data_5GV0 # _entry.id 5GV0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5GV0 pdb_00005gv0 10.2210/pdb5gv0/pdb WWPDB D_1300001363 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-10-12 2 'Structure model' 1 1 2016-10-19 3 'Structure model' 1 2 2020-02-26 4 'Structure model' 1 3 2020-07-29 5 'Structure model' 1 4 2024-10-16 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' citation 3 3 'Structure model' diffrn_source 4 3 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' chem_comp 6 4 'Structure model' entity 7 4 'Structure model' pdbx_chem_comp_identifier 8 4 'Structure model' pdbx_entity_nonpoly 9 4 'Structure model' struct_conn 10 4 'Structure model' struct_site 11 4 'Structure model' struct_site_gen 12 5 'Structure model' chem_comp 13 5 'Structure model' chem_comp_atom 14 5 'Structure model' chem_comp_bond 15 5 'Structure model' database_2 16 5 'Structure model' pdbx_entry_details 17 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.type' 2 3 'Structure model' '_citation.journal_id_CSD' 3 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 5 4 'Structure model' '_chem_comp.name' 6 4 'Structure model' '_entity.pdbx_description' 7 4 'Structure model' '_pdbx_entity_nonpoly.name' 8 4 'Structure model' '_struct_conn.pdbx_role' 9 5 'Structure model' '_chem_comp.pdbx_synonyms' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5GV0 _pdbx_database_status.recvd_initial_deposition_date 2016-09-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 5GV3 _pdbx_database_related.db_name PDB _pdbx_database_related.details . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tomabechi, Y.' 1 'Ehara, H.' 2 'Kukimoto-Niino, M.' 3 'Shirouzu, M.' 4 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochem.Biophys.Res.Commun. _citation.journal_id_ASTM BBRCA9 _citation.journal_id_CSD 0146 _citation.journal_id_ISSN 1090-2104 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 479 _citation.language ? _citation.page_first 489 _citation.page_last 495 _citation.title 'Lysosome-associated membrane proteins-1 and -2 (LAMP-1 and LAMP-2) assemble via distinct modes' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bbrc.2016.09.093 _citation.pdbx_database_id_PubMed 27663661 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Terasawa, K.' 1 ? primary 'Tomabechi, Y.' 2 ? primary 'Ikeda, M.' 3 ? primary 'Ehara, H.' 4 ? primary 'Kukimoto-Niino, M.' 5 ? primary 'Wakiyama, M.' 6 ? primary 'Podyma-Inoue, K.A.' 7 ? primary 'Rajapakshe, A.R.' 8 ? primary 'Watabe, T.' 9 ? primary 'Shirouzu, M.' 10 ? primary 'Hara-Yokoyama, M.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Lysosome-associated membrane glycoprotein 1' 18253.611 1 ? ? 'UNP residues 208-370' ? 2 non-polymer man 'SULFATE ION' 96.063 2 ? ? ? ? 3 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 4 ? ? ? ? 4 water nat water 18.015 201 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Lysosome-associated membrane protein 1,120 kDa lysosomal membrane glycoprotein,CD107 antigen-like family member A,LGP-120,Lysosomal membrane glycoprotein A,LGP-A,P2B ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DPTVSKYNVTGNNGTCLLASMALQLNITYLKKDNKTVTRAFNISPNDTSSGSCGINLVTLKVENKNRALELQFGMNASSS LFFLQGVRLNMTLPDALVPTFSISNHSLKALQATVGNSYKCNTEEHIFVSKMLSLNVFSVQVQAFKVDSDRFGSVEECVQ DGNNGSSL ; _entity_poly.pdbx_seq_one_letter_code_can ;DPTVSKYNVTGNNGTCLLASMALQLNITYLKKDNKTVTRAFNISPNDTSSGSCGINLVTLKVENKNRALELQFGMNASSS LFFLQGVRLNMTLPDALVPTFSISNHSLKALQATVGNSYKCNTEEHIFVSKMLSLNVFSVQVQAFKVDSDRFGSVEECVQ DGNNGSSL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 PRO n 1 3 THR n 1 4 VAL n 1 5 SER n 1 6 LYS n 1 7 TYR n 1 8 ASN n 1 9 VAL n 1 10 THR n 1 11 GLY n 1 12 ASN n 1 13 ASN n 1 14 GLY n 1 15 THR n 1 16 CYS n 1 17 LEU n 1 18 LEU n 1 19 ALA n 1 20 SER n 1 21 MET n 1 22 ALA n 1 23 LEU n 1 24 GLN n 1 25 LEU n 1 26 ASN n 1 27 ILE n 1 28 THR n 1 29 TYR n 1 30 LEU n 1 31 LYS n 1 32 LYS n 1 33 ASP n 1 34 ASN n 1 35 LYS n 1 36 THR n 1 37 VAL n 1 38 THR n 1 39 ARG n 1 40 ALA n 1 41 PHE n 1 42 ASN n 1 43 ILE n 1 44 SER n 1 45 PRO n 1 46 ASN n 1 47 ASP n 1 48 THR n 1 49 SER n 1 50 SER n 1 51 GLY n 1 52 SER n 1 53 CYS n 1 54 GLY n 1 55 ILE n 1 56 ASN n 1 57 LEU n 1 58 VAL n 1 59 THR n 1 60 LEU n 1 61 LYS n 1 62 VAL n 1 63 GLU n 1 64 ASN n 1 65 LYS n 1 66 ASN n 1 67 ARG n 1 68 ALA n 1 69 LEU n 1 70 GLU n 1 71 LEU n 1 72 GLN n 1 73 PHE n 1 74 GLY n 1 75 MET n 1 76 ASN n 1 77 ALA n 1 78 SER n 1 79 SER n 1 80 SER n 1 81 LEU n 1 82 PHE n 1 83 PHE n 1 84 LEU n 1 85 GLN n 1 86 GLY n 1 87 VAL n 1 88 ARG n 1 89 LEU n 1 90 ASN n 1 91 MET n 1 92 THR n 1 93 LEU n 1 94 PRO n 1 95 ASP n 1 96 ALA n 1 97 LEU n 1 98 VAL n 1 99 PRO n 1 100 THR n 1 101 PHE n 1 102 SER n 1 103 ILE n 1 104 