data_5GNV # _entry.id 5GNV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5GNV pdb_00005gnv 10.2210/pdb5gnv/pdb WWPDB D_1300001160 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-08-02 2 'Structure model' 1 1 2017-11-01 3 'Structure model' 1 2 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_struct_special_symmetry # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 2 'Structure model' '_citation_author.name' 14 3 'Structure model' '_database_2.pdbx_DOI' 15 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5GNV _pdbx_database_status.recvd_initial_deposition_date 2016-07-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category FoldIt _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shang, Y.' 1 'Xia, Y.' 2 'Zhu, R.' 3 'Zhu, J.' 4 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Biochem. J.' _citation.journal_id_ASTM BIJOAK _citation.journal_id_CSD 0043 _citation.journal_id_ISSN 1470-8728 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 474 _citation.language ? _citation.page_first 2817 _citation.page_last 2828 _citation.title 'Structure of the PSD-95/MAP1A complex reveals a unique target recognition mode of the MAGUK GK domain' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1042/BCJ20170356 _citation.pdbx_database_id_PubMed 28701415 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xia, Y.' 1 ? primary 'Shang, Y.' 2 ? primary 'Zhang, R.' 3 ? primary 'Zhu, J.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Disks large homolog 4' 21690.418 1 ? ? 'UNP residues 531-713' ? 2 polymer syn 'Microtubule-associated protein 1A' 2798.969 1 ? ? 'UNP residues 1866-1891' ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 36 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Postsynaptic density protein 95,PSD-95,Synapse-associated protein 90,SAP90' 2 MAP-1A # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPGSEFVHYARPIIILGPTKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIQAHKFIEAGQY NSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPIAIFIRPRSLENVLEINKRITEEQARKAFDRATKLEQEF TECFSAIVEGDSFEEIYHKVKRVIEDLSG ; ;GPGSEFVHYARPIIILGPTKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIQAHKFIEAGQY NSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPIAIFIRPRSLENVLEINKRITEEQARKAFDRATKLEQEF TECFSAIVEGDSFEEIYHKVKRVIEDLSG ; A ? 2 'polypeptide(L)' no no AELEGGPYSPLGKDYRKAEGEREGEG AELEGGPYSPLGKDYRKAEGEREGEG B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLY n 1 4 SER n 1 5 GLU n 1 6 PHE n 1 7 VAL n 1 8 HIS n 1 9 TYR n 1 10 ALA n 1 11 ARG n 1 12 PRO n 1 13 ILE n 1 14 ILE n 1 15 ILE n 1 16 LEU n 1 17 GLY n 1 18 PRO n 1 19 THR n 1 20 LYS n 1 21 ASP n 1 22 ARG n 1 23 ALA n 1 24 ASN n 1 25 ASP n 1 26 ASP n 1 27 LEU n 1 28 LEU n 1 29 SER n 1 30 GLU n 1 31 PHE n 1 32 PRO n 1 33 ASP n 1 34 LYS n 1 35 PHE n 1 36 GLY n 1 37 SER n 1 38 CYS n 1 39 VAL n 1 40 PRO n 1 41 HIS n 1 42 THR n 1 43 THR n 1 44 ARG n 1 45 PRO n 1 46 LYS n 1 47 ARG n 1 48 GLU n 1 49 TYR n 1 50 GLU n 1 51 ILE n 1 52 ASP n 1 53 GLY n 1 54 ARG n 1 55 ASP n 1 56 TYR n 1 57 HIS n 1 58 PHE n 1 59 VAL n 1 60 SER n 1 61 SER n 1 62 ARG n 1 63 GLU n 1 64 LYS n 1 65 MET n 1 66 GLU n 1 67 LYS n 1 68 ASP n 1 69 ILE n 1 70 GLN n 1 71 ALA n 1 72 HIS n 1 73 LYS n 1 74 PHE n 1 75 ILE n 1 76 GLU n 