 1378 _refine_hist.d_res_high 1.500 _refine_hist.d_res_low 21.715 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.011 ? ? 1408 'X-RAY DIFFRACTION' ? f_angle_d 1.099 ? ? 1915 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 19.345 ? ? 851 'X-RAY DIFFRACTION' ? f_chiral_restr 0.082 ? ? 226 'X-RAY DIFFRACTION' ? f_plane_restr 0.006 ? ? 256 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.5000 1.5484 2506 0.2215 100.00 0.2960 . . 132 . . 'X-RAY DIFFRACTION' . 1.5484 1.6037 2473 0.1953 100.00 0.2702 . . 130 . . 'X-RAY DIFFRACTION' . 1.6037 1.6679 2511 0.1673 100.00 0.2525 . . 132 . . 'X-RAY DIFFRACTION' . 1.6679 1.7438 2531 0.1516 100.00 0.2082 . . 134 . . 'X-RAY DIFFRACTION' . 1.7438 1.8357 2499 0.1290 100.00 0.1819 . . 131 . . 'X-RAY DIFFRACTION' . 1.8357 1.9506 2521 0.1146 100.00 0.1795 . . 133 . . 'X-RAY DIFFRACTION' . 1.9506 2.1011 2552 0.1068 100.00 0.1457 . . 134 . . 'X-RAY DIFFRACTION' . 2.1011 2.3124 2578 0.1205 100.00 0.1556 . . 136 . . 'X-RAY DIFFRACTION' . 2.3124 2.6465 2583 0.1527 100.00 0.1857 . . 136 . . 'X-RAY DIFFRACTION' . 2.6465 3.3323 2637 0.1762 100.00 0.1941 . . 138 . . 'X-RAY DIFFRACTION' . 3.3323 21.7174 2827 0.1628 100.00 0.1722 . . 149 . . # _database_PDB_matrix.entry_id 5G39 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 5G39 _struct.title 'PsbO subunit of Photosystem II, beta barrel domain at 297K, pH 6' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5G39 _struct_keywords.pdbx_keywords PHOTOSYNTHESIS _struct_keywords.text 'PHOTOSYNTHESIS, CARBOXYLATE CLUSTER, PH, PROTON ANTENNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PSBO_SYNEL _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P0A432 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5G39 A 1 ? 36 ? P0A432 45 ? 80 ? 19 54 2 1 5G39 A 39 ? 123 ? P0A432 90 ? 174 ? 57 141 3 1 5G39 A 126 ? 154 ? P0A432 219 ? 247 ? 144 172 4 1 5G39 A 157 ? 172 ? P0A432 257 ? 272 ? 175 190 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5G39 ASN A 37 ? UNP P0A432 ? ? linker 55 1 1 5G39 GLY A 38 ? UNP P0A432 ? ? linker 56 2 1 5G39 ASN A 124 ? UNP P0A432 ? ? linker 142 3 1 5G39 GLY A 125 ? UNP P0A432 ? ? linker 143 4 1 5G39 ASN A 155 ? UNP P0A432 ? ? linker 173 5 1 5G39 GLY A 156 ? UNP P0A432 ? ? linker 174 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 1 SG ? ? ? 1_555 A CYS 26 SG ? ? A CYS 19 A CYS 44 1_555 ? ? ? ? ? ? ? 1.998 ? ? metalc1 metalc ? ? A THR 113 O ? ? ? 1_555 B CA . CA ? ? A THR 131 A CA 191 1_555 ? ? ? ? ? ? ? 2.348 ? ? metalc2 metalc ? ? A ASN 133 OD1 ? ? ? 1_555 B CA . CA ? ? A ASN 151 A CA 191 1_555 ? ? ? ? ? ? ? 2.333 ? ? metalc3 metalc ? ? A VAL 134 O ? ? ? 1_555 B CA . CA ? ? A VAL 152 A CA 191 1_555 ? ? ? ? ? ? ? 2.353 ? ? metalc4 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? A CA 191 A HOH 2051 1_555 ? ? ? ? ? ? ? 2.382 ? ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? A CA 191 A HOH 2052 1_555 ? ? ? ? ? ? ? 2.439 ? ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? A CA 191 A HOH 2057 1_555 ? ? ? ? ? ? ? 2.372 ? ? metalc7 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? A CA 191 A HOH 2058 1_555 ? ? ? ? ? ? ? 2.499 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A THR 113 ? A THR 131 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 OD1 ? A ASN 133 ? A ASN 151 ? 1_555 145.5 ? 2 O ? A THR 113 ? A THR 131 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? A VAL 134 ? A VAL 152 ? 