SER n 1 105 ASN n 1 106 HIS n 1 107 SER n 1 108 LEU n 1 109 LYS n 1 110 ALA n 1 111 LEU n 1 112 GLN n 1 113 ALA n 1 114 THR n 1 115 VAL n 1 116 GLY n 1 117 ASN n 1 118 SER n 1 119 TYR n 1 120 LYS n 1 121 CYS n 1 122 ASN n 1 123 THR n 1 124 GLU n 1 125 GLU n 1 126 HIS n 1 127 ILE n 1 128 PHE n 1 129 VAL n 1 130 SER n 1 131 LYS n 1 132 MET n 1 133 LEU n 1 134 SER n 1 135 LEU n 1 136 ASN n 1 137 VAL n 1 138 PHE n 1 139 SER n 1 140 VAL n 1 141 GLN n 1 142 VAL n 1 143 GLN n 1 144 ALA n 1 145 PHE n 1 146 LYS n 1 147 VAL n 1 148 ASP n 1 149 SER n 1 150 ASP n 1 151 ARG n 1 152 PHE n 1 153 GLY n 1 154 SER n 1 155 VAL n 1 156 GLU n 1 157 GLU n 1 158 CYS n 1 159 VAL n 1 160 GLN n 1 161 ASP n 1 162 GLY n 1 163 ASN n 1 164 ASN n 1 165 GLY n 1 166 SER n 1 167 SER n 1 168 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 168 _entity_src_gen.gene_src_common_name Mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Lamp1, Lamp-1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line HEK293 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pOriP _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 207 207 ASP ASP A . n A 1 2 PRO 2 208 208 PRO PRO A . n A 1 3 THR 3 209 209 THR THR A . n A 1 4 VAL 4 210 210 VAL VAL A . n A 1 5 SER 5 211 211 SER SER A . n A 1 6 LYS 6 212 212 LYS LYS A . n A 1 7 TYR 7 213 213 TYR TYR A . n A 1 8 ASN 8 214 214 ASN ASN A . n A 1 9 VAL 9 215 215 VAL VAL A . n A 1 10 THR 10 216 216 THR THR A . n A 1 11 GLY 11 217 217 GLY GLY A . n A 1 12 ASN 12 218 218 ASN ASN A . n A 1 13 ASN 13 219 219 ASN ASN A . n A 1 14 GLY 14 220 220 GLY GLY A . n A 1 15 THR 15 221 221 THR THR A . n A 1 16 CYS 16 222 222 CYS CYS A . n A 1 17 LEU 17 223 223 LEU LEU A . n A 1 18 LEU 18 224 224 LEU LEU A . n A 1 19 ALA 19 225 225 ALA ALA A . n A 1 20 SER 20 226 226 SER SER A . n A 1 21 MET 21 227 227 MET MET A . n A 1 22 ALA 22 228 228 ALA ALA A . n A 1 23 LEU 23 229 229 LEU LEU A . n A 1 24 GLN 24 230 230 GLN GLN A . n A 1 25 LEU 25 231 231 LEU LEU A . n A 1 26 ASN 26 232 232 ASN ASN A . n A 1 27 ILE 27 233 233 ILE ILE A . n A 1 28 THR 28 234 234 THR THR A . n A 1 29 TYR 29 235 235 TYR TYR A . n A 1 30 LEU 30 236 236 LEU LEU A . n A 1 31 LYS 31 237 237 LYS LYS A . n A 1 32 LYS 32 238 238 LYS LYS A . n A 1 33 ASP 33 239 239 ASP ASP A . n A 1 34 ASN 34 240 240 ASN ASN A . n A 1 35 LYS 35 241 241 LYS LYS A . n A 1 36 THR 36 242 242 THR THR A . n A 1 37 VAL 37 243 243 VAL VAL A . n A 1 38 THR 38 244 244 THR THR A . n A 1 39 ARG 39 245 245 ARG ARG A . n A 1 40 ALA 40 246 246 ALA ALA A . n A 1 41 PHE 41 247 247 PHE PHE A . n A 1 42 ASN 42 248 248 ASN ASN A . n A 1 43 ILE 43 249 249 ILE ILE A . n A 1 44 SER 44 250 250 SER SER A . n A 1 45 PRO 45 251 251 PRO PRO A . n A 1 46 ASN 46 252 252 ASN ASN A . n A 1 47 ASP 47 253 253 ASP ASP A . n A 1 48 THR 48 254 254 THR THR A . n A 1 49 SER 49 255 255 SER SER A . n A 1 50 SER 50 256 256 SER SER A . n A 1 51 GLY 51 257 257 GLY GLY A . n A 1 52 SER 52 258 258 SER SER A . n A 1 53 CYS 53 259 259 CYS CYS A . n A 1 54 GLY 54 260 260 GLY GLY A . n A 1 55 ILE 55 261 261 ILE ILE A . n A 1 56 ASN 56 262 262 ASN ASN A . n A 1 57 LEU 57 263 263 LEU LEU A . n A 1 58 VAL 58 264 264 VAL VAL A . n A 1 59 THR 59 265 265 THR THR A . n A 1 60 LEU 60 266 266 LEU LEU A . n A 1 61 LYS 61 267 267 LYS LYS A . n A 1 62 VAL 62 268 268 VAL VAL A . n A 1 63 GLU 63 269 269 GLU GLU A . n A 1 64 ASN 64 270 270 ASN ASN A . n A 1 65 LYS 65 271 271 LYS LYS A . n A 1 66 ASN 66 272 272 ASN ASN A . n A 1 67 ARG 67 273 273 ARG ARG A . n A 1 68 ALA 68 274 274 ALA ALA A . n A 1 69 LEU 69 275 275 LEU LEU A . n A 1 70 GLU 70 276 276 GLU GLU A . n A 1 71 LEU 71 277 277 LEU LEU A . n A 1 72 GLN 72 278 278 GLN GLN A . n A 1 73 PHE 73 279 279 PHE PHE A . n A 1 74 GLY 74 280 280 GLY GLY A . n A 1 75 MET 75 281 281 MET MET A . n A 1 76 ASN 76 282 282 ASN ASN A . n A 1 77 ALA 77 283 283 ALA ALA A . n A 1 78 SER 78 284 284 SER SER A . n A 1 79 SER 79 285 285 SER SER A . n A 1 80 SER 80 286 286 SER SER A . n A 1 81 LEU 81 287 287 LEU LEU A . n A 1 82 PHE 82 288 288 PHE PHE A . n A 1 83 PHE 83 289 289 PHE PHE A . n A 1 84 LEU 84 290 290 LEU LEU A . n A 1 85 GLN 85 291 291 GLN GLN A . n A 1 86 GLY 86 292 292 GLY GLY A . n A 1 87 VAL 87 293 293 VAL VAL A . n A 1 88 ARG 88 294 294 ARG ARG A . n A 1 89 LEU 89 295 295 LEU LEU A . n A 1 90 ASN 90 296 296 ASN ASN A . n A 1 91 MET 91 297 297 MET MET A . n A 1 92 THR 92 298 298 THR THR A . n A 1 93 LEU 93 299 299 LEU LEU A . n A 1 94 PRO 94 300 300 PRO PRO A . n A 1 95 ASP 95 301 301 ASP ASP A . n A 1 96 ALA 96 302 302 ALA ALA A . n A 1 97 LEU 97 303 303 LEU LEU A . n A 1 98 VAL 98 304 304 VAL VAL A . n A 1 99 PRO 99 305 305 PRO PRO A . n A 1 100 THR 100 306 306 THR THR A . n