HEADER HYDROLASE 02-OCT-16 5GZY TITLE THE COMPLEX STRUCTURE OF D-2-HALOACID DEHALOGENASE WITH L-LA COMPND MOL_ID: 1; COMPND 2 MOLECULE: (R)-2-HALOACID DEHALOGENASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: D-2-HALOACID DEHALOGENASE,D-DEX; COMPND 5 EC: 3.8.1.9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 303; SOURCE 4 GENE: HADD; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS DEHALOGENATION, D-2-HALOACID DEHALOGENASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.WANG,S.XUE REVDAT 3 15-NOV-23 5GZY 1 REMARK REVDAT 2 08-NOV-23 5GZY 1 REMARK REVDAT 1 04-OCT-17 5GZY 0 JRNL AUTH Y.WANG,S.XUE JRNL TITL THE COMPLEX STRUCTURE OF D-2-HALOACID DEHALOGENASE WITH L-LA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 76721 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 3847 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.5793 - 6.5307 0.99 2761 153 0.1456 0.1655 REMARK 3 2 6.5307 - 5.1856 1.00 2746 134 0.1677 0.1959 REMARK 3 3 5.1856 - 4.5307 1.00 2721 149 0.1422 0.1630 REMARK 3 4 4.5307 - 4.1167 1.00 2730 169 0.1331 0.1552 REMARK 3 5 4.1167 - 3.8218 1.00 2725 134 0.1482 0.1896 REMARK 3 6 3.8218 - 3.5965 1.00 2707 151 0.1366 0.1664 REMARK 3 7 3.5965 - 3.4165 1.00 2738 145 0.1438 0.1896 REMARK 3 8 3.4165 - 3.2678 1.00 2731 133 0.1515 0.1865 REMARK 3 9 3.2678 - 3.1420 1.00 2708 130 0.1596 0.1981 REMARK 3 10 3.1420 - 3.0336 1.00 2701 148 0.1624 0.1971 REMARK 3 11 3.0336 - 2.9388 1.00 2717 152 0.1661 0.1971 REMARK 3 12 2.9388 - 2.8548 1.00 2699 148 0.1631 0.2115 REMARK 3 13 2.8548 - 2.7796 1.00 2705 136 0.1676 0.1965 REMARK 3 14 2.7796 - 2.7118 1.00 2710 133 0.1640 0.2034 REMARK 3 15 2.7118 - 2.6502 1.00 2712 164 0.1607 0.2032 REMARK 3 16 2.6502 - 2.5938 1.00 2688 144 0.1672 0.2305 REMARK 3 17 2.5938 - 2.5419 1.00 2685 143 0.1684 0.2354 REMARK 3 18 2.5419 - 2.4939 1.00 2696 147 0.1677 0.2235 REMARK 3 19 2.4939 - 2.4494 1.00 2716 126 0.1845 0.2457 REMARK 3 20 2.4494 - 2.4079 1.00 2745 142 0.1729 0.2132 REMARK 3 21 2.4079 - 2.3690 1.00 2694 132 0.1673 0.2276 REMARK 3 22 2.3690 - 2.3326 1.00 2730 144 0.1662 0.1800 REMARK 3 23 2.3326 - 2.2983 1.00 2688 154 0.1698 0.2122 REMARK 3 24 2.2983 - 2.2659 1.00 2663 142 0.1716 0.2439 REMARK 3 25 2.2659 - 2.2353 1.00 2739 150 0.1756 0.2486 REMARK 3 26 2.2353 - 2.2063 1.00 2706 122 0.1834 0.2390 REMARK 3 27 2.2063 - 2.1787 0.86 2313 122 0.1849 0.2799 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 9566 REMARK 3 ANGLE : 1.030 12992 REMARK 3 CHIRALITY : 0.040 1398 REMARK 3 PLANARITY : 0.006 1698 REMARK 3 DIHEDRAL : 13.246 3500 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5GZY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1300001752. