HEADER ISOMERASE/DNA/ISOMERASE INHIBITOR 12-SEP-16 5GWK TITLE HUMAN TOPOISOMERASE IIALPHA IN COMPLEX WITH DNA AND ETOPOSIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA TOPOISOMERASE 2-ALPHA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 430-1188; COMPND 5 SYNONYM: DNA TOPOISOMERASE II,ALPHA ISOZYME; COMPND 6 EC: 5.99.1.3; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'-D(P*AP*GP*CP*CP*GP*AP*GP*C)-3'); COMPND 10 CHAIN: C, E; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'-D(P*TP*GP*CP*AP*GP*CP*TP*CP*GP*GP*CP*T)-3'); COMPND 14 CHAIN: D, F; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TOP2A, TOP2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET51B; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630 KEYWDS TYPE II TOPOISOMERASE, ANTI-CANCER DRUG, TOPOII CLEAVAGE COMPLEX, KEYWDS 2 ISOMERASE-DNA-ISOMERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.R.WANG,C.C.WU,N.L.CHAN REVDAT 4 20-NOV-24 5GWK 1 REMARK REVDAT 3 08-NOV-23 5GWK 1 COMPND HETNAM REVDAT 2 08-NOV-17 5GWK 1 SOURCE JRNL REVDAT 1 23-AUG-17 5GWK 0 JRNL AUTH Y.R.WANG,S.F.CHEN,C.C.WU,Y.W.LIAO,T.S.LIN,K.T.LIU,Y.S.CHEN, JRNL AUTH 2 T.K.LI,T.C.CHIEN,N.L.CHAN JRNL TITL PRODUCING IRREVERSIBLE TOPOISOMERASE II-MEDIATED DNA BREAKS JRNL TITL 2 BY SITE-SPECIFIC PT(II)-METHIONINE COORDINATION CHEMISTRY JRNL REF NUCLEIC ACIDS RES. V. 45 10861 2017 JRNL REFN ESSN 1362-4962 JRNL PMID 28977631 JRNL DOI 10.1093/NAR/GKX742 REMARK 2 REMARK 2 RESOLUTION. 3.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 45898 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.360 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.4893 - 7.5490 0.92 3110 142 0.1627 0.1829 REMARK 3 2 7.5490 - 6.0124 1.00 3225 147 0.1955 0.2259 REMARK 3 3 6.0124 - 5.2585 1.00 3163 144 0.2090 0.2698 REMARK 3 4 5.2585 - 4.7804 1.00 3177 145 0.1945 0.2406 REMARK 3 5 4.7804 - 4.4393 1.00 3164 144 0.1896 0.2181 REMARK 3 6 4.4393 - 4.1785 1.00 3151 143 0.1935 0.2289 REMARK 3 7 4.1785 - 3.9699 1.00 3129 143 0.2031 0.2717 REMARK 3 8 3.9699 - 3.7976 1.00 3126 142 0.2281 0.2219 REMARK 3 9 3.7976 - 3.6517 1.00 3130 143 0.2335 0.2977 REMARK 3 10 3.6517 - 3.5260 1.00 3128 143 0.2432 0.2954 REMARK 3 11 3.5260 - 3.4159 1.00 3093 141 0.2338 0.3340 REMARK 3 12 3.4159 - 3.3184 1.00 3138 142 0.2500 0.2936 REMARK 3 13 3.3184 - 3.2312 1.00 3110 142 0.2535 0.3193 REMARK 3 14 3.2312 - 3.1525 0.98 3054 139 0.2597 0.3240 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 13032 REMARK 3 ANGLE : 0.566 17754 REMARK 3 CHIRALITY : 0.023 1948 REMARK 3 PLANARITY : 0.003 2114 REMARK 3 DIHEDRAL : 12.215 5024 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5GWK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1300001563. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13C1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97622 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45909 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.150 REMARK 200 RESOLUTION RANGE LOW (A) : 27.488 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.48000 REMARK 200 FOR THE DATA SET : 24.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.20 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3QX3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MAGNESIUM ACETATE, 2-(N REMARK 280 -MORPHOLINO)ETHANESULFONIC ACID, 2-METHYL-2,4-PENTANEDIOL, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 52.55650 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 99.42800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 52.55650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 99.42800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 68600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -120.