A 1 101 PHE 101 307 307 PHE PHE A . n A 1 102 SER 102 308 308 SER SER A . n A 1 103 ILE 103 309 309 ILE ILE A . n A 1 104 SER 104 310 310 SER SER A . n A 1 105 ASN 105 311 311 ASN ASN A . n A 1 106 HIS 106 312 312 HIS HIS A . n A 1 107 SER 107 313 313 SER SER A . n A 1 108 LEU 108 314 314 LEU LEU A . n A 1 109 LYS 109 315 315 LYS LYS A . n A 1 110 ALA 110 316 316 ALA ALA A . n A 1 111 LEU 111 317 317 LEU LEU A . n A 1 112 GLN 112 318 318 GLN GLN A . n A 1 113 ALA 113 319 319 ALA ALA A . n A 1 114 THR 114 320 320 THR THR A . n A 1 115 VAL 115 321 321 VAL VAL A . n A 1 116 GLY 116 322 322 GLY GLY A . n A 1 117 ASN 117 323 323 ASN ASN A . n A 1 118 SER 118 324 324 SER SER A . n A 1 119 TYR 119 325 325 TYR TYR A . n A 1 120 LYS 120 326 326 LYS LYS A . n A 1 121 CYS 121 327 327 CYS CYS A . n A 1 122 ASN 122 328 328 ASN ASN A . n A 1 123 THR 123 329 329 THR THR A . n A 1 124 GLU 124 330 330 GLU GLU A . n A 1 125 GLU 125 331 331 GLU GLU A . n A 1 126 HIS 126 332 332 HIS HIS A . n A 1 127 ILE 127 333 333 ILE ILE A . n A 1 128 PHE 128 334 334 PHE PHE A . n A 1 129 VAL 129 335 335 VAL VAL A . n A 1 130 SER 130 336 336 SER SER A . n A 1 131 LYS 131 337 337 LYS LYS A . n A 1 132 MET 132 338 338 MET MET A . n A 1 133 LEU 133 339 339 LEU LEU A . n A 1 134 SER 134 340 340 SER SER A . n A 1 135 LEU 135 341 341 LEU LEU A . n A 1 136 ASN 136 342 342 ASN ASN A . n A 1 137 VAL 137 343 343 VAL VAL A . n A 1 138 PHE 138 344 344 PHE PHE A . n A 1 139 SER 139 345 345 SER SER A . n A 1 140 VAL 140 346 346 VAL VAL A . n A 1 141 GLN 141 347 347 GLN GLN A . n A 1 142 VAL 142 348 348 VAL VAL A . n A 1 143 GLN 143 349 349 GLN GLN A . n A 1 144 ALA 144 350 350 ALA ALA A . n A 1 145 PHE 145 351 351 PHE PHE A . n A 1 146 LYS 146 352 352 LYS LYS A . n A 1 147 VAL 147 353 353 VAL VAL A . n A 1 148 ASP 148 354 354 ASP ASP A . n A 1 149 SER 149 355 355 SER SER A . n A 1 150 ASP 150 356 356 ASP ASP A . n A 1 151 ARG 151 357 357 ARG ARG A . n A 1 152 PHE 152 358 358 PHE PHE A . n A 1 153 GLY 153 359 359 GLY GLY A . n A 1 154 SER 154 360 360 SER SER A . n A 1 155 VAL 155 361 361 VAL VAL A . n A 1 156 GLU 156 362 362 GLU GLU A . n A 1 157 GLU 157 363 363 GLU GLU A . n A 1 158 CYS 158 364 364 CYS CYS A . n A 1 159 VAL 159 365 365 VAL VAL A . n A 1 160 GLN 160 366 366 GLN GLN A . n A 1 161 ASP 161 367 367 ASP ASP A . n A 1 162 GLY 162 368 368 GLY GLY A . n A 1 163 ASN 163 369 ? ? ? A . n A 1 164 ASN 164 370 ? ? ? A . n A 1 165 GLY 165 371 ? ? ? A . n A 1 166 SER 166 372 ? ? ? A . n A 1 167 SER 167 373 ? ? ? A . n A 1 168 LEU 168 374 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 401 1 SO4 SO4 A . C 2 SO4 1 402 2 SO4 SO4 A . D 3 NAG 1 403 1 NAG NAG A . E 3 NAG 1 404 2 NAG NAG A . F 3 NAG 1 405 3 NAG NAG A . G 3 NAG 1 406 4 NAG NAG A . H 4 HOH 1 501 183 HOH HOH A . H 4 HOH 2 502 189 HOH HOH A . H 4 HOH 3 503 175 HOH HOH A . H 4 HOH 4 504 103 HOH HOH A . H 4 HOH 5 505 139 HOH HOH A . H 4 HOH 6 506 102 HOH HOH A . H 4 HOH 7 507 177 HOH HOH A . H 4 HOH 8 508 120 HOH HOH A . H 4 HOH 9 509 166 HOH HOH A . H 4 HOH 10 510 99 HOH HOH A . H 4 HOH 11 511 66 HOH HOH A . H 4 HOH 12 512 133 HOH HOH A . H 4 HOH 13 513 146 HOH HOH A . H 4 HOH 14 514 184 HOH HOH A . H 4 HOH 15 515 96 HOH HOH A . H 4 HOH 16 516 137 HOH HOH A . H 4 HOH 17 517 91 HOH HOH A . H 4 HOH 18 518 2 HOH HOH A . H 4 HOH 19 519 80 HOH HOH A . H 4 HOH 20 520 143 HOH HOH A . H 4 HOH 21 521 92 HOH HOH A . H 4 HOH 22 522 42 HOH HOH A . H 4 HOH 23 523 113 HOH HOH A . H 4 HOH 24 524 176 HOH HOH A . H 4 HOH 25 525 77 HOH HOH A . H 4 HOH 26 526 43 HOH HOH A . H 4 HOH 27 527 31 HOH HOH A . H 4 HOH 28 528 57 HOH HOH A . H 4 HOH 29 529 41 HOH HOH A . H 4 HOH 30 530 125 HOH HOH A . H 4 HOH 31 531 163 HOH HOH A . H 4 HOH 32 532 30 HOH HOH A . H 4 HOH 33 533 54 HOH HOH A . H 4 HOH 34 534 20 HOH HOH A . H 4 HOH 35 535 109 HOH HOH A . H 4 HOH 36 536 37 HOH HOH A . H 4 HOH 37 537 18 HOH HOH A . H 4 HOH 38 538 16 HOH HOH A . H 4 HOH 39 539 4 HOH HOH A . H 4 HOH 40 540 84 HOH HOH A . H 4 HOH 41 541 6 HOH HOH A . H 4 HOH 42 542 112 HOH HOH A . H 4 HOH 43 543 142 HOH HOH A . H 4 HOH 44 544 135 HOH HOH A . H 4 HOH 45 545 13 HOH HOH A . H 4 HOH 46 546 111 HOH HOH A . H 4 HOH 47 547 35 HOH HOH A . H 4 HOH 48 548 85 HOH HOH A . H 4 HOH 49 549 48 HOH HOH A . H 4 HOH 50 550 29 HOH HOH A . H 4 HOH 51 551 5 HOH HOH A . H 4 HOH 52 552 152 HOH HOH A . H 4 HOH 53 553 128 HOH HOH A . H 4 HOH 54 554 105 HOH HOH A . H 4 HOH 55 555 71 HOH HOH A . H 4 HOH 56 556 1 HOH HOH A . H 4 HOH 57 557 123 HOH HOH A . H 4 HOH 58 558 22 HOH HOH A . H 4 HOH 59 559 60 HOH HOH A . H 4 HOH 60 560 33 HOH HOH A . H 4 HOH 61 561 47 HOH HOH A . H 4 HOH 62 562 101 HOH HOH A . H 4 HOH 63 563 14 HOH HOH A . H 4 HOH 64 564 68 HOH HOH A . H 4 HOH 65 565 83 HOH HOH A . H 4 HOH 66 566 34 HOH HOH A . H 4 HOH 67 567 107 HOH HOH A . H 4 HOH 68 568 63 HOH HOH A . H 4 HOH 69 569 94 HOH HOH A . H 4 HOH 70 570 67 HOH HOH A . H 4 HOH 71 571 28 HOH HOH A . H 4 HOH 72 572 21 HOH HOH A . H 4 HOH 73 573 51 HOH HOH A . H 4 HOH 74 574 45 HOH HOH A . H 4 HOH 75 575 193 HOH HOH A . H 4 HOH 76 576 62 HOH HOH A . H 4 HOH 77 577 167 HOH HOH A . H 4 HOH 78 578 148 HOH HOH A . H 4 HOH 79 579 81 HOH HOH A . H 4 HOH 80 580 24 HOH HOH A . H 4 HOH 81 581 32 HOH HOH A . H 4 HOH 82 582 116 HOH HOH A . H 4 HOH 83 583 50 HOH HOH A . H 4 HOH 84 584 56 HOH HOH A . H 4 HOH 85 585 181 HOH HOH A . H 4 HOH 86 586 58 HOH HOH A . H 4 HOH 87 587 110 HOH HOH A . H 4 HOH 88 588 15 HOH HOH A . H 4 HOH 89 589 79 HOH HOH A . H 4 HOH 90 590 46 HOH HOH A . H 4 HOH 91 591 87 HOH HOH A . H 4 HOH 92 592 44 HOH HOH A . H 4 HOH 93 593 27 HOH HOH A . H 4 HOH 94 594 173 HOH HOH A . H 4 HOH 95 595 75 HOH HOH A . H 4 HOH 96 596 171 HOH HOH A . H 4 HOH 97 597 3 HOH HOH A . H 4 HOH 98 598 131 HOH HOH A . H 4 HOH 99 599 197 HOH HOH A . H 4 HOH 100 600 11 HOH HOH A . H 4 HOH 101 601 69 HOH HOH A . H 4 HOH 102 602 17 HOH HOH A . H 4 HOH 103 603 98 HOH HOH A . H 4 HOH 104 604 196 HOH HOH A . H 4 HOH 105 605 144 HOH HOH A . H 4 HOH 106 606 23 HOH HOH A . H 4 HOH 107 607 82 HOH HOH A . H 4 HOH 108 608 9 HOH HOH A . H 4 HOH 109 609 86 HOH HOH A . H 4 HOH 110 610 78 HOH HOH A . H 4 HOH 111 611 168 HOH HOH A . H 4 HOH 112 612 76 HOH HOH A . H 4 HOH 113 613 151 HOH HOH A . H 4 HOH 114 614 65 HOH HOH A . H 4 HOH 115 615 194 HOH HOH A . H 4 HOH 116 616 190 HOH HOH A . H 4 HOH 117 617 108 HOH HOH A . H 4 HOH 118 618 72 HOH HOH A . H 4 HOH 119 619 150 HOH HOH A . H 4 HOH 120 620 117 HOH HOH A . H 4 HOH 121 621 147 HOH HOH A . H 4 HOH 122 622 39 HOH HOH A . H 4 HOH 123 623 145 HOH HOH A . H 4 HOH 124 624 53 HOH HOH A . H 4 HOH 125 625 70 HOH HOH A . H 4 HOH 126 626 8 HOH HOH A . H 4 HOH 127 627 59 HOH HOH A . H 4 HOH 128 628 64 HOH HOH A . H 4 HOH 129 629 136 HOH HOH A . H 4 HOH 130 630 36 HOH HOH A . H 4 HOH 131 631 127 HOH HOH A . H 4 HOH 132 632 195 HOH HOH A . H 4 HOH 133 633 7 HOH HOH A . H 4 HOH 134 634 180 HOH HOH A . H 4 HOH 135 635 10 HOH HOH A . H 4 HOH 136 636 74 HOH HOH A . H 4 HOH 137 637 121 HOH HOH A . H 4 HOH 138 638 89 HOH HOH A . H 4 HOH 139 639 174 HOH HOH A . H 4 HOH 140 640 52 HOH HOH A . H 4 HOH 141 641 191 HOH HOH A . H 4 HOH 142 642 55 HOH HOH A . H 4 HOH 143 643 90 HOH HOH A . H 4 HOH 144 644 124 HOH HOH A . H 4 HOH 145 645 61 HOH HOH A . H 4 HOH 146 646 100 HOH HOH A . H 4 HOH 147 647 114 HOH HOH A . H 4 HOH 148 648 155 HOH HOH A . H 4 HOH 149 649 73 HOH HOH A . H 4 HOH 150 650 97 HOH HOH A . H 4 HOH 151 651 182 HOH HOH A . H 4 HOH 152 652 162 HOH HOH A . H 4 HOH 153 653 40 HOH HOH A . H 4 HOH 154 654 49 HOH HOH A . H 4 HOH 155 655 38 HOH HOH A . H 4 HOH 156 656 19 HOH HOH A . H 4 HOH 157 657 165 HOH HOH A . H 4 HOH 158 658 178 HOH HOH A . H 4 HOH 159 659 198 HOH HOH A . H 4 HOH 160 660 141 HOH HOH A . H 4 HOH 161 661 200 HOH HOH A . H 4 HOH 162 662 93 HOH HOH A . H 4 HOH 163 663 156 HOH HOH A . H 4 HOH 164 664 119 HOH HOH A . H 4 HOH 165 665 164 HOH HOH A . H 4 HOH 166 666 115 HOH HOH A . H 4 HOH 167 667 169 HOH HOH A . H 4 HOH 168 668 130 HOH HOH A . H 4 HOH 169 669 157 HOH HOH A . H 4 HOH 170 670 153 HOH HOH A . H 4 HOH 171 671 104 HOH HOH A . H 4 HOH 172 672 186 HOH HOH A . H 4 HOH 173 673 192 HOH HOH A . H 4 HOH 174 674 118 HOH HOH A . H 4 HOH 175 675 170 HOH HOH A . H 4 HOH 176 676 154 HOH HOH A . H 4 HOH 177 677 201 HOH HOH A . H 4 HOH 178 678 185 HOH HOH A . H 4 HOH 179 679 106 HOH HOH A . H 4 HOH 180 680 132 HOH HOH A . H 4 HOH 181 681 138 HOH HOH A . H 4 HOH 182 682 26 HOH HOH A . H 4 HOH 183 683 140 HOH HOH A . H 4 HOH 184 684 187 HOH HOH A . H 4 HOH 185 685 160 HOH HOH A . H 4 HOH 186 686 149 HOH HOH A . H 4 HOH 187 687 88 HOH HOH A . H 4 HOH 188 688 129 HOH HOH A . H 4 HOH 189 689 172 HOH HOH A . H 4 HOH 190 690 25 HOH HOH A . H 4 HOH 191 691 159 HOH HOH A . H 4 HOH 192 692 179 HOH HOH A . H 4 HOH 193 693 161 HOH HOH A . H 4 HOH 194 694 126 HOH HOH A . H 4 HOH 195 695 158 HOH HOH A . H 4 HOH 196 696 188 HOH HOH A . H 4 HOH 197 697 122 HOH HOH A . H 4 HOH 198 698 12 HOH HOH A . H 4 HOH 199 699 199 HOH HOH A . H 4 HOH 200 700 95 HOH HOH A . H 4 HOH 201 701 134 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1690 1 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.20 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 6 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5GV0 _cell.details ? _cell.formula_units_Z ? _cell.length_a 31.596 _cell.length_a_esd ? _cell.length_b 50.047 _cell.length_b_esd ? _cell.length_c 95.144 