1_555 72.6 ? 3 OD1 ? A ASN 133 ? A ASN 151 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? A VAL 134 ? A VAL 152 ? 1_555 78.9 ? 4 O ? A THR 113 ? A THR 131 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2051 ? 1_555 81.8 ? 5 OD1 ? A ASN 133 ? A ASN 151 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2051 ? 1_555 80.8 ? 6 O ? A VAL 134 ? A VAL 152 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2051 ? 1_555 93.4 ? 7 O ? A THR 113 ? A THR 131 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2052 ? 1_555 70.1 ? 8 OD1 ? A ASN 133 ? A ASN 151 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2052 ? 1_555 143.5 ? 9 O ? A VAL 134 ? A VAL 152 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2052 ? 1_555 135.5 ? 10 O ? C HOH . ? A HOH 2051 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2052 ? 1_555 104.3 ? 11 O ? A THR 113 ? A THR 131 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2057 ? 1_555 106.2 ? 12 OD1 ? A ASN 133 ? A ASN 151 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2057 ? 1_555 89.5 ? 13 O ? A VAL 134 ? A VAL 152 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2057 ? 1_555 84.1 ? 14 O ? C HOH . ? A HOH 2051 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2057 ? 1_555 170.4 ? 15 O ? C HOH . ? A HOH 2052 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2057 ? 1_555 83.8 ? 16 O ? A THR 113 ? A THR 131 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2058 ? 1_555 129.6 ? 17 OD1 ? A ASN 133 ? A ASN 151 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2058 ? 1_555 76.3 ? 18 O ? A VAL 134 ? A VAL 152 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2058 ? 1_555 155.1 ? 19 O ? C HOH . ? A HOH 2051 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2058 ? 1_555 80.9 ? 20 O ? C HOH . ? A HOH 2052 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2058 ? 1_555 69.0 ? 21 O ? C HOH . ? A HOH 2057 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? C HOH . ? A HOH 2058 ? 1_555 97.5 ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 1 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 26 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 19 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 44 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details 1 ? 1 ? 2 ? 1 ? 3 ? 1 ? 4 ? 1 ? 5 ? 1 ? 6 ? 1 ? 7 ? 1 ? 8 ? 1 ? 9 ? 1 ? 10 ? 1 ? 11 ? 1 ? 12 ? 1 ? 13 ? 1 ? 14 ? 1 ? 15 ? 1 ? # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id 1 1 TYR A 12 ? PRO A 13 ? TYR A 30 PRO A 31 2 1 TYR A 20 ? GLU A 36 ? TYR A 38 GLU A 54 3 1 GLU A 39 ? PRO A 42 ? GLU A 57 PRO A 60 4 1 LYS A 44 ? LEU A 45 ? LYS A 62 LEU A 63 5 1 LEU A 53 ? VAL A 62 ? LEU A 71 VAL A 80 6 1 LEU A 68 ? VAL A 71 ? LEU A 86 VAL A 89 7 1 ASP A 74 ? ILE A 76 ? ASP A 92 ILE A 94 8 1 PHE A 78 ? GLN A 84 ? PHE A 96 GLN A 102 9 1 ARG A 90 ? THR A 96 ? ARG A 108 THR A 114 10 1 VAL A 101 ? SER A 103 ? VAL A 119 SER A 121 11 1 SER A 110 ? ILE A 111 ? SER A 128 ILE A 129 12 1 ASP A 116 ? VAL A 123 ? ASP A 134 VAL A 141 13 1 THR A 126 ? ASP A 138 ? THR A 144 ASP A 156 14 1 GLU A 143 ? SER A 154 ? GLU A 161 SER A 172 15 1 HIS A 157 ? PRO A 171 ? HIS A 175 PRO A 189 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CA _struct_site.pdbx_auth_seq_id 191 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE CA A 191' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 THR A 113 ? THR A 131 . ? 