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97776 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76730 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.180 REMARK 200 RESOLUTION RANGE LOW (A) : 47.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: COOT 0.8.2 REMARK 200 STARTING MODEL: 3BJX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MES, PEG 20000, PEG 8000, POTASSIUM REMARK 280 SODIUM TARTRATE TETRAHYDRATE, D-2-CHLOROPROPIONATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.56800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 LEU A 3 REMARK 465 PRO A 4 REMARK 465 ASP A 5 REMARK 465 ASN A 6 REMARK 465 SER A 7 REMARK 465 LYS A 301 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 LEU B 3 REMARK 465 PRO B 4 REMARK 465 ASP B 5 REMARK 465 ASN B 6 REMARK 465 SER B 7 REMARK 465 ILE B 8 REMARK 465 HIS B 9 REMARK 465 LYS B 301 REMARK 465 MET C 1 REMARK 465 ASN C 2 REMARK 465 LEU C 3 REMARK 465 PRO C 4 REMARK 465 ASP C 5 REMARK 465 ASN C 6 REMARK 465 SER C 7 REMARK 465 ILE C 8 REMARK 465 HIS C 9 REMARK 465 LYS C 301 REMARK 465 MET D 1 REMARK 465 ASN D 2 REMARK 465 LEU D 3 REMARK 465 PRO D 4 REMARK 465 ASP D 5 REMARK 465 ASN D 6 REMARK 465 SER D 7 REMARK 465 LYS D 301 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 649 O HOH A 694 1.81 REMARK 500 O HOH C 642 O HOH D 713 1.83 REMARK 500 SD MET C 209 O HOH C 772 1.85 REMARK 500 O HOH A 840 O HOH A 848 1.85 REMARK 500 O HOH C 750 O HOH C 757 1.88 REMARK 500 O HOH D 560 O HOH D 807 1.88 REMARK 500 NE2 GLN C 198 O HOH C 501 1.89 REMARK 500 O HOH A 860 O HOH A 864 1.90 REMARK 500 O HOH B 511 O HOH B 753 1.90 REMARK 500 O ASP C 171 O HOH C 502 1.91 REMARK 500 NE ARG B 258 O HOH B 501 1.93 REMARK 500 O HOH B 532 O HOH B 783 1.94 REMARK 500 O HOH A 564 O HOH A 849 1.96 REMARK 500 O HOH D 808 O HOH D 821 1.97 REMARK 500 O HOH A 772 O HOH A 840 1.99 REMARK 500 O HOH B 695 O HOH B 819 2.00 REMARK 500 O GLY D 183 O HOH D 501 2.00 REMARK 500 O HOH D 681 O HOH D 805 2.00 REMARK 500 OE2 GLU C 179 O HOH C 503 2.00 REMARK 500 O HOH A 516 O HOH A 801 2.01 REMARK 500 O HOH A 719 O HOH A 871 2.01 