HEADER HYDROLASE 31-DEC-15 5HBF TITLE CRYSTAL STRUCTURE OF HUMAN FULL-LENGTH CHITOTRIOSIDASE (CHIT1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHITOTRIOSIDASE-1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CHITINASE-1; COMPND 5 EC: 3.2.1.14; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CHIT1; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK293T KEYWDS CHITOTRIOSIDASE, CHITIN BINDING DOMAIN, CBM14, SEEDING, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.FADEL,Y.ZHAO,A.COUSIDO-SIAH,F.X.RUIZ,A.MITSCHLER,A.PODJARNY REVDAT 4 23-OCT-24 5HBF 1 REMARK REVDAT 3 27-SEP-23 5HBF 1 REMARK REVDAT 2 11-MAY-16 5HBF 1 JRNL REVDAT 1 04-MAY-16 5HBF 0 JRNL AUTH F.FADEL,Y.ZHAO,A.COUSIDO-SIAH,F.X.RUIZ,A.MITSCHLER, JRNL AUTH 2 A.PODJARNY JRNL TITL X-RAY CRYSTAL STRUCTURE OF THE FULL LENGTH HUMAN JRNL TITL 2 CHITOTRIOSIDASE (CHIT1) REVEALS FEATURES OF ITS CHITIN JRNL TITL 3 BINDING DOMAIN. JRNL REF PLOS ONE V. 11 54190 2016 JRNL REFN ESSN 1932-6203 JRNL PMID 27111557 JRNL DOI 10.1371/JOURNAL.PONE.0154190 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1255 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.2 REMARK 3 NUMBER OF REFLECTIONS : 114846 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.180 REMARK 3 FREE R VALUE TEST SET COUNT : 3655 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6977 - 5.7537 0.95 4514 155 0.1591 0.1610 REMARK 3 2 5.7537 - 4.5684 0.84 3989 135 0.1501 0.1921 REMARK 3 3 4.5684 - 3.9913 0.85 4055 138 0.1513 0.1733 REMARK 3 4 3.9913 - 3.6266 0.90 4270 144 0.1661 0.2013 REMARK 3 5 3.6266 - 3.3667 0.92 4367 148 0.1751 0.2115 REMARK 3 6 3.3667 - 3.1683 0.94 4428 141 0.1958 0.2429 REMARK 3 7 3.1683 - 3.0096 0.94 4502 150 0.2069 0.2576 REMARK 3 8 3.0096 - 2.8787 0.95 4463 146 0.2085 0.3111 REMARK 3 9 2.8787 - 2.7679 0.95 4513 147 0.2166 0.2525 REMARK 3 10 2.7679 - 2.6724 0.90 4286 144 0.2145 0.2518 REMARK 3 11 2.6724 - 2.5888 0.88 4183 136 0.2242 0.2975 REMARK 3 12 2.5888 - 2.5148 0.86 4079 133 0.2196 0.2500 REMARK 3 13 2.5148 - 2.4486 0.84 3971 126 0.2314 0.2834 REMARK 3 14 2.4486 - 2.3889 0.88 4227 145 0.2478 0.3227 REMARK 3 15 2.3889 - 2.3346 0.90 4241 144 0.2581 0.3474 REMARK 3 16 2.3346 - 2.2849 0.91 4307 145 0.2590 0.3117 REMARK 3 17 2.2849 - 2.2392 0.91 4269 145 0.2562 0.3616 REMARK 3 18 2.2392 - 2.1969 0.92 4410 141 0.2644 0.3366 REMARK 3 19 2.1969 - 2.1577 0.92 4420 135 0.2700 0.3113 REMARK 3 20 2.1577 - 2.1211 0.92 4313 145 0.2766 0.2992 REMARK 3 21 2.1211 - 2.0869 0.93 4437 140 0.2828 0.3031 REMARK 3 22 2.0869 - 2.0548 0.93 4402 138 0.2899 0.3240 REMARK 3 23 2.0548 - 2.0246 0.93 4474 145 0.3046 0.3664 REMARK 