HEADER PROTEIN BINDING 05-JAN-16 5HE9 TITLE BACTERIAL INITIATION PROTEIN IN COMPLEX WITH PHAGE INHIBITOR PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HELICASE LOADER; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PRIMOSOMAL PROTEIN DNAI; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PHAGE INHIBITOR PROTEIN; COMPND 8 CHAIN: E; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: DNAI; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS; SOURCE 9 ORGANISM_TAXID: 46170; SOURCE 10 GENE: OO23_07105; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INHIBITOR PROTEIN COMPLEX, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR I.V.HOOD,J.M.BERGER REVDAT 1 08-JUN-16 5HE9 0 JRNL AUTH I.V.HOOD,J.M.BERGER JRNL TITL STRUCTURE OF INHIBITED REPLICATIVE HELICASE LOADER FROM JRNL TITL 2 STAPHYLOCOCCUS AUREUS AT 1.9 ANGSTROM RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 44704 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 2274 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 0.0000 - 4.7859 1.00 2678 129 0.1629 0.1966 REMARK 3 2 4.7859 - 3.7993 1.00 2680 125 0.1340 0.1712 REMARK 3 3 3.7993 - 3.3193 1.00 2620 157 0.1594 0.1712 REMARK 3 4 3.3193 - 3.0159 1.00 2655 158 0.1702 0.2367 REMARK 3 5 3.0159 - 2.7997 1.00 2657 130 0.1758 0.2417 REMARK 3 6 2.7997 - 2.6347 1.00 2677 138 0.1782 0.2152 REMARK 3 7 2.6347 - 2.5027 1.00 2632 171 0.1817 0.1907 REMARK 3 8 2.5027 - 2.3938 1.00 2629 149 0.1762 0.2086 REMARK 3 9 2.3938 - 2.3017 1.00 2695 109 0.1906 0.2357 REMARK 3 10 2.3017 - 2.2222 1.00 2656 139 0.2459 0.2805 REMARK 3 11 2.2222 - 2.1528 1.00 2628 152 0.2060 0.2640 REMARK 3 12 2.1528 - 2.0912 1.00 2692 132 0.0000 0.0000 REMARK 3 13 2.0912 - 2.0362 1.00 2677 115 0.2330 0.2631 REMARK 3 14 2.0362 - 1.9865 1.00 2657 148 0.2520 0.2598 REMARK 3 15 1.9865 - 1.9413 1.00 2681 146 0.0000 0.0000 REMARK 3 16 1.9413 - 1.9000 0.97 2516 176 0.3967 0.4414 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 1863 REMARK 3 ANGLE : 1.335 2515 REMARK 3 CHIRALITY : 0.054 278 REMARK 3 PLANARITY : 0.006 318 REMARK 3 DIHEDRAL : 14.485 700 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 134 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1374 18.5078 87.4012 REMARK 3 T TENSOR REMARK 3 T11: 0.2412 T22: 0.3161 REMARK 3 T33: 0.2956 T12: 0.0106 REMARK 3 T13: -0.0159 T23: -0.0167 REMARK 3 L TENSOR REMARK 3 L11: 2.3990 L22: 6.7001 REMARK 3 L33: 2.5349 L12: -0.4934 REMARK 3 L13: 0.5497 L23: -1.4729 REMARK 3 S TENSOR REMARK 3 S11: 0.1634 S12: -0.0062 S13: -0.0777 REMARK 3 S21: 0.1774 S22: -0.1748 S23: 0.4956 REMARK 3 S31: 0.0096 S32: -0.2339 S33: 0.0076 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.2579 16.8472 92.4984 REMARK 3 T TENSOR REMARK 3 T11: 0.2332 T22: 0.2111 REMARK 3 T33: 0.2369 T12: 0.0050 REMARK 3 T13: -0.0237 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 1.8141 L22: 2.3631 REMARK 3 L33: 1.5979 L12: 0.6367 REMARK 3 L13: 0.3711 L23: -0.3183 REMARK 3 S TENSOR REMARK 3 S11: -0.0052 S12: 0.0392 S13: -0.0716 REMARK 3 S21: -0.0664 S22: -0.0115 S23: 0.2825 REMARK 3 S31: 0.1601 S32: -0.1710 S33: 0.0125 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 186 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.5907 14.4457 101.3696 REMARK 3 T TENSOR REMARK 3 T11: 0.2460 T22: 0.1981 REMARK 3 T33: 0.1718 T12: 0.0033 REMARK 3 T13: -0.0270 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 3.4236 L22: 1.6965 REMARK 3 L33: 1.8912 L12: 0.3403 REMARK 3 L13: 1.3895 L23: 0.5513 REMARK 3 S TENSOR REMARK 3 S11: 0.0973 S12: -0.3340 S13: -0.2893 REMARK 3 S21: 0.2148 S22: -0.1163 S23: -0.2255 REMARK 3 S31: 0.1638 S32: -0.1071 S33: -0.0167 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 204 THROUGH 226 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.0473 7.7838 101.2216 REMARK 3 T TENSOR REMARK 3 T11: 0.3346 T22: 0.2662 REMARK 3 T33: 0.2558 T12: 0.0065 REMARK 3 T13: -0.0080 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 1.7054 L22: 2.0330 REMARK 3 L33: 3.1077 L12: -0.1102 REMARK 3 L13: 0.9146 L23: -0.4546 REMARK 3 S TENSOR REMARK 3 S11: 0.2705 S12: -0.0829 S13: -0.1744 REMARK 3 S21: -0.2234 S22: -0.1647 S23: 0.0769 REMARK 3 S31: 0.4897 S32: -0.0495 S33: -0.0973 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 227 THROUGH 260 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7178 13.6270 91.0109 REMARK 3 T TENSOR REMARK 3 T11: 0.2510 T22: 0.2184 REMARK 3 T33: 0.1980 T12: 0.0479 REMARK 3 T13: 0.0009 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.0439 L22: 1.9193 REMARK 3 L33: 0.9891 L12: 0.1288 REMARK 3 L13: 0.0193 L23: 0.3344 REMARK 3 S TENSOR REMARK 3 S11: 0.0660 S12: 0.2048 S13: -0.1386 REMARK 3 S21: -0.1439 S22: -0.0456 S23: -0.2043 REMARK 3 S31: 0.2073 S32: 0.1990 S33: -0.0188 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 261 THROUGH 276 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.1034 26.3484 86.4736 REMARK 3 T TENSOR REMARK 3 T11: 0.2626 T22: 0.2724 REMARK 3 T33: 0.3025 T12: -0.0249 REMARK 3 T13: 0.0190 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.9117 L22: 2.0979 REMARK 3 L33: 1.4017 L12: 0.6549 REMARK 3 L13: -0.4599 L23: -0.3001 REMARK 3 S TENSOR REMARK 3 S11: -0.0215 S12: 0.3741 S13: 0.3357 REMARK 3 S21: -0.1939 S22: 0.0372 S23: -0.5842 REMARK 3 S31: -0.3655 S32: 0.3117 S33: 0.0290 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 277 THROUGH 300 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.0855 20.0908 83.8806 REMARK 3 T TENSOR REMARK 3 T11: 0.2044 T22: 0.1792 REMARK 3 T33: 0.1776 T12: 0.0097 REMARK 3 T13: -0.0185 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.4620 L22: 1.6628 REMARK 3 L33: 1.6860 L12: 0.6647 REMARK 3 L13: 0.3864 L23: 0.0724 REMARK 3 S TENSOR REMARK 3 S11: -0.1546 S12: 0.4513 S13: 0.0871 REMARK 3 S21: -0.0753 S22: 0.0096 S23: -0.0917 REMARK 3 S31: -0.0244 S32: 0.0939 S33: 0.0334 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'E' AND (RESID -3 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.6566 39.0931 100.2548 REMARK 3 T TENSOR