REMARK 500 NH2 ARG A 115 O HOH A 501 2.02 REMARK 500 O HOH A 695 O HOH A 770 2.02 REMARK 500 O HOH D 764 O HOH D 777 2.03 REMARK 500 NH2 ARG D 115 O HOH D 502 2.03 REMARK 500 O GLY A 102 O HOH A 502 2.04 REMARK 500 O HOH A 747 O HOH A 781 2.04 REMARK 500 O HOH A 787 O HOH D 764 2.04 REMARK 500 O HOH A 541 O HOH A 793 2.04 REMARK 500 O HOH D 590 O HOH D 593 2.05 REMARK 500 O HOH B 720 O HOH B 813 2.07 REMARK 500 O HOH D 752 O HOH D 771 2.07 REMARK 500 O HOH B 636 O HOH B 820 2.08 REMARK 500 OE1 GLU D 179 O HOH D 503 2.08 REMARK 500 O HOH B 679 O HOH B 752 2.08 REMARK 500 O HOH B 824 O HOH B 830 2.08 REMARK 500 O HOH A 574 O HOH A 837 2.10 REMARK 500 O HOH A 710 O HOH A 747 2.10 REMARK 500 O HOH B 843 O HOH B 868 2.10 REMARK 500 O HOH B 628 O HOH B 631 2.11 REMARK 500 SG CYS B 168 O HOH B 661 2.11 REMARK 500 O HOH B 686 O HOH B 811 2.11 REMARK 500 O HOH B 502 O HOH B 808 2.11 REMARK 500 O HOH A 744 O HOH A 813 2.12 REMARK 500 SG CYS C 160 O HOH C 806 2.12 REMARK 500 O HOH B 612 O HOH B 835 2.13 REMARK 500 O HOH A 520 O HOH A 722 2.13 REMARK 500 O LEU B 300 O HOH B 502 2.13 REMARK 500 O HOH B 817 O HOH C 728 2.13 REMARK 500 O HOH C 707 O HOH C 789 2.13 REMARK 500 REMARK 500 THIS ENTRY HAS 74 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 807 O HOH B 626 2445 1.98 REMARK 500 O HOH B 857 O HOH D 851 2445 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 155 75.03 49.91 REMARK 500 MET A 256 85.29 -158.73 REMARK 500 MET B 256 83.03 -159.18 REMARK 500 MET C 256 83.36 -156.87 REMARK 500 MET D 256 84.98 -156.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 912 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A 913 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A 914 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH A 915 DISTANCE = 7.79 ANGSTROMS REMARK 525 HOH B 873 DISTANCE = 6.73 ANGSTROMS REMARK 525 HOH C 852 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH C 853 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH D 863 DISTANCE = 5.92 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2OP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2OP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2OP C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2OP D 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5GZX RELATED DB: PDB REMARK 900 RELATED ID: 5H00 RELATED DB: PDB REMARK 900 RELATED ID: 5H01 RELATED