HEADER CELL ADHESION 08-JAN-16 5HGJ TITLE STRUCTURE OF INTEGRIN ALPHA1BETA1 AND ALPHA2BETA1 I-DOMAINS EXPLAIN TITLE 2 DIFFERENTIAL CALCIUM-MEDIATED LIGAND RECOGNITION COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRIN ALPHA-1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: EXTRACELLULAR VWFA DOMAIN RESIDUES 170-364; COMPND 5 SYNONYM: CD49 ANTIGEN-LIKE FAMILY MEMBER A,LAMININ AND COLLAGEN COMPND 6 RECEPTOR,VLA-1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ITGA1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INTEGRIN, SIGNALING, ROSSMAN, I-DOMAIN, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR K.L.BROWN,S.BANERJEE,A.FEIGLEY,H.ABE,T.BLACKWELL,R.ZENT,A.POZZI, AUTHOR 2 B.H.HUDSON REVDAT 5 06-MAR-24 5HGJ 1 LINK REVDAT 4 04-DEC-19 5HGJ 1 REMARK REVDAT 3 28-FEB-18 5HGJ 1 JRNL REVDAT 2 20-SEP-17 5HGJ 1 REMARK REVDAT 1 12-APR-17 5HGJ 0 JRNL AUTH K.L.BROWN,S.BANERJEE,A.FEIGLEY,H.ABE,T.S.BLACKWELL,A.POZZI, JRNL AUTH 2 B.G.HUDSON,R.ZENT JRNL TITL SALT-BRIDGE MODULATES DIFFERENTIAL CALCIUM-MEDIATED LIGAND JRNL TITL 2 BINDING TO INTEGRIN ALPHA 1- AND ALPHA 2-I DOMAINS. JRNL REF SCI REP V. 8 2916 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 29440721 JRNL DOI 10.1038/S41598-018-21231-1 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 66995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3349 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.0032 - 4.0358 0.93 2691 141 0.1595 0.1847 REMARK 3 2 4.0358 - 3.2035 0.94 2687 142 0.1507 0.1601 REMARK 3 3 3.2035 - 2.7986 0.96 2703 143 0.1742 0.1956 REMARK 3 4 2.7986 - 2.5428 0.97 2740 144 0.1779 0.2122 REMARK 3 5 2.5428 - 2.3605 0.96 2711 143 0.1802 0.2175 REMARK 3 6 2.3605 - 2.2214 0.95 2681 141 0.1748 0.2170 REMARK 3 7 2.2214 - 2.1101 0.96 2682 141 0.1795 0.2059 REMARK 3 8 2.1101 - 2.0183 0.96 2719 144 0.1777 0.2193 REMARK 3 9 2.0183 - 1.9406 0.96 2730 143 0.1786 0.1812 REMARK 3 10 1.9406 - 1.8736 0.97 2702 143 0.1734 0.1957 REMARK 3 11 1.8736 - 1.8150 0.92 2612 137 0.1789 0.2059 REMARK 3 12 1.8150 - 1.7631 0.95 2678 141 0.1829 0.2306 REMARK 3 13 1.7631 - 1.7167 0.97 2705 142 0.1829 0.2155 REMARK 3 14 1.7167 - 1.6748 0.95 2697 141 0.1894 0.2165 REMARK 3 15 1.6748 - 1.6367 0.97 2730 144 0.1874 0.2282 REMARK 3 16 1.6367 - 1.6019 0.94 2657 140 0.1938 0.2225 REMARK 3 17 1.6019 - 1.5699 0.96 2692 141 0.1904 0.2204 REMARK 3 18 1.5699 - 1.5402 0.93 2618 138 0.2009 0.2330 REMARK 3 19 1.5402 - 1.5127 0.94 2661 139 0.2038 0.2479 REMARK 3 20 1.5127 - 1.4871 0.95 2656 140 0.2119 0.2466 REMARK 3 21 1.4871 - 1.4631 0.93 2638 138 0.2351 0.2740 REMARK 3 22 1.4631 - 1.4406 0.93 2591 137 0.2504 0.2996 REMARK 3 