HEADER OXIDOREDUCTASE 13-MAY-16 5G4L TITLE PHLOROGLUCINOL REDUCTASE FROM CLOSTRIDIUM SP. WITH BOUND NADPH COMPND MOL_ID: 1; COMPND 2 MOLECULE: OXIDOREDUCTASE, SHORT CHAIN DEHYDROGENASE/REDUCTASE FAMILY COMPND 3 PROTEIN; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: PHLOROGLUCINOL REDUCTASE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM SP.; SOURCE 3 ORGANISM_TAXID: 1506; SOURCE 4 ATCC: BAA-442; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET19B KEYWDS OXIDOREDUCTASE, FLAVONOID DEGRADATION, ENZYME CATALYSIS, KEYWDS 2 DEAROMATISATION REACTION, SHORT-CHAIN DEHYDROGENASES/REDUCTASES, KEYWDS 3 NADPH DEPENDENT ENZYME EXPDTA X-RAY DIFFRACTION AUTHOR D.CONRADT,B.HERMANN,S.GERHARDT,O.EINSLE,M.MUELLER REVDAT 3 10-JAN-24 5G4L 1 REMARK REVDAT 2 14-DEC-16 5G4L 1 JRNL REVDAT 1 07-DEC-16 5G4L 0 JRNL AUTH D.CONRADT,B.HERMANN,S.GERHARDT,O.EINSLE,M.MUELLER JRNL TITL BIOCATALYTIC PROPERTIES AND STRUCTURAL ANALYSIS OF JRNL TITL 2 PHLOROGLUCINOL REDUCTASES. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 55 15531 2016 JRNL REFN ISSN 1433-7851 JRNL PMID 27874239 JRNL DOI 10.1002/ANIE.201607494 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 57079 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.179 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 2816 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.85 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 4162 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2045 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3951 REMARK 3 BIN R VALUE (WORKING SET) : 0.2026 REMARK 3 BIN FREE R VALUE : 0.2391 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.07 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 211 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3985 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 96 REMARK 3 SOLVENT ATOMS : 580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.00240 REMARK 3 B22 (A**2) : 2.47790 REMARK 3 B33 (A**2) : -1.47540 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.193 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.112 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.100 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.102 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.095 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4534 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6162 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1578 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 118 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 699 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4534 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 586 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6039 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.99 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.66 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.03 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -0.4636 20.5185 14.1530 REMARK 3 T TENSOR REMARK 3 T11: -0.0032 T22: -0.0342 REMARK 3 T33: -0.0405 T12: 0.0019 REMARK 3 T13: -0.0051 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 0.4832 L22: 0.6215 REMARK 3 L33: 0.1041 L12: -0.0442 REMARK 3 L13: -0.0028 L23: -0.0128 REMARK 3 S TENSOR REMARK 3 S11: 0.0066 S12: 0.0494 S13: 0.1481 REMARK 3 S21: -0.1363 S22: -0.0160 S23: -0.0143 REMARK 3 S31: -0.0051 S32: 0.0006 S33: 0.0094 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -20.3801 2.8031 24.6132 REMARK 3 T TENSOR REMARK 3 T11: -0.0308 T22: -0.0217 REMARK 3 T33: -0.0260 T12: 0.0022 REMARK 3 T13: -0.0123 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 0.5424 L22: 0.5861 REMARK 3 L33: 0.0402 L12: -0.1355 REMARK 3 L13: -0.0067 L23: 0.0106 REMARK 3 S TENSOR REMARK 3 S11: -0.0133 S12: -0.0418 S13: -0.0138 REMARK 3 S21: -0.0186 S22: -0.0041 S23: 0.1758 REMARK 3 S31: 0.0036 S32: -0.0022 S33: 0.0174 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5G4L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1290066849. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57138 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 47.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.20 REMARK 200 R MERGE FOR SHELL (I) : 1.17000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 5G4K REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28 % PEG 3350 0.1 M BIS-TRIS, PH 7.2 REMARK 280 LI2SO4 3 MM NADPH REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 44.34300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.54150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.34300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 61.54150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 22210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -137.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B2018 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 GLY A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 HIS A -6 REMARK 465 ILE A -5 REMARK 465 ASP A -4 REMARK 465 ASP A -3 REMARK 465 ASP A -2 REMARK 465 LYS A -1 REMARK 465 MET B -21 REMARK 465 GLY B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 HIS B -6 REMARK 465 ILE B -5 REMARK 465 ASP B -4 REMARK 465 ASP B -3 REMARK 465 ASP B -2 REMARK 465 LYS B -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS B 0 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 153 -107.96 -100.58 REMARK 500 TYR A 217 47.83 -75.65 REMARK 500 GLN A 218 -41.10 -146.01 REMARK 500 THR B 153 -108.20 -99.56 REMARK 500 GLU B 213 44.57 -102.64 REMARK 500 TYR B 217 47.84 -75.90 REMARK 500 GLN B 218 -47.68 -145.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2061 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH A2078 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH B2033 DISTANCE = 5.83 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 1265 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 1265 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5G4K RELATED DB: PDB REMARK 900 PHLOROGLUCINOL REDUCTASE FROM CHOSTRIDIUM SP. APO-FORM REMARK 999 REMARK 999 SEQUENCE REMARK 999 N-TERMINAL DECA-HIS EXPRESSION TAG DBREF 5G4L A 1 264 UNP U2C7W9 U2C7W9_9CLOT 1 264 DBREF 5G4L B 1 264 UNP U2C7W9 U2C7W9_9CLOT 1 264 SEQADV 5G4L MET A -21 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L GLY A -20 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS A -19 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS A -18 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS A -17 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS A -16 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS A -15 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS A -14 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS A -13 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS A -12 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS A -11 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS A -10 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L SER A -9 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L SER A -8 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L GLY A -7 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS A -6 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L ILE A -5 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L ASP A -4 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L ASP A -3 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L ASP A -2 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L LYS A -1 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS A 0 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L MET B -21 