3 24 2.0246 - 1.9961 0.93 4405 146 0.3300 0.3902 REMARK 3 25 1.9961 - 1.9691 0.92 4314 136 0.3532 0.3883 REMARK 3 26 1.9691 - 1.9435 0.70 3352 107 0.3956 0.4454 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6956 REMARK 3 ANGLE : 1.095 9412 REMARK 3 CHIRALITY : 0.077 981 REMARK 3 PLANARITY : 0.005 1233 REMARK 3 DIHEDRAL : 15.260 2510 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HBF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000216778. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 114875 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 44.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 15.0600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.63000 REMARK 200 FOR SHELL : 1.850 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4WJX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG3350, 0.02 M HEPES, PH 6.8, REMARK 280 0.2% MPD, 0.2% 1,2,3-HEPTANETRIOL, 0.2% REMARK 280 DIETHYLENETRIAMINEPENTAKIS, 0.2% D-SORBITOL, 0.2% GLYCEROL, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 53.33050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 ARG A 3 REMARK 465 SER A 4 REMARK 465 VAL A 5 REMARK 465 ALA A 6 REMARK 465 TRP A 7 REMARK 465 ALA A 8 REMARK 465 GLY A 9 REMARK 465 PHE A 10 REMARK 465 MET A 11 REMARK 465 VAL A 12 REMARK 465 LEU A 13 REMARK 465 LEU A 14 REMARK 465 MET A 15 REMARK 465 ILE A 16 REMARK 465 PRO A 17 REMARK 465 TRP A 18 REMARK 465 GLY A 19 REMARK 465 SER A 20 REMARK 465 ALA A 21 REMARK 465 PRO A 388 REMARK 465 TYR A 389 REMARK 465 LEU A 390 REMARK 465 PRO A 391 REMARK 465 SER A 392 REMARK 465 GLY A 393 REMARK 465 THR A 394 REMARK 465 PRO A 395 REMARK 465 GLU A 396 REMARK 465 LEU A 397 REMARK 465 GLU A 398 REMARK 465 VAL A 399 REMARK 465 PRO A 400 REMARK 465 LYS A 401 REMARK 465 PRO A 402 REMARK 465 GLY A 403 REMARK 465 GLN A 404 REMARK 465 PRO A 405 REMARK 465 SER A 406 REMARK 465 GLU A 407 REMARK 465 PRO A 408 REMARK 465 GLU A 409 REMARK 465 HIS A 410 REMARK 465 GLY A 411 REMARK 465 PRO A 412 REMARK 465 SER A 413 REMARK 465 PRO A 414 REMARK 465 GLY A 415 REMARK 465 GLU A 474 REMARK 465 HIS A 475 REMARK 465 HIS A 476 REMARK 465 HIS A 477 REMARK 465 HIS A 478 REMARK 465 HIS A 479 REMARK 465 HIS A 480 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 ARG B 3 REMARK 465 SER B 4 REMARK 465 VAL B 5 REMARK 465 ALA B 6 REMARK 465 TRP B 7 REMARK 465 ALA B 8 REMARK 465 GLY B 9 REMARK 465 PHE B 10 REMARK 465 MET B 11 REMARK 465 VAL B 12 REMARK 465 LEU B 13 REMARK 465 LEU B 14 REMARK 465 MET B 15 REMARK 465 ILE B 16 REMARK 465 PRO B 17 REMARK 465 TRP B 18 REMARK 465 GLY B 19 REMARK 465 SER B 20 REMARK 