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5GV0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5GV0 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.13 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 42.18 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2M ammonium sulphate, 0.1M sodium HEPES (pH 7.5), 2% (v/v) polyethylene glycol 400' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-10-06 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL26B2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL26B2 _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5GV0 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.500 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 24809 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.300 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.600 _reflns.pdbx_Rmerge_I_obs 0.059 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 50.639 _reflns.pdbx_netI_over_sigmaI 16.400 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.500 1.530 ? ? ? ? ? ? ? 94.100 ? ? ? ? 0.148 ? ? ? ? ? ? ? ? 4.500 ? ? ? ? ? ? ? 1 1 0.980 ? 1.530 1.550 ? ? ? ? ? ? ? 99.300 ? ? ? ? 0.153 ? ? ? ? ? ? ? ? 4.900 ? ? ? ? ? ? ? 2 1 0.982 ? 1.550 1.580 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.143 ? ? ? ? ? ? ? ? 5.700 ? ? ? ? ? ? ? 3 1 0.987 ? 1.580 1.620 ? ? ? ? ? ? ? 99.900 ? ? ? ? 0.136 ? ? ? ? ? ? ? ? 7.000 ? ? ? ? ? ? ? 4 1 0.992 ? 1.620 1.650 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.118 ? ? ? ? ? ? ? ? 7.100 ? ? ? ? ? ? ? 5 1 0.990 ? 1.650 1.690 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.114 ? ? ? ? ? ? ? ? 7.100 ? ? ? ? ? ? ? 6 1 0.992 ? 1.690 1.730 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.108 ? ? ? ? ? ? ? ? 7.000 ? ? ? ? ? ? ? 7 1 0.991 ? 1.730 1.780 ? ? ? ? ? ? ? 99.900 ? ? ? ? 0.097 ? ? ? ? ? ? ? ? 7.000 ? ? ? ? ? ? ? 8 1 0.993 ? 1.780 1.830 ? ? ? ? ? ? ? 99.700 ? ? ? ? 0.088 ? ? ? ? ? ? ? ? 7.000 ? ? ? ? ? ? ? 9 1 0.993 ? 1.830 1.890 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.085 ? ? ? ? ? ? ? ? 6.900 ? ? ? ? ? ? ? 10 1 0.994 ? 1.890 1.960 ? ? ? ? ? ? ? 99.900 ? ? ? ? 0.076 ? ? ? ? ? ? ? ? 6.800 ? ? ? ? ? ? ? 11 1 0.995 ? 1.960 2.040 ? ? ? ? ? ? ? 99.800 ? ? ? ? 0.071 ? ? ? ? ? ? ? ? 6.800 ? ? ? ? ? ? ? 12 1 0.995 ? 2.040 2.130 ? ? ? ? ? ? ? 99.900 ? ? ? ? 0.067 ? ? ? ? ? ? ? ? 6.900 ? ? ? ? ? ? ? 13 1 0.995 ? 2.130 2.240 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.065 ? ? ? ? ? ? ? ? 7.000 ? ? ? ? ? ? ? 14 1 0.996 ? 2.240 2.380 ? ? ? ? ? ? ? 99.900 ? ? ? ? 0.066 ? ? ? ? ? ? ? ? 7.000 ? ? ? ? ? ? ? 15 1 0.996 ? 2.380 2.560 ? ? ? ? ? ? ? 99.900 ? ? ? ? 0.067 ? ? ? ? ? ? ? ? 7.000 ? ? ? ? ? ? ? 16 1 0.995 ? 2.560 2.820 ? ? ? ? ? ? ? 99.900 ? ? ? ? 0.066 ? ? ? ? ? ? ? ? 6.600 ? ? ? ? ? ? ? 17 1 0.997 ? 2.820 3.230 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.061 ? ? ? ? ? ? ? ? 6.300 ? ? ? ? ? ? ? 18 1 0.997 ? 3.230 4.070 ? ? ? ? ? ? ? 99.200 ? ? ? ? 0.052 ? ? ? ? ? ? ? ? 6.500 ? ? ? ? ? ? ? 19 1 0.997 ? 4.070 50.000 ? ? ? ? ? ? ? 95.600 ? ? ? ? 0.037 ? ? ? ? ? ? ? ? 6.300 ? ? ? ? ? ? ? 20 1 0.999 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 79.350 _refine.B_iso_mean 19.8439 _refine.B_iso_min 7.860 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5GV0 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.5000 _refine.ls_d_res_low 34.4800 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 24751 _refine.ls_number_reflns_R_free 2000 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.2600 _refine.ls_percent_reflns_R_free 8.0800 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1761 _refine.ls_R_factor_R_free 0.1963 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1743 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.390 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 18.6200 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1200 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.5000 _refine_hist.d_res_low 34.4800 _refine_hist.pdbx_number_atoms_ligand 66 _refine_hist.number_atoms_solvent 201 _refine_hist.number_atoms_total 1503 _refine_hist.pdbx_number_residues_total 162 _refine_hist.pdbx_B_iso_mean_ligand 29.73 _refine_hist.pdbx_B_iso_mean_solvent 30.52 _refine_hist.pdbx_number_atoms_protein 1236 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.005 ? 1323 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.037 ? 1795 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.043 ? 223 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 227 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 11.691 ? 472 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.5003 1.5378 1664 . 135 1529 95.0000 . . . 0.2390 . 