1 77 ALA n 1 78 GLY n 1 79 GLN n 1 80 TYR n 1 81 ASN n 1 82 SER n 1 83 HIS n 1 84 LEU n 1 85 TYR n 1 86 GLY n 1 87 THR n 1 88 SER n 1 89 VAL n 1 90 GLN n 1 91 SER n 1 92 VAL n 1 93 ARG n 1 94 GLU n 1 95 VAL n 1 96 ALA n 1 97 GLU n 1 98 GLN n 1 99 GLY n 1 100 LYS n 1 101 HIS n 1 102 CYS n 1 103 ILE n 1 104 LEU n 1 105 ASP n 1 106 VAL n 1 107 SER n 1 108 ALA n 1 109 ASN n 1 110 ALA n 1 111 VAL n 1 112 ARG n 1 113 ARG n 1 114 LEU n 1 115 GLN n 1 116 ALA n 1 117 ALA n 1 118 HIS n 1 119 LEU n 1 120 HIS n 1 121 PRO n 1 122 ILE n 1 123 ALA n 1 124 ILE n 1 125 PHE n 1 126 ILE n 1 127 ARG n 1 128 PRO n 1 129 ARG n 1 130 SER n 1 131 LEU n 1 132 GLU n 1 133 ASN n 1 134 VAL n 1 135 LEU n 1 136 GLU n 1 137 ILE n 1 138 ASN n 1 139 LYS n 1 140 ARG n 1 141 ILE n 1 142 THR n 1 143 GLU n 1 144 GLU n 1 145 GLN n 1 146 ALA n 1 147 ARG n 1 148 LYS n 1 149 ALA n 1 150 PHE n 1 151 ASP n 1 152 ARG n 1 153 ALA n 1 154 THR n 1 155 LYS n 1 156 LEU n 1 157 GLU n 1 158 GLN n 1 159 GLU n 1 160 PHE n 1 161 THR n 1 162 GLU n 1 163 CYS n 1 164 PHE n 1 165 SER n 1 166 ALA n 1 167 ILE n 1 168 VAL n 1 169 GLU n 1 170 GLY n 1 171 ASP n 1 172 SER n 1 173 PHE n 1 174 GLU n 1 175 GLU n 1 176 ILE n 1 177 TYR n 1 178 HIS n 1 179 LYS n 1 180 VAL n 1 181 LYS n 1 182 ARG n 1 183 VAL n 1 184 ILE n 1 185 GLU n 1 186 ASP n 1 187 LEU n 1 188 SER n 1 189 GLY n 2 1 ALA n 2 2 GLU n 2 3 LEU n 2 4 GLU n 2 5 GLY n 2 6 GLY n 2 7 PRO n 2 8 TYR n 2 9 SER n 2 10 PRO n 2 11 LEU n 2 12 GLY n 2 13 LYS n 2 14 ASP n 2 15 TYR n 2 16 ARG n 2 17 LYS n 2 18 ALA n 2 19 GLU n 2 20 GLY n 2 21 GLU n 2 22 ARG n 2 23 GLU n 2 24 GLY n 2 25 GLU n 2 26 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 189 _entity_src_gen.gene_src_common_name Rat _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Dlg4, Dlgh4, Psd95' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 26 _pdbx_entity_src_syn.organism_scientific 'Mus musculus' _pdbx_entity_src_syn.organism_common_name Mouse _pdbx_entity_src_syn.ncbi_taxonomy_id 10090 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 525 ? ? ? A . n A 1 2 PRO 2 526 ? ? ? A . n A 1 3 GLY 3 527 ? ? ? A . n A 1 4 SER 4 528 ? ? ? A . n A 1 5 GLU 5 529 ? ? ? A . n A 1 6 PHE 6 530 ? ? ? A . n A 1 7 VAL 7 531 ? ? ? A . n A 1 8 HIS 8 532 ? ? ? A . n A 1 9 TYR 9 533 533 TYR TYR A . n A 1 10 ALA 10 534 534 ALA ALA A . n A 1 11 ARG 11 535 535 ARG ARG A . n A 1 12 PRO 12 536 536 PRO PRO A . n A 1 13 ILE 13 537 537 ILE ILE A . n A 1 14 ILE 14 538 538 ILE ILE A . n A 1 15 ILE 15 539 539 ILE ILE A . n A 1 16 LEU 16 540 540 LEU LEU A . n A 1 17 GLY 17 541 541 GLY GLY A . n A 1 18 PRO 18 542 542 PRO PRO A . n A 1 19 THR 19 543 543 THR THR A . n A 1 20 LYS 20 544 544 LYS LYS A . n A 1 21 ASP 21 545 545 ASP ASP A . n A 1 22 ARG 22 546 546 ARG ARG A . n A 1 23 ALA 23 547 547 ALA ALA A . n A 1 24 ASN 24 548 548 ASN ASN A . n A 1 25 ASP 25 549 549 ASP ASP A . n A 1 26 ASP 26 550 550 ASP ASP A . n A 1 27 LEU 27 551 551 LEU LEU A . n A 1 28 LEU 28 552 552 LEU LEU A . n A 1 29 SER 29 553 553 SER SER A . n A 1 30 GLU 30 554 554 GLU GLU A . n A 1 31 PHE 31 555 555 PHE PHE A . n A 1 32 PRO 32 556 556 PRO PRO A . n A 1 33 ASP 33 557 557 ASP ASP A . n A 1 34 LYS 34 558 558 LYS LYS A . n A 1 35 PHE 35 559 559 PHE PHE A . n A 1 36 GLY 36 560 560 GLY GLY A . n A 1 37 SER 37 561 561 SER SER A . n A 1 38 CYS 38 562 562 CYS CYS A . n A 1 39 VAL 39 563 563 VAL VAL A . n A 1 40 PRO 40 564 564 PRO PRO A . n A 1 41 HIS 41 565 565 HIS HIS A . n A 1 42 THR 42 566 566 THR THR A . n A 1 43 THR 43 567 567 THR THR A . n A 1 44 ARG 44 568 568 ARG ARG A . n A 1 45 PRO 45 569 569 PRO PRO A . n A 1 46 LYS 46 570 570 LYS LYS A . n A 1 47 ARG 47 571 571 ARG ARG A . n A 1 48 GLU 48 572 572 GLU GLU A . n A 1 49 TYR 49 573 573 TYR TYR A . n A 1 50 GLU 50 574 574 GLU GLU A . n A 1 51 ILE 51 575 575 ILE ILE A . n A 1 52 ASP 52 576 576 ASP ASP A . n A 1 53 GLY 53 577 577 GLY GLY A . n A 1 54 ARG 54 578 578 ARG ARG A . n A 1 55 ASP 55 579 579 ASP ASP A . n A 1 56 TYR 56 580 580 TYR TYR A . n A 1 57 HIS 57 581 581 HIS HIS A . n A 1 58 PHE 58 582 582 PHE PHE A . n A 1 59 VAL 59 583 583 VAL VAL A . n A 1 60 SER 60 584 584 SER SER A . n A 1 61 SER 61 585 585 SER SER A . n A 1 62 ARG 62 586 586 ARG ARG A . n A 1 63 GLU 63 587 587 GLU GLU A . n A 1 64 LYS 64 588 588 LYS LYS A . n A 1 65 MET 65 589 589 MET MET A . n A 1 66 GLU 66 590 590 GLU GLU A . n A 1 67 LYS 67 591 591 LYS LYS A . n A 1 68 ASP 68 592 592 ASP ASP A . n A 1 69 ILE 69 593 593 ILE ILE A . n A 1 70 GLN 70 594 594 GLN GLN A . n A 1 71 ALA 71 595 595 ALA ALA A . n A 1 72 HIS 72 596 596 HIS HIS A . n A 1 73 LYS 73 597 597 LYS LYS A . n A 1 74 PHE 74 598 598 PHE PHE A . n A 1 75 ILE 75 599 599 ILE ILE A . n A 1 76 GLU 76 600 600 GLU GLU A . n A 1 77 ALA 77 601 601 ALA ALA A . n A 1 78 GLY 78 602 602 GLY GLY A . n A 1 79 GLN 79 603 603 GLN GLN A . n A 1 80 TYR 80 604 604 TYR TYR A . n A 1 81 ASN 81 605 605 ASN ASN A . n A 1 82 SER 82 606 606 SER SER A . n A 1 83 HIS 83 607 607 HIS HIS A . n A 1 84 LEU 84 608 608 LEU LEU A . n A 1 85 TYR 85 609 609 TYR TYR A . n A 1 86 GLY 86 610 610 GLY GLY A . n A 1 87 THR 87 611 611 THR THR A . n A 1 88 SER 88 612 612 SER SER A . n A 1 89 VAL 89 613 613 VAL VAL A . n A 1 90 GLN 90 614 614 GLN GLN A . n A 1 91 SER 91 615 615 SER SER A . n A 1 92 VAL 92 616 616 VAL VAL A . n A 1 93 ARG 93 617 617 ARG ARG A . n A 1 94 GLU 94 618 618 GLU GLU A . n A 1 95 VAL 95 619 619 VAL VAL A . n A 1 96 ALA 96 620 620 ALA ALA A . n A 1 97 GLU 97 621 621 GLU GLU A . n A 1 98 GLN 98 622 622 GLN GLN A . n A 1 99 GLY 99 623 623 GLY GLY A . n A 1 100 LYS 100 624 624 LYS LYS A . n A 1 101 HIS 101 625 625 HIS HIS A . n A 1 102 CYS 102 626 626 CYS CYS A . n A 1 103 ILE 103 627 627 ILE ILE A . n A 1 104 LEU 104 628 628 LEU LEU A . n A 1 105 ASP 105 629 629 ASP ASP A . n A 1 106 VAL 106 630 630 VAL VAL A . n A 1 107 SER 107 631 631 SER SER A . n A 1 108 ALA 108 632 632 ALA ALA A . n A 1 109 ASN 109 633 633 ASN ASN A . n A 1 110 ALA 110 634 634 ALA ALA A . n A 1 111 VAL 111 635 635 VAL VAL A . n A 1 112 ARG 112 636 636 ARG ARG A . n A 1 113 ARG 113 637 637 ARG ARG A . n A 1 114 LEU 114 638 638 LEU LEU A . n A 1 115 GLN 115 639 639 GLN GLN A . n A 1 116 ALA 116 640 640 ALA ALA A . n A 1 117 ALA 117 641 641 ALA ALA A . n A 1 118 HIS 118 642 642 HIS HIS A . n A 1 119 LEU 119 643 643 LEU LEU A . n A 1 120 HIS 120 644 644 HIS HIS A . n A 1 121 PRO 121 645 645 PRO PRO A . n A 1 122 ILE 122 646 646 ILE ILE A . n A 1 123 ALA 123 647 647 ALA ALA A . n A 1 124 ILE 124 648 648 ILE ILE A . n A 1 125 PHE 125 649 649 PHE PHE