465 ALA B 21 REMARK 465 LEU B 387 REMARK 465 PRO B 388 REMARK 465 TYR B 389 REMARK 465 LEU B 390 REMARK 465 PRO B 391 REMARK 465 SER B 392 REMARK 465 GLY B 393 REMARK 465 THR B 394 REMARK 465 PRO B 395 REMARK 465 GLU B 396 REMARK 465 LEU B 397 REMARK 465 GLU B 398 REMARK 465 VAL B 399 REMARK 465 PRO B 400 REMARK 465 LYS B 401 REMARK 465 PRO B 402 REMARK 465 GLY B 403 REMARK 465 GLN B 404 REMARK 465 PRO B 405 REMARK 465 SER B 406 REMARK 465 GLU B 407 REMARK 465 PRO B 408 REMARK 465 GLU B 409 REMARK 465 HIS B 410 REMARK 465 GLY B 411 REMARK 465 PRO B 412 REMARK 465 SER B 413 REMARK 465 PRO B 414 REMARK 465 GLY B 415 REMARK 465 GLN B 416 REMARK 465 ASP B 417 REMARK 465 THR B 418 REMARK 465 HIS B 479 REMARK 465 HIS B 480 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 347 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 GLY B 422 N - CA - C ANGL. DEV. = -16.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 145 -119.97 51.68 REMARK 500 SER A 226 63.53 -150.12 REMARK 500 ASP A 328 -125.03 53.31 REMARK 500 ASP A 417 -16.75 81.77 REMARK 500 THR B 103 -32.83 66.98 REMARK 500 ASP B 138 52.12 -117.73 REMARK 500 ASP B 138 59.56 -118.11 REMARK 500 SER B 226 61.59 -157.04 REMARK 500 THR B 266 31.92 -97.27 REMARK 500 ASP B 328 -122.00 52.26 REMARK 500 LYS B 423 136.50 131.34 REMARK 500 ALA B 424 110.62 95.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 502 DBREF 5HBF A 1 466 UNP Q13231 CHIT1_HUMAN 1 466 DBREF 5HBF B 1 466 UNP Q13231 CHIT1_HUMAN 1 466 SEQADV 5HBF LEU A 467 UNP Q13231 EXPRESSION TAG SEQADV 5HBF VAL A 468 UNP Q13231 EXPRESSION TAG SEQADV 5HBF PRO A 469 UNP Q13231 EXPRESSION TAG SEQADV 5HBF ARG A 470 UNP Q13231 EXPRESSION TAG SEQADV 5HBF GLY A 471 UNP Q13231 EXPRESSION TAG SEQADV 5HBF SER A 472 UNP Q13231 EXPRESSION TAG SEQADV 5HBF LEU A 473 UNP Q13231 EXPRESSION TAG SEQADV 5HBF GLU A 474 UNP Q13231 EXPRESSION TAG SEQADV 5HBF HIS A 475 UNP Q13231 EXPRESSION TAG SEQADV 5HBF HIS A 476 UNP Q13231 EXPRESSION TAG SEQADV 5HBF HIS A 477 UNP Q13231 EXPRESSION TAG SEQADV 5HBF HIS A 478 UNP Q13231 EXPRESSION TAG SEQADV 5HBF HIS A 479 UNP Q13231 EXPRESSION TAG SEQADV 5HBF HIS A 480 UNP Q13231 EXPRESSION TAG SEQADV 5HBF LEU B 467 UNP Q13231 EXPRESSION TAG SEQADV 5HBF VAL B 468 UNP Q13231 EXPRESSION TAG SEQADV 5HBF PRO B 469 UNP Q13231 EXPRESSION TAG SEQADV 5HBF ARG B 470 UNP Q13231 EXPRESSION TAG SEQADV 5HBF GLY B 471 UNP Q13231 EXPRESSION TAG SEQADV 5HBF SER B 472 UNP Q13231 EXPRESSION TAG SEQADV 5HBF LEU B 473 UNP Q13231 EXPRESSION TAG SEQADV 5HBF GLU B 474 UNP Q13231 EXPRESSION TAG SEQADV 5HBF HIS B 475 UNP Q13231 EXPRESSION TAG SEQADV 5HBF HIS B 476 UNP