DB: PDB DBREF 5GZY A 1 301 UNP Q52086 HADD_PSEPU 1 301 DBREF 5GZY B 1 301 UNP Q52086 HADD_PSEPU 1 301 DBREF 5GZY C 1 301 UNP Q52086 HADD_PSEPU 1 301 DBREF 5GZY D 1 301 UNP Q52086 HADD_PSEPU 1 301 SEQRES 1 A 301 MET ASN LEU PRO ASP ASN SER ILE HIS LEU GLN LEU PRO SEQRES 2 A 301 ARG PRO VAL CYS GLU ALA ILE ILE ARG PRO VAL PRO GLU SEQRES 3 A 301 HIS ARG ALA ASP GLN GLU LEU SER GLU ILE TYR ARG ASP SEQRES 4 A 301 LEU LYS ALA THR PHE GLY VAL PRO TRP VAL GLY VAL ILE SEQRES 5 A 301 THR GLN ALA VAL ALA TYR TYR ARG PRO PHE PHE ALA GLU SEQRES 6 A 301 ALA TRP ARG ARG PHE ALA PRO SER ALA LYS THR HIS PHE SEQRES 7 A 301 PHE GLU ARG ALA SER ASP ASP ILE ARG ILE ARG SER TRP SEQRES 8 A 301 GLU LEU MET GLY GLN SER PHE VAL ILE GLU GLY GLN THR SEQRES 9 A 301 ASP ARG LEU ARG GLU MET GLY TYR SER VAL ARG GLU ILE SEQRES 10 A 301 GLY GLN ILE ARG ALA VAL LEU ASP ILE PHE ASP TYR GLY SEQRES 11 A 301 ASN PRO LYS TYR LEU ILE PHE ALA THR ALA ILE LYS GLU SEQRES 12 A 301 GLY LEU LEU SER GLY ARG THR PHE GLY GLY ALA ALA GLY SEQRES 13 A 301 ASP ALA ARG CYS HIS PHE PRO ARG SER PRO ILE CYS GLN SEQRES 14 A 301 ILE ASP PRO ILE PRO VAL MET VAL GLU GLU HIS HIS ALA SEQRES 15 A 301 GLY GLY THR LEU SER GLN VAL TYR ALA ASP ILE LYS GLN SEQRES 16 A 301 THR LEU GLN LEU PRO PHE ILE ASN SER ASP TYR LYS ALA SEQRES 17 A 301 MET ALA ARG TRP PRO SER TYR LEU GLU GLN ALA TRP GLY SEQRES 18 A 301 ALA LEU LYS PRO CYS ILE ASP THR PRO ALA TYR GLN ALA SEQRES 19 A 301 GLY ARG PHE ASP ILE ASN ALA ARG ALA LEU ALA ALA LEU SEQRES 20 A 301 ASP ALA LEU PRO THR ALA TYR ARG MET SER ARG ASP ASP SEQRES 21 A 301 ALA LEU GLN ALA GLY LEU SER GLU ALA GLN THR ASP GLU SEQRES 22 A 301 LEU ILE GLN VAL ILE SER LEU PHE GLN TRP MET LEU SER SEQRES 23 A 301 GLY LEU VAL LEU ASN VAL THR HIS PHE LYS GLN GLN ALA SEQRES 24 A 301 LEU LYS SEQRES 1 B 301 MET ASN LEU PRO ASP ASN SER ILE HIS LEU GLN LEU PRO SEQRES 2 B 301 ARG PRO VAL CYS GLU ALA ILE ILE ARG PRO VAL PRO GLU SEQRES 3 B 301 HIS ARG ALA ASP GLN GLU LEU SER GLU ILE TYR ARG ASP SEQRES 4 B 301 LEU LYS ALA THR PHE GLY VAL PRO TRP VAL GLY VAL ILE SEQRES 5 B 301 THR GLN ALA VAL ALA TYR TYR ARG PRO PHE PHE ALA GLU SEQRES 6 B 301 ALA TRP ARG ARG PHE ALA PRO SER ALA LYS THR HIS PHE SEQRES 7 B 301 PHE GLU ARG ALA SER ASP ASP ILE ARG ILE ARG SER TRP SEQRES 8 B 301 GLU LEU MET GLY GLN SER PHE VAL ILE GLU GLY GLN THR SEQRES 9 B 301 ASP ARG LEU ARG GLU MET GLY TYR SER VAL ARG GLU ILE SEQRES 