REMARK 3 T11: 0.2185 T22: 0.2541 REMARK 3 T33: 0.2925 T12: -0.0445 REMARK 3 T13: -0.0233 T23: 0.0313 REMARK 3 L TENSOR REMARK 3 L11: 3.3994 L22: 3.6248 REMARK 3 L33: 2.6657 L12: 0.7835 REMARK 3 L13: 0.0434 L23: -0.0938 REMARK 3 S TENSOR REMARK 3 S11: -0.0295 S12: 0.3863 S13: 0.3375 REMARK 3 S21: -0.3238 S22: 0.1164 S23: 0.3139 REMARK 3 S31: -0.3288 S32: 0.1585 S33: 0.0915 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 12 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.0792 36.0504 94.8647 REMARK 3 T TENSOR REMARK 3 T11: 0.2664 T22: 0.2045 REMARK 3 T33: 0.2845 T12: -0.0446 REMARK 3 T13: -0.0546 T23: 0.0420 REMARK 3 L TENSOR REMARK 3 L11: 3.1796 L22: 4.4655 REMARK 3 L33: 2.7741 L12: -0.9271 REMARK 3 L13: 0.0988 L23: 0.0351 REMARK 3 S TENSOR REMARK 3 S11: -0.0007 S12: 0.4898 S13: 0.2842 REMARK 3 S21: -0.5279 S22: 0.1284 S23: 0.1375 REMARK 3 S31: -0.2549 S32: 0.0136 S33: 0.0796 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 29 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4192 35.7694 104.1847 REMARK 3 T TENSOR REMARK 3 T11: 0.2509 T22: 0.2166 REMARK 3 T33: 0.3000 T12: -0.0103 REMARK 3 T13: 0.0008 T23: -0.0335 REMARK 3 L TENSOR REMARK 3 L11: 2.6528 L22: 6.7065 REMARK 3 L33: 3.3020 L12: 0.3819 REMARK 3 L13: 0.2760 L23: -1.6759 REMARK 3 S TENSOR REMARK 3 S11: -0.0199 S12: -0.0623 S13: 0.5960 REMARK 3 S21: -0.0305 S22: 0.1565 S23: 0.1954 REMARK 3 S31: -0.2075 S32: -0.3662 S33: 0.0832 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 44 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.5901 16.2273 105.4705 REMARK 3 T TENSOR REMARK 3 T11: 0.2727 T22: 0.2006 REMARK 3 T33: 0.1745 T12: -0.0162 REMARK 3 T13: -0.0174 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 2.0439 L22: 2.3801 REMARK 3 L33: 1.4649 L12: 0.8441 REMARK 3 L13: 0.5695 L23: 0.0499 REMARK 3 S TENSOR REMARK 3 S11: 0.1513 S12: -0.1371 S13: -0.0296 REMARK 3 S21: 0.2932 S22: -0.0459 S23: 0.0178 REMARK 3 S31: 0.0981 S32: -0.2409 S33: 0.0366 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HE9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000216085. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 48.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM TRIS-HCL 8.5, 20 MM MGCL2, 20% REMARK 280 ETHANOL, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 294.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 126.48467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 63.24233 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 94.86350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 31.62117 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 158.10583 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 126.48467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 63.24233 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 31.62117 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 94.86350 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 158.10583 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 