A . n A 1 126 ILE 126 650 650 ILE ILE A . n A 1 127 ARG 127 651 651 ARG ARG A . n A 1 128 PRO 128 652 652 PRO PRO A . n A 1 129 ARG 129 653 653 ARG ARG A . n A 1 130 SER 130 654 654 SER SER A . n A 1 131 LEU 131 655 655 LEU LEU A . n A 1 132 GLU 132 656 656 GLU GLU A . n A 1 133 ASN 133 657 657 ASN ASN A . n A 1 134 VAL 134 658 658 VAL VAL A . n A 1 135 LEU 135 659 659 LEU LEU A . n A 1 136 GLU 136 660 660 GLU GLU A . n A 1 137 ILE 137 661 661 ILE ILE A . n A 1 138 ASN 138 662 662 ASN ASN A . n A 1 139 LYS 139 663 663 LYS LYS A . n A 1 140 ARG 140 664 664 ARG ARG A . n A 1 141 ILE 141 665 665 ILE ILE A . n A 1 142 THR 142 666 666 THR THR A . n A 1 143 GLU 143 667 667 GLU GLU A . n A 1 144 GLU 144 668 668 GLU GLU A . n A 1 145 GLN 145 669 669 GLN GLN A . n A 1 146 ALA 146 670 670 ALA ALA A . n A 1 147 ARG 147 671 671 ARG ARG A . n A 1 148 LYS 148 672 672 LYS LYS A . n A 1 149 ALA 149 673 673 ALA ALA A . n A 1 150 PHE 150 674 674 PHE PHE A . n A 1 151 ASP 151 675 675 ASP ASP A . n A 1 152 ARG 152 676 676 ARG ARG A . n A 1 153 ALA 153 677 677 ALA ALA A . n A 1 154 THR 154 678 678 THR THR A . n A 1 155 LYS 155 679 679 LYS LYS A . n A 1 156 LEU 156 680 680 LEU LEU A . n A 1 157 GLU 157 681 681 GLU GLU A . n A 1 158 GLN 158 682 682 GLN GLN A . n A 1 159 GLU 159 683 683 GLU GLU A . n A 1 160 PHE 160 684 684 PHE PHE A . n A 1 161 THR 161 685 685 THR THR A . n A 1 162 GLU 162 686 686 GLU GLU A . n A 1 163 CYS 163 687 687 CYS CYS A . n A 1 164 PHE 164 688 688 PHE PHE A . n A 1 165 SER 165 689 689 SER SER A . n A 1 166 ALA 166 690 690 ALA ALA A . n A 1 167 ILE 167 691 691 ILE ILE A . n A 1 168 VAL 168 692 692 VAL VAL A . n A 1 169 GLU 169 693 693 GLU GLU A . n A 1 170 GLY 170 694 694 GLY GLY A . n A 1 171 ASP 171 695 695 ASP ASP A . n A 1 172 SER 172 696 696 SER SER A . n A 1 173 PHE 173 697 697 PHE PHE A . n A 1 174 GLU 174 698 698 GLU GLU A . n A 1 175 GLU 175 699 699 GLU GLU A . n A 1 176 ILE 176 700 700 ILE ILE A . n A 1 177 TYR 177 701 701 TYR TYR A . n A 1 178 HIS 178 702 702 HIS HIS A . n A 1 179 LYS 179 703 703 LYS LYS A . n A 1 180 VAL 180 704 704 VAL VAL A . n A 1 181 LYS 181 705 705 LYS LYS A . n A 1 182 ARG 182 706 706 ARG ARG A . n A 1 183 VAL 183 707 707 VAL VAL A . n A 1 184 ILE 184 708 708 ILE ILE A . n A 1 185 GLU 185 709 709 GLU GLU A . n A 1 186 ASP 186 710 710 ASP ASP A . n A 1 187 LEU 187 711 711 LEU LEU A . n A 1 188 SER 188 712 712 SER SER A . n A 1 189 GLY 189 713 713 GLY GLY A . n B 2 1 ALA 1 2104 ? ? ? B . n B 2 2 GLU 2 2105 2105 GLU GLU B . n B 2 3 LEU 3 2106 2106 LEU LEU B . n B 2 4 GLU 4 2107 2107 GLU GLU B . n B 2 5 GLY 5 2108 2108 GLY GLY B . n B 2 6 GLY 6 2109 2109 GLY GLY B . n B 2 7 PRO 7 2110 2110 PRO PRO B . n B 2 8 TYR 8 2111 2111 TYR TYR B . n B 2 9 SER 9 2112 2112 SER SER B . n B 2 10 PRO 10 2113 2113 PRO PRO B . n B 2 11 LEU 11 2114 2114 LEU LEU B . n B 2 12 GLY 12 2115 2115 GLY GLY B . n B 2 13 LYS 13 2116 2116 LYS LYS B . n B 2 14 ASP 14 2117 2117 ASP ASP B . n B 2 15 TYR 15 2118 2118 TYR TYR B . n B 2 16 ARG 16 2119 2119 ARG ARG B . n B 2 17 LYS 17 2120 2120 LYS LYS B . n B 2 18 ALA 18 2121 2121 ALA ALA B . n B 2 19 GLU 19 2122 2122 GLU GLU B . n B 2 20 GLY 20 2123 2123 GLY GLY B . n B 2 21 GLU 21 2124 ? ? ? B . n B 2 22 ARG 22 2125 ? ? ? B . n B 2 23 GLU 23 