10 B 301 GLY GLN ILE ARG ALA VAL LEU ASP ILE PHE ASP TYR GLY SEQRES 11 B 301 ASN PRO LYS TYR LEU ILE PHE ALA THR ALA ILE LYS GLU SEQRES 12 B 301 GLY LEU LEU SER GLY ARG THR PHE GLY GLY ALA ALA GLY SEQRES 13 B 301 ASP ALA ARG CYS HIS PHE PRO ARG SER PRO ILE CYS GLN SEQRES 14 B 301 ILE ASP PRO ILE PRO VAL MET VAL GLU GLU HIS HIS ALA SEQRES 15 B 301 GLY GLY THR LEU SER GLN VAL TYR ALA ASP ILE LYS GLN SEQRES 16 B 301 THR LEU GLN LEU PRO PHE ILE ASN SER ASP TYR LYS ALA SEQRES 17 B 301 MET ALA ARG TRP PRO SER TYR LEU GLU GLN ALA TRP GLY SEQRES 18 B 301 ALA LEU LYS PRO CYS ILE ASP THR PRO ALA TYR GLN ALA SEQRES 19 B 301 GLY ARG PHE ASP ILE ASN ALA ARG ALA LEU ALA ALA LEU SEQRES 20 B 301 ASP ALA LEU PRO THR ALA TYR ARG MET SER ARG ASP ASP SEQRES 21 B 301 ALA LEU GLN ALA GLY LEU SER GLU ALA GLN THR ASP GLU SEQRES 22 B 301 LEU ILE GLN VAL ILE SER LEU PHE GLN TRP MET LEU SER SEQRES 23 B 301 GLY LEU VAL LEU ASN VAL THR HIS PHE LYS GLN GLN ALA SEQRES 24 B 301 LEU LYS SEQRES 1 C 301 MET ASN LEU PRO ASP ASN SER ILE HIS LEU GLN LEU PRO SEQRES 2 C 301 ARG PRO VAL CYS GLU ALA ILE ILE ARG PRO VAL PRO GLU SEQRES 3 C 301 HIS ARG ALA ASP GLN GLU LEU SER GLU ILE TYR ARG ASP SEQRES 4 C 301 LEU LYS ALA THR PHE GLY VAL PRO TRP VAL GLY VAL ILE SEQRES 5 C 301 THR GLN ALA VAL ALA TYR TYR ARG PRO PHE PHE ALA GLU SEQRES 6 C 301 ALA TRP ARG ARG PHE ALA PRO SER ALA LYS THR HIS PHE SEQRES 7 C 301 PHE GLU ARG ALA SER ASP ASP ILE ARG ILE ARG SER TRP SEQRES 8 C 301 GLU LEU MET GLY GLN SER PHE VAL ILE GLU GLY GLN THR SEQRES 9 C 301 ASP ARG LEU ARG GLU MET GLY TYR SER VAL ARG GLU ILE SEQRES 10 C 301 GLY GLN ILE ARG ALA VAL LEU ASP ILE PHE ASP TYR GLY SEQRES 11 C 301 ASN PRO LYS TYR LEU ILE PHE ALA THR ALA ILE LYS GLU SEQRES 12 C 301 GLY LEU LEU SER GLY ARG THR PHE GLY GLY ALA ALA GLY SEQRES 13 C 301 ASP ALA ARG CYS HIS PHE PRO ARG SER PRO ILE CYS GLN SEQRES 14 C 301 ILE ASP PRO ILE PRO VAL MET VAL GLU GLU HIS HIS ALA SEQRES 15 C 301 GLY GLY THR LEU SER GLN VAL TYR ALA ASP ILE LYS GLN SEQRES 16 C 301 THR LEU GLN LEU PRO PHE ILE ASN SER ASP TYR LYS ALA SEQRES 17 C 301 MET ALA ARG TRP PRO SER TYR LEU GLU GLN ALA TRP GLY SEQRES 18 C 301 ALA LEU LYS PRO CYS ILE ASP THR PRO ALA TYR GLN ALA SEQRES 19 C 301 GLY ARG PHE ASP ILE ASN ALA ARG ALA LEU ALA ALA LEU SEQRES 20 C 301 ASP ALA LEU PRO THR ALA TYR ARG MET SER ARG ASP ASP SEQRES 21 C 301 ALA LEU GLN ALA GLY LEU SER GLU ALA GLN THR ASP