HEADER TRANSFERASE 18-JUL-16 5GMY TITLE CRYSTAL STRUCTURE OF THE ARCHAEOGLOBUS FULGIDUS TITLE 2 OLIGOSACCHARYLTRANSFERASE (O29867_ARCFU) TETHERED WITH AN ACCEPTOR TITLE 3 PEPTIDE CONTAINING THE NVT SEQUON VIA A DISULFIDE BOND COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSMEMBRANE OLIGOSACCHARYL TRANSFERASE, PUTATIVE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: OLIGOSACCHARYLTRANSFERASE; COMPND 5 EC: 2.4.99.18; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: ACCEPTOR PEPTIDE, ARG-TYR-ASN-VAL-THR-ALA-CYS; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS DSM 4304; SOURCE 3 ORGANISM_TAXID: 224325; SOURCE 4 STRAIN: DSM 4304; SOURCE 5 GENE: AF_0380; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630 KEYWDS OLIGOSACCHARYLTRANSFERASE, N-LINEKED GLYCOSYLATION, AGLB, KEYWDS 2 ARCHAEOGLOBUS FULGIDUS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.MATSUMOTO,D.KOHDA REVDAT 5 08-NOV-23 5GMY 1 REMARK REVDAT 4 31-MAR-21 5GMY 1 SOURCE AUTHOR JRNL REMARK REVDAT 4 2 1 DBREF HELIX SHEET SSBOND REVDAT 4 3 1 LINK SITE CRYST1 ATOM REVDAT 3 26-FEB-20 5GMY 1 REMARK REVDAT 2 15-FEB-17 5GMY 1 JRNL REVDAT 1 01-FEB-17 5GMY 0 JRNL AUTH S.MATSUMOTO,Y.TAGUCHI,A.SHIMADA,M.IGURA,D.KOHDA JRNL TITL TETHERING AN N-GLYCOSYLATION SEQUON-CONTAINING PEPTIDE JRNL TITL 2 CREATES A CATALYTICALLY COMPETENT OLIGOSACCHARYLTRANSFERASE JRNL TITL 3 COMPLEX JRNL REF BIOCHEMISTRY V. 56 602 2017 JRNL REFN ISSN 1520-4995 JRNL PMID 27997792 JRNL DOI 10.1021/ACS.BIOCHEM.6B01089 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.10 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 17453 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 886 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1000 - 6.3600 0.96 2886 122 0.1851 0.2187 REMARK 3 2 6.3600 - 5.0500 1.00 2824 134 0.2575 0.3133 REMARK 3 3 5.0500 - 4.4100 1.00 2788 148 0.2251 0.2662 REMARK 3 4 4.4100 - 4.0100 1.00 2735 157 0.2425 0.3018 REMARK 3 5 4.0100 - 3.7200 0.99 2718 156 0.2923 0.3230 REMARK 3 6 3.7200 - 3.5000 0.97 2616 169 0.3713 0.4419 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.557 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.381 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 147.0 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 202.4 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 7111 REMARK 3 ANGLE : 0.561 9702 REMARK 3 CHIRALITY : 0.042 1046 REMARK 3 PLANARITY : 0.004 1209 REMARK 3 DIHEDRAL : 9.337 948 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 533 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.3276 -51.5814 20.5002 REMARK 3 T TENSOR REMARK 3 T11: 1.6808 T22: 1.7853 REMARK 3 T33: 1.5226 T12: -0.3175 REMARK 3 T13: 0.0835 T23: -0.0718 REMARK 3 L TENSOR REMARK 3 L11: 0.9643 L22: 1.3825 REMARK 3 L33: 2.0949 L12: -0.3828 REMARK 3 L13: -0.3754 L23: -1.4218 REMARK 3 S TENSOR REMARK 3 S11: -0.1715 S12: 0.3778 S13: 0.0634 REMARK 3 S21: -0.4521 S22: -0.0030 S23: -0.0307 REMARK 3 S31: 0.5068 S32: -0.4004 S33: 0.2323 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 534 THROUGH 868 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.7579 -10.6990 3.9931 REMARK 3 T TENSOR REMARK 3 T11: 1.7115 T22: 2.2113 REMARK 3 T33: 2.1563 T12: -0.0253 REMARK 3 T13: -0.1780 T23: 0.3685 REMARK 3 L TENSOR REMARK 3 L11: 1.8932 L22: 1.2760 REMARK 3 L33: 2.5678 L12: 0.5669 REMARK 3 L13: 0.1102 L23: -0.5557 REMARK 3 S TENSOR REMARK 3 S11: -0.1751 S12: 0.7338 S13: 0.6512 REMARK 3 S21: -0.0832 S22: -0.0443 S23: -0.3544 REMARK 3 S31: -0.2491 S32: 0.4422 S33: 0.3286 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 7 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.2929 -30.5152 16.1795 REMARK 3 T TENSOR REMARK 3 T11: 2.0270 T22: 1.6158 REMARK 3 T33: 2.6389 T12: -0.6316 REMARK 3 T13: -0.3454 T23: 0.4342 REMARK 3 L TENSOR REMARK 3 L11: 1.5425 L22: 0.0637 REMARK 3 L33: 6.7482 L12: -0.3031 REMARK 3 L13: 3.2175 L23: -0.6525 REMARK 3 S TENSOR REMARK 3 S11: -0.0222 S12: -0.3155 S13: -0.4922 REMARK 3 S21: 0.9985 S22: -0.1834 S23: 0.6605 REMARK 3 S31: 0.3742 S32: -0.3256 S33: 0.2663 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5GMY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1300001096. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17649 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 49.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.90 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 44.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.20 REMARK 200 R MERGE FOR SHELL (I) : 1.28300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3WAK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 MM MGCL2, 0.1 M BIS-TRIS, PH 6.5, REMARK 280 22 % (W/V) PEG 550MME, 5% (V/V) JEFFAMINE M-600, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.67200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 60.77450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 60.77450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 136.00800 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 60.77450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 60.77450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 45.33600 