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 403 REMARK 465 ALA A 404 REMARK 465 SER A 405 REMARK 465 TRP A 406 REMARK 465 SER A 407 REMARK 465 HIS A 408 REMARK 465 PRO A 409 REMARK 465 GLN A 410 REMARK 465 PHE A 411 REMARK 465 GLU A 412 REMARK 465 LYS A 413 REMARK 465 GLY A 414 REMARK 465 ALA A 415 REMARK 465 ASP A 416 REMARK 465 ASP A 417 REMARK 465 ASP A 418 REMARK 465 ASP A 419 REMARK 465 LYS A 420 REMARK 465 VAL A 421 REMARK 465 PRO A 422 REMARK 465 ASP A 423 REMARK 465 PRO A 424 REMARK 465 THR A 425 REMARK 465 SER A 426 REMARK 465 VAL A 427 REMARK 465 ASP A 428 REMARK 465 ALA A 429 REMARK 465 VAL A 430 REMARK 465 LYS A 431 REMARK 465 HIS A 432 REMARK 465 ASN A 433 REMARK 465 ARG A 434 REMARK 465 ILE A 435 REMARK 465 THR A 947 REMARK 465 GLU A 948 REMARK 465 LYS A 949 REMARK 465 LYS A 1096 REMARK 465 VAL A 1097 REMARK 465 PRO A 1098 REMARK 465 ASP A 1099 REMARK 465 GLU A 1100 REMARK 465 GLU A 1101 REMARK 465 GLU A 1102 REMARK 465 ASN A 1103 REMARK 465 GLU A 1104 REMARK 465 GLU A 1105 REMARK 465 SER A 1106 REMARK 465 ASP A 1107 REMARK 465 ASN A 1108 REMARK 465 GLU A 1109 REMARK 465 LYS A 1110 REMARK 465 GLU A 1111 REMARK 465 THR A 1112 REMARK 465 GLU A 1113 REMARK 465 LYS A 1114 REMARK 465 SER A 1115 REMARK 465 ASP A 1116 REMARK 465 SER A 1117 REMARK 465 VAL A 1118 REMARK 465 THR A 1119 REMARK 465 ASP A 1120 REMARK 465 ASP A 1188 REMARK 465 GLY A 1189 REMARK 465 ALA A 1190 REMARK 465 PRO A 1191 REMARK 465 GLY A 1192 REMARK 465 PHE A 1193 REMARK 465 SER A 1194 REMARK 465 SER A 1195 REMARK 465 ILE A 1196 REMARK 465 SER A 1197 REMARK 465 ALA A 1198 REMARK 465 HIS A 1199 REMARK 465 HIS A 1200 REMARK 465 HIS A 1201 REMARK 465 HIS A 1202 REMARK 465 HIS A 1203 REMARK 465 HIS A 1204 REMARK 465 HIS A 1205 REMARK 465 HIS A 1206 REMARK 465 HIS A 1207 REMARK 465 HIS A 1208 REMARK 465 MET B 403 REMARK 465 ALA B 404 REMARK 465 SER B 405 REMARK 465 TRP B 406 REMARK 465 SER B 407 REMARK 465 HIS B 408 REMARK 465 PRO B 409 REMARK 465 GLN B 410 REMARK 465 PHE B 411 REMARK 465 GLU B 412 REMARK 465 LYS B 413 REMARK 465 GLY B 414 REMARK 465 ALA B 415 REMARK 465 ASP B 416 REMARK 465 ASP B 417 REMARK 465 ASP B 418 REMARK 465 ASP B 419 REMARK 465 LYS B 420 REMARK 465 VAL B 421 REMARK 465 PRO B 422 REMARK 465 ASP B 423 REMARK 465 PRO B 424 REMARK 465 THR B 425 REMARK 465 SER B 426 REMARK 465 VAL B 427 REMARK 465 ASP B 428 REMARK 465 ALA B 429 REMARK 465 VAL B 430 REMARK 465 LYS B 431 REMARK 465 HIS B 432 REMARK 465 ASN B 433 REMARK 465 ARG B 434 REMARK 465 ILE B 435 REMARK 465 THR B 947 REMARK 465 GLU B 948 REMARK 465 LYS B 949 REMARK 465 LYS B 1096 REMARK 465 VAL B 1097 REMARK 465 PRO B 1098 REMARK 465 ASP B 1099 REMARK 465 GLU B 1100 REMARK 465 GLU B 1101 REMARK 465 GLU B 1102 REMARK 465 ASN B 1103 REMARK 465 GLU B 1104 REMARK 465 GLU B 1105 REMARK 465 SER B 1106 REMARK 465 ASP B 1107 REMARK 465 ASN B 1108 REMARK 465 GLU B 1109 REMARK 465 LYS B 1110 REMARK 465 GLU B 1111 REMARK 465 THR B 1112 REMARK 465 GLU B 1113 REMARK 465 LYS B 1114 REMARK 465 SER B 1115 REMARK 465 ASP B 1116 REMARK 465 SER B 1117 REMARK 465 VAL B 1118 REMARK 465 THR B 1119 REMARK 465 ASP B 1120 REMARK 465 ASP B 1188 REMARK 465 GLY B 1189 REMARK 465 ALA B 1190 REMARK 465 PRO B 1191 REMARK 465 GLY B 1192 REMARK 465 PHE B 1193 REMARK 465 SER B 1194 REMARK 465 SER B 1195 REMARK 465 ILE B 1196 REMARK 465 SER B 1197 REMARK 465 ALA B 1198 REMARK 465 HIS B 1199 REMARK 465 HIS B 1200 REMARK 465 HIS B 1201 REMARK 465 HIS B 1202 REMARK 465 HIS B 1203 REMARK 465 HIS B 1204 REMARK 465 HIS B 1205 REMARK 465 HIS B 1206 REMARK 465 HIS B 1207 REMARK 465 HIS B 1208 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 442 68.43 -106.11 REMARK 500 ASN A 451 