GLU SEQRES 22 C 301 LEU ILE GLN VAL ILE SER LEU PHE GLN TRP MET LEU SER SEQRES 23 C 301 GLY LEU VAL LEU ASN VAL THR HIS PHE LYS GLN GLN ALA SEQRES 24 C 301 LEU LYS SEQRES 1 D 301 MET ASN LEU PRO ASP ASN SER ILE HIS LEU GLN LEU PRO SEQRES 2 D 301 ARG PRO VAL CYS GLU ALA ILE ILE ARG PRO VAL PRO GLU SEQRES 3 D 301 HIS ARG ALA ASP GLN GLU LEU SER GLU ILE TYR ARG ASP SEQRES 4 D 301 LEU LYS ALA THR PHE GLY VAL PRO TRP VAL GLY VAL ILE SEQRES 5 D 301 THR GLN ALA VAL ALA TYR TYR ARG PRO PHE PHE ALA GLU SEQRES 6 D 301 ALA TRP ARG ARG PHE ALA PRO SER ALA LYS THR HIS PHE SEQRES 7 D 301 PHE GLU ARG ALA SER ASP ASP ILE ARG ILE ARG SER TRP SEQRES 8 D 301 GLU LEU MET GLY GLN SER PHE VAL ILE GLU GLY GLN THR SEQRES 9 D 301 ASP ARG LEU ARG GLU MET GLY TYR SER VAL ARG GLU ILE SEQRES 10 D 301 GLY GLN ILE ARG ALA VAL LEU ASP ILE PHE ASP TYR GLY SEQRES 11 D 301 ASN PRO LYS TYR LEU ILE PHE ALA THR ALA ILE LYS GLU SEQRES 12 D 301 GLY LEU LEU SER GLY ARG THR PHE GLY GLY ALA ALA GLY SEQRES 13 D 301 ASP ALA ARG CYS HIS PHE PRO ARG SER PRO ILE CYS GLN SEQRES 14 D 301 ILE ASP PRO ILE PRO VAL MET VAL GLU GLU HIS HIS ALA SEQRES 15 D 301 GLY GLY THR LEU SER GLN VAL TYR ALA ASP ILE LYS GLN SEQRES 16 D 301 THR LEU GLN LEU PRO PHE ILE ASN SER ASP TYR LYS ALA SEQRES 17 D 301 MET ALA ARG TRP PRO SER TYR LEU GLU GLN ALA TRP GLY SEQRES 18 D 301 ALA LEU LYS PRO CYS ILE ASP THR PRO ALA TYR GLN ALA SEQRES 19 D 301 GLY ARG PHE ASP ILE ASN ALA ARG ALA LEU ALA ALA LEU SEQRES 20 D 301 ASP ALA LEU PRO THR ALA TYR ARG MET SER ARG ASP ASP SEQRES 21 D 301 ALA LEU GLN ALA GLY LEU SER GLU ALA GLN THR ASP GLU SEQRES 22 D 301 LEU ILE GLN VAL ILE SER LEU PHE GLN TRP MET LEU SER SEQRES 23 D 301 GLY LEU VAL LEU ASN VAL THR HIS PHE LYS GLN GLN ALA SEQRES 24 D 301 LEU LYS HET 2OP A 401 6 HET 2OP B 401 6 HET 2OP C 401 6 HET 2OP D 401 6 HETNAM 2OP (2S)-2-HYDROXYPROPANOIC ACID FORMUL 5 2OP 4(C3 H6 O3) FORMUL 9 HOH *1504(H2 O) HELIX 1 AA1 ASP A 30 GLY A 45 1 16 HELIX 2 AA2 GLY A 50 ALA A 57 1 8 HELIX 3 AA3 TYR A 59 LYS A 75 1 17 HELIX 4 AA4 THR A 76 PHE A 98 1 23 HELIX 5 AA5 GLN A 103 GLY A 111 1 9 HELIX 6 AA6 SER A 113 GLY A 148 1 36 HELIX 7 AA7 ASP A 157 PHE A 162 5 6 HELIX 8 AA8 GLY A 183 GLN A 198 1 16 HELIX 9 AA9 ASN A 203 ALA A 210 1 8 HELIX 10 AB1 TRP A 212 LYS A 224 1 13 HELIX 11 AB2 PRO A 225 ILE A 227 5 3 HELIX 12 AB3 THR A 229 ALA A 249 1 21 HELIX 13 AB4 SER A 257 GLY A 265 1 9 HELIX 14 AB5 