0.1871 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.5378 1.5794 1757 . 141 1616 100.0000 . . . 0.2247 . 0.1798 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.5794 1.6259 1728 . 140 1588 100.0000 . . . 0.2077 . 0.1756 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.6259 1.6784 1764 . 143 1621 100.0000 . . . 0.2048 . 0.1683 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.6784 1.7383 1740 . 141 1599 100.0000 . . . 0.2146 . 0.1715 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.7383 1.8079 1745 . 140 1605 100.0000 . . . 0.2007 . 0.1734 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.8079 1.8902 1760 . 143 1617 100.0000 . . . 0.1737 . 0.1606 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.8902 1.9899 1774 . 142 1632 100.0000 . . . 0.2009 . 0.1658 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.9899 2.1145 1783 . 145 1638 100.0000 . . . 0.1686 . 0.1617 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.1145 2.2778 1777 . 144 1633 100.0000 . . . 0.2129 . 0.1622 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.2778 2.5069 1772 . 142 1630 100.0000 . . . 0.1944 . 0.1725 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.5069 2.8695 1811 . 147 1664 100.0000 . . . 0.2071 . 0.1842 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.8695 3.6147 1808 . 146 1662 100.0000 . . . 0.1990 . 0.1664 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 3.6147 34.4894 1868 . 151 1717 97.0000 . . . 0.1826 . 0.1909 . . . . . . 14 . . . # _struct.entry_id 5GV0 _struct.title 'Crystal structure of the membrane-proximal domain of mouse lysosome-associated membrane protein 1 (LAMP-1)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5GV0 _struct_keywords.text 'MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LAMP1_MOUSE _struct_ref.pdbx_db_accession P11438 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PTVSKYNVTGNNGTCLLASMALQLNITYLKKDNKTVTRAFNISPNDTSSGSCGINLVTLKVENKNRALELQFGMNASSSL FFLQGVRLNMTLPDALVPTFSISNHSLKALQATVGNSYKCNTEEHIFVSKMLSLNVFSVQVQAFKVDSDRFGSVEECVQD GNN ; _struct_ref.pdbx_align_begin 208 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5GV0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 164 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P11438 _struct_ref_seq.db_align_beg 208 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 370 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 208 _struct_ref_seq.pdbx_auth_seq_align_end 370 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5GV0 ASP A 1 ? UNP P11438 ? ? 'expression tag' 207 1 1 5GV0 GLY A 165 ? UNP P11438 ? ? 'expression tag' 371 2 1 5GV0 SER A 166 ? UNP P11438 ? ? 'expression tag' 372 3 1 5GV0 SER A 167 ? UNP P11438 ? ? 'expression tag' 373 4 1 5GV0 LEU A 168 ? UNP P11438 ? ? 'expression tag' 374 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1470 ? 1 MORE -6 ? 1 'SSA (A^2)' 8790 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id VAL _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 159 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLY _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 162 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id VAL _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 365 _struct_conf.end_auth_comp_id GLY _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 368 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 16 SG ? ? ? 1_555 A CYS 53 SG ? ? A CYS 222 A CYS 259 1_555 ? ? ? ? ? ? ? 2.026 ? ? disulf2 disulf ? ? A CYS 121 SG ? ? ? 1_555 A CYS 158 SG ? ? A CYS 327 A CYS 364 1_555 ? ? ? ? ? ? ? 2.040 ? ? covale1 covale one ? A ASN 13 ND2 ? ? ? 1_555 F NAG . C1 ? ? A ASN 219 A NAG 405 1_555 ? ? ? ? ? ? ? 1.436 ? N-Glycosylation covale2 covale one ? A ASN 76 ND2 ? ? ? 1_555 G NAG . C1 ? ? A ASN 282 A NAG 406 1_555 ? ? ? ? ? ? ? 1.432 ? N-Glycosylation covale3 covale one ? A ASN 90 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 296 A NAG 404 1_555 ? ? ? ? ? ? ? 1.437 ? N-Glycosylation covale4 covale one ? A ASN 105 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 311 A NAG 403 1_555 ? ? ? ? ? ? ? 1.442 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG D . ? ASN A 105 ? NAG A 403 ? 1_555 ASN A 311 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG E . ? ASN A 90 ? NAG A 404 ? 1_555 ASN A 296 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 NAG F . ? ASN A 13 ? NAG A 405 ? 1_555 ASN A 219 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 4 NAG G . ? ASN A 76 ? NAG A 406 ? 1_555 ASN A 282 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 5 CYS A 16 ? CYS A 53 ? CYS A 222 ? 1_555 CYS A 259 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 121 ? CYS A 158 ? CYS A 327 ? 