HEADER OXIDOREDUCTASE 23-JUN-16 5G6R TITLE IMINE REDUCTASE FROM ASPERGILLUS ORYZAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMINE REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.5.1.48; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; SOURCE 3 ORGANISM_TAXID: 5062; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET-28A KEYWDS OXIDOREDUCTASE, IMINE REDUCTASE, NADPH, AMINE EXPDTA X-RAY DIFFRACTION AUTHOR H.MAN,G.ALEKU,N.J.TURNER,G.GROGAN REVDAT 3 10-JAN-24 5G6R 1 REMARK REVDAT 2 04-OCT-17 5G6R 1 JRNL REVDAT 1 31-MAY-17 5G6R 0 JRNL AUTH G.A.ALEKU,S.P.FRANCE,H.MAN,J.MANGAS-SANCHEZ,S.L.MONTGOMERY, JRNL AUTH 2 M.SHARMA,F.LEIPOLD,S.HUSSAIN,G.GROGAN,N.J.TURNER JRNL TITL A REDUCTIVE AMINASE FROM ASPERGILLUS ORYZAE. JRNL REF NAT CHEM V. 9 961 2017 JRNL REFN ESSN 1755-4349 JRNL PMID 28937665 JRNL DOI 10.1038/NCHEM.2782 REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.82 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 50474 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2539 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.82 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3757 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.72 REMARK 3 BIN R VALUE (WORKING SET) : 0.3090 REMARK 3 BIN FREE R VALUE SET COUNT : 206 REMARK 3 BIN FREE R VALUE : 0.3250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4131 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 96 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.74000 REMARK 3 B22 (A**2) : -0.31000 REMARK 3 B33 (A**2) : -0.24000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.46000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.126 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.123 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.101 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.428 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4314 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4073 ; 0.007 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5893 ; 2.007 ; 1.999 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9344 ; 1.457 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 575 ; 5.264 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 136 ;32.401 ;25.368 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 656 ;15.609 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;30.194 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 717 ; 0.133 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4885 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 907 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2306 ; 3.619 ; 3.729 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2305 ; 3.616 ; 3.726 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2879 ; 4.768 ; 5.576 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2008 ; 4.854 ; 4.261 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 5G6R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1290066879. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53033 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 61.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.77000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5A9T REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.22000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -87.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLY A 291 REMARK 465 LYS A 292 REMARK 465 ASN A 293 REMARK 465 VAL A 294 REMARK 465 ASP A 295 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 LYS B 292 REMARK 465 ASN B 293 REMARK 465 VAL B 294 REMARK 465 ASP B 295 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 23 OE1 OE2 REMARK 470 LYS A 27 CG CD CE NZ REMARK 470 LYS A 37 CE NZ REMARK 470 GLN A 44 CG CD OE1 NE2 REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 ASP A 78 CG OD1 OD2 REMARK 470 GLN A 81 CG CD OE1 NE2 REMARK 470 LYS A 101 CG CD CE NZ REMARK 470 SER A 220 OG REMARK 470 LYS A 223 CE NZ REMARK 470 GLN A 233 CG CD OE1 NE2 REMARK 470 ARG A 249 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 255 CZ NH1 NH2 REMARK 470 LYS A 265 CE NZ REMARK 470 LYS A 289 CG CD CE NZ REMARK 470 GLU B 23 CG CD OE1 OE2 REMARK 470 LYS B 27 CG CD CE NZ REMARK 470 LYS B 37 CE NZ REMARK 470 LYS B 47 CG CD CE NZ REMARK 470 GLU B 54 CG CD OE1 OE2 REMARK 470 GLN B 70 CD OE1 NE2 REMARK 470 GLU B 73 CG CD OE1 OE2 REMARK 470 ARG B 77 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 80 CG CD1 CD2 REMARK 470 GLN B 81 CG CD OE1 NE2 REMARK 470 LYS B 101 CG CD CE NZ REMARK 470 ARG B 112 CZ NH1 NH2 REMARK 470 HIS B 129 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 140 CG CD OE1 OE2 REMARK 470 GLN B 143 CG CD OE1 NE2 REMARK 470 GLU B 146 CG CD OE1 OE2 REMARK 470 MET B 154 CG SD CE REMARK 470 LYS B 156 CG CD CE NZ REMARK 470 ASP B 195 CG OD1 OD2 REMARK 470 THR B 196 OG1 CG2 REMARK 470 LYS B 223 CD CE NZ REMARK 470 GLN B 233 CG CD OE1 NE2 REMARK 470 GLU B 245 CG CD OE1 OE2 REMARK 470 ARG B 249 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 255 CZ NH1 NH2 REMARK 470 LYS B 289 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 192 NE2 GLN B 254 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 151 CA - CB - CG ANGL. DEV. = 17.5 DEGREES REMARK 500 ARG B 100 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG B 100 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 LEU B 151 CA - CB - CG ANGL. DEV. = 16.7 DEGREES REMARK 500 ASP B 161 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 MET B 214 CG - SD - CE ANGL. DEV. = 18.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 137 -120.25 50.65 REMARK 500 MET B 119 66.98 -103.78 REMARK 500 GLU B 137 -117.75 53.63 REMARK 500 ASP B 195 37.65 -85.48 REMARK 500 THR B 196 123.99 -21.55 REMARK 500 SER B 197 -5.74 117.