SER A 267 ALA A 299 1 33 HELIX 15 AB6 ASP B 30 GLY B 45 1 16 HELIX 16 AB7 GLY B 50 ALA B 57 1 8 HELIX 17 AB8 TYR B 59 LYS B 75 1 17 HELIX 18 AB9 THR B 76 PHE B 98 1 23 HELIX 19 AC1 GLN B 103 MET B 110 1 8 HELIX 20 AC2 SER B 113 GLY B 148 1 36 HELIX 21 AC3 ASP B 157 PHE B 162 5 6 HELIX 22 AC4 GLY B 183 GLN B 198 1 16 HELIX 23 AC5 ASN B 203 ALA B 210 1 8 HELIX 24 AC6 TRP B 212 LYS B 224 1 13 HELIX 25 AC7 PRO B 225 ILE B 227 5 3 HELIX 26 AC8 THR B 229 ALA B 249 1 21 HELIX 27 AC9 SER B 257 GLY B 265 1 9 HELIX 28 AD1 SER B 267 ALA B 299 1 33 HELIX 29 AD2 ASP C 30 GLY C 45 1 16 HELIX 30 AD3 GLY C 50 ALA C 57 1 8 HELIX 31 AD4 TYR C 59 LYS C 75 1 17 HELIX 32 AD5 THR C 76 PHE C 98 1 23 HELIX 33 AD6 GLN C 103 MET C 110 1 8 HELIX 34 AD7 SER C 113 GLY C 148 1 36 HELIX 35 AD8 ASP C 157 PHE C 162 5 6 HELIX 36 AD9 GLY C 183 GLN C 198 1 16 HELIX 37 AE1 ASN C 203 ALA C 210 1 8 HELIX 38 AE2 TRP C 212 LYS C 224 1 13 HELIX 39 AE3 PRO C 225 ILE C 227 5 3 HELIX 40 AE4 THR C 229 ALA C 249 1 21 HELIX 41 AE5 SER C 257 GLY C 265 1 9 HELIX 42 AE6 SER C 267 ALA C 299 1 33 HELIX 43 AE7 ASP D 30 GLY D 45 1 16 HELIX 44 AE8 GLY D 50 ALA D 57 1 8 HELIX 45 AE9 TYR D 59 LYS D 75 1 17 HELIX 46 AF1 THR D 76 PHE D 98 1 23 HELIX 47 AF2 GLN D 103 MET D 110 1 8 HELIX 48 AF3 SER D 113 GLY D 148 1 36 HELIX 49 AF4 ASP D 157 PHE D 162 5 6 HELIX 50 AF5 GLY D 184 GLN D 198 1 15 HELIX 51 AF6 ASN D 203 ALA D 210 1 8 HELIX 52 AF7 TRP D 212 LYS D 224 1 13 HELIX 53 AF8 PRO D 225 ILE D 227 5 3 HELIX 54 AF9 THR D 229 ALA D 249 1 21 HELIX 55 AG1 SER D 257 GLY D 265 1 9 HELIX 56 AG2 SER D 267 ALA D 299 1 33 CISPEP 1 ASP A 171 PRO A 172 0 -8.25 CISPEP 2 ASP B 171 PRO B 172 0 -9.10 CISPEP 3 ASP D 171 PRO D 172 0 -6.34 SITE 1 AC1 9 TRP A 48 GLY A 50 VAL A 51 ILE A 52 SITE 2 AC1 9 ASN A 203 SER A 204 ASP A 205 MET A 284 SITE 3 AC1 9 HOH A 515 SITE 1 AC2 8 TRP B 48 GLY B 50 VAL B 51 ILE B 52 SITE 2 AC2 8 ASN B 203 SER B 204 ASP B 205 HOH B 521 SITE 1 AC3 9 TRP C 48 GLY C 50 VAL C 51 ILE C 52 SITE 2 AC3 9 ASN C 203 SER C 204 ASP C 205 MET C 284 SITE 3 AC3 9 HOH C 520 SITE 1 AC4 9 TRP D 48 GLY D 50 VAL D 51 ILE D 52 SITE 2 AC4 9 ASN D 131 ASN D 203 SER D 204 ASP D 205 SITE 3 AC4 9 MET D 284 CRYST1 72.945 95.136 109.058 90.00 98.09 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013709 0.000000 0.001949 0.00000 SCALE2 0.000000 0.010511 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009262 0.00000