301 REMARK 465 ASN A 302 REMARK 465 PHE A 303 REMARK 465 ARG A 304 REMARK 465 ASN A 305 REMARK 465 ASN A 306 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD3 PRO A 234 HE2 MSE A 272 0.98 REMARK 500 CD PRO A 234 HE2 MSE A 272 1.12 REMARK 500 HG3 PRO A 234 HE1 MSE A 272 1.30 REMARK 500 HG2 PRO A 234 HE1 MSE A 272 1.34 REMARK 500 HH12 ARG E 43 O HOH E 101 1.45 REMARK 500 CG PRO A 234 HE1 MSE A 272 1.49 REMARK 500 CG PRO A 234 HE3 MSE A 272 1.51 REMARK 500 HH11 ARG A 217 O HOH A 504 1.54 REMARK 500 CD PRO A 234 CE MSE A 272 1.76 REMARK 500 O ASP A 206 O HOH A 501 1.86 REMARK 500 SD MET E 0 O HOH E 147 1.90 REMARK 500 CG MET E 0 O HOH E 147 1.91 REMARK 500 O HOH E 107 O HOH E 147 1.99 REMARK 500 O HOH E 156 O HOH E 163 2.01 REMARK 500 O HOH A 503 O HOH A 506 2.02 REMARK 500 OE1 GLU A 155 O HOH A 502 2.05 REMARK 500 O HOH A 505 O HOH A 578 2.10 REMARK 500 CZ ARG A 187 O HOH A 503 2.14 REMARK 500 NE ARG A 187 O HOH A 503 2.16 REMARK 500 O HOH A 580 O HOH A 620 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER A 291 OG SER A 291 12555 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 206 76.92 45.68 REMARK 500 GLU E 12 60.93 60.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 171 OG REMARK 620 2 ADP A 401 O2B 91.9 REMARK 620 3 HOH A 514 O 87.0 83.4 REMARK 620 4 HOH A 576 O 87.9 100.8 173.5 REMARK 620 5 HOH E 116 O 89.9 165.7 82.6 93.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BEF A 402 BE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP A 401 O3B REMARK 620 2 BEF A 402 F1 99.7 REMARK 620 3 BEF A 402 F2 103.5 120.0 REMARK 620 4 BEF A 402 F3 98.2 115.7 114.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEF A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HE8 RELATED DB: PDB DBREF 5HE9 A 136 306 UNP W8TSU2 W8TSU2_STAAU 136 306 DBREF1 5HE9 E 1 52 UNP A0A0J7LG86_STAAU DBREF2 5HE9 E A0A0J7LG86 1 52 SEQADV 5HE9 SER A 133 UNP W8TSU2 EXPRESSION TAG SEQADV 5HE9 ASN A 134 UNP W8TSU2 EXPRESSION TAG SEQADV 5HE9 ALA A 135 UNP W8TSU2 EXPRESSION TAG SEQADV 5HE9 SER E -3 UNP A0A0J7LG8 EXPRESSION TAG SEQADV 5HE9 ASN E -2 UNP A0A0J7LG8 EXPRESSION TAG SEQADV 5HE9 ALA E -1 UNP A0A0J7LG8 EXPRESSION TAG SEQADV 5HE9 MET E 0 UNP A0A0J7LG8 EXPRESSION TAG SEQRES 1 A 174 SER ASN ALA ASP ARG LEU ASP VAL ALA MSE ALA ALA ASP SEQRES 2 A 174 ASP ILE CYS THR ALA ILE THR ASN GLY GLU GLN VAL LYS SEQRES 3 A 174 GLY LEU TYR LEU TYR GLY PRO PHE GLY THR GLY LYS SER SEQRES 4 A 174 PHE ILE LEU GLY ALA ILE ALA ASN GLN LEU LYS SER LYS SEQRES 5 A 174 LYS VAL ARG SER THR ILE ILE TYR LEU PRO GLU PHE ILE SEQRES 6 A 174 ARG THR LEU LYS GLY GLY PHE LYS ASP GLY SER PHE GLU SEQRES 7 A 174 LYS LYS LEU HIS ARG VAL ARG GLU ALA ASN ILE LEU MSE SEQRES 8 A 174 LEU ASP ASP ILE GLY ALA GLU GLU VAL THR PRO TRP VAL SEQRES 9 A 174 ARG ASP GLU VAL ILE GLY PRO LEU LEU HIS TYR ARG MSE SEQRES 10 A 174 VAL HIS GLU LEU PRO THR PHE PHE SER SER ASN PHE ASP SEQRES 11 A 174 TYR SER GLU LEU GLU HIS HIS LEU ALA MSE THR ARG ASP SEQRES 12 A 174 GLY GLU GLU LYS THR LYS