44.32 -94.08 REMARK 500 ARG A 478 -154.85 -158.84 REMARK 500 ASP A 479 -48.67 60.81 REMARK 500 GLN A 542 31.42 -95.96 REMARK 500 ASN A 583 -104.14 -111.39 REMARK 500 ASP A 630 64.92 -105.91 REMARK 500 GLN A 657 62.36 -118.13 REMARK 500 GLU A 702 -52.08 -122.40 REMARK 500 ASN A 774 27.52 -142.95 REMARK 500 SER A 778 -99.35 -102.72 REMARK 500 VAL A 836 -158.53 -138.23 REMARK 500 PRO A 846 95.57 -60.92 REMARK 500 LEU A 902 -87.78 -96.54 REMARK 500 ASN A 917 -157.97 -151.54 REMARK 500 VAL A 939 -55.31 -122.09 REMARK 500 ASN A 945 -129.27 -115.91 REMARK 500 SER A 999 57.37 -95.44 REMARK 500 ASP A1004 -168.74 -77.34 REMARK 500 ASN A1067 19.24 59.32 REMARK 500 ASP A1085 107.84 -52.55 REMARK 500 ASP B 442 68.53 -106.34 REMARK 500 ASN B 451 44.47 -94.18 REMARK 500 GLN B 542 31.37 -95.77 REMARK 500 ASN B 583 -104.14 -111.32 REMARK 500 ASP B 630 65.08 -105.83 REMARK 500 GLN B 657 62.53 -118.01 REMARK 500 GLU B 702 -52.18 -122.60 REMARK 500 ASN B 774 27.41 -142.93 REMARK 500 SER B 778 -99.40 -102.70 REMARK 500 VAL B 836 -158.73 -138.32 REMARK 500 PRO B 846 95.68 -60.86 REMARK 500 LEU B 902 -87.82 -96.64 REMARK 500 ASN B 917 -157.90 -151.45 REMARK 500 VAL B 939 -55.43 -122.35 REMARK 500 ASN B 945 -129.34 -115.81 REMARK 500 SER B 999 57.53 -95.44 REMARK 500 ASP B1004 -168.45 -77.22 REMARK 500 ASN B1067 19.22 59.55 REMARK 500 ASP B1085 107.86 -52.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 541 OD2 REMARK 620 2 ASP A 543 OD2 94.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 541 OD2 REMARK 620 2 ASP B 543 OD2 96.4 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 1302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 1301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 1302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EVP D 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EVP F 102 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3QX3 RELATED DB: PDB REMARK 900 RELATED ID: 5GWI RELATED DB: PDB REMARK 900 RELATED ID: 5GWJ RELATED DB: PDB DBREF 5GWK A 429 1188 UNP P11388 TOP2A_HUMAN 429 1188 DBREF 5GWK B 429 1188 UNP P11388 TOP2A_HUMAN 429 1188 DBREF 5GWK C 1 8 PDB 5GWK 5GWK 1 8 DBREF 5GWK D 9 20 PDB 5GWK 5GWK 9 20 DBREF 5GWK E 1 8 PDB 5GWK 5GWK 1 8 DBREF 5GWK F 9 20 PDB 5GWK 5GWK 9 20 SEQADV 5GWK MET A 403 UNP P11388 EXPRESSION TAG SEQADV 5GWK ALA A 404 UNP P11388 EXPRESSION TAG SEQADV 5GWK SER A 405 UNP P11388 EXPRESSION TAG SEQADV 5GWK TRP A 406 UNP P11388 EXPRESSION TAG SEQADV 5GWK SER A 407 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS A 408 UNP P11388 EXPRESSION TAG SEQADV 5GWK PRO A 409 UNP P11388 EXPRESSION TAG SEQADV 5GWK GLN A 410 UNP P11388 EXPRESSION TAG SEQADV 5GWK PHE A 411 UNP P11388 EXPRESSION TAG SEQADV 5GWK GLU A 412 UNP P11388 EXPRESSION TAG SEQADV 5GWK LYS A 413 UNP P11388 EXPRESSION TAG SEQADV 5GWK GLY A 414 UNP P11388 EXPRESSION TAG SEQADV 5GWK ALA A 415 UNP P11388 EXPRESSION TAG SEQADV 5GWK ASP A 416 UNP P11388 EXPRESSION TAG SEQADV 5GWK ASP A 417 UNP P11388 EXPRESSION TAG SEQADV 5GWK ASP A 418 UNP P11388 EXPRESSION TAG SEQADV 5GWK ASP A 419 UNP P11388 EXPRESSION TAG SEQADV 5GWK LYS A 420 UNP P11388 EXPRESSION TAG SEQADV 5GWK VAL A 421 UNP P11388 EXPRESSION TAG SEQADV 5GWK PRO A 422 UNP P11388 EXPRESSION TAG SEQADV 5GWK ASP A 423 UNP P11388 EXPRESSION TAG SEQADV 5GWK PRO A 424 UNP P11388 EXPRESSION TAG SEQADV 5GWK THR A 425 UNP P11388 EXPRESSION TAG SEQADV 5GWK SER A 426 UNP P11388 EXPRESSION TAG SEQADV 5GWK VAL A 427 UNP P11388 EXPRESSION TAG SEQADV 5GWK ASP A 428 UNP P11388 EXPRESSION TAG SEQADV 5GWK GLY A 1189 UNP P11388 EXPRESSION TAG SEQADV 5GWK ALA A 1190 UNP P11388 EXPRESSION TAG SEQADV 5GWK PRO A 1191 UNP P11388 EXPRESSION TAG SEQADV 5GWK GLY A 1192 