2126 ? ? ? B . n B 2 24 GLY 24 2127 ? ? ? B . n B 2 25 GLU 25 2128 ? ? ? B . n B 2 26 GLY 26 2129 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 1 801 1 SO4 SO4 A . D 3 SO4 1 802 2 SO4 SO4 A . E 4 HOH 1 901 6 HOH HOH A . E 4 HOH 2 902 19 HOH HOH A . E 4 HOH 3 903 39 HOH HOH A . E 4 HOH 4 904 2 HOH HOH A . E 4 HOH 5 905 44 HOH HOH A . E 4 HOH 6 906 29 HOH HOH A . E 4 HOH 7 907 11 HOH HOH A . E 4 HOH 8 908 24 HOH HOH A . E 4 HOH 9 909 5 HOH HOH A . E 4 HOH 10 910 28 HOH HOH A . E 4 HOH 11 911 1 HOH HOH A . E 4 HOH 12 912 10 HOH HOH A . E 4 HOH 13 913 35 HOH HOH A . E 4 HOH 14 914 8 HOH HOH A . E 4 HOH 15 915 26 HOH HOH A . E 4 HOH 16 916 36 HOH HOH A . E 4 HOH 17 917 4 HOH HOH A . E 4 HOH 18 918 12 HOH HOH A . E 4 HOH 19 919 34 HOH HOH A . E 4 HOH 20 920 30 HOH HOH A . E 4 HOH 21 921 40 HOH HOH A . E 4 HOH 22 922 42 HOH HOH A . E 4 HOH 23 923 33 HOH HOH A . E 4 HOH 24 924 23 HOH HOH A . E 4 HOH 25 925 7 HOH HOH A . E 4 HOH 26 926 43 HOH HOH A . E 4 HOH 27 927 27 HOH HOH A . E 4 HOH 28 928 41 HOH HOH A . E 4 HOH 29 929 13 HOH HOH A . E 4 HOH 30 930 14 HOH HOH A . E 4 HOH 31 931 22 HOH HOH A . E 4 HOH 32 932 21 HOH HOH A . E 4 HOH 33 933 38 HOH HOH A . E 4 HOH 34 934 20 HOH HOH A . E 4 HOH 35 935 37 HOH HOH A . E 4 HOH 36 936 9 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 572 ? CG ? A GLU 48 CG 2 1 Y 1 A GLU 572 ? CD ? A GLU 48 CD 3 1 Y 1 A GLU 572 ? OE1 ? A GLU 48 OE1 4 1 Y 1 A GLU 572 ? OE2 ? A GLU 48 OE2 5 1 Y 1 A TYR 573 ? CG ? A TYR 49 CG 6 1 Y 1 A TYR 573 ? CD1 ? A TYR 49 CD1 7 1 Y 1 A TYR 573 ? CD2 ? A TYR 49 CD2 8 1 Y 1 A TYR 573 ? CE1 ? A TYR 49 CE1 9 1 Y 1 A TYR 573 ? CE2 ? A TYR 49 CE2 10 1 Y 1 A TYR 573 ? CZ ? A TYR 49 CZ 11 1 Y 1 A TYR 573 ? OH ? A TYR 49 OH 12 1 Y 1 A GLU 587 ? CG ? A GLU 63 CG 13 1 Y 1 A GLU 587 ? CD ? A GLU 63 CD 14 1 Y 1 A GLU 587 ? OE1 ? A GLU 63 OE1 15 1 Y 1 A GLU 587 ? OE2 ? A GLU 63 OE2 16 1 Y 1 A LYS 588 ? CG ? A LYS 64 CG 17 1 Y 1 A LYS 588 ? CD ? A LYS 64 CD 18 1 Y 1 A LYS 588 ? CE ? A LYS 64 CE 19 1 Y 1 A LYS 588 ? NZ ? A LYS 64 NZ 20 1 Y 1 A LYS 591 ? CG ? A LYS 67 CG 21 1 Y 1 A LYS 591 ? CD ? A LYS 67 CD 22 1 Y 1 A LYS 591 ? CE ? A LYS 67 CE 23 1 Y 1 A LYS 591 ? NZ ? A LYS 67 NZ 24 1 Y 1 A ASP 592 ? CG ? A ASP 68 CG 25 1 Y 1 A ASP 592 ? OD1 ? A ASP 68 OD1 26 1 Y 1 A ASP 592 ? OD2 ? A ASP 68 OD2 27 1 Y 1 A LYS 597 ? CG ? A LYS 73 CG 28 1 Y 1 A LYS 597 ? CD ? A LYS 73 CD 29 1 Y 1 A LYS 597 ? CE ? A LYS 73 CE 30 1 Y 1 A LYS 597 ? NZ ? A LYS 73 NZ 31 1 Y 1 A ARG 636 ? CG ? A ARG 112 CG 32 1 Y 1 A ARG 636 ? CD ? A ARG 112 CD 33 1 Y 1 A ARG 636 ? NE ? A ARG 112 NE 34 1 Y 1 A ARG 636 ? CZ ? A ARG 112 CZ 35 1 Y 1 A ARG 636 ? NH1 ? A ARG 112 NH1 36 1 Y 1 A ARG 636 ? NH2 ? A ARG 112 NH2 37 1 Y 1 B GLU 2105 ? CG ? B GLU 2 CG 38 1 Y 1 B GLU 2105 ? CD ? B GLU 2 CD 39 1 Y 1 B GLU 2105 ? OE1 ? B GLU 2 OE1 40 1 Y 1 B GLU 2105 ? OE2 ? B GLU 2 OE2 41 1 Y 1 B LYS 2116 ? CG ? B LYS 13 CG 42 1 Y 1 B LYS 2116 ? CD ? B LYS 13 CD 43 1 Y 1 B LYS 2116 ? CE ? B LYS 13 CE 44 1 Y 1 B LYS 2116 ? NZ ? B LYS 13 NZ 45 1 Y 1 B LYS 2120 ? CG ? B LYS 17 CG 46 1 Y 1 B LYS 2120 ? CD ? B LYS 17 CD 47 1 Y 1 B LYS 2120 ? CE ? B LYS 17 CE 48 1 Y 1 B LYS 2120 ? NZ ? B LYS 17 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10_2155: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.entry_id 