23 1.4406 - 1.4194 0.90 2587 137 0.2623 0.2891 REMARK 3 24 1.4194 - 1.3994 0.74 2078 109 0.2853 0.3135 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3135 REMARK 3 ANGLE : 1.058 4241 REMARK 3 CHIRALITY : 0.097 497 REMARK 3 PLANARITY : 0.005 548 REMARK 3 DIHEDRAL : 20.041 1185 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HGJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000216977. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67058 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.360 REMARK 200 RESOLUTION RANGE LOW (A) : 150.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, TRIS-HCL, CALCIUM CHLORIDE, REMARK 280 SODIUM CHLORIDE, GLYCEROL, PH 8, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.97500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 226 REMARK 465 GLU B 525 REMARK 465 ALA B 526 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA B 523 O REMARK 470 LEU B 524 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 181 OE1 GLU A 183 1.58 REMARK 500 NH2 ARG B 361 O HOH B 701 1.85 REMARK 500 O GLY B 407 O HOH B 702 1.94 REMARK 500 NH1 ARG B 361 O HOH B 703 1.97 REMARK 500 O VAL B 514 O HOH B 703 1.98 REMARK 500 ND2 ASN B 343 O HOH B 704 2.01 REMARK 500 NE2 GLN A 32 O LYS A 67 2.02 REMARK 500 OD1 ASN B 343 O HOH B 705 2.08 REMARK 500 OD1 ASP A 63 O HOH A 701 2.13 REMARK 500 O HOH A 715 O HOH B 737 2.15 REMARK 500 OE1 GLU B 487 O HOH B 706 2.16 REMARK 500 O HOH A 715 O HOH A 752 2.17 REMARK 500 O HOH A 813 O HOH A 880 2.17 REMARK 500 OE1 GLU A 78 NH1 ARG A 108 2.18 REMARK 500 O HOH A 705 O HOH A 880 2.18 REMARK 500 O HOH B 912 O HOH B 915 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 702 O HOH A 902 1655 2.10 REMARK 500 O HOH A 724 O HOH B 736 2546 2.12 REMARK 500 NH2 ARG A 108 OD1 ASN B 379 2546 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 78 CA - CB - CG ANGL. DEV. = 15.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 68 -129.14 -127.99 REMARK 500 MET A 111 67.20 -104.06 REMARK 500 GLU A 122 -52.72 -120.36 REMARK 500 GLN B 368 -130.48 -128.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 926 DISTANCE = 6.12 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 42 OG REMARK 620 2 SER A 44 OG 89.6 REMARK 620 3 ASP A 143 OD1 82.0 76.5 REMARK 620 4 HOH A 734 O 159.9 85.7 77.9 REMARK 620 5 HOH A 748 O 72.5 150.1 77.4 102.8 REMARK 620 6 HOH A 862 O 82.5 78.4 150.4 115.5 121.1 REMARK 620 7 HOH A 871 O 113.0 137.7 139.2 82.9 72.2 70.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 342 OG REMARK 620 2 SER B 344 OG 93.5 REMARK 620 3 ASP B 443 OD1 82.0 77.1 REMARK 620 4 HOH B 735 O 72.6 150.5 75.3 REMARK 620 5 HOH B 792 O 162.1 83.6 80.1 101.5 REMARK 620 6 HOH B 855 O 81.2 76.5 147.6 124.8 115.0 REMARK 620 7 HOH B 867 O 115.5 132.6 140.2 76.7 78.4 72.