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 60.77450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.77450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 136.00800 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 60.77450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.77450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 45.33600 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 90.67200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 ASN A 3 REMARK 465 ALA A 4 REMARK 465 SER A 335 REMARK 465 PRO A 336 REMARK 465 ASP A 337 REMARK 465 PHE A 338 REMARK 465 ALA A 339 REMARK 465 ARG A 340 REMARK 465 ASN A 341 REMARK 465 LEU A 342 REMARK 465 LEU A 343 REMARK 465 SER A 344 REMARK 465 VAL A 345 REMARK 465 VAL A 346 REMARK 465 ARG A 347 REMARK 465 VAL A 348 REMARK 465 VAL A 349 REMARK 465 GLN A 350 REMARK 465 GLU A 869 REMARK 465 LEU A 870 REMARK 465 ALA A 871 REMARK 465 LEU A 872 REMARK 465 VAL A 873 REMARK 465 PRO A 874 REMARK 465 ARG A 875 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 8 33.99 -88.89 REMARK 500 THR A 38 -130.60 -117.65 REMARK 500 ASN A 61 45.67 -108.47 REMARK 500 PRO A 63 48.43 -98.99 REMARK 500 TYR A 76 -63.78 -106.92 REMARK 500 PHE A 132 -142.14 -122.65 REMARK 500 PRO A 148 -153.47 -86.65 REMARK 500 PHE A 159 58.81 -150.01 REMARK 500 ASP A 188 -2.59 -142.46 REMARK 500 SER A 190 -17.82 69.14 REMARK 500 LEU A 193 -76.85 -112.15 REMARK 500 THR A 194 14.79 56.89 REMARK 500 ALA A 195 16.85 58.09 REMARK 500 ARG A 196 -54.98 -127.70 REMARK 500 LEU A 235 42.65 -103.71 REMARK 500 TYR A 362 152.30 174.05 REMARK 500 PHE A 427 38.18 -84.47 REMARK 500 ALA A 496 -65.62 -91.13 REMARK 500 PRO A 569 6.23 -67.04 REMARK 500 LYS A 606 -37.07 -137.45 REMARK 500 THR A 616 -91.58 -117.80 REMARK 500 ASP A 629 151.49 176.34 REMARK 500 SER A 654 -161.98 -115.38 REMARK 500 LEU A 682 -68.06 -95.84 REMARK 500 SER A 718 -0.80 65.65 REMARK 500 LYS A 758 -67.81 -109.03 REMARK 500 PRO A 762 97.25 -62.93 REMARK 500 SER A 787 7.16 -68.02 REMARK 500 THR A 821 114.83 -160.04 REMARK 500 LEU A 866 114.81 -162.95 REMARK 500 ASN B 3 9.25 55.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 901 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 47 OD2 REMARK 620 2 ASP A 161 OD2 73.7 REMARK 620 N 1 DBREF 5GMY A 1 868 UNP O29867 O29867_ARCFU 1 868 DBREF 5GMY B 1 7 PDB 5GMY 5GMY 1 7 SEQADV 5GMY CYS A 617 UNP O29867 GLY 617 ENGINEERED MUTATION SEQADV 5GMY GLU A 869 UNP O29867 EXPRESSION TAG SEQADV 5GMY LEU A 870 UNP O29867 EXPRESSION TAG SEQADV 5GMY ALA A 871 UNP O29867 EXPRESSION TAG SEQADV 5GMY