UNP P11388 EXPRESSION TAG SEQADV 5GWK PHE A 1193 UNP P11388 EXPRESSION TAG SEQADV 5GWK SER A 1194 UNP P11388 EXPRESSION TAG SEQADV 5GWK SER A 1195 UNP P11388 EXPRESSION TAG SEQADV 5GWK ILE A 1196 UNP P11388 EXPRESSION TAG SEQADV 5GWK SER A 1197 UNP P11388 EXPRESSION TAG SEQADV 5GWK ALA A 1198 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS A 1199 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS A 1200 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS A 1201 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS A 1202 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS A 1203 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS A 1204 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS A 1205 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS A 1206 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS A 1207 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS A 1208 UNP P11388 EXPRESSION TAG SEQADV 5GWK MET B 403 UNP P11388 EXPRESSION TAG SEQADV 5GWK ALA B 404 UNP P11388 EXPRESSION TAG SEQADV 5GWK SER B 405 UNP P11388 EXPRESSION TAG SEQADV 5GWK TRP B 406 UNP P11388 EXPRESSION TAG SEQADV 5GWK SER B 407 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS B 408 UNP P11388 EXPRESSION TAG SEQADV 5GWK PRO B 409 UNP P11388 EXPRESSION TAG SEQADV 5GWK GLN B 410 UNP P11388 EXPRESSION TAG SEQADV 5GWK PHE B 411 UNP P11388 EXPRESSION TAG SEQADV 5GWK GLU B 412 UNP P11388 EXPRESSION TAG SEQADV 5GWK LYS B 413 UNP P11388 EXPRESSION TAG SEQADV 5GWK GLY B 414 UNP P11388 EXPRESSION TAG SEQADV 5GWK ALA B 415 UNP P11388 EXPRESSION TAG SEQADV 5GWK ASP B 416 UNP P11388 EXPRESSION TAG SEQADV 5GWK ASP B 417 UNP P11388 EXPRESSION TAG SEQADV 5GWK ASP B 418 UNP P11388 EXPRESSION TAG SEQADV 5GWK ASP B 419 UNP P11388 EXPRESSION TAG SEQADV 5GWK LYS B 420 UNP P11388 EXPRESSION TAG SEQADV 5GWK VAL B 421 UNP P11388 EXPRESSION TAG SEQADV 5GWK PRO B 422 UNP P11388 EXPRESSION TAG SEQADV 5GWK ASP B 423 UNP P11388 EXPRESSION TAG SEQADV 5GWK PRO B 424 UNP P11388 EXPRESSION TAG SEQADV 5GWK THR B 425 UNP P11388 EXPRESSION TAG SEQADV 5GWK SER B 426 UNP P11388 EXPRESSION TAG SEQADV 5GWK VAL B 427 UNP P11388 EXPRESSION TAG SEQADV 5GWK ASP B 428 UNP P11388 EXPRESSION TAG SEQADV 5GWK GLY B 1189 UNP P11388 EXPRESSION TAG SEQADV 5GWK ALA B 1190 UNP P11388 EXPRESSION TAG SEQADV 5GWK PRO B 1191 UNP P11388 EXPRESSION TAG SEQADV 5GWK GLY B 1192 UNP P11388 EXPRESSION TAG SEQADV 5GWK PHE B 1193 UNP P11388 EXPRESSION TAG SEQADV 5GWK SER B 1194 UNP P11388 EXPRESSION TAG SEQADV 5GWK SER B 1195 UNP P11388 EXPRESSION TAG SEQADV 5GWK ILE B 1196 UNP P11388 EXPRESSION TAG SEQADV 5GWK SER B 1197 UNP P11388 EXPRESSION TAG SEQADV 5GWK ALA B 1198 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS B 1199 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS B 1200 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS B 1201 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS B 1202 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS B 1203 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS B 1204 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS B 1205 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS B 1206 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS B 1207 UNP P11388 EXPRESSION TAG SEQADV 5GWK HIS B 1208 UNP P11388 EXPRESSION TAG SEQRES 1 A 806 MET ALA SER TRP SER HIS PRO GLN PHE GLU LYS GLY ALA SEQRES 2 A 806 ASP ASP ASP ASP LYS VAL PRO ASP PRO THR SER VAL ASP SEQRES 3 A 806 ALA VAL LYS HIS ASN ARG ILE LYS GLY ILE PRO LYS LEU SEQRES 4 A 806 ASP ASP ALA ASN ASP ALA GLY GLY ARG ASN SER THR GLU SEQRES 5 A 806 CYS THR LEU ILE LEU THR GLU GLY ASP SER ALA LYS THR SEQRES 6 A 806 LEU ALA VAL SER GLY LEU GLY VAL