1_555 ? 2 AC1 7 ASN A 133 ? ASN A 151 . ? 1_555 ? 3 AC1 7 VAL A 134 ? VAL A 152 . ? 1_555 ? 4 AC1 7 HOH C . ? HOH A 2051 . ? 1_555 ? 5 AC1 7 HOH C . ? HOH A 2052 . ? 1_555 ? 6 AC1 7 HOH C . ? HOH A 2057 . ? 1_555 ? 7 AC1 7 HOH C . ? HOH A 2058 . ? 1_555 ? # _pdbx_entry_details.entry_id 5G39 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;LOOPS 55-63, 149-192 AND 220-231 REPLACED WITH A BETA HAIRPIN OF SEQUENCE NG ; _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 67 ? ? -67.86 -178.87 2 1 ASN A 142 ? ? 50.39 -107.42 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2067 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_database_remark.id 700 _pdbx_database_remark.text ; SHEET DETERMINATION METHOD: AUTHOR PROVIDED. ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 THR N N N N 305 THR CA C N S 306 THR C C N N 307 THR O O N N 308 THR CB C N R 309 THR OG1 O N N 310 THR CG2 C N N 311 THR OXT O N N 312 THR H H N N 313 THR H2 H N N 314 THR HA H N N 315 THR HB H N N 316 THR HG1 H N N 317 THR HG21 H N N 318 THR HG22 H N N 319 THR HG23 H N N 320 THR HXT H N N 321 TYR N N N N 322 TYR CA C N S 323 TYR C C N N 324 TYR O O N N 325 TYR CB C N N 326 TYR CG C Y N 327 TYR CD1 C Y N 328 TYR CD2 C Y N 329 TYR CE1 C Y N 330 TYR CE2 C Y N 331 TYR CZ C Y N 332 TYR OH O N N 333 TYR OXT O N N 334 TYR H H N N 335 TYR H2 H N N 336 TYR HA H N N 337 TYR HB2 H N N 338 TYR HB3 H N N 339 TYR HD1 H N N 340 TYR HD2 H N N 341 TYR HE1 H N N 342 TYR HE2 H N N 343 TYR HH H N N 344 TYR HXT H N N 345 VAL N N N N 346 VAL CA C N S 347 VAL C C N N 348 VAL O O N N 349 VAL CB C N N 350 VAL CG1 C N N 351 VAL CG2 C N N 352 VAL OXT O N N 353 VAL H H N N 354 VAL H2 H N N 355 VAL HA H N N 356 VAL HB H N N 357 VAL HG11 H N N 358 VAL HG12 H N N 359 VAL HG13 H N N 360 VAL HG21 H N N 361 VAL HG22 H N N 362 VAL HG23 H N N 363 VAL HXT H N N 364 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TYR N CA sing N N 306 TYR N H sing N N 307 TYR N H2 sing N N 308 TYR CA C sing N N 309 TYR CA CB sing N N 310 TYR CA HA sing N N 311 TYR C O doub N N 312 TYR C OXT sing N N 313 TYR CB CG sing N N 314 TYR CB HB2 sing N N 315 TYR CB HB3 sing N N 316 TYR CG CD1 doub Y N 317 TYR CG CD2 sing Y N 318 TYR CD1 CE1 sing Y N 319 TYR CD1 HD1 sing N N 320 TYR CD2 CE2 doub Y N 321 TYR CD2 HD2 sing N N 322 TYR CE1 CZ doub Y N 323 TYR CE1 HE1 sing N N 324 TYR CE2 CZ sing Y N 325 TYR CE2 HE2 sing N N 326 TYR CZ OH sing N N 327 TYR OH HH sing N N 328 TYR OXT HXT sing N N 329 VAL N CA sing N N 330 VAL N H sing N N 331 VAL N H2 sing N N 332 VAL CA C sing N N 333 VAL CA CB sing N N 334 VAL CA HA sing N N 335 VAL C O doub N N 336 VAL C OXT sing N N 337 VAL CB CG1 sing N N 338 VAL CB CG2 sing N N 339 VAL CB HB sing N N 340 VAL CG1 HG11 sing N N 341 VAL CG1 HG12 sing N N 342 VAL CG1 HG13 sing N N 343 VAL CG2 HG21 sing N N 344 VAL CG2 HG22 sing N N 345 VAL CG2 HG23 sing N N 346 VAL OXT HXT sing N N 347 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3WU2 _pdbx_initial_refinement_model.details 'PDB ENTRY 3WU2' # _atom_sites.entry_id 5G39 _atom_sites.fract_transf_matrix[1][1] 0.017950 _atom_sites.fract_transf_matrix[1][2] 0.010363 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020727 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005140 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_