LEU A 872 UNP O29867 EXPRESSION TAG SEQADV 5GMY VAL A 873 UNP O29867 EXPRESSION TAG SEQADV 5GMY PRO A 874 UNP O29867 EXPRESSION TAG SEQADV 5GMY ARG A 875 UNP O29867 EXPRESSION TAG SEQRES 1 A 875 MET GLN ASN ALA GLU SER TRP PHE LYS LYS TYR TRP HIS SEQRES 2 A 875 LEU SER VAL LEU VAL ILE ALA ALA LEU ILE SER VAL LYS SEQRES 3 A 875 LEU ARG ILE LEU ASN PRO TRP ASN SER VAL PHE THR TRP SEQRES 4 A 875 THR VAL ARG LEU GLY GLY ASN ASP PRO TRP TYR TYR TYR SEQRES 5 A 875 ARG LEU ILE GLU ASN THR ILE HIS ASN PHE PRO HIS ARG SEQRES 6 A 875 ILE TRP PHE ASP PRO PHE THR TYR TYR PRO TYR GLY SER SEQRES 7 A 875 TYR THR HIS PHE GLY PRO PHE LEU VAL TYR LEU GLY SER SEQRES 8 A 875 ILE ALA GLY ILE ILE PHE SER ALA THR SER GLY GLU SER SEQRES 9 A 875 LEU ARG ALA VAL LEU ALA PHE ILE PRO ALA ILE GLY GLY SEQRES 10 A 875 VAL LEU ALA ILE LEU PRO VAL TYR LEU LEU THR ARG GLU SEQRES 11 A 875 VAL PHE ASP LYS ARG ALA ALA VAL ILE ALA ALA PHE LEU SEQRES 12 A 875 ILE ALA ILE VAL PRO GLY GLN PHE LEU GLN ARG SER ILE SEQRES 13 A 875 LEU GLY PHE ASN ASP HIS HIS ILE TRP GLU ALA PHE TRP SEQRES 14 A 875 GLN VAL SER ALA LEU GLY THR PHE LEU LEU ALA TYR ASN SEQRES 15 A 875 ARG TRP LYS GLY HIS ASP LEU SER HIS ASN LEU THR ALA SEQRES 16 A 875 ARG GLN MET ALA TYR PRO VAL ILE ALA GLY ILE THR ILE SEQRES 17 A 875 GLY LEU TYR VAL LEU SER TRP GLY ALA GLY PHE ILE ILE SEQRES 18 A 875 ALA PRO ILE ILE LEU ALA PHE MET PHE PHE ALA PHE VAL SEQRES 19 A 875 LEU ALA GLY PHE VAL ASN ALA ASP ARG LYS ASN LEU SER SEQRES 20 A 875 LEU VAL ALA VAL VAL THR PHE ALA VAL SER ALA LEU ILE SEQRES 21 A 875 TYR LEU PRO PHE ALA PHE ASN TYR PRO GLY PHE SER THR SEQRES 22 A 875 ILE PHE TYR SER PRO PHE GLN LEU LEU VAL LEU LEU GLY SEQRES 23 A 875 SER ALA VAL ILE ALA ALA ALA PHE TYR GLN ILE GLU LYS SEQRES 24 A 875 TRP ASN ASP VAL GLY PHE PHE GLU ARG VAL GLY LEU GLY SEQRES 25 A 875 ARG LYS GLY MET PRO LEU ALA VAL ILE VAL LEU THR ALA SEQRES 26 A 875 LEU ILE MET GLY LEU PHE PHE VAL ILE SER PRO ASP PHE SEQRES 27 A 875 ALA ARG ASN LEU LEU SER VAL VAL ARG VAL VAL GLN PRO SEQRES 28 A 875 LYS GLY GLY ALA LEU THR ILE ALA GLU VAL TYR PRO PHE SEQRES 29 A 875 PHE PHE THR HIS ASN GLY GLU PHE THR LEU THR ASN ALA SEQRES 30 A 875 VAL LEU HIS PHE GLY ALA LEU PHE PHE PHE GLY MET ALA SEQRES 31 A 875 GLY ILE LEU TYR SER ALA TYR ARG PHE LEU LYS ARG ARG SEQRES 32 A 875 SER PHE PRO GLU MET ALA LEU LEU ILE TRP ALA ILE ALA SEQRES 33 A 875 MET PHE ILE ALA LEU TRP GLY GLN ASN ARG PHE ALA TYR SEQRES 34 A 875 TYR PHE ALA ALA VAL SER ALA VAL TYR SER ALA LEU ALA SEQRES 35 A 875 LEU SER VAL VAL PHE ASP LYS LEU HIS LEU TYR ARG ALA SEQRES 36 A 875 