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L GLY B -20 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS B -19 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS B -18 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS B -17 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS B -16 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS B -15 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS B -14 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS B -13 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS B -12 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS B -11 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS B -10 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L SER B -9 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L SER B -8 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L GLY B -7 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS B -6 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L ILE B -5 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L ASP B -4 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L ASP B -3 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L ASP B -2 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L LYS B -1 UNP U2C7W9 EXPRESSION TAG SEQADV 5G4L HIS B 0 UNP U2C7W9 EXPRESSION TAG SEQRES 1 A 286 MET GLY HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS SER SEQRES 2 A 286 SER GLY HIS ILE ASP ASP ASP LYS HIS MET VAL ASN VAL SEQRES 3 A 286 LYS LYS GLU PHE VAL ASP ASN MET PHE SER VAL LYS GLY SEQRES 4 A 286 LYS VAL ALA LEU VAL THR GLY ALA THR GLY ALA LEU GLY SEQRES 5 A 286 CYS VAL LEU SER LYS ALA TYR GLY TYR ALA GLY ALA LYS SEQRES 6 A 286 VAL PHE MET THR GLY ARG ASN GLU LYS LYS LEU GLN ALA SEQRES 7 A 286 LEU GLU ALA GLU PHE LYS ALA GLU GLY ILE ASP CYS ALA SEQRES 8 A 286 TYR GLY VAL ALA ASP PRO ALA ASP GLU ALA GLN VAL ASP SEQRES 9 A 286 ALA MET ILE THR ALA CYS VAL ALA GLN TYR GLY GLU VAL SEQRES 10 A 286 ASN ILE LEU ALA VAL THR HIS GLY PHE ASN LYS PRO GLN SEQRES 11 A 286 ASN ILE LEU GLU GLN SER VAL ALA ASP TRP GLN TYR ILE SEQRES 12 A 286 MET ASP ALA ASP CYS LYS SER VAL TYR VAL VAL CYS LYS SEQRES 13 A 286 TYR VAL ALA GLN GLN MET VAL ASP GLN GLY LYS GLY GLY SEQRES 14 A 286 LYS ILE VAL VAL VAL THR SER GLN ARG SER LYS ARG GLY SEQRES 15 A 286 MET ALA GLY TYR THR GLY TYR CYS THR SER LYS GLY GLY SEQRES 16 A 286 ALA ASP LEU MET VAL SER SER MET ALA CYS ASP LEU SER SEQRES 17 A 286 ALA LYS TYR GLY ILE ASN VAL ASN SER ILE CYS PRO THR SEQRES 18 A 286 VAL PHE ARG SER ASP LEU THR GLU TRP MET PHE ASP PRO SEQRES 19 A 286 GLU SER ALA VAL TYR GLN ASN PHE LEU LYS ARG GLU PRO SEQRES 20 A 286 ILE GLY ARG LEU ALA GLU PRO GLU ASP PHE VAL GLY TYR SEQRES 21 A 286 ALA LEU PHE LEU SER SER ASP ALA SER ASN TYR ILE THR SEQRES 22 A 286 GLY ALA ASN CYS ASP CYS SER GLY GLY TYR LEU THR CYS SEQRES 1 B 286 MET GLY HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS SER SEQRES 2 B 286 SER GLY HIS ILE ASP ASP ASP LYS HIS MET VAL ASN VAL SEQRES 3 B 286 LYS LYS GLU PHE VAL ASP ASN MET PHE SER VAL LYS GLY SEQRES 4 B 286 LYS VAL ALA LEU VAL THR GLY ALA THR GLY ALA LEU GLY SEQRES 5 B 286 CYS VAL LEU SER LYS ALA TYR GLY TYR ALA GLY ALA LYS SEQRES 6 B 286 VAL PHE MET THR GLY ARG ASN GLU LYS LYS LEU GLN ALA SEQRES 7 B 286 LEU GLU ALA GLU PHE LYS ALA GLU GLY ILE ASP CYS ALA SEQRES 8 B 286 TYR GLY VAL ALA ASP PRO ALA ASP GLU ALA GLN VAL ASP SEQRES 9 B 286 ALA MET ILE THR ALA CYS VAL ALA GLN TYR GLY GLU VAL SEQRES 10 B 286 ASN ILE LEU ALA VAL THR HIS GLY PHE ASN LYS PRO GLN SEQRES 11 B 286 ASN ILE LEU GLU GLN SER VAL ALA ASP TRP GLN TYR ILE SEQRES 12 B 286 MET ASP ALA ASP CYS LYS SER VAL TYR VAL VAL CYS LYS SEQRES 13 B 286 TYR VAL ALA GLN GLN MET VAL ASP GLN GLY LYS GLY GLY SEQRES 14 B 286 LYS ILE VAL VAL VAL THR SER GLN ARG SER LYS ARG GLY SEQRES 15 B 286 