ALA ALA ARG ILE ILE GLU ARG SEQRES 13 A 174 VAL LYS SER LEU SER THR PRO TYR PHE LEU SER GLY GLU SEQRES 14 A 174 ASN PHE ARG ASN ASN SEQRES 1 E 56 SER ASN ALA MET MET VAL THR LYS GLU PHE LEU LYS THR SEQRES 2 E 56 LYS LEU GLU CYS SER ASP MET TYR ALA GLN LYS LEU ILE SEQRES 3 E 56 ASP GLU ALA GLN GLY ASP GLU ASN ARG LEU TYR ASP LEU SEQRES 4 E 56 PHE ILE GLN LYS LEU ALA GLU ARG HIS THR ARG PRO ALA SEQRES 5 E 56 ILE VAL GLU TYR MODRES 5HE9 MSE A 142 MET MODIFIED RESIDUE MODRES 5HE9 MSE A 223 MET MODIFIED RESIDUE MODRES 5HE9 MSE A 249 MET MODIFIED RESIDUE MODRES 5HE9 MSE A 272 MET MODIFIED RESIDUE HET MSE A 142 17 HET MSE A 223 17 HET MSE A 249 17 HET MSE A 272 17 HET ADP A 401 39 HET BEF A 402 4 HET MG A 403 1 HETNAM MSE SELENOMETHIONINE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM BEF BERYLLIUM TRIFLUORIDE ION HETNAM MG MAGNESIUM ION FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 ADP C10 H15 N5 O10 P2 FORMUL 4 BEF BE F3 1- FORMUL 5 MG MG 2+ FORMUL 6 HOH *202(H2 O) HELIX 1 AA1 SER A 133 ASN A 153 1 21 HELIX 2 AA2 GLY A 169 LYS A 184 1 16 HELIX 3 AA3 LEU A 193 GLY A 203 1 11 HELIX 4 AA4 GLY A 207 ARG A 217 1 11 HELIX 5 AA5 THR A 233 VAL A 240 1 8 HELIX 6 AA6 VAL A 240 HIS A 251 1 12 HELIX 7 AA7 ASP A 262 ALA A 271 1 10 HELIX 8 AA8 ASP A 275 LEU A 292 1 18 HELIX 9 AA9 ASN E -2 GLU E 12 1 15 HELIX 10 AB1 SER E 14 GLN E 26 1 13 HELIX 11 AB2 ASP E 28 HIS E 44 1 17 SHEET 1 AA1 6 SER A 293 PHE A 297 0 SHEET 2 AA1 6 GLY A 159 TYR A 163 1 N TYR A 161 O TYR A 296 SHEET 3 AA1 6 THR A 255 SER A 259 1 O PHE A 257 N LEU A 162 SHEET 4 AA1 6 LEU A 222 ASP A 225 1 N LEU A 224 O PHE A 256 SHEET 5 AA1 6 THR A 189 TYR A 192 1 N ILE A 191 O MSE A 223 SHEET 6 AA1 6 ILE E 49 GLU E 51 -1 O VAL E 50 N ILE A 190 LINK C ALA A 141 N MSE A 142 1555 1555 1.33 LINK C MSE A 142 N ALA A 143 1555 1555 1.34 LINK OG SER A 171 MG MG A 403 1555 1555 2.14 LINK C LEU A 222 N MSE A 223 1555 1555 1.33 LINK C MSE A 223 N LEU A 224 1555 1555 1.33 LINK CG PRO A 234 CE MSE A 272 1555 1555 1.56 LINK C ARG A 248 N MSE A 249 1555 1555 1.32 LINK C MSE A 249 N VAL A 250 1555 1555 1.33 LINK C ALA A 271 N MSE A 272 1555 1555 1.32 LINK C MSE A 272 N THR A 273 1555 1555 1.32 LINK O2B ADP A 401 MG MG A 403 1555 1555 2.09 LINK O3B ADP A 401 BE BEF A 402 1555 1555 1.92 LINK MG MG A 403 O HOH A 514 1555 1555 2.17 LINK MG MG A 403 O HOH A 576 1555 1555 2.07 LINK MG MG A 403 O HOH E 116 1555 1555 2.18 SITE 1 AC1 11 GLY A 167 THR A 168 GLY A 169 LYS A 170 SITE 2 AC1 11 SER A 171 PHE A 172 BEF A 402 MG A 403 SITE 3 AC1 11 HOH A 514 HOH A 531 HOH A 592 SITE 1 AC2 11 PHE A 166 GLY A 167 LYS A 170 ASP A 226 SITE 2 AC2 11 ASN A 260 ADP A 401 MG A 403 HOH A 565 SITE 3 AC2 11 HOH A 576 LYS E 39 HOH E 116 SITE 1 AC3 6 SER A 171 ADP A 401 BEF A 402 HOH A 514 SITE 2 AC3 6 HOH A 576 HOH E 116 CRYST1 73.173 73.173 189.727 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013666 0.007890 0.000000 0.00000 SCALE2 0.000000 0.015781 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005271 0.00000