LEU GLU ASN ALA ILE GLY ALA ARG ASN LYS LEU SER TYR SEQRES 37 A 875 PHE ARG VAL ALA PHE ALA LEU LEU ILE ALA LEU ALA ALA SEQRES 38 A 875 ILE TYR PRO THR TYR ILE LEU ALA ASP ALA GLN SER SER SEQRES 39 A 875 TYR ALA GLY GLY PRO ASN LYS GLN TRP TYR ASP ALA LEU SEQRES 40 A 875 THR TRP MET ARG GLU ASN THR PRO ASP GLY GLU LYS TYR SEQRES 41 A 875 ASP GLU TYR TYR LEU GLN LEU TYR PRO THR PRO GLN SER SEQRES 42 A 875 ASN LYS GLU PRO PHE SER TYR PRO PHE GLU THR TYR GLY SEQRES 43 A 875 VAL ILE SER TRP TRP ASP TYR GLY HIS TRP ILE GLU ALA SEQRES 44 A 875 VAL ALA HIS ARG MET PRO ILE ALA ASN PRO PHE GLN ALA SEQRES 45 A 875 GLY ILE GLY ASN LYS TYR ASN ASN VAL PRO GLY ALA SER SEQRES 46 A 875 SER PHE PHE THR ALA GLU ASN GLU SER TYR ALA GLU PHE SEQRES 47 A 875 VAL ALA GLU LYS LEU ASN VAL LYS TYR VAL VAL SER ASP SEQRES 48 A 875 ILE GLU MET GLU THR CYS LYS TYR TYR ALA MET ALA VAL SEQRES 49 A 875 TRP ALA GLU GLY ASP LEU PRO LEU ALA GLU LYS TYR TYR SEQRES 50 A 875 GLY GLY TYR PHE TYR TYR SER PRO THR GLY THR PHE GLY SEQRES 51 A 875 TYR ALA ASN SER GLN TRP ASP ILE PRO LEU ASN SER ILE SEQRES 52 A 875 ILE ILE PRO LEU ARG ILE PRO SER GLU LEU TYR TYR SER SEQRES 53 A 875 THR MET GLU ALA LYS LEU HIS LEU PHE ASP GLY SER GLY SEQRES 54 A 875 LEU SER HIS TYR ARG MET ILE TYR GLU SER ASP TYR PRO SEQRES 55 A 875 ALA GLU TRP LYS SER TYR SER SER GLN VAL ASN LEU ASN SEQRES 56 A 875 ASN GLU SER GLN VAL LEU GLN THR ALA LEU TYR GLU ALA SEQRES 57 A 875 VAL MET ARG ALA ARG TYR GLY VAL SER PRO THR MET GLY SEQRES 58 A 875 THR GLN GLU VAL LEU TYR LYS TYR ALA TYR THR GLN LEU SEQRES 59 A 875 TYR GLU LYS LYS MET GLY ILE PRO VAL LYS ILE ALA PRO SEQRES 60 A 875 SER GLY TYR VAL LYS ILE PHE GLU ARG VAL LYS GLY ALA SEQRES 61 A 875 VAL VAL THR GLY LYS VAL SER ALA ASN VAL THR GLU VAL SEQRES 62 A 875 SER VAL ASN ALA THR ILE LYS THR ASN GLN ASN ARG THR SEQRES 63 A 875 PHE GLU TYR TRP GLN THR VAL GLU VAL LYS ASN GLY THR SEQRES 64 A 875 TYR THR VAL VAL LEU PRO TYR SER HIS ASN SER ASP TYR SEQRES 65 A 875 PRO VAL LYS PRO ILE THR PRO TYR HIS ILE LYS ALA GLY SEQRES 66 A 875 ASN VAL VAL LYS GLU ILE THR ILE TYR GLU SER GLN VAL SEQRES 67 A 875 GLN ASN GLY GLU ILE ILE GLN LEU ASP LEU GLU LEU ALA SEQRES 68 A 875 LEU VAL PRO ARG SEQRES 1 B 7 ARG TYR ASN VAL THR ALA CYS HET MG A 901 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG MG 2+ HELIX 1 AA1 LYS A 10 ILE A 29 1 20 HELIX 2 AA2 PRO A 32 PHE A 37 1 6 HELIX 3 AA3 ASN A 46 ASN A 61 1 16 HELIX 4 AA4 GLY A 83 PHE A 97 1 15 HELIX 5 AA5 SER A 101 ALA A 120 1 20 HELIX 6 AA6 ALA A 120 PHE A 132 1 13 HELIX 7 AA7 ASP A 133 ILE A 144 1 12 HELIX 8 AA8 