1_555 CYS A 364 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 5 ? AA3 ? 5 ? AA4 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 5 ? GLY A 11 ? SER A 211 GLY A 217 AA1 2 GLY A 14 ? LEU A 30 ? GLY A 220 LEU A 236 AA1 3 LEU A 133 ? ALA A 144 ? LEU A 339 ALA A 350 AA1 4 GLU A 125 ? SER A 130 ? GLU A 331 SER A 336 AA2 1 THR A 36 ? ASN A 42 ? THR A 242 ASN A 248 AA2 2 GLY A 14 ? LEU A 30 ? GLY A 220 LEU A 236 AA2 3 LEU A 133 ? ALA A 144 ? LEU A 339 ALA A 350 AA2 4 SER A 118 ? CYS A 121 ? SER A 324 CYS A 327 AA2 5 VAL A 155 ? GLU A 157 ? VAL A 361 GLU A 363 AA3 1 THR A 48 ? SER A 52 ? THR A 254 SER A 258 AA3 2 LEU A 57 ? ASN A 64 ? LEU A 263 ASN A 270 AA3 3 ARG A 67 ? MET A 75 ? ARG A 273 MET A 281 AA3 4 LEU A 81 ? THR A 92 ? LEU A 287 THR A 298 AA3 5 THR A 100 ? ASN A 105 ? THR A 306 ASN A 311 AA4 1 THR A 48 ? SER A 52 ? THR A 254 SER A 258 AA4 2 LEU A 57 ? ASN A 64 ? LEU A 263 ASN A 270 AA4 3 ARG A 67 ? MET A 75 ? ARG A 273 MET A 281 AA4 4 LEU A 81 ? THR A 92 ? LEU A 287 THR A 298 AA4 5 ALA A 110 ? THR A 114 ? ALA A 316 THR A 320 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 9 ? N VAL A 215 O CYS A 16 ? O CYS A 222 AA1 2 3 N GLN A 24 ? N GLN A 230 O ASN A 136 ? O ASN A 342 AA1 3 4 O VAL A 137 ? O VAL A 343 N GLU A 125 ? N GLU A 331 AA2 1 2 O PHE A 41 ? O PHE A 247 N LEU A 25 ? N LEU A 231 AA2 2 3 N GLN A 24 ? N GLN A 230 O ASN A 136 ? O ASN A 342 AA2 3 4 O VAL A 142 ? O VAL A 348 N TYR A 119 ? N TYR A 325 AA2 4 5 N SER A 118 ? N SER A 324 O GLU A 156 ? O GLU A 362 AA3 1 2 N SER A 50 ? N SER A 256 O LYS A 61 ? O LYS A 267 AA3 2 3 N VAL A 58 ? N VAL A 264 O PHE A 73 ? O PHE A 279 AA3 3 4 N GLU A 70 ? N GLU A 276 O ARG A 88 ? O ARG A 294 AA3 4 5 N LEU A 89 ? N LEU A 295 O ILE A 103 ? O ILE A 309 AA4 1 2 N SER A 50 ? N SER A 256 O LYS A 61 ? O LYS A 267 AA4 2 3 N VAL A 58 ? N VAL A 264 O PHE A 73 ? O PHE A 279 AA4 3 4 N GLU A 70 ? N GLU A 276 O ARG A 88 ? O ARG A 294 AA4 4 5 N LEU A 84 ? N LEU A 290 O ALA A 110 ? O ALA A 316 # _pdbx_entry_details.entry_id 5GV0 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 651 ? ? O A HOH 693 ? ? 1.89 2 1 O A HOH 524 ? ? O A HOH 692 ? ? 2.00 3 1 O A HOH 604 ? ? O A HOH 611 ? ? 2.03 4 1 OG A SER 211 ? ? O A HOH 501 ? ? 2.06 5 1 NZ A LYS 352 ? ? O A HOH 502 ? ? 2.09 6 1 N A SER 284 ? ? O A HOH 503 ? ? 2.12 7 1 O A HOH 639 ? ? O A HOH 697 ? ? 2.14 8 1 O A HOH 604 ? ? O A HOH 629 ? ? 2.14 9 1 O A HOH 505 ? ? O A HOH 667 ? ? 2.15 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 510 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 685 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_645 _pdbx_validate_symm_contact.dist 1.89 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id PHE _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 351 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 80.18 _pdbx_validate_torsion.psi -92.62 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASN 369 ? A ASN 163 2 1 Y 1 A ASN 370 ? A ASN 164 3 1 Y 1 A GLY 371 ? A GLY 165 4 1 Y 1 A SER 372 ? A SER 166 5 1 Y 1 A SER 373 ? A SER 167 6 1 Y 1 A LEU 374 ? A LEU 168 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 NAG C1 C N R 250 NAG C2 C N R 251 NAG C3 C N R 252 NAG C4 C N S 253 NAG C5 C N R 254 NAG C6 C N N 255 NAG C7 C N N 256 NAG C8 C N N 257 NAG N2 N N N 258 NAG O1 O N N 259 NAG O3 O N N 260 NAG O4 O N N 261 NAG O5 O N N 262 NAG O6 O N N 263 NAG O7 O N N 264 NAG H1 H N N 265 NAG H2 H N N 266 NAG H3 H N N 267 NAG H4 H N N 268 NAG H5 H N N 269 NAG H61 H N N 270 NAG H62 H N N 271 NAG H81 H N N 272 NAG H82 H N N 273 NAG H83 H N N 274 NAG HN2 H N N 275 NAG HO1 H N N 276 NAG HO3 H N N 277 NAG HO4 H N N 278 NAG HO6 H N N 279 PHE N N N N 280 PHE CA C N S 281 PHE C C N N 282 PHE O O N N 283 PHE CB C N N 284 PHE CG C Y N 285 PHE CD1 C Y N 286 PHE CD2 C Y N 287 PHE CE1 C Y N 288 PHE CE2 C Y N 289 PHE CZ C Y N 290 PHE OXT O N N 291 PHE H H N N 292 PHE H2 H N N 293 PHE HA H N N 294 PHE HB2 H N N 295 PHE HB3 H N N 296 PHE HD1 H N N 297 PHE HD2 H N N 298 PHE HE1 H N N 299 PHE HE2 H N N 300 PHE HZ H N N 301 PHE HXT H N N 302 PRO N N N N 303 PRO CA C N S 304 PRO C C N N 305 PRO O O N N 306 PRO CB C N N 307 PRO CG C N N 308 PRO CD C N N 309 PRO OXT O N N 310 PRO H H N N 311 PRO HA H N N 312 PRO HB2 H N N 313 PRO HB3 H N N 314 PRO HG2 H N N 315 PRO HG3 H N N 316 PRO HD2 H N N 317 PRO HD3 H N N 318 PRO HXT H N N 319 SER N N N N 320 SER CA C N S 321 SER C C N N 322 SER O O N N 323 SER CB C N N 324 SER OG O N N 325 SER OXT O N N 326 SER H H N N 327 SER H2 H N N 328 SER HA H N N 329 SER HB2 H N N 330 SER HB3 H N N 331 SER HG H N N 332 SER HXT H N N 333 SO4 S S N N 334 SO4 O1 O N N 335 SO4 O2 O N N 336 SO4 O3 O N N 337 SO4 O4 O N N 338 THR N N N N 339 THR CA C N S 340 THR C C N N 341 THR O