VAL GLY ARG ASP LYS SEQRES 7 A 806 TYR GLY VAL PHE PRO LEU ARG GLY LYS ILE LEU ASN VAL SEQRES 8 A 806 ARG GLU ALA SER HIS LYS GLN ILE MET GLU ASN ALA GLU SEQRES 9 A 806 ILE ASN ASN ILE ILE LYS ILE VAL GLY LEU GLN TYR LYS SEQRES 10 A 806 LYS ASN TYR GLU ASP GLU ASP SER LEU LYS THR LEU ARG SEQRES 11 A 806 TYR GLY LYS ILE MET ILE MET THR ASP GLN ASP GLN ASP SEQRES 12 A 806 GLY SER HIS ILE LYS GLY LEU LEU ILE ASN PHE ILE HIS SEQRES 13 A 806 HIS ASN TRP PRO SER LEU LEU ARG HIS ARG PHE LEU GLU SEQRES 14 A 806 GLU PHE ILE THR PRO ILE VAL LYS VAL SER LYS ASN LYS SEQRES 15 A 806 GLN GLU MET ALA PHE TYR SER LEU PRO GLU PHE GLU GLU SEQRES 16 A 806 TRP LYS SER SER THR PRO ASN HIS LYS LYS TRP LYS VAL SEQRES 17 A 806 LYS TYR TYR LYS GLY LEU GLY THR SER THR SER LYS GLU SEQRES 18 A 806 ALA LYS GLU TYR PHE ALA ASP MET LYS ARG HIS ARG ILE SEQRES 19 A 806 GLN PHE LYS TYR SER GLY PRO GLU ASP ASP ALA ALA ILE SEQRES 20 A 806 SER LEU ALA PHE SER LYS LYS GLN ILE ASP ASP ARG LYS SEQRES 21 A 806 GLU TRP LEU THR ASN PHE MET GLU ASP ARG ARG GLN ARG SEQRES 22 A 806 LYS LEU LEU GLY LEU PRO GLU ASP TYR LEU TYR GLY GLN SEQRES 23 A 806 THR THR THR TYR LEU THR TYR ASN ASP PHE ILE ASN LYS SEQRES 24 A 806 GLU LEU ILE LEU PHE SER ASN SER ASP ASN GLU ARG SER SEQRES 25 A 806 ILE PRO SER MET VAL ASP GLY LEU LYS PRO GLY GLN ARG SEQRES 26 A 806 LYS VAL LEU PHE THR CYS PHE LYS ARG ASN ASP LYS ARG SEQRES 27 A 806 GLU VAL LYS VAL ALA GLN LEU ALA GLY SER VAL ALA GLU SEQRES 28 A 806 MET SER SER TYR HIS HIS GLY GLU MET SER LEU MET MET SEQRES 29 A 806 THR ILE ILE ASN LEU ALA GLN ASN PHE VAL GLY SER ASN SEQRES 30 A 806 ASN LEU ASN LEU LEU GLN PRO ILE GLY GLN PHE GLY THR SEQRES 31 A 806 ARG LEU HIS GLY GLY LYS ASP SER ALA SER PRO ARG TYR SEQRES 32 A 806 ILE PHE THR MET LEU SER SER LEU ALA ARG LEU LEU PHE SEQRES 33 A 806 PRO PRO LYS ASP ASP HIS THR LEU LYS PHE LEU TYR ASP SEQRES 34 A 806 ASP ASN GLN ARG VAL GLU PRO GLU TRP TYR ILE PRO ILE SEQRES 35 A 806 ILE PRO MET VAL LEU ILE ASN GLY ALA GLU GLY ILE GLY SEQRES 36 A 806 THR GLY TRP SER CYS LYS ILE PRO ASN PHE ASP VAL ARG SEQRES 37 A 806 GLU ILE VAL ASN ASN ILE ARG ARG LEU MET ASP GLY GLU SEQRES 38 A 806 GLU PRO LEU PRO MET LEU PRO SER TYR LYS ASN PHE LYS SEQRES 39 A 806 GLY THR ILE GLU GLU LEU ALA PRO ASN GLN TYR VAL ILE SEQRES 40 A 806 SER GLY GLU VAL ALA ILE LEU ASN SER THR THR ILE GLU SEQRES 41 A 806 ILE SER GLU LEU PRO VAL ARG THR TRP THR GLN THR TYR SEQRES 42 A 806 LYS GLU GLN VAL LEU GLU PRO MET LEU ASN GLY THR GLU SEQRES 43 A 806 LYS THR PRO PRO LEU ILE THR ASP TYR ARG GLU TYR HIS SEQRES 44 A 806 THR ASP THR THR VAL LYS PHE VAL VAL LYS MET THR GLU SEQRES 45 A 806 GLU LYS LEU ALA GLU ALA GLU ARG VAL GLY LEU HIS LYS SEQRES 46 A 806 VAL PHE LYS LEU GLN THR SER LEU THR CYS ASN SER MET SEQRES 47 A 806 VAL LEU PHE ASP HIS VAL GLY CYS LEU LYS LYS TYR ASP SEQRES 48 A 806 THR VAL LEU ASP ILE LEU ARG ASP PHE PHE GLU LEU ARG SEQRES 49 A 806 LEU LYS TYR TYR GLY LEU ARG LYS GLU TRP LEU LEU GLY SEQRES 50 A 806 MET LEU GLY ALA GLU SER ALA LYS LEU ASN ASN GLN ALA SEQRES 51 A 806 ARG PHE ILE LEU GLU LYS ILE ASP GLY LYS ILE ILE ILE SEQRES 52 A 806 GLU ASN LYS PRO LYS LYS GLU LEU ILE LYS VAL LEU ILE SEQRES 53 A 806 GLN ARG GLY TYR ASP SER ASP PRO VAL LYS ALA TRP LYS SEQRES 54 A 806 GLU ALA GLN GLN LYS VAL PRO ASP GLU GLU GLU ASN GLU SEQRES 55 A 806 GLU SER ASP ASN GLU LYS GLU THR GLU LYS SER ASP SER SEQRES 56 A 806 VAL THR ASP SER GLY PRO THR PHE ASN TYR LEU LEU ASP SEQRES 57 A 806 MET PRO LEU TRP TYR LEU THR LYS GLU LYS LYS ASP GLU SEQRES 58 A 806 LEU CYS ARG LEU ARG ASN GLU LYS GLU GLN GLU LEU ASP SEQRES 59 A 806 THR LEU LYS ARG LYS SER PRO SER ASP LEU TRP LYS GLU SEQRES 60 A 806 ASP LEU ALA THR PHE ILE GLU GLU LEU GLU ALA