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 601 DBREF 5HGJ A 32 226 UNP P56199 ITA1_HUMAN 170 364 DBREF 5HGJ B 332 526 UNP P56199 ITA1_HUMAN 170 364 SEQRES 1 A 195 GLN LEU ASP ILE VAL ILE VAL LEU ASP GLY SER ASN SER SEQRES 2 A 195 ILE TYR PRO TRP ASP SER VAL THR ALA PHE LEU ASN ASP SEQRES 3 A 195 LEU LEU GLU ARG MET ASP ILE GLY PRO LYS GLN THR GLN SEQRES 4 A 195 VAL GLY ILE VAL GLN TYR GLY GLU ASN VAL THR HIS GLU SEQRES 5 A 195 PHE ASN LEU ASN LYS TYR SER SER THR GLU GLU VAL LEU SEQRES 6 A 195 VAL ALA ALA LYS LYS ILE VAL GLN ARG GLY GLY ARG GLN SEQRES 7 A 195 THR MET THR ALA LEU GLY ILE ASP THR ALA ARG LYS GLU SEQRES 8 A 195 ALA PHE THR GLU ALA ARG GLY ALA ARG ARG GLY VAL LYS SEQRES 9 A 195 LYS VAL MET VAL ILE VAL THR ASP GLY GLU SER HIS ASP SEQRES 10 A 195 ASN HIS ARG LEU LYS LYS VAL ILE GLN ASP CYS GLU ASP SEQRES 11 A 195 GLU ASN ILE GLN ARG PHE SER ILE ALA ILE LEU GLY SER SEQRES 12 A 195 TYR ASN ARG GLY ASN LEU SER THR GLU LYS PHE VAL GLU SEQRES 13 A 195 GLU ILE LYS SER ILE ALA SER GLU PRO THR GLU LYS HIS SEQRES 14 A 195 PHE PHE ASN VAL SER ASP GLU LEU ALA LEU VAL THR ILE SEQRES 15 A 195 VAL LYS THR LEU GLY GLU ARG ILE PHE ALA LEU GLU ALA SEQRES 1 B 195 GLN LEU ASP ILE VAL ILE VAL LEU ASP GLY SER ASN SER SEQRES 2 B 195 ILE TYR PRO TRP ASP SER VAL THR ALA PHE LEU ASN ASP SEQRES 3 B 195 LEU LEU GLU ARG MET ASP ILE GLY PRO LYS GLN THR GLN SEQRES 4 B 195 VAL GLY ILE VAL GLN TYR GLY GLU ASN VAL THR HIS GLU SEQRES 5 B 195 PHE ASN LEU ASN LYS TYR SER SER THR GLU GLU VAL LEU SEQRES 6 B 195 VAL ALA ALA LYS LYS ILE VAL GLN ARG GLY GLY ARG GLN SEQRES 7 B 195 THR MET THR ALA LEU GLY ILE ASP THR ALA ARG LYS GLU SEQRES 8 B 195 ALA PHE THR GLU ALA ARG GLY ALA ARG ARG GLY VAL LYS SEQRES 9 B 195 LYS VAL MET VAL ILE VAL THR ASP GLY GLU SER HIS ASP SEQRES 10 B 195 ASN HIS ARG LEU LYS LYS VAL ILE GLN ASP CYS GLU ASP SEQRES 11 B 195 GLU ASN ILE GLN ARG PHE SER ILE ALA ILE LEU GLY SER SEQRES 12 B 195 TYR ASN ARG GLY ASN LEU SER THR GLU LYS PHE VAL GLU SEQRES 13 B 195 GLU ILE LYS SER ILE ALA SER GLU PRO THR GLU LYS HIS SEQRES 14 B 195 PHE PHE ASN VAL SER ASP GLU LEU ALA LEU VAL THR ILE SEQRES 15 B 195 VAL LYS THR LEU GLY GLU ARG ILE PHE ALA LEU GLU ALA HET CA A 601 1 HET CL A 602 1 HET GOL A 603 6 HET CA B 601 1 HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 CA 2(CA 2+) FORMUL 4 CL CL 1- FORMUL 5 GOL C3 H8 O3 FORMUL 7 HOH *460(H2 O) HELIX 1 AA1 TRP A 48 GLU A 60 1 13 HELIX 2 AA2 SER A 91 LYS A 101 1 11 HELIX 3 AA3 MET A 111 GLU A 