O N N 342 THR CB C N R 343 THR OG1 O N N 344 THR CG2 C N N 345 THR OXT O N N 346 THR H H N N 347 THR H2 H N N 348 THR HA H N N 349 THR HB H N N 350 THR HG1 H N N 351 THR HG21 H N N 352 THR HG22 H N N 353 THR HG23 H N N 354 THR HXT H N N 355 TYR N N N N 356 TYR CA C N S 357 TYR C C N N 358 TYR O O N N 359 TYR CB C N N 360 TYR CG C Y N 361 TYR CD1 C Y N 362 TYR CD2 C Y N 363 TYR CE1 C Y N 364 TYR CE2 C Y N 365 TYR CZ C Y N 366 TYR OH O N N 367 TYR OXT O N N 368 TYR H H N N 369 TYR H2 H N N 370 TYR HA H N N 371 TYR HB2 H N N 372 TYR HB3 H N N 373 TYR HD1 H N N 374 TYR HD2 H N N 375 TYR HE1 H N N 376 TYR HE2 H N N 377 TYR HH H N N 378 TYR HXT H N N 379 VAL N N N N 380 VAL CA C N S 381 VAL C C N N 382 VAL O O N N 383 VAL CB C N N 384 VAL CG1 C N N 385 VAL CG2 C N N 386 VAL OXT O N N 387 VAL H H N N 388 VAL H2 H N N 389 VAL HA H N N 390 VAL HB H N N 391 VAL HG11 H N N 392 VAL HG12 H N N 393 VAL HG13 H N N 394 VAL HG21 H N N 395 VAL HG22 H N N 396 VAL HG23 H N N 397 VAL HXT H N N 398 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NAG C1 C2 sing N N 237 NAG C1 O1 sing N N 238 NAG C1 O5 sing N N 239 NAG C1 H1 sing N N 240 NAG C2 C3 sing N N 241 NAG C2 N2 sing N N 242 NAG C2 H2 sing N N 243 NAG C3 C4 sing N N 244 NAG C3 O3 sing N N 245 NAG C3 H3 sing N N 246 NAG C4 C5 sing N N 247 NAG C4 O4 sing N N 248 NAG C4 H4 sing N N 249 NAG C5 C6 sing N N 250 NAG C5 O5 sing N N 251 NAG C5 H5 sing N N 252 NAG C6 O6 sing N N 253 NAG C6 H61 sing N N 254 NAG C6 H62 sing N N 255 NAG C7 C8 sing N N 256 NAG C7 N2 sing N N 257 NAG C7 O7 doub N N 258 NAG C8 H81 sing N N 259 NAG C8 H82 sing N N 260 NAG C8 H83 sing N N 261 NAG N2 HN2 sing N N 262 NAG O1 HO1 sing N N 263 NAG O3 HO3 sing N N 264 NAG O4 HO4 sing N N 265 NAG O6 HO6 sing N N 266 PHE N CA sing N N 267 PHE N H sing N N 268 PHE N H2 sing N N 269 PHE CA C sing N N 270 PHE CA CB sing N N 271 PHE CA HA sing N N 272 PHE C O doub N N 273 PHE C OXT sing N N 274 PHE CB CG sing N N 275 PHE CB HB2 sing N N 276 PHE CB HB3 sing N N 277 PHE CG CD1 doub Y N 278 PHE CG CD2 sing Y N 279 PHE CD1 CE1 sing Y N 280 PHE CD1 HD1 sing N N 281 PHE CD2 CE2 doub Y N 282 PHE CD2 HD2 sing N N 283 PHE CE1 CZ doub Y N 284 PHE CE1 HE1 sing N N 285 PHE CE2 CZ sing Y N 286 PHE CE2 HE2 sing N N 287 PHE CZ HZ sing N N 288 PHE OXT HXT sing N N 289 PRO N CA sing N N 290 PRO N CD sing N N 291 PRO N H sing N N 292 PRO CA C sing N N 293 PRO CA CB sing N N 294 PRO CA HA sing N N 295 PRO C O doub N N 296 PRO C OXT sing N N 297 PRO CB CG sing N N 298 PRO CB HB2 sing N N 299 PRO CB HB3 sing N N 300 PRO CG CD sing N N 301 PRO CG HG2 sing N N 302 PRO CG HG3 sing N N 303 PRO CD HD2 sing N N 304 PRO CD HD3 sing N N 305 PRO OXT HXT sing N N 306 SER N CA sing N N 307 SER N H sing N N 308 SER N H2 sing N N 309 SER CA C sing N N 310 SER CA CB sing N N 311 SER CA HA sing N N 312 SER C O doub N N 313 SER C OXT sing N N 314 SER CB OG sing N N 315 SER CB HB2 sing N N 316 SER CB HB3 sing N N 317 SER OG HG sing N N 318 SER OXT HXT sing N N 319 SO4 S O1 doub N N 320 SO4 S O2 doub N N 321 SO4 S O3 sing N N 322 SO4 S O4 sing N N 323 THR N CA sing N N 324 THR N H sing N N 325 THR N H2 sing N N 326 THR CA C sing N N 327 THR CA CB sing N N 328 THR CA HA sing N N 329 THR C O doub N N 330 THR C OXT sing N N 331 THR CB OG1 sing N N 332 THR CB CG2 sing N N 333 THR CB HB sing N N 334 THR OG1 HG1 sing N N 335 THR CG2 HG21 sing N N 336 THR CG2 HG22 sing N N 337 THR CG2 HG23 sing N N 338 THR OXT HXT sing N N 339 TYR N CA sing N N 340 TYR N H sing N N 341 TYR N H2 sing N N 342 TYR CA C sing N N 343 TYR CA CB sing N N 344 TYR CA HA sing N N 345 TYR C O doub N N 346 TYR C OXT sing N N 347 TYR CB CG sing N N 348 TYR CB HB2 sing N N 349 TYR CB HB3 sing N N 350 TYR CG CD1 doub Y N 351 TYR CG CD2 sing Y N 352 TYR CD1 CE1 sing Y N 353 TYR CD1 HD1 sing N N 354 TYR CD2 CE2 doub Y N 355 TYR CD2 HD2 sing N N 356 TYR CE1 CZ doub Y N 357 TYR CE1 HE1 sing N N 358 TYR CE2 CZ sing Y N 359 TYR CE2 HE2 sing N N 360 TYR CZ OH sing N N 361 TYR OH HH sing N N 362 TYR OXT HXT sing N N 363 VAL N CA sing N N 364 VAL N H sing N N 365 VAL N H2 sing N N 366 VAL CA C sing N N 367 VAL CA CB sing N N 368 VAL CA HA sing N N 369 VAL C O doub N N 370 VAL C OXT sing N N 371 VAL CB CG1 sing N N 372 VAL CB CG2 sing N N 373 VAL CB HB sing N N 374 VAL CG1 HG11 sing N N 375 VAL CG1 HG12 sing N N 376 VAL CG1 HG13 sing N N 377 VAL CG2 HG21 sing N N 378 VAL CG2 HG22 sing N N 379 VAL CG2 HG23 sing N N 380 VAL OXT HXT sing N N 381 # _atom_sites.entry_id 5GV0 _atom_sites.fract_transf_matrix[1][1] 0.031650 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019981 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010510 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_