Q13231 EXPRESSION TAG SEQADV 5HBF HIS B 477 UNP Q13231 EXPRESSION TAG SEQADV 5HBF HIS B 478 UNP Q13231 EXPRESSION TAG SEQADV 5HBF HIS B 479 UNP Q13231 EXPRESSION TAG SEQADV 5HBF HIS B 480 UNP Q13231 EXPRESSION TAG SEQRES 1 A 480 MET VAL ARG SER VAL ALA TRP ALA GLY PHE MET VAL LEU SEQRES 2 A 480 LEU MET ILE PRO TRP GLY SER ALA ALA LYS LEU VAL CYS SEQRES 3 A 480 TYR PHE THR ASN TRP ALA GLN TYR ARG GLN GLY GLU ALA SEQRES 4 A 480 ARG PHE LEU PRO LYS ASP LEU ASP PRO SER LEU CYS THR SEQRES 5 A 480 HIS LEU ILE TYR ALA PHE ALA GLY MET THR ASN HIS GLN SEQRES 6 A 480 LEU SER THR THR GLU TRP ASN ASP GLU THR LEU TYR GLN SEQRES 7 A 480 GLU PHE ASN GLY LEU LYS LYS MET ASN PRO LYS LEU LYS SEQRES 8 A 480 THR LEU LEU ALA ILE GLY GLY TRP ASN PHE GLY THR GLN SEQRES 9 A 480 LYS PHE THR ASP MET VAL ALA THR ALA ASN ASN ARG GLN SEQRES 10 A 480 THR PHE VAL ASN SER ALA ILE ARG PHE LEU ARG LYS TYR SEQRES 11 A 480 SER PHE ASP GLY LEU ASP LEU ASP TRP GLU TYR PRO GLY SEQRES 12 A 480 SER GLN GLY SER PRO ALA VAL ASP LYS GLU ARG PHE THR SEQRES 13 A 480 THR LEU VAL GLN ASP LEU ALA ASN ALA PHE GLN GLN GLU SEQRES 14 A 480 ALA GLN THR SER GLY LYS GLU ARG LEU LEU LEU SER ALA SEQRES 15 A 480 ALA VAL PRO ALA GLY GLN THR TYR VAL ASP ALA GLY TYR SEQRES 16 A 480 GLU VAL ASP LYS ILE ALA GLN ASN LEU ASP PHE VAL ASN SEQRES 17 A 480 LEU MET ALA TYR ASP PHE HIS GLY SER TRP GLU LYS VAL SEQRES 18 A 480 THR GLY HIS ASN SER PRO LEU TYR LYS ARG GLN GLU GLU SEQRES 19 A 480 SER GLY ALA ALA ALA SER LEU ASN VAL ASP ALA ALA VAL SEQRES 20 A 480 GLN GLN TRP LEU GLN LYS GLY THR PRO ALA SER LYS LEU SEQRES 21 A 480 ILE LEU GLY MET PRO THR TYR GLY ARG SER PHE THR LEU SEQRES 22 A 480 ALA SER SER SER ASP THR ARG VAL GLY ALA PRO ALA THR SEQRES 23 A 480 GLY SER GLY THR PRO GLY PRO PHE THR LYS GLU GLY GLY SEQRES 24 A 480 MET LEU ALA TYR TYR GLU VAL CYS SER TRP LYS GLY ALA SEQRES 25 A 480 THR LYS GLN ARG ILE GLN ASP GLN LYS VAL PRO TYR ILE SEQRES 26 A 480 PHE ARG ASP ASN GLN TRP VAL GLY PHE ASP ASP VAL GLU SEQRES 27 A 480 SER PHE LYS THR LYS VAL SER TYR LEU LYS GLN LYS GLY SEQRES 28 A 480 LEU GLY GLY ALA MET VAL TRP ALA LEU ASP LEU ASP ASP SEQRES 29 A 480 PHE ALA GLY PHE SER CYS ASN GLN GLY ARG TYR PRO LEU SEQRES 30 A 480 ILE GLN THR LEU ARG GLN GLU LEU SER LEU PRO TYR LEU SEQRES 31 A 480 PRO SER GLY THR PRO GLU LEU GLU VAL PRO LYS PRO GLY SEQRES 32 A 480 GLN PRO SER GLU PRO GLU HIS GLY PRO SER PRO GLY GLN SEQRES 33 A 480 ASP THR PHE CYS GLN GLY LYS ALA ASP GLY LEU TYR PRO SEQRES 34 A 480 ASN PRO ARG GLU ARG SER SER PHE TYR SER CYS ALA ALA SEQRES 35 A 480 GLY ARG LEU PHE GLN GLN SER CYS PRO THR GLY LEU VAL SEQRES 36 A 480 PHE