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5G6S RELATED DB: PDB REMARK 900 IMINE REDUCTASE FROM ASPERGILLUS ORYZAE IN COMPLEX WITH NADP(H) AND REMARK 900 (R)-RASAGILINE DBREF 5G6R A 1 295 UNP Q2TW47 Q2TW47_ASPOR 1 295 DBREF 5G6R B 1 295 UNP Q2TW47 Q2TW47_ASPOR 1 295 SEQRES 1 A 295 MET SER LYS HIS ILE GLY ILE PHE GLY LEU GLY ALA MET SEQRES 2 A 295 GLY THR ALA LEU ALA ALA LYS TYR LEU GLU HIS GLY TYR SEQRES 3 A 295 LYS THR SER VAL TRP ASN ARG THR THR ALA LYS ALA ILE SEQRES 4 A 295 PRO LEU VAL GLU GLN GLY ALA LYS LEU ALA SER THR ILE SEQRES 5 A 295 SER GLU GLY VAL ASN ALA ASN ASP LEU ILE ILE ILE CYS SEQRES 6 A 295 LEU LEU ASN ASN GLN VAL VAL GLU ASP ALA LEU ARG ASP SEQRES 7 A 295 ALA LEU GLN THR LEU PRO SER LYS THR ILE VAL ASN LEU SEQRES 8 A 295 THR ASN GLY THR PRO ASN GLN ALA ARG LYS LEU ALA ASP SEQRES 9 A 295 PHE VAL THR SER HIS GLY ALA ARG TYR ILE HIS GLY GLY SEQRES 10 A 295 ILE MET ALA VAL PRO THR MET ILE GLY SER PRO HIS ALA SEQRES 11 A 295 VAL LEU LEU TYR SER GLY GLU SER LEU GLU LEU PHE GLN SEQRES 12 A 295 SER ILE GLU SER HIS LEU SER LEU LEU GLY MET SER LYS SEQRES 13 A 295 TYR LEU GLY THR ASP ALA GLY SER ALA SER LEU HIS ASP SEQRES 14 A 295 LEU ALA LEU LEU SER GLY MET TYR GLY LEU PHE SER GLY SEQRES 15 A 295 PHE LEU HIS ALA VAL ALA LEU ILE LYS SER GLY GLN ASP SEQRES 16 A 295 THR SER THR THR ALA THR GLY LEU LEU PRO LEU LEU THR SEQRES 17 A 295 PRO TRP LEU SER ALA MET THR GLY TYR LEU SER SER ILE SEQRES 18 A 295 ALA LYS GLN ILE ASP ASP GLY ASP TYR ALA THR GLN GLY SEQRES 19 A 295 SER ASN LEU GLY MET GLN LEU ALA GLY VAL GLU ASN ILE SEQRES 20 A 295 ILE ARG ALA GLY GLU GLU GLN ARG VAL SER SER GLN MET SEQRES 21 A 295 ILE LEU PRO ILE LYS ALA LEU ILE GLU GLN ALA VAL GLY SEQRES 22 A 295 GLU GLY HIS GLY GLY GLU ASP LEU SER ALA LEU ILE GLU SEQRES 23 A 295 TYR PHE LYS VAL GLY LYS ASN VAL ASP SEQRES 1 B 295 MET SER LYS HIS ILE GLY ILE PHE GLY LEU GLY ALA MET SEQRES 2 B 295 GLY THR ALA LEU ALA ALA LYS TYR LEU GLU HIS GLY TYR SEQRES 3 B 295 LYS THR SER VAL TRP ASN ARG THR THR ALA LYS ALA ILE SEQRES 4 B 295 PRO LEU VAL GLU GLN GLY ALA LYS LEU ALA SER THR ILE SEQRES 5 B 295 SER GLU GLY VAL ASN ALA ASN ASP LEU ILE ILE ILE CYS SEQRES 6 B 295 LEU LEU ASN ASN GLN VAL VAL GLU ASP ALA LEU ARG ASP SEQRES 7 B 295 ALA LEU GLN THR LEU PRO SER LYS THR ILE VAL ASN LEU SEQRES 8 B 295 THR ASN GLY THR PRO ASN GLN ALA ARG LYS LEU ALA ASP SEQRES 9 B 295 PHE VAL THR SER HIS GLY ALA ARG TYR ILE HIS GLY GLY SEQRES 10 B 295 ILE MET ALA VAL PRO THR MET ILE GLY SER PRO HIS ALA SEQRES 11 B 295 VAL LEU LEU TYR SER GLY GLU SER LEU GLU LEU PHE GLN SEQRES 12 B 295 SER ILE GLU SER HIS LEU SER LEU LEU GLY MET SER LYS SEQRES 13 B 295 TYR LEU GLY THR ASP ALA GLY SER ALA SER LEU HIS ASP SEQRES 14 B 295 LEU ALA LEU LEU SER GLY MET TYR GLY LEU PHE SER GLY SEQRES 15 B 295 PHE LEU HIS ALA VAL ALA LEU ILE LYS SER GLY GLN ASP SEQRES 16 B 295 THR SER THR THR ALA THR GLY LEU LEU PRO LEU LEU THR SEQRES 17 B 295 PRO TRP LEU SER ALA MET THR GLY TYR LEU SER SER ILE SEQRES 18 B 295 ALA LYS GLN ILE ASP ASP GLY ASP TYR ALA THR GLN GLY SEQRES 19 B 295 SER ASN LEU GLY MET GLN LEU ALA GLY VAL GLU ASN ILE SEQRES 20 B 295 ILE ARG ALA GLY GLU GLU GLN ARG VAL SER SER GLN MET SEQRES 21 B 295 ILE LEU PRO ILE LYS ALA LEU ILE GLU GLN ALA VAL GLY SEQRES 22 B 295 GLU GLY HIS GLY GLY GLU ASP LEU SER ALA LEU ILE GLU SEQRES 23 B 295 TYR PHE