MET ALA GLY TYR THR GLY TYR CYS THR SER LYS GLY GLY SEQRES 16 B 286 ALA ASP LEU MET VAL SER SER MET ALA CYS ASP LEU SER SEQRES 17 B 286 ALA LYS TYR GLY ILE ASN VAL ASN SER ILE CYS PRO THR SEQRES 18 B 286 VAL PHE ARG SER ASP LEU THR GLU TRP MET PHE ASP PRO SEQRES 19 B 286 GLU SER ALA VAL TYR GLN ASN PHE LEU LYS ARG GLU PRO SEQRES 20 B 286 ILE GLY ARG LEU ALA GLU PRO GLU ASP PHE VAL GLY TYR SEQRES 21 B 286 ALA LEU PHE LEU SER SER ASP ALA SER ASN TYR ILE THR SEQRES 22 B 286 GLY ALA ASN CYS ASP CYS SER GLY GLY TYR LEU THR CYS HET NDP A1265 48 HET NDP B1265 48 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE FORMUL 3 NDP 2(C21 H30 N7 O17 P3) FORMUL 5 HOH *580(H2 O) HELIX 1 1 LYS A 5 MET A 12 1 8 HELIX 2 2 GLY A 27 ALA A 40 1 14 HELIX 3 3 ASN A 50 ALA A 63 1 14 HELIX 4 4 ASP A 77 GLY A 93 1 17 HELIX 5 5 SER A 114 CYS A 126 1 13 HELIX 6 6 CYS A 126 GLY A 144 1 19 HELIX 7 7 SER A 154 LYS A 158 5 5 HELIX 8 8 TYR A 164 GLY A 190 1 27 HELIX 9 9 ARG A 202 THR A 206 5 5 HELIX 10 10 ALA A 215 ARG A 223 1 9 HELIX 11 11 GLU A 231 ASP A 234 5 4 HELIX 12 12 PHE A 235 LEU A 242 1 8 HELIX 13 13 SER A 243 ASN A 248 5 6 HELIX 14 14 GLY A 260 CYS A 264 5 5 HELIX 15 15 LYS B 5 MET B 12 1 8 HELIX 16 16 GLY B 27 ALA B 40 1 14 HELIX 17 17 ASN B 50 ALA B 63 1 14 HELIX 18 18 ASP B 77 GLY B 93 1 17 HELIX 19 19 SER B 114 CYS B 126 1 13 HELIX 20 20 CYS B 126 GLY B 144 1 19 HELIX 21 21 SER B 154 LYS B 158 5 5 HELIX 22 22 TYR B 164 GLY B 190 1 27 HELIX 23 23 ARG B 202 THR B 206 5 5 HELIX 24 24 ALA B 215 ARG B 223 1 9 HELIX 25 25 GLU B 231 ASP B 234 5 4 HELIX 26 26 PHE B 235 LEU B 242 1 8 HELIX 27 27 SER B 243 ASN B 248 5 6 HELIX 28 28 GLY B 260 CYS B 264 5 5 SHEET 1 AA 7 CYS A 68 VAL A 72 0 SHEET 2 AA 7 LYS A 43 GLY A 48 1 O VAL A 44 N ALA A 69 SHEET 3 AA 7 VAL A 19 THR A 23 1 O ALA A 20 N PHE A 45 SHEET 4 AA 7 ILE A 97 VAL A 100 1 O ILE A 97 N LEU A 21 SHEET 5 AA 7 GLY A 147 VAL A 152 1 O LYS A 148 N LEU A 98 SHEET 6 AA 7 ILE A 191 PRO A 198 1 O ASN A 192 N ILE A 149 SHEET 7 AA 7 ASN A 254 CYS A 257 1 O CYS A 255 N CYS A 197 SHEET 1 BA 7 CYS B 68 VAL B 72 0 SHEET 2 BA 7 LYS B 43 GLY B 48 1 O VAL B 44 N ALA B 69 SHEET 3 BA 7 VAL B 19 THR B 23 1 O ALA B 20 N PHE B 45 SHEET 4 BA 7 ILE B 97 VAL B 100 1 O ILE B 97 N LEU B 21 SHEET 5 BA 7 GLY B 147 VAL B 152 1 O LYS B 148 N LEU B 98 SHEET 6 BA 7 ILE B 191 PRO B 198 1 O ASN B 192 N ILE B 149 SHEET 7 BA 7 ASN B 254 CYS B 257 1 O CYS B 255 N CYS B 197 SITE 1 AC1 37 THR A 26 GLY A 27 ALA A 28 LEU A 29 SITE 2 AC1 37 GLY A 48 ARG A 49 ASN A 50 THR A 101 SITE 3 AC1 37 HIS A 102 GLY A 103 ALA A 124 VAL A 152 SITE 4 AC1 37 THR A 153 SER A 154 TYR A 167 LYS A 171 SITE 5 AC1 37 PRO A 198 THR A 199 VAL A 200 PHE A 201 SITE 6 AC1 37 ASP A 204 HOH A2049 HOH A2051 HOH A2057 SITE 7 AC1 37 HOH A2064 HOH A2098 HOH A2101 HOH A2135 SITE 8 AC1 37 HOH A2170 HOH A2172 HOH A2173 HOH A2194 SITE 9 AC1 37 HOH A2223 HOH A2254 HOH A2310 HOH A2311 SITE 10 AC1 37 HOH A2312 SITE 1 AC2 39 THR B 26 GLY B 27 ALA B 28 LEU B 29 SITE 2 AC2 39 GLY B 48 ARG B 49 ASN B 50 THR B 101 SITE 3 AC2 39 HIS B 102 GLY B 103 ALA B 124 VAL B 152 SITE 4 AC2 39 THR B 153 SER B 154 TYR B 167 LYS B 171 SITE 5 AC2 39 PRO B 198 THR B 199 VAL B 200 PHE B 201 SITE 6 AC2 39 ASP B 204 HOH B2028 HOH B2030 HOH B2034 SITE 7 AC2 39 HOH B2040 HOH B2073 HOH B2076 HOH B2116 SITE 8 AC2 39 HOH B2151 HOH B2153 HOH B2154 HOH B2175 SITE 9 AC2 39 HOH B2176 HOH B2200 HOH B2227 HOH B2265 SITE 10 AC2 39 HOH B2266 HOH B2267 HOH B2268 CRYST1 88.686 123.083 55.477 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011276 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008125 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018025 0.00000 MTRIX1 1 -0.176971 -0.984216 -0.000345 61.71180 1 MTRIX2 1 -0.984216 0.176971 0.000208 51.58470 1 MTRIX3 1 -0.000143 0.000377 -1.000000 38.98732 1