SER ASN SER CYS LYS CYS CYS THR TRP ASN LEU VAL SEQRES 37 A 480 PRO ARG GLY SER LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 480 MET VAL ARG SER VAL ALA TRP ALA GLY PHE MET VAL LEU SEQRES 2 B 480 LEU MET ILE PRO TRP GLY SER ALA ALA LYS LEU VAL CYS SEQRES 3 B 480 TYR PHE THR ASN TRP ALA GLN TYR ARG GLN GLY GLU ALA SEQRES 4 B 480 ARG PHE LEU PRO LYS ASP LEU ASP PRO SER LEU CYS THR SEQRES 5 B 480 HIS LEU ILE TYR ALA PHE ALA GLY MET THR ASN HIS GLN SEQRES 6 B 480 LEU SER THR THR GLU TRP ASN ASP GLU THR LEU TYR GLN SEQRES 7 B 480 GLU PHE ASN GLY LEU LYS LYS MET ASN PRO LYS LEU LYS SEQRES 8 B 480 THR LEU LEU ALA ILE GLY GLY TRP ASN PHE GLY THR GLN SEQRES 9 B 480 LYS PHE THR ASP MET VAL ALA THR ALA ASN ASN ARG GLN SEQRES 10 B 480 THR PHE VAL ASN SER ALA ILE ARG PHE LEU ARG LYS TYR SEQRES 11 B 480 SER PHE ASP GLY LEU ASP LEU ASP TRP GLU TYR PRO GLY SEQRES 12 B 480 SER GLN GLY SER PRO ALA VAL ASP LYS GLU ARG PHE THR SEQRES 13 B 480 THR LEU VAL GLN ASP LEU ALA ASN ALA PHE GLN GLN GLU SEQRES 14 B 480 ALA GLN THR SER GLY LYS GLU ARG LEU LEU LEU SER ALA SEQRES 15 B 480 ALA VAL PRO ALA GLY GLN THR TYR VAL ASP ALA GLY TYR SEQRES 16 B 480 GLU VAL ASP LYS ILE ALA GLN ASN LEU ASP PHE VAL ASN SEQRES 17 B 480 LEU MET ALA TYR ASP PHE HIS GLY SER TRP GLU LYS VAL SEQRES 18 B 480 THR GLY HIS ASN SER PRO LEU TYR LYS ARG GLN GLU GLU SEQRES 19 B 480 SER GLY ALA ALA ALA SER LEU ASN VAL ASP ALA ALA VAL SEQRES 20 B 480 GLN GLN TRP LEU GLN LYS GLY THR PRO ALA SER LYS LEU SEQRES 21 B 480 ILE LEU GLY MET PRO THR TYR GLY ARG SER PHE THR LEU SEQRES 22 B 480 ALA SER SER SER ASP THR ARG VAL GLY ALA PRO ALA THR SEQRES 23 B 480 GLY SER GLY THR PRO GLY PRO PHE THR LYS GLU GLY GLY SEQRES 24 B 480 MET LEU ALA TYR TYR GLU VAL CYS SER TRP LYS GLY ALA SEQRES 25 B 480 THR LYS GLN ARG ILE GLN ASP GLN LYS VAL PRO TYR ILE SEQRES 26 B 480 PHE ARG ASP ASN GLN TRP VAL GLY PHE ASP ASP VAL GLU SEQRES 27 B 480 SER PHE LYS THR LYS VAL SER TYR LEU LYS GLN LYS GLY SEQRES 28 B 480 LEU GLY GLY ALA MET VAL TRP ALA LEU ASP LEU ASP ASP SEQRES 29 B 480 PHE ALA GLY PHE SER CYS ASN GLN GLY ARG TYR PRO LEU SEQRES 30 B 480 ILE GLN THR LEU ARG GLN GLU LEU SER LEU PRO TYR LEU SEQRES 31 B 480 PRO SER GLY THR PRO GLU LEU GLU VAL PRO LYS PRO GLY SEQRES 32 B 480 GLN PRO SER GLU PRO GLU HIS GLY PRO SER PRO GLY GLN SEQRES 33 B 480 ASP THR PHE CYS GLN GLY LYS ALA ASP GLY LEU TYR PRO SEQRES 34 B 480 ASN PRO ARG GLU ARG SER SER PHE TYR SER CYS ALA ALA SEQRES 35 B 480 GLY ARG LEU PHE GLN GLN SER CYS PRO THR GLY LEU VAL SEQRES 36 B 480 PHE SER ASN SER CYS LYS CYS CYS THR TRP ASN LEU VAL SEQRES 37 B 480 PRO ARG GLY SER LEU GLU HIS HIS