LYS VAL GLY LYS ASN VAL ASP HET NDP A1000 48 HET NDP B1001 48 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE FORMUL 3 NDP 2(C21 H30 N7 O17 P3) FORMUL 5 HOH *164(H2 O) HELIX 1 1 GLY A 11 HIS A 24 1 14 HELIX 2 2 THR A 34 LYS A 37 5 4 HELIX 3 3 ALA A 38 GLN A 44 1 7 HELIX 4 4 THR A 51 ALA A 58 1 8 HELIX 5 5 ASN A 68 ASP A 78 1 11 HELIX 6 6 ALA A 79 LEU A 83 5 5 HELIX 7 7 THR A 95 SER A 108 1 14 HELIX 8 8 VAL A 121 ILE A 125 5 5 HELIX 9 9 SER A 138 SER A 150 1 13 HELIX 10 10 LEU A 151 GLY A 153 5 3 HELIX 11 11 GLY A 163 SER A 192 1 30 HELIX 12 12 THR A 199 GLY A 228 1 30 HELIX 13 13 ASN A 236 ARG A 255 1 20 HELIX 14 14 ILE A 261 GLU A 274 1 14 HELIX 15 15 ASP A 280 PHE A 288 5 9 HELIX 16 16 GLY B 11 HIS B 24 1 14 HELIX 17 17 THR B 34 LYS B 37 5 4 HELIX 18 18 ALA B 38 GLN B 44 1 7 HELIX 19 19 THR B 51 ALA B 58 1 8 HELIX 20 20 ASN B 68 ASP B 78 1 11 HELIX 21 21 ALA B 79 LEU B 83 5 5 HELIX 22 22 THR B 95 SER B 108 1 14 HELIX 23 23 VAL B 121 ILE B 125 5 5 HELIX 24 24 SER B 138 SER B 150 1 13 HELIX 25 25 LEU B 151 GLY B 153 5 3 HELIX 26 26 GLY B 163 SER B 192 1 30 HELIX 27 27 THR B 199 GLY B 228 1 30 HELIX 28 28 ASN B 236 ARG B 255 1 20 HELIX 29 29 SER B 258 MET B 260 5 3 HELIX 30 30 ILE B 261 GLU B 274 1 14 HELIX 31 31 ASP B 280 PHE B 288 5 9 SHEET 1 AA 8 LYS A 47 LEU A 48 0 SHEET 2 AA 8 LYS A 27 TRP A 31 1 O THR A 28 N LYS A 47 SHEET 3 AA 8 HIS A 4 PHE A 8 1 O ILE A 5 N SER A 29 SHEET 4 AA 8 LEU A 61 ILE A 64 1 O LEU A 61 N GLY A 6 SHEET 5 AA 8 THR A 87 ASN A 90 1 O THR A 87 N ILE A 62 SHEET 6 AA 8 ARG A 112 MET A 119 1 O ARG A 112 N ILE A 88 SHEET 7 AA 8 VAL A 131 SER A 135 -1 O VAL A 131 N MET A 119 SHEET 8 AA 8 MET A 154 TYR A 157 1 O MET A 154 N LEU A 132 SHEET 1 BA 8 LYS B 47 LEU B 48 0 SHEET 2 BA 8 LYS B 27 TRP B 31 1 O THR B 28 N LYS B 47 SHEET 3 BA 8 HIS B 4 PHE B 8 1 O ILE B 5 N SER B 29 SHEET 4 BA 8 LEU B 61 ILE B 64 1 O LEU B 61 N GLY B 6 SHEET 5 BA 8 THR B 87 ASN B 90 1 O THR B 87 N ILE B 62 SHEET 6 BA 8 ARG B 112 MET B 119 1 O ARG B 112 N ILE B 88 SHEET 7 BA 8 VAL B 131 SER B 135 -1 O VAL B 131 N MET B 119 SHEET 8 BA 8 MET B 154 TYR B 157 1 O MET B 154 N LEU B 132 SITE 1 AC1 24 GLY A 9 LEU A 10 GLY A 11 ALA A 12 SITE 2 AC1 24 MET A 13 ASN A 32 ARG A 33 THR A 34 SITE 3 AC1 24 LYS A 37 CYS A 65 LEU A 66 LEU A 67 SITE 4 AC1 24 VAL A 71 THR A 92 ASN A 93 ILE A 118 SITE 5 AC1 24 ALA A 120 PRO A 122 HOH A2004 HOH A2005 SITE 6 AC1 24 HOH A2012 HOH A2111 HOH A2112 MET B 239 SITE 1 AC2 18 LEU B 10 GLY B 11 ALA B 12 MET B 13 SITE 2 AC2 18 ASN B 32 ARG B 33 THR B 34 LYS B 37 SITE 3 AC2 18 CYS B 65 LEU B 66 LEU B 67 VAL B 71 SITE 4 AC2 18 ASN B 93 ILE B 118 ALA B 120 PRO B 122 SITE 5 AC2 18 HOH B2003 HOH B2007 CRYST1 39.270 92.440 84.510 90.00 100.33 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025465 0.000000 0.004642 0.00000 SCALE2 0.000000 0.010818 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012028 0.00000 MTRIX1 1 0.732500 -0.599200 0.323200 13.14000 1 MTRIX2 1 -0.597900 -0.739200 -0.115300 21.58000 1 MTRIX3 1 0.325400 -0.108800 -0.939300 -30.93000 1