5GNV _cell.length_a 62.445 _cell.length_b 156.861 _cell.length_c 59.513 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GNV _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5GNV _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.98 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 58.66 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2M lithium sulfate, 0.1M Bis-Tris pH 6.5 and 25%(w/v) polyethylene glycol 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-06-15 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97928 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97928 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5GNV _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 50.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9354 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 31.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5GNV _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 9335 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.089 _refine.ls_d_res_high 2.596 _refine.ls_percent_reflns_obs 99.48 _refine.ls_R_factor_obs 0.2171 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2152 _refine.ls_R_factor_R_free 0.2571 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.75 _refine.ls_number_reflns_R_free 443 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.33 _refine.pdbx_overall_phase_error 28.49 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1566 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 36 _refine_hist.number_atoms_total 1612 _refine_hist.d_res_high 2.596 _refine_hist.d_res_low 40.089 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.011 ? ? 1605 'X-RAY DIFFRACTION' ? f_angle_d 1.491 ? ? 2169 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 22.008 ? ? 594 'X-RAY DIFFRACTION' ? f_chiral_restr 0.102 ? ? 234 'X-RAY DIFFRACTION' ? f_plane_restr 0.007 ? ? 288 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.5962 2.9717 2884 0.2744 99.00 0.3296 . . 152 . . 'X-RAY DIFFRACTION' . 2.9717 3.7436 2935 0.2238 100.00 0.3215 . . 146 . . 'X-RAY DIFFRACTION' . 3.7436 40.0939 3073 0.1988 100.00 0.2108 . . 145 . . # _struct.entry_id 5GNV _struct.title 'Structure of PSD-95/MAP1A complex reveals unique target recognition mode of MAGUK GK domain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5GNV _struct_keywords.text 'binding-induced folding, PEPTIDE BINDING PROTEIN' _struct_keywords.pdbx_keywords 'PEPTIDE BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP DLG4_RAT P31016 ? 1 ;VHYARPIIILGPTKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIQAHKFIEAGQYNSHLYG TSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPIAIFIRPRSLENVLEINKRITEEQARKAFDRATKLEQEFTECFSA IVEGDSFEEIYHKVKRVIEDLSG ; 531 2 UNP MAP1A_MOUSE Q9QYR6 ? 2 AELEGGPYSPLGKDYRKAEGEREGEG 1866 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5GNV A 7 ? 189 ? P31016 531 ? 713 ? 531 713 2 2 5GNV B 1 ? 26 ? Q9QYR6 1866 ? 1891 ? 2104 2129 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5GNV GLY A 1 ? UNP P31016 ? ? 'expression tag' 525 1 1 5GNV PRO A 2 ? UNP P31016 ? ? 'expression tag' 526 2 1 5GNV GLY A 3 ? UNP P31016 ? ? 'expression tag' 527 3 1 5GNV SER A 4 ? UNP P31016 ? ? 'expression tag' 528 4 1 5GNV GLU A 5 ? UNP P31016 ? ? 