HIS HIS HIS HIS HET GOL A 501 6 HET GOL A 502 6 HET GOL B 501 6 HET GOL B 502 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 4(C3 H8 O3) FORMUL 7 HOH *175(H2 O) HELIX 1 AA1 TRP A 31 ARG A 35 5 5 HELIX 2 AA2 GLN A 36 ARG A 40 5 5 HELIX 3 AA3 LEU A 42 LEU A 46 5 5 HELIX 4 AA4 ASN A 72 GLY A 82 1 11 HELIX 5 AA5 LEU A 83 MET A 86 5 4 HELIX 6 AA6 THR A 103 THR A 112 1 10 HELIX 7 AA7 THR A 112 TYR A 130 1 19 HELIX 8 AA8 VAL A 150 GLY A 174 1 25 HELIX 9 AA9 GLY A 187 TYR A 195 1 9 HELIX 10 AB1 GLU A 196 LEU A 204 1 9 HELIX 11 AB2 SER A 235 LEU A 241 5 7 HELIX 12 AB3 ASN A 242 LYS A 253 1 12 HELIX 13 AB4 PRO A 256 SER A 258 5 3 HELIX 14 AB5 TYR A 303 CYS A 307 1 5 HELIX 15 AB6 ASP A 336 LYS A 350 1 15 HELIX 16 AB7 ALA A 359 ASP A 363 5 5 HELIX 17 AB8 TYR A 375 SER A 386 1 12 HELIX 18 AB9 TRP B 31 ARG B 35 5 5 HELIX 19 AC1 GLN B 36 ARG B 40 5 5 HELIX 20 AC2 LEU B 42 LEU B 46 5 5 HELIX 21 AC3 ASN B 72 GLY B 82 1 11 HELIX 22 AC4 LEU B 83 MET B 86 5 4 HELIX 23 AC5 THR B 103 THR B 112 1 10 HELIX 24 AC6 THR B 112 SER B 131 1 20 HELIX 25 AC7 VAL B 150 SER B 173 1 24 HELIX 26 AC8 GLY B 187 TYR B 195 1 9 HELIX 27 AC9 GLU B 196 LEU B 204 1 9 HELIX 28 AD1 SER B 235 LEU B 241 5 7 HELIX 29 AD2 ASN B 242 LYS B 253 1 12 HELIX 30 AD3 PRO B 256 SER B 258 5 3 HELIX 31 AD4 TYR B 303 CYS B 307 1 5 HELIX 32 AD5 ASP B 336 LYS B 350 1 15 HELIX 33 AD6 ALA B 359 ASP B 363 5 5 HELIX 34 AD7 TYR B 375 SER B 386 1 12 SHEET 1 AA110 GLN A 65 SER A 67 0 SHEET 2 AA110 HIS A 53 THR A 62 -1 N GLY A 60 O SER A 67 SHEET 3 AA110 LYS A 91 GLY A 97 1 O ALA A 95 N TYR A 56 SHEET 4 AA110 GLY A 134 ASP A 138 1 O ASP A 138 N ILE A 96 SHEET 5 AA110 LEU A 179 PRO A 185 1 O SER A 181 N LEU A 135 SHEET 6 AA110 PHE A 206 MET A 210 1 O MET A 210 N VAL A 184 SHEET 7 AA110 LEU A 260 PRO A 265 1 O ILE A 261 N VAL A 207 SHEET 8 AA110 GLY A 354 TRP A 358 1 O MET A 356 N LEU A 262 SHEET 9 AA110 LYS A 23 THR A 29 1 N VAL A 25 O ALA A 355 SHEET 10 AA110 HIS A 53 THR A 62 1 O ILE A 55 N PHE A 28 SHEET 1 AA2 3 ALA A 285 SER A 288 0 SHEET 2 AA2 3 TYR A 267 LEU A 273 -1 N THR A 272 O GLY A 287 SHEET 3 AA2 3 MET A 300 ALA A 302 -1 O LEU A 301 N GLY A 268 SHEET 1 AA3 5 ALA A 285 SER A 288 0 SHEET 2 AA3 5 TYR A 267 LEU A 273 -1 N THR A 272 O GLY A 287 SHEET 3 AA3 5 GLN A 330 GLY A 333 -1 O TRP A 331 N PHE A 271 SHEET 4 AA3 5 VAL A 322 ARG A 327 -1 N ILE A 325 O VAL A 332 SHEET 5 AA3 5 THR A 313 ILE A 317 -1 N ILE A 317 O VAL A 322 SHEET 1 AA4 3 GLY A 426 ASN A 430 0 SHEET 2 AA4 3 GLU A 433 ALA A 441 -1 O TYR A 438 N TYR A 428 SHEET 3 AA4 3 ARG A 444 SER A 449 -1 O GLN A 448 N PHE A 437 SHEET 1 AA5 2 VAL A 455 SER A 457 0 SHEET 