HEADER HYDROLASE 30-DEC-15 5HAR TITLE OXA-163 BETA-LACTAMASE - S70G MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 25-261; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTER CLOACAE; SOURCE 3 ORGANISM_TAXID: 550; SOURCE 4 GENE: BLAOXA-163; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET29A KEYWDS HYDROLASE, SERINE BETA-LACTAMASE EXPDTA X-RAY DIFFRACTION AUTHOR V.STOJANOSKI,C.J.ADAMSKI,L.HU,S.C.MEHTA,B.SANKARAN,B.V.V.PRASAD, AUTHOR 2 T.G.PALZKILL REVDAT 5 15-NOV-23 5HAR 1 REMARK REVDAT 4 27-SEP-23 5HAR 1 REMARK REVDAT 3 11-DEC-19 5HAR 1 REMARK REVDAT 2 13-SEP-17 5HAR 1 JRNL REMARK REVDAT 1 07-SEP-16 5HAR 0 JRNL AUTH V.STOJANOSKI,C.J.ADAMSKI,L.HU,S.C.MEHTA,B.SANKARAN,P.ZWART, JRNL AUTH 2 B.V.PRASAD,T.PALZKILL JRNL TITL REMOVAL OF THE SIDE CHAIN AT THE ACTIVE-SITE SERINE BY A JRNL TITL 2 GLYCINE SUBSTITUTION INCREASES THE STABILITY OF A WIDE RANGE JRNL TITL 3 OF SERINE BETA-LACTAMASES BY RELIEVING STERIC STRAIN. JRNL REF BIOCHEMISTRY V. 55 2479 2016 JRNL REFN ISSN 0006-2960 JRNL PMID 27073009 JRNL DOI 10.1021/ACS.BIOCHEM.6B00056 REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 62.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.740 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 25438 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.790 REMARK 3 FREE R VALUE TEST SET COUNT : 1218 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 62.4251 - 4.4736 1.00 2704 134 0.1451 0.1841 REMARK 3 2 4.4736 - 3.5509 0.99 2682 146 0.1359 0.1775 REMARK 3 3 3.5509 - 3.1020 1.00 2671 168 0.1530 0.1964 REMARK 3 4 3.1020 - 2.8184 1.00 2746 113 0.1796 0.2193 REMARK 3 5 2.8184 - 2.6164 1.00 2692 117 0.1717 0.2087 REMARK 3 6 2.6164 - 2.4621 1.00 2695 143 0.1781 0.1864 REMARK 3 7 2.4621 - 2.3388 1.00 2662 168 0.1733 0.1929 REMARK 3 8 2.3388 - 2.2370 1.00 2711 136 0.1869 0.2356 REMARK 3 9 2.2370 - 2.1509 1.00 2728 115 0.2033 0.2585 REMARK 3 10 2.1509 - 2.0767 1.00 2740 142 0.2115 0.2166 REMARK 3 11 2.0767 - 2.0117 1.00 2712 112 0.2295 0.2520 REMARK 3 12 2.0117 - 1.9542 1.00 2718 120 0.2387 0.2716 REMARK 3 13 1.9542 - 1.9028 1.00 2706 143 0.2482 0.2610 REMARK 3 14 1.9028 - 1.8563 1.00 2724 111 0.2766 0.3260 REMARK 3 15 1.8563 - 1.8141 1.00 2682 153 0.3088 0.3746 REMARK 3 16 1.8141 - 1.7755 1.00 2710 137 0.3361 0.3896 REMARK 3 17 1.7755 - 1.7400 1.00 2715 154 0.3469 0.4130 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 1999 REMARK 3 ANGLE : 0.742 2691 REMARK 3 CHIRALITY : 0.052 282 REMARK 3 PLANARITY : 0.004 345 REMARK 3 DIHEDRAL : 13.392 1160 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.9674 0.8641 25.2190 REMARK 3 T TENSOR REMARK 3 T11: 0.2668 T22: 0.5771 REMARK 3 T33: 0.2559 T12: 0.1415 REMARK 3 T13: 0.0483 T23: 0.0308 REMARK 3 L TENSOR REMARK 3 L11: 1.2151 L22: 1.6214 REMARK 3 L33: 0.9109 L12: 0.3457 REMARK 3 L13: -0.2234 L23: -0.1290 REMARK 3 S TENSOR REMARK 3 S11: -0.1439 S12: -0.3733 S13: 0.3539 REMARK 3 S21: 0.2512 S22: 0.2660 S23: 0.4465 REMARK 3 S31: -0.3297 S32: -0.2908 S33: -0.0982 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 39 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3633 -4.1215 19.9707 REMARK 3 T TENSOR REMARK 3 T11: 0.1862 T22: 0.2423 REMARK 3 T33: 0.1227 T12: 0.0987 REMARK 3 T13: -0.0015 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 1.0798 L22: 0.8577 REMARK 3 L33: 1.1985 L12: -0.2555 REMARK 3 L13: 0.1763 L23: -0.0477 REMARK 3 S TENSOR REMARK 3 S11: -0.1600 S12: -0.4636 S13: -0.0069 REMARK 3 S21: 0.1804 S22: 0.2529 S23: 0.0854 REMARK 3 S31: -0.0327 S32: -0.0533 S33: -0.0562 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6981 -19.2563 0.9117 REMARK 3 T TENSOR REMARK 3 T11: 0.1995 T22: 0.1325 REMARK 3 T33: 0.1745 T12: -0.0321 REMARK 3 T13: -0.0044 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 1.7924 L22: 0.3685 REMARK 3 L33: 0.6838 L12: 0.3595 REMARK 3 L13: 0.5049 L23: 0.3008 REMARK 3 S TENSOR REMARK 3 S11: -0.2053 S12: 0.0914 S13: -0.3277 REMARK 3 S21: -0.0980 S22: 0.0984 S23: -0.1342 REMARK 3 S31: 0.1127 S32: -0.0805 S33: -0.0309 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 120 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2450 -16.9812 13.0701 REMARK 3 T TENSOR REMARK 3 T11: 0.2205 T22: 0.1888 REMARK 3 T33: 0.1806 T12: 0.0915 REMARK 3 T13: -0.0292 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 2.3470 L22: 0.9484 REMARK 3 L33: 1.2969 L12: 0.5492 REMARK 3 L13: 0.4652 L23: 0.1043 REMARK 3 S TENSOR REMARK 3 S11: -0.1110 S12: -0.3171 S13: -0.1790 REMARK 3 S21: 0.0449 S22: 0.0844 S23: -0.2130 REMARK 3 S31: 0.2596 S32: 0.0924 S33: -0.0852 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 143 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4033 -7.7307 15.8000 REMARK 3 T TENSOR REMARK 3 T11: 0.1546 T22: 0.2201 REMARK 3 T33: 0.1468 T12: 0.0493 REMARK 3 T13: -0.0272 T23: -0.0348 REMARK 3 L TENSOR REMARK 3 L11: 1.6349 L22: 1.0840 REMARK 3 L33: 1.4624 L12: -0.1972 REMARK 3 L13: -0.0631 L23: -0.0225 REMARK 3 S TENSOR REMARK 3 S11: -0.1129 S12: -0.4013 S13: 0.0255 REMARK 3 S21: 0.1457 S22: 0.0745 S23: -0.1678 REMARK 3 S31: 0.1333 S32: 0.0685 S33: 0.0392 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 195 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.8716 -2.9121 13.2591 REMARK 3 T TENSOR REMARK 3 T11: 0.1526 T22: 0.2303 REMARK 3 T33: 0.1954 T12: 0.0511 REMARK 3 T13: 0.0112 T23: 0.0817 REMARK 3 L TENSOR REMARK 3 L11: 1.3765 L22: 1.1319 REMARK 3 L33: 2.1645 L12: -0.8509 REMARK 3 L13: -0.1173 L23: -0.2159 REMARK 3 S TENSOR REMARK 3 S11: -0.0963 S12: -0.2231 S13: -0.0385 REMARK 3 S21: 0.1703 S22: 0.3509 S23: 0.3058 REMARK 3 S31: -0.0150 S32: -0.4283 S33: -0.1963 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HAR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000216772. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9970 REMARK 200 MONOCHROMATOR : SI(220) ASYMMETRIC CUT SINGLE REMARK 200 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25438 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740 REMARK 200 RESOLUTION RANGE LOW (A) : 62.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.03700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4S2L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M POTASSIUM ACETATE AND 20% W/V PEG REMARK 280 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.38500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.38500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 22.17000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.99000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 22.17000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.99000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 62.38500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 22.17000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.99000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 62.38500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 22.17000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 43.99000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 302 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 597 O HOH A 640 1.81 REMARK 500 O HOH A 610 O HOH A 627 1.83 REMARK 500 O HOH A 424 O HOH A 614 1.85 REMARK 500 O HOH A 487 O HOH A 581 1.90 REMARK 500 O HOH A 465 O HOH A 565 1.99 REMARK 500 O HOH A 598 O HOH A 621 2.03 REMARK 500 O HOH A 610 O HOH A 616 2.09 REMARK 500 O HOH A 497 O HOH A 628 2.13 REMARK 500 NE2 HIS A 34 OE1 GLN A 256 2.16 REMARK 500 O HOH A 547 O HOH A 631 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 128 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 THR A 213 CB - CA - C ANGL. DEV. = -16.4 DEGREES REMARK 500 TRP A 217 CB - CA - C ANGL. DEV. = -12.