VAL GLU SEQRES 61 A 806 ALA LYS GLU LYS GLN ASP GLY ALA PRO GLY PHE SER SER SEQRES 62 A 806 ILE SER ALA HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 1 B 806 MET ALA SER TRP SER HIS PRO GLN PHE GLU LYS GLY ALA SEQRES 2 B 806 ASP ASP ASP ASP LYS VAL PRO ASP PRO THR SER VAL ASP SEQRES 3 B 806 ALA VAL LYS HIS ASN ARG ILE LYS GLY ILE PRO LYS LEU SEQRES 4 B 806 ASP ASP ALA ASN ASP ALA GLY GLY ARG ASN SER THR GLU SEQRES 5 B 806 CYS THR LEU ILE LEU THR GLU GLY ASP SER ALA LYS THR SEQRES 6 B 806 LEU ALA VAL SER GLY LEU GLY VAL VAL GLY ARG ASP LYS SEQRES 7 B 806 TYR GLY VAL PHE PRO LEU ARG GLY LYS ILE LEU ASN VAL SEQRES 8 B 806 ARG GLU ALA SER HIS LYS GLN ILE MET GLU ASN ALA GLU SEQRES 9 B 806 ILE ASN ASN ILE ILE LYS ILE VAL GLY LEU GLN TYR LYS SEQRES 10 B 806 LYS ASN TYR GLU ASP GLU ASP SER LEU LYS THR LEU ARG SEQRES 11 B 806 TYR GLY LYS ILE MET ILE MET THR ASP GLN ASP GLN ASP SEQRES 12 B 806 GLY SER HIS ILE LYS GLY LEU LEU ILE ASN PHE ILE HIS SEQRES 13 B 806 HIS ASN TRP PRO SER LEU LEU ARG HIS ARG PHE LEU GLU SEQRES 14 B 806 GLU PHE ILE THR PRO ILE VAL LYS VAL SER LYS ASN LYS SEQRES 15 B 806 GLN GLU MET ALA PHE TYR SER LEU PRO GLU PHE GLU GLU SEQRES 16 B 806 TRP LYS SER SER THR PRO ASN HIS LYS LYS TRP LYS VAL SEQRES 17 B 806 LYS TYR TYR LYS GLY LEU GLY THR SER THR SER LYS GLU SEQRES 18 B 806 ALA LYS GLU TYR PHE ALA ASP MET LYS ARG HIS ARG ILE SEQRES 19 B 806 GLN PHE LYS TYR SER GLY PRO GLU ASP ASP ALA ALA ILE SEQRES 20 B 806 SER LEU ALA PHE SER LYS LYS GLN ILE ASP ASP ARG LYS SEQRES 21 B 806 GLU TRP LEU THR ASN PHE MET GLU ASP ARG ARG GLN ARG SEQRES 22 B 806 LYS LEU LEU GLY LEU PRO GLU ASP TYR LEU TYR GLY GLN SEQRES 23 B 806 THR THR THR TYR LEU THR TYR ASN ASP PHE ILE ASN LYS SEQRES 24 B 806 GLU LEU ILE LEU PHE SER ASN SER ASP ASN GLU ARG SER SEQRES 25 B 806 ILE PRO SER MET VAL ASP GLY LEU LYS PRO GLY GLN ARG SEQRES 26 B 806 LYS VAL LEU PHE THR CYS PHE LYS ARG ASN ASP LYS ARG SEQRES 27 B 806 GLU VAL LYS VAL ALA GLN LEU ALA GLY SER VAL ALA GLU SEQRES 28 B 806 MET SER SER TYR HIS HIS GLY GLU MET SER LEU MET MET SEQRES 29 B 806 THR ILE ILE ASN LEU ALA GLN ASN PHE VAL GLY SER ASN SEQRES 30 B 806 ASN LEU ASN LEU LEU GLN PRO ILE GLY GLN PHE GLY THR SEQRES 31 B 806 ARG LEU HIS GLY GLY LYS ASP SER ALA SER PRO ARG TYR SEQRES 32 B 806 ILE PHE THR MET LEU SER SER LEU ALA ARG LEU LEU PHE SEQRES 33 B 806 PRO PRO LYS ASP ASP HIS THR LEU LYS PHE LEU TYR ASP SEQRES 34 B 806 ASP ASN GLN ARG VAL GLU PRO GLU TRP TYR ILE PRO ILE SEQRES 35 B 806 ILE PRO MET VAL LEU ILE ASN GLY ALA GLU GLY ILE GLY SEQRES 36 B 806 THR GLY TRP SER CYS LYS ILE PRO ASN PHE ASP VAL ARG SEQRES 37 B 806 GLU ILE VAL ASN ASN ILE ARG ARG LEU MET ASP GLY GLU SEQRES 38 B 806 GLU PRO LEU PRO MET LEU PRO SER TYR LYS ASN PHE LYS SEQRES 39 B 806 GLY THR ILE GLU GLU LEU ALA PRO ASN GLN TYR VAL ILE SEQRES 40 B 806 SER GLY GLU VAL ALA ILE LEU ASN SER THR THR ILE GLU SEQRES 41 B 806 ILE SER GLU LEU PRO VAL ARG THR TRP THR GLN THR TYR SEQRES 42 B 806 LYS GLU GLN VAL LEU GLU PRO MET LEU ASN GLY THR GLU SEQRES 43 B 806 LYS THR PRO PRO LEU ILE THR ASP TYR ARG GLU TYR HIS SEQRES 44 B 806 THR ASP THR THR VAL LYS PHE VAL VAL LYS MET THR GLU SEQRES 45 B 806 GLU LYS LEU ALA GLU ALA GLU ARG VAL GLY LEU HIS LYS SEQRES 46 B 806 VAL PHE LYS LEU GLN THR SER LEU THR CYS ASN SER MET SEQRES 47 B 806 VAL LEU PHE ASP HIS VAL GLY CYS LEU LYS LYS TYR ASP SEQRES 48 B 806 THR VAL LEU ASP ILE LEU ARG ASP PHE PHE GLU LEU ARG SEQRES 49 B 806 LEU LYS TYR TYR GLY LEU ARG LYS GLU TRP LEU LEU GLY SEQRES 50 B 806 MET LEU GLY ALA GLU SER ALA LYS LEU ASN ASN GLN ALA SEQRES 51 B 806 ARG PHE ILE LEU GLU LYS ILE ASP GLY LYS ILE ILE ILE SEQRES 52 B 806 GLU ASN LYS PRO LYS LYS GLU LEU ILE LYS VAL LEU ILE SEQRES 