2 AA5 2 CYS A 462 THR A 464 -1 O THR A 464 N VAL A 455 SHEET 1 AA610 GLN B 65 SER B 67 0 SHEET 2 AA610 HIS B 53 THR B 62 -1 N GLY B 60 O SER B 67 SHEET 3 AA610 LYS B 91 GLY B 97 1 O ALA B 95 N ALA B 59 SHEET 4 AA610 GLY B 134 ASP B 138 1 O ASP B 136 N LEU B 94 SHEET 5 AA610 LEU B 179 PRO B 185 1 O LEU B 179 N LEU B 135 SHEET 6 AA610 PHE B 206 MET B 210 1 O MET B 210 N VAL B 184 SHEET 7 AA610 LEU B 260 PRO B 265 1 O ILE B 261 N VAL B 207 SHEET 8 AA610 GLY B 354 TRP B 358 1 O MET B 356 N LEU B 262 SHEET 9 AA610 LYS B 23 THR B 29 1 N VAL B 25 O VAL B 357 SHEET 10 AA610 HIS B 53 THR B 62 1 O ILE B 55 N PHE B 28 SHEET 1 AA7 3 ALA B 285 SER B 288 0 SHEET 2 AA7 3 TYR B 267 LEU B 273 -1 N THR B 272 O THR B 286 SHEET 3 AA7 3 MET B 300 ALA B 302 -1 O LEU B 301 N GLY B 268 SHEET 1 AA8 5 ALA B 285 SER B 288 0 SHEET 2 AA8 5 TYR B 267 LEU B 273 -1 N THR B 272 O THR B 286 SHEET 3 AA8 5 GLN B 330 GLY B 333 -1 O TRP B 331 N PHE B 271 SHEET 4 AA8 5 VAL B 322 ARG B 327 -1 N ILE B 325 O VAL B 332 SHEET 5 AA8 5 THR B 313 ILE B 317 -1 N THR B 313 O PHE B 326 SHEET 1 AA9 3 GLY B 426 PRO B 429 0 SHEET 2 AA9 3 SER B 436 CYS B 440 -1 O TYR B 438 N TYR B 428 SHEET 3 AA9 3 LEU B 445 SER B 449 -1 O PHE B 446 N SER B 439 SHEET 1 AB1 2 VAL B 455 SER B 457 0 SHEET 2 AB1 2 CYS B 462 THR B 464 -1 O CYS B 462 N SER B 457 SSBOND 1 CYS A 26 CYS A 51 1555 1555 2.04 SSBOND 2 CYS A 307 CYS A 370 1555 1555 2.03 SSBOND 3 CYS A 420 CYS A 440 1555 1555 2.04 SSBOND 4 CYS A 450 CYS A 463 1555 1555 2.05 SSBOND 5 CYS A 460 CYS A 462 1555 1555 2.05 SSBOND 6 CYS B 26 CYS B 51 1555 1555 2.04 SSBOND 7 CYS B 307 CYS B 370 1555 1555 2.03 SSBOND 8 CYS B 420 CYS B 440 1555 1555 1.86 SSBOND 9 CYS B 450 CYS B 463 1555 1555 2.04 SSBOND 10 CYS B 460 CYS B 462 1555 1555 2.04 CISPEP 1 ALA A 57 PHE A 58 0 -4.08 CISPEP 2 GLU A 140 TYR A 141 0 -4.77 CISPEP 3 TRP A 358 ALA A 359 0 4.66 CISPEP 4 GLN A 421 GLY A 422 0 -7.70 CISPEP 5 ALA B 57 PHE B 58 0 -3.68 CISPEP 6 GLU B 140 TYR B 141 0 -6.92 CISPEP 7 TRP B 358 ALA B 359 0 0.05 CISPEP 8 GLY B 422 LYS B 423 0 -1.09 SITE 1 AC1 9 TYR A 141 PRO A 185 ALA A 186 GLY A 187 SITE 2 AC1 9 TYR A 190 MET A 210 TYR A 212 ASP A 213 SITE 3 AC1 9 ARG A 470 SITE 1 AC2 6 TYR A 303 LYS A 314 ASP A 336 VAL A 337 SITE 2 AC2 6 GLN A 372 HOH A 662 SITE 1 AC3 3 TRP B 31 ASN B 100 LEU B 473 SITE 1 AC4 7 TRP B 99 ASP B 213 TYR B 267 ARG B 269 SITE 2 AC4 7 TRP B 358 ARG B 470 HOH B 640 CRYST1 51.143 106.661 85.670 90.00 107.13 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019553 0.000000 0.006026 0.00000 SCALE2 0.000000 0.009375 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012214 0.00000