122 1 12 HELIX 4 AA4 THR A 125 GLY A 129 5 5 HELIX 5 AA5 ASP A 148 HIS A 150 5 3 HELIX 6 AA6 ARG A 151 GLU A 162 1 12 HELIX 7 AA7 LEU A 172 GLY A 178 1 7 HELIX 8 AA8 THR A 182 ALA A 193 1 12 HELIX 9 AA9 PRO A 196 HIS A 200 1 5 HELIX 10 AB1 ASP A 206 THR A 212 5 7 HELIX 11 AB2 ILE A 213 PHE A 222 1 10 HELIX 12 AB3 TRP B 348 GLU B 360 1 13 HELIX 13 AB4 SER B 391 LYS B 401 1 11 HELIX 14 AB5 MET B 411 GLU B 422 1 12 HELIX 15 AB6 THR B 425 GLY B 429 5 5 HELIX 16 AB7 ASP B 448 HIS B 450 5 3 HELIX 17 AB8 ARG B 451 GLU B 462 1 12 HELIX 18 AB9 LEU B 472 GLY B 478 1 7 HELIX 19 AC1 THR B 482 ALA B 493 1 12 HELIX 20 AC2 PRO B 496 HIS B 500 1 5 HELIX 21 AC3 ASP B 506 THR B 512 5 7 HELIX 22 AC4 ILE B 513 ALA B 523 1 11 SHEET 1 AA1 6 VAL A 80 PHE A 84 0 SHEET 2 AA1 6 GLN A 70 TYR A 76 -1 N GLN A 75 O THR A 81 SHEET 3 AA1 6 LEU A 33 ASP A 40 1 N ILE A 37 O VAL A 74 SHEET 4 AA1 6 LYS A 135 THR A 142 1 O VAL A 139 N VAL A 38 SHEET 5 AA1 6 ILE A 164 ILE A 171 1 O PHE A 167 N MET A 138 SHEET 6 AA1 6 PHE A 201 VAL A 204 1 O VAL A 204 N ALA A 170 SHEET 1 AA2 6 VAL B 380 PHE B 384 0 SHEET 2 AA2 6 GLN B 370 TYR B 376 -1 N GLN B 375 O THR B 381 SHEET 3 AA2 6 LEU B 333 ASP B 340 1 N ILE B 335 O GLN B 370 SHEET 4 AA2 6 LYS B 435 THR B 442 1 O VAL B 439 N VAL B 338 SHEET 5 AA2 6 ILE B 464 ILE B 471 1 O GLN B 465 N MET B 438 SHEET 6 AA2 6 PHE B 501 VAL B 504 1 O VAL B 504 N ALA B 470 LINK OG SER A 42 CA CA A 601 1555 1555 2.74 LINK OG SER A 44 CA CA A 601 1555 1555 2.32 LINK OD1 ASP A 143 CA CA A 601 1555 1555 2.40 LINK CA CA A 601 O HOH A 734 1555 1555 2.44 LINK CA CA A 601 O HOH A 748 1555 1555 2.33 LINK CA CA A 601 O HOH A 862 1555 1555 2.45 LINK CA CA A 601 O HOH A 871 1555 1555 2.47 LINK OG SER B 342 CA CA B 601 1555 1555 2.59 LINK OG SER B 344 CA CA B 601 1555 1555 2.37 LINK OD1 ASP B 443 CA CA B 601 1555 1555 2.38 LINK CA CA B 601 O HOH B 735 1555 1555 2.31 LINK CA CA B 601 O HOH B 792 1555 1555 2.35 LINK CA CA B 601 O HOH B 855 1555 1555 2.54 LINK CA CA B 601 O HOH B 867 1555 1555 2.42 CISPEP 1 TYR A 46 PRO A 47 0 -6.25 CISPEP 2 GLU A 195 PRO A 196 0 -2.39 CISPEP 3 TYR B 346 PRO B 347 0 -6.15 CISPEP 4 GLU B 495 PRO B 496 0 -1.34 SITE 1 AC1 7 SER A 42 SER A 44 ASP A 143 HOH A 734 SITE 2 AC1 7 HOH A 748 HOH A 862 HOH A 871 SITE 1 AC2 1 THR A 216 SITE 1 AC3 3 GLU A 122 HOH A 747 HOH A 809 SITE 1 AC4 7 SER B 342 SER B 344 ASP B 443 HOH B 735 SITE 2 AC4 7 HOH B 792 HOH B 855 HOH B 867 CRYST1 37.369 95.950 53.078 90.00 104.00 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026760 0.000000 0.006670 0.00000 SCALE2 0.000000 0.010422 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019417 0.00000