53 B 806 GLN ARG GLY TYR ASP SER ASP PRO VAL LYS ALA TRP LYS SEQRES 54 B 806 GLU ALA GLN GLN LYS VAL PRO ASP GLU GLU GLU ASN GLU SEQRES 55 B 806 GLU SER ASP ASN GLU LYS GLU THR GLU LYS SER ASP SER SEQRES 56 B 806 VAL THR ASP SER GLY PRO THR PHE ASN TYR LEU LEU ASP SEQRES 57 B 806 MET PRO LEU TRP TYR LEU THR LYS GLU LYS LYS ASP GLU SEQRES 58 B 806 LEU CYS ARG LEU ARG ASN GLU LYS GLU GLN GLU LEU ASP SEQRES 59 B 806 THR LEU LYS ARG LYS SER PRO SER ASP LEU TRP LYS GLU SEQRES 60 B 806 ASP LEU ALA THR PHE ILE GLU GLU LEU GLU ALA VAL GLU SEQRES 61 B 806 ALA LYS GLU LYS GLN ASP GLY ALA PRO GLY PHE SER SER SEQRES 62 B 806 ILE SER ALA HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 1 C 8 DA DG DC DC DG DA DG DC SEQRES 1 D 12 DT DG DC DA DG DC DT DC DG DG DC DT SEQRES 1 E 8 DA DG DC DC DG DA DG DC SEQRES 1 F 12 DT DG DC DA DG DC DT DC DG DG DC DT HET MG A1301 1 HET MG A1302 1 HET MG B1301 1 HET MG B1302 1 HET MG D 101 1 HET EVP D 102 42 HET MG F 101 1 HET EVP F 102 42 HETNAM MG MAGNESIUM ION HETNAM EVP (5S,5AR,8AR,9R)-9-(4-HYDROXY-3,5-DIMETHOXYPHENYL)-8- HETNAM 2 EVP OXO-5,5A,6,8,8A,9-HEXAHYDROFURO[3',4':6,7]NAPHTHO[2,3- HETNAM 3 EVP D][1,3]DIOXOL -5-YL 4,6-O-[(1R)-ETHYLIDENE]-BETA-D- HETNAM 4 EVP GLUCOPYRANOSIDE HETSYN EVP ETOPOSIDE; VP-16 FORMUL 7 MG 6(MG 2+) FORMUL 12 EVP 2(C29 H32 O13) HELIX 1 AA1 GLY A 462 GLY A 474 1 13 HELIX 2 AA2 SER A 497 GLU A 503 1 7 HELIX 3 AA3 ASN A 504 GLY A 515 1 12 HELIX 4 AA4 ASP A 526 THR A 530 5 5 HELIX 5 AA5 ASP A 543 TRP A 561 1 19 HELIX 6 AA6 SER A 563 ARG A 568 5 6 HELIX 7 AA7 SER A 591 THR A 602 1 12 HELIX 8 AA8 ASN A 604 TRP A 608 5 5 HELIX 9 AA9 GLY A 615 SER A 619 5 5 HELIX 10 AB1 THR A 620 ASP A 630 1 11 HELIX 11 AB2 ASP A 630 HIS A 634 1 5 HELIX 12 AB3 GLY A 642 SER A 654 1 13 HELIX 13 AB4 GLN A 657 LEU A 678 1 22 HELIX 14 AB5 TYR A 695 GLU A 702 1 8 HELIX 15 AB6 GLU A 702 ILE A 715 1 14 HELIX 16 AB7 LYS A 723 ASN A 737 1 15 HELIX 17 AB8 VAL A 744 SER A 755 1 12 HELIX 18 AB9 GLY A 760 GLN A 773 1 14 HELIX 19 AC1 LEU A 813 PHE A 818 1 6 HELIX 20 AC2 PRO A 819 LEU A 826 5 8 HELIX 21 AC3 PRO A 846 ASN A 851 1 6 HELIX 22 AC4 ASP A 868 ASP A 881 1 14 HELIX 23 AC5 TRP A 931 VAL A 939 1 9 HELIX 24 AC6 VAL A 939 ASN A 945 1 7 HELIX 25 AC7 THR A 973 GLY A 984 1 12 HELIX 26 AC8 GLY A 984 PHE A 989 1 6 HELIX 27 AC9 THR A 1014 ASP A 1060 1 47 HELIX 28 AD1 PRO A 1069 ARG A 1080 1 12 HELIX 29 AD2 ASP A 1085 ALA A 1093 1 9 HELIX 30 AD3 PHE A 1125 ASP A 1130 1 6 HELIX 31 AD4 PRO A 1132 LEU A 1136 5 5 HELIX 32 AD5 THR A 1137 ARG A 1160 1 24 HELIX 33 AD6 SER A 1162 GLN A 1187 1 26 HELIX 34 AD7 GLY B 462 GLY B 474 1 13 HELIX 35 AD8 SER B 497 GLU B 503 1 7 HELIX 36 AD9 ASN B 504 GLY B 515 1 12 HELIX 37 AE1 ASP B 526 THR B 530 5 5 HELIX 38 AE2 ASP B 543 TRP B 561 1 19 HELIX 39 AE3 TRP B 561 ARG B 566 1 6 HELIX 40 AE4 SER B 591 THR B 602 1 12 HELIX 41 AE5 ASN B 604 TRP B 608 5 5 HELIX 42 AE6 THR B 620 ASP B 630 1 11 HELIX 43 AE7 ASP B 630 HIS B 634 1 5 HELIX 44 AE8 GLY B 642 SER B 654 1 13 HELIX 45 AE9 GLN B 657 LEU B 678 1 22 HELIX 46 AF1 TYR B 695 GLU B 702 1 8 HELIX 47 AF2 GLU B 702 ILE B 715 1 14 HELIX 48 AF3 LYS B 723 ASN B 737 1 15 HELIX 49 AF4 VAL B 744 SER B 755 1 12 HELIX 50 AF5 GLY B 760 GLN B 773 1 14 HELIX 51 AF6 LEU B 813 PHE B 818 1 6 HELIX 52 AF7 PRO B 819 LEU B 826 5 8 HELIX 53 AF8 PRO B 846 ILE B 850 5 5 HELIX 54 AF9 ASP B 868 ASP B 881 1 14 HELIX 55 AG1 TRP B 931 VAL B 939 1 9 HELIX 56 AG2 VAL B 939 ASN B 945 1 7 HELIX 57 AG3 THR B 973 GLY B 984 1 12 HELIX 58 AG4 GLY B 984 PHE B 989 1 6 HELIX 59 AG5 THR B 1014 ASP B 1060 1 47 HELIX 60 AG6 PRO B 1069 ARG B 1080 1 12 HELIX 61 AG7 ASP B 1085 ALA B 1093 1 9 HELIX 62 AG8 PHE B 1125 ASP B 1130 1 6 HELIX 63 AG9 PRO B 1132 LEU B 