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 69 -139.39 51.86 REMARK 500 GLU A 147 21.14 48.01 REMARK 500 SER A 155 3.58 -155.83 REMARK 500 ASP A 159 29.02 -155.65 REMARK 500 ASN A 200 -164.63 -161.24 REMARK 500 THR A 213 6.82 83.01 REMARK 500 LYS A 214 -33.78 -138.12 REMARK 500 SER A 240 3.42 -63.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 661 DISTANCE = 6.79 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HAI RELATED DB: PDB REMARK 900 RELATED ID: 5HAP RELATED DB: PDB REMARK 900 RELATED ID: 5HAQ RELATED DB: PDB DBREF 5HAR A 25 261 UNP F6KZJ2 F6KZJ2_ENTCL 25 261 SEQADV 5HAR GLY A 70 UNP F6KZJ2 SER 70 ENGINEERED MUTATION SEQRES 1 A 237 TRP GLN GLU ASN LYS SER TRP ASN ALA HIS PHE THR GLU SEQRES 2 A 237 HIS LYS SER GLN GLY VAL VAL VAL LEU TRP ASN GLU ASN SEQRES 3 A 237 LYS GLN GLN GLY PHE THR ASN ASN LEU LYS ARG ALA ASN SEQRES 4 A 237 GLN ALA PHE LEU PRO ALA GLY THR PHE KCX ILE PRO ASN SEQRES 5 A 237 SER LEU ILE ALA LEU ASP LEU GLY VAL VAL LYS ASP GLU SEQRES 6 A 237 HIS GLN VAL PHE LYS TRP ASP GLY GLN THR ARG ASP ILE SEQRES 7 A 237 ALA THR TRP ASN ARG ASP HIS ASN LEU ILE THR ALA MET SEQRES 8 A 237 LYS TYR SER VAL VAL PRO VAL TYR GLN GLU PHE ALA ARG SEQRES 9 A 237 GLN ILE GLY GLU ALA ARG MET SER LYS MET LEU HIS ALA SEQRES 10 A 237 PHE ASP TYR GLY ASN GLU ASP ILE SER GLY ASN VAL ASP SEQRES 11 A 237 SER PHE TRP LEU ASP GLY GLY ILE ARG ILE SER ALA THR SEQRES 12 A 237 GLU GLN ILE SER PHE LEU ARG LYS LEU TYR HIS ASN LYS SEQRES 13 A 237 LEU HIS VAL SER GLU ARG SER GLN ARG ILE VAL LYS GLN SEQRES 14 A 237 ALA MET LEU THR GLU ALA ASN GLY ASP TYR ILE ILE ARG SEQRES 15 A 237 ALA LYS THR GLY TYR ASP THR LYS ILE GLY TRP TRP VAL SEQRES 16 A 237 GLY TRP VAL GLU LEU ASP ASP ASN VAL TRP PHE PHE ALA SEQRES 17 A 237 MET ASN MET ASP MET PRO THR SER ASP GLY LEU GLY LEU SEQRES 18 A 237 ARG GLN ALA ILE THR LYS GLU VAL LEU LYS GLN GLU LYS SEQRES 19 A 237 ILE ILE PRO MODRES 5HAR KCX A 73 LYS MODIFIED RESIDUE HET KCX A 73 12 HET ACT A 301 4 HET CL A 302 1 HETNAM KCX LYSINE NZ-CARBOXYLIC ACID HETNAM ACT ACETATE ION HETNAM CL CHLORIDE ION FORMUL 1 KCX C7 H14 N2 O4 FORMUL 2 ACT C2 H3 O2 1- FORMUL 3 CL CL 1- FORMUL 4 HOH *259(H2 O) HELIX 1 AA1 TRP A 31 GLU A 37 1 7 HELIX 2 AA2 ASN A 58 ASN A 63 1 6 HELIX 3 AA3 PRO A 68 THR A 71 5 4 HELIX 4 AA4 PHE A 72 LEU A 83 1 12 HELIX 5 AA5 ILE A 102 ASN A 106 5 5 HELIX 6 AA6 ASN A 110 TYR A 117 1 8 HELIX 7 AA7 VAL A 119 GLY A 131 1 13 HELIX 8 AA8 GLY A 131 ASP A 143 1 13 HELIX 9 AA9 SER A 155 GLY A 160 1 6 HELIX 10 AB1 SER A 165 HIS A 178 1 14 HELIX 11 AB2 SER A 184 MET A 195 1 12 HELIX 12 AB3 THR A 239 LEU A 243 5 5 HELIX 13 AB4 GLY A 244 GLU A 257 1 14 SHEET 1 AA1 7 GLN A 26 GLU A 27 0 SHEET 2 AA1 7 GLN A 53 THR A 56 1 O GLY A 54 N GLN A 26 SHEET 3 AA1 7 GLY A 42 ASN A 48 -1 N ASN A 48 O GLN A 53 SHEET 4 AA1 7 VAL A 228 ASP A 236 -1 O ASN A 234 N VAL A 43 SHEET 5 AA1 7 ILE A 215 GLU A 223 -1 N GLY A 220 O PHE A 231 SHEET 6 AA1 7 ILE A 204 TYR A 211 -1 N ILE A 204 O GLU A 223 SHEET 7 AA1 7 LEU A 196 ALA A 199 -1 N GLU A 198 O ILE A 205 LINK C PHE A 72 N KCX A 73 1555 1555 1.31 LINK C KCX A 73 N ILE A 74 1555 1555 1.32 SITE 1 AC1 6 GLY A 70 KCX A 73 SER A 118 VAL A 120 SITE 2 AC1 6 GLY A 210 TYR A 211 SITE 1 AC2 2 ARG A 206 HOH A 605 CRYST1 44.340 87.980 124.770 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022553 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011366 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008015 0.00000