GLY A 149 ARG A 154 1 6 HELIX 9 AA9 HIS A 162 ARG A 183 1 22 HELIX 10 AB1 MET A 198 LEU A 213 1 16 HELIX 11 AB2 TRP A 215 PHE A 219 5 5 HELIX 12 AB3 ILE A 220 LEU A 235 1 16 HELIX 13 AB4 ASP A 242 LEU A 262 1 21 HELIX 14 AB5 PRO A 263 ALA A 265 5 3 HELIX 15 AB6 SER A 277 VAL A 303 1 27 HELIX 16 AB7 GLY A 312 LYS A 314 5 3 HELIX 17 AB8 GLY A 315 ILE A 327 1 13 HELIX 18 AB9 LYS A 352 THR A 357 5 6 HELIX 19 AC1 LEU A 374 GLY A 382 1 9 HELIX 20 AC2 ALA A 383 ARG A 403 1 21 HELIX 21 AC3 SER A 404 GLN A 424 1 21 HELIX 22 AC4 PHE A 427 LEU A 450 1 24 HELIX 23 AC5 HIS A 451 ALA A 459 1 9 HELIX 24 AC6 SER A 467 SER A 493 1 27 HELIX 25 AC7 ASN A 500 THR A 514 1 15 HELIX 26 AC8 ASP A 516 TYR A 524 1 9 HELIX 27 AC9 TRP A 550 ASP A 552 5 3 HELIX 28 AD1 TYR A 553 VAL A 560 1 8 HELIX 29 AD2 GLY A 583 THR A 589 1 7 HELIX 30 AD3 ASN A 592 LEU A 603 1 12 HELIX 31 AD4 ILE A 612 THR A 616 1 5 HELIX 32 AD5 LYS A 618 GLY A 628 1 11 HELIX 33 AD6 LEU A 630 TYR A 637 5 8 HELIX 34 AD7 LEU A 673 SER A 676 5 4 HELIX 35 AD8 THR A 677 LEU A 684 1 8 HELIX 36 AD9 PRO A 702 SER A 707 1 6 HELIX 37 AE1 TYR A 708 GLN A 711 5 4 HELIX 38 AE2 GLN A 719 ARG A 733 1 15 HELIX 39 AE3 THR A 739 TYR A 755 1 17 HELIX 40 AE4 TYR A 854 ASN A 860 1 7 SHEET 1 AA1 2 PHE A 68 ASP A 69 0 SHEET 2 AA1 2 SER A 78 TYR A 79 -1 O SER A 78 N ASP A 69 SHEET 1 AA2 4 GLY A 546 ILE A 548 0 SHEET 2 AA2 4 VAL A 605 ASP A 611 1 O LYS A 606 N GLY A 546 SHEET 3 AA2 4 VAL A 771 ARG A 776 -1 O ARG A 776 N LYS A 606 SHEET 4 AA2 4 TYR A 693 GLU A 698 -1 N TYR A 697 O ILE A 773 SHEET 1 AA3 3 PHE A 649 ALA A 652 0 SHEET 2 AA3 3 TYR A 640 TYR A 643 -1 N TYR A 640 O ALA A 652 SHEET 3 AA3 3 ILE A 663 ILE A 664 -1 O ILE A 663 N TYR A 643 SHEET 1 AA4 3 THR A 819 LEU A 824 0 SHEET 2 AA4 3 ALA A 780 LYS A 785 -1 N VAL A 782 O VAL A 822 SHEET 3 AA4 3 ILE A 863 GLN A 865 1 O ILE A 864 N THR A 783 SHEET 1 AA5 3 THR A 806 GLU A 814 0 SHEET 2 AA5 3 GLU A 792 LYS A 800 -1 N ILE A 799 O PHE A 807 SHEET 3 AA5 3 LYS A 835 PRO A 836 -1 O LYS A 835 N LYS A 800 SHEET 1 AA6 4 THR A 806 GLU A 814 0 SHEET 2 AA6 4 GLU A 792 LYS A 800 -1 N ILE A 799 O PHE A 807 SHEET 3 AA6 4 TYR A 840 ALA A 844 -1 O HIS A 841 N ASN A 796 SHEET 4 AA6 4 VAL A 847 ILE A 851 -1 O ILE A 851 N TYR A 840 LINK OD2 ASP A 47 MG MG A 901 1555 1555 2.00 LINK OD2 ASP A 161 MG MG A 901 1555 1555 2.82 CISPEP 1 PHE A 62 PRO A 63 0 10.68 CRYST1 121.549 121.549 181.344 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008227 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008227 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005514 0.00000