1136 5 5 HELIX 64 AH1 THR B 1137 ARG B 1160 1 24 HELIX 65 AH2 SER B 1162 GLN B 1187 1 26 SHEET 1 AA1 6 TYR A 481 LEU A 486 0 SHEET 2 AA1 6 THR A 456 GLU A 461 1 N ILE A 458 O GLY A 482 SHEET 3 AA1 6 LYS A 535 MET A 539 1 O LYS A 535 N LEU A 457 SHEET 4 AA1 6 LEU A 570 PHE A 573 1 O GLU A 571 N ILE A 538 SHEET 5 AA1 6 ARG A 635 LYS A 639 -1 O ILE A 636 N GLU A 572 SHEET 6 AA1 6 TYR A 692 THR A 694 1 O LEU A 693 N LYS A 639 SHEET 1 AA2 3 GLU A 586 PHE A 589 0 SHEET 2 AA2 3 VAL A 578 SER A 581 -1 N VAL A 578 O PHE A 589 SHEET 3 AA2 3 LYS A 609 TYR A 612 -1 O LYS A 609 N SER A 581 SHEET 1 AA3 2 VAL A 742 LYS A 743 0 SHEET 2 AA3 2 PHE A 807 THR A 808 -1 O THR A 808 N VAL A 742 SHEET 1 AA4 2 PHE A 828 ASP A 831 0 SHEET 2 AA4 2 GLN A 834 PRO A 838 -1 O GLN A 834 N ASP A 831 SHEET 1 AA5 2 ALA A 853 ILE A 856 0 SHEET 2 AA5 2 SER A 861 ILE A 864 -1 O CYS A 862 N GLY A 855 SHEET 1 AA6 3 THR A 898 GLU A 901 0 SHEET 2 AA6 3 GLN A 906 SER A 910 -1 O VAL A 908 N GLU A 900 SHEET 3 AA6 3 GLN A 992 THR A 996 -1 O LEU A 995 N TYR A 907 SHEET 1 AA7 4 GLU A 912 ILE A 915 0 SHEET 2 AA7 4 THR A 920 GLU A 925 -1 O GLU A 922 N ALA A 914 SHEET 3 AA7 4 PHE A 968 LYS A 971 -1 O PHE A 968 N ILE A 923 SHEET 4 AA7 4 ASP A 956 GLU A 959 -1 N ASP A 956 O LYS A 971 SHEET 1 AA8 2 VAL A1001 PHE A1003 0 SHEET 2 AA8 2 LEU A1009 LYS A1011 -1 O LYS A1010 N LEU A1002 SHEET 1 AA9 6 TYR B 481 LEU B 486 0 SHEET 2 AA9 6 THR B 456 GLU B 461 1 N ILE B 458 O GLY B 482 SHEET 3 AA9 6 LYS B 535 MET B 539 1 O LYS B 535 N LEU B 457 SHEET 4 AA9 6 LEU B 570 PHE B 573 1 O GLU B 571 N ILE B 538 SHEET 5 AA9 6 ARG B 635 LYS B 639 -1 O ILE B 636 N GLU B 572 SHEET 6 AA9 6 TYR B 692 THR B 694 1 O LEU B 693 N LYS B 639 SHEET 1 AB1 3 GLU B 586 PHE B 589 0 SHEET 2 AB1 3 VAL B 578 SER B 581 -1 N VAL B 578 O PHE B 589 SHEET 3 AB1 3 LYS B 609 TYR B 612 -1 O LYS B 609 N SER B 581 SHEET 1 AB2 3 VAL B 742 LYS B 743 0 SHEET 2 AB2 3 PHE B 807 LEU B 810 -1 O THR B 808 N VAL B 742 SHEET 3 AB2 3 LEU B 784 ILE B 787 -1 N GLN B 785 O MET B 809 SHEET 1 AB3 2 PHE B 828 ASP B 831 0 SHEET 2 AB3 2 GLN B 834 PRO B 838 -1 O GLN B 834 N ASP B 831 SHEET 1 AB4 2 ALA B 853 ILE B 856 0 SHEET 2 AB4 2 SER B 861 ILE B 864 -1 O ILE B 864 N ALA B 853 SHEET 1 AB5 3 THR B 898 GLU B 901 0 SHEET 2 AB5 3 GLN B 906 SER B 910 -1 O VAL B 908 N GLU B 900 SHEET 3 AB5 3 GLN B 992 THR B 996 -1 O LEU B 995 N TYR B 907 SHEET 1 AB6 4 GLU B 912 ILE B 915 0 SHEET 2 AB6 4 THR B 920 GLU B 925 -1 O GLU B 922 N ALA B 914 SHEET 3 AB6 4 PHE B 968 LYS B 971 -1 O PHE B 968 N ILE B 923 SHEET 4 AB6 4 ASP B 956 GLU B 959 -1 N ASP B 956 O LYS B 971 SHEET 1 AB7 2 VAL B1001 PHE B1003 0 SHEET 2 AB7 2 LEU B1009 LYS B1011 -1 O LYS B1010 N LEU B1002 LINK OH TYR A 805 P DT F 9 1555 1555 1.63 LINK OH TYR B 805 P DT D 9 1555 1555 1.63 LINK OD2 ASP A 541 MG MG A1301 1555 1555 2.21 LINK OD2 ASP A 543 MG MG A1301 1555 1555 2.20 LINK OD2 ASP B 541 MG MG B1301 1555 1555 2.20 LINK OD2 ASP B 543 MG MG B1301 1555 1555 2.20 CISPEP 1 GLY A 474 VAL A 475 0 -2.62 CISPEP 2 GLY B 474 VAL B 475 0 -3.16 SITE 1 AC1 2 ASP A 541 ASP A 543 SITE 1 AC2 3 ASN A 851 GLU A 854 ARG A 929 SITE 1 AC3 2 ASP B 541 ASP B 543 SITE 1 AC4 2 ASN B 851 ARG B 929 SITE 1 AC5 1 DG D 17 SITE 1 AC6 9 GLY B 462 ASP B 463 ARG B 487 MET B 766 SITE 2 AC6 9 DA D 12 DG D 13 DC E 8 DT F 9 SITE 3 AC6 9 DG F 10 SITE 1 AC7 1 DG F 17 SITE 1 AC8 10 GLY A 462 ASP A 463 ARG A 487 MET A 762 SITE 2 AC8 10 MET A 766 DC C 8 DT D 9 DG D 10 SITE 3 AC8 10 DA F 12 DG F 13 CRYST1 105.113 126.155 198.856 90.00 90.00 90.00 P 21 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009514 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007927 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005029 0.00000