'expression tag' 529 5 1 5GNV PHE A 6 ? UNP P31016 ? ? 'expression tag' 530 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1400 ? 1 MORE -17 ? 1 'SSA (A^2)' 10580 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 19 ? PHE A 31 ? THR A 543 PHE A 555 1 ? 13 HELX_P HELX_P2 AA2 SER A 61 ? ALA A 71 ? SER A 585 ALA A 595 1 ? 11 HELX_P HELX_P3 AA3 VAL A 89 ? GLN A 98 ? VAL A 613 GLN A 622 1 ? 10 HELX_P HELX_P4 AA4 ALA A 108 ? ALA A 116 ? ALA A 632 ALA A 640 1 ? 9 HELX_P HELX_P5 AA5 SER A 130 ? ASN A 138 ? SER A 654 ASN A 662 1 ? 9 HELX_P HELX_P6 AA6 THR A 142 ? THR A 161 ? THR A 666 THR A 685 1 ? 20 HELX_P HELX_P7 AA7 GLU A 162 ? PHE A 164 ? GLU A 686 PHE A 688 5 ? 3 HELX_P HELX_P8 AA8 SER A 172 ? GLY A 189 ? SER A 696 GLY A 713 1 ? 18 HELX_P HELX_P9 AA9 LEU B 11 ? GLY B 20 ? LEU B 2114 GLY B 2123 5 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 35 ? GLY A 36 ? PHE A 559 GLY A 560 AA1 2 HIS A 101 ? LEU A 104 ? HIS A 625 LEU A 628 AA1 3 ILE A 13 ? LEU A 16 ? ILE A 537 LEU A 540 AA1 4 ILE A 122 ? ILE A 126 ? ILE A 646 ILE A 650 AA1 5 ALA A 166 ? VAL A 168 ? ALA A 690 VAL A 692 AA2 1 HIS A 57 ? PHE A 58 ? HIS A 581 PHE A 582 AA2 2 HIS A 41 ? THR A 42 ? HIS A 565 THR A 566 AA2 3 HIS A 83 ? SER A 88 ? HIS A 607 SER A 612 AA2 4 PHE A 74 ? TYR A 80 ? PHE A 598 TYR A 604 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLY A 36 ? N GLY A 560 O ILE A 103 ? O ILE A 627 AA1 2 3 O CYS A 102 ? O CYS A 626 N ILE A 13 ? N ILE A 537 AA1 3 4 N LEU A 16 ? N LEU A 540 O ILE A 126 ? O ILE A 650 AA1 4 5 N PHE A 125 ? N PHE A 649 O VAL A 168 ? O VAL A 692 AA2 1 2 O HIS A 57 ? O HIS A 581 N THR A 42 ? N THR A 566 AA2 2 3 N HIS A 41 ? N HIS A 565 O GLY A 86 ? O GLY A 610 AA2 3 4 O THR A 87 ? O THR A 611 N GLU A 76 ? N GLU A 600 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 801 ? 2 'binding site for residue SO4 A 801' AC2 Software A SO4 802 ? 6 'binding site for residue SO4 A 802' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ARG A 54 ? ARG A 578 . ? 1_555 ? 2 AC1 2 ARG A 54 ? ARG A 578 . ? 3_554 ? 3 AC2 6 ARG A 22 ? ARG A 546 . ? 1_555 ? 4 AC2 6 ARG A 22 ? ARG A 546 . ? 3_554 ? 5 AC2 6 LYS A 139 ? LYS A 663 . ? 1_555 ? 6 AC2 6 LYS A 139 ? LYS A 663 . ? 3_554 ? 7 AC2 6 HOH E . ? HOH A 906 . ? 1_555 ? 8 AC2 6 HOH E . ? HOH A 910 . ? 1_555 ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 915 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 915 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_554 _pdbx_validate_symm_contact.dist 2.04 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 572 ? ? -48.90 -73.38 2 1 ARG A 578 ? ? -121.42 -69.84 3 1 HIS A 644 ? ? 43.75 70.02 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id SO4 _pdbx_struct_special_symmetry.auth_seq_id 801 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id SO4 _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 525 ? A GLY 1 2 1 Y 1 A PRO 526 ? A PRO 2 3 1 Y 1 A GLY 527 ? A GLY 3 4 1 Y 1 A SER 528 ? A SER 4 5 1 Y 1 A GLU 529 ? A GLU 5 6 1 Y 1 A PHE 530 ? A PHE 6 7 1 Y 1 A VAL 531 ? A VAL 7 8 1 Y 1 A HIS 532 ? A HIS 8 9 1 Y 1 B ALA 2104 ? B ALA 1 10 1 Y 1 B GLU 2124 ? B GLU 21 11 1 Y 1 B ARG 2125 ? B ARG 22 12 1 Y 1 B GLU 2126 ? B GLU 23 13 1 Y 1 B GLY 2127 ? B GLY 24 14 1 Y 1 B GLU 2128 ? B GLU 25 15 1 Y 1 B GLY 2129 ? B GLY 26 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 SO4 S S N N 304 SO4 O1 O N N 305 SO4 O2 O N N 306 SO4 O3 O N N 307 SO4 O4 O N N 308 THR N N N N 309 THR CA C N S 310 THR C C N N 311 THR O O N N 312 THR CB C N R 313 THR OG1 O N N 314 THR CG2 C N N 315 THR OXT O N N 316 THR H H N N 317 THR H2 H N N 318 THR HA H N N 319 THR HB H N N 320 THR HG1 H N N 321 THR HG21 H N N 322 THR HG22 H N N 323 THR HG23 H N N 324 THR HXT H N N 325 TYR N N N N 326 TYR CA C N S 327 TYR C C N N 328 TYR O O N N 329 TYR CB C N N 330 TYR CG C Y N 331 TYR CD1 C Y N 332 TYR CD2 C Y N 333 TYR CE1 C Y N 334 TYR CE2 C Y N 335 TYR CZ C Y N 336 TYR OH O N N 337 TYR OXT O N N 338 TYR H H N N 339 TYR H2 H N N 340 TYR HA H N N 341 TYR HB2 H N N 342 TYR HB3 H N N 343 TYR HD1 H N N 344 TYR HD2 H N N 345 TYR HE1 H N N 346 TYR HE2 H N N 347 TYR HH H N N 348 TYR HXT H N N 349 VAL N N N N 350 VAL CA C N S 351 VAL C C N N 352 VAL O O N N 353 VAL CB C N N 354 VAL CG1 C N N 355 VAL CG2 C N N 356 VAL OXT O N N 357 VAL H H N N 358 VAL H2 H N N 359 VAL HA H N N 360 VAL HB H N N 361 VAL HG11 H N N 362 VAL HG12 H N N 363 VAL HG13 H N N 364 VAL HG21 H N N 365 VAL HG22 H N N 366 VAL HG23 H N N 367 VAL HXT H N N 368 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 SO4 S O1 doub N N 290 SO4 S O2 doub N N 291 SO4 S O3 sing N N 292 SO4 S O4 sing N N 293 THR N CA sing N N 294 THR N H sing N N 295 THR N H2 sing N N 296 THR CA C sing N N 297 THR CA CB sing N N 298 THR CA HA sing N N 299 THR C O doub N N 300 THR C OXT sing N N 301 THR CB OG1 sing N N 302 THR CB CG2 sing N N 303 THR CB HB sing N N 304 THR OG1 HG1 sing N N 305 THR CG2 HG21 sing N N 306 THR CG2 HG22 sing N N 307 THR CG2 HG23 sing N N 308 THR OXT HXT sing N N 309 TYR N CA sing N N 310 TYR N H sing N N 311 TYR N H2 sing N N 312 TYR CA C sing N N 313 TYR CA CB sing N N 314 TYR CA HA sing N N 315 TYR C O doub N N 316 TYR C OXT sing N N 317 TYR CB CG sing N N 318 TYR CB HB2 sing N N 319 TYR CB HB3 sing N N 320 TYR CG CD1 doub Y N 321 TYR CG CD2 sing Y N 322 TYR CD1 CE1 sing Y N 323 TYR CD1 HD1 sing N N 324 TYR CD2 CE2 doub Y N 325 TYR CD2 HD2 sing N N 326 TYR CE1 CZ doub Y N 327 TYR CE1 HE1 sing N N 328 TYR CE2 CZ sing Y N 329 TYR CE2 HE2 sing N N 330 TYR CZ OH sing N N 331 TYR OH HH sing N N 332 TYR OXT HXT sing N N 333 VAL N CA sing N N 334 VAL N H sing N N 335 VAL N H2 sing N N 336 VAL CA C sing N N 337 VAL CA CB sing N N 338 VAL CA HA sing N N 339 VAL C O doub N N 340 VAL C OXT sing N N 341 VAL CB CG1 sing N N 342 VAL CB CG2 sing N N 343 VAL CB HB sing N N 344 VAL CG1 HG11 sing N N 345 VAL CG1 HG12 sing N N 346 VAL CG1 HG13 sing N N 347 VAL CG2 HG21 sing N N 348 VAL CG2 HG22 sing N N 349 VAL CG2 HG23 sing N N 350 VAL OXT HXT sing N N 351 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Natural Science Foundation of China' China 31470733 1 'the Shanghai YangFan Plan for Young Scientists' China 14YF1406700 2 'the SIBS Frontier Science Program for talented young scientists' China 2014KIP101 3 # _atom_sites.entry_id 5GNV _atom_sites.fract_transf_matrix[1][1] 0.016014 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006375 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016803 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_