HEADER TRANSFERASE 12-JAN-16 5HIJ TITLE CRYSTAL STRUCTURE OF GLYCINE SARCOSINE N-METHYLTRANSFERASE FROM TITLE 2 METHANOHALOPHILUS PORTUCALENSIS IN COMPLEX WITH BETAINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCINE SARCOSINE N-METHYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.1.1.156; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOHALOPHILUS PORTUCALENSIS FDF-1; SOURCE 3 ORGANISM_TAXID: 523843; SOURCE 4 STRAIN: FDF-1; SOURCE 5 GENE: GSMT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASES (SAM OR ADOMET- KEYWDS 2 MTASE), CLASS I, MONOMETHYLATION OF GLYCINE AND SARCOSINE, RATE- KEYWDS 3 LIMITING ENZYME IN BETAINE BIOSYNTHESIS, BETAINE-MEDIATED FEEDBACK KEYWDS 4 INHIBITION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.R.LEE,T.S.LIN,S.J.LAI,M.S.LIU,M.C.LAI,N.L.CHAN REVDAT 4 15-NOV-23 5HIJ 1 ATOM REVDAT 3 08-NOV-23 5HIJ 1 REMARK REVDAT 2 18-JAN-17 5HIJ 1 JRNL REVDAT 1 23-NOV-16 5HIJ 0 JRNL AUTH Y.R.LEE,T.S.LIN,S.J.LAI,M.S.LIU,M.C.LAI,N.L.CHAN JRNL TITL STRUCTURAL ANALYSIS OF GLYCINE SARCOSINE N-METHYLTRANSFERASE JRNL TITL 2 FROM METHANOHALOPHILUS PORTUCALENSIS REVEALS MECHANISTIC JRNL TITL 3 INSIGHTS INTO THE REGULATION OF METHYLTRANSFERASE ACTIVITY JRNL REF SCI REP V. 6 38071 2016 JRNL REFN ESSN 2045-2322 JRNL PMID 27934872 JRNL DOI 10.1038/SREP38071 REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.72 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 31208 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1571 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.7252 - 4.2796 0.98 2840 149 0.1466 0.1690 REMARK 3 2 4.2796 - 3.4026 1.00 2761 142 0.1393 0.1670 REMARK 3 3 3.4026 - 2.9741 1.00 2725 145 0.1668 0.2253 REMARK 3 4 2.9741 - 2.7029 1.00 2722 146 0.1899 0.2844 REMARK 3 5 2.7029 - 2.5096 1.00 2703 143 0.1908 0.2340 REMARK 3 6 2.5096 - 2.3619 1.00 2710 146 0.1812 0.2176 REMARK 3 7 2.3619 - 2.2438 1.00 2708 144 0.1747 0.2317 REMARK 3 8 2.2438 - 2.1462 1.00 2692 138 0.1718 0.1883 REMARK 3 9 2.1462 - 2.0637 1.00 2697 140 0.1829 0.2465 REMARK 3 10 2.0637 - 1.9926 1.00 2690 137 0.1966 0.2354 REMARK 3 11 1.9926 - 1.9303 0.90 2389 141 0.2162 0.2657 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2014 REMARK 3 ANGLE : 0.964 2720 REMARK 3 CHIRALITY : 0.045 283 REMARK 3 PLANARITY : 0.003 356 REMARK 3 DIHEDRAL : 12.785 728 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 21 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.7312 -16.3924 -27.0515 REMARK 3 T TENSOR REMARK 3 T11: 0.2436 T22: 0.1605 REMARK 3 T33: 0.2362 T12: 0.0002 REMARK 3 T13: -0.0562 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 2.8905 L22: 2.3196 REMARK 3 L33: 7.1748 L12: -1.0542 REMARK 3 L13: -3.4763 L23: 2.2455 REMARK 3 S TENSOR REMARK 3 S11: -0.0970 S12: 0.2504 S13: -0.1172 REMARK 3 S21: -0.1799 S22: 0.0042 S23: 0.1212 REMARK 3 S31: 0.0625 S32: -0.4783 S33: 0.0900 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.9222 -7.1586 -18.1376 REMARK 3 T TENSOR REMARK 3 T11: 0.2149 T22: 0.1078 REMARK 3 T33: 0.1686 T12: 0.0087 REMARK 3 T13: -0.0186 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 2.3381 L22: 2.0153 REMARK 3 L33: 4.7496 L12: 0.3867 REMARK 3 L13: -0.2422 L23: -1.1465 REMARK 3 S TENSOR REMARK 3 S11: -0.0289 S12: -0.0473 S13: 0.0727 REMARK 3 S21: -0.0208 S22: 0.0343 S23: 0.0819 REMARK 3 S31: -0.2022 S32: 0.0082 S33: 0.0081 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 182 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6564 -24.0323 -13.4581 REMARK 3 T TENSOR REMARK 3 T11: 0.1494 T22: 0.2109 REMARK 3 T33: 0.1370 T12: 0.0041 REMARK 3 T13: 0.0011 T23: 0.0434 REMARK 3 L TENSOR REMARK 3 L11: 2.5244 L22: 4.6395 REMARK 3 L33: 5.4516 L12: -0.2376 REMARK 3 L13: 0.0379 L23: 3.7176 REMARK 3 S TENSOR REMARK 3 S11: -0.0469 S12: -0.0607 S13: -0.1896 REMARK 3 S21: 0.2712 S22: 0.0643 S23: 0.0201 REMARK 3 S31: 0.2414 S32: 0.0937 S33: -0.0064 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 183 THROUGH 263 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.8280 -28.6372 -21.0835 REMARK 3 T TENSOR REMARK 3 T11: 0.1855 T22: 0.1893 REMARK 3 T33: 0.2146 T12: -0.0067 REMARK 3 T13: 0.0082 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 1.1854 L22: 1.3620 REMARK 3 L33: 2.5595 L12: -0.1301 REMARK 3 L13: 0.1684 L23: 0.6372 REMARK 3 S TENSOR REMARK 3 S11: -0.0530 S12: -0.0254 S13: -0.1602 REMARK 3 S21: 0.1217 S22: 0.0534 S23: 0.0734 REMARK 3 S31: 0.2123 S32: -0.0696 S33: 0.0033 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HIJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000216151. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL15A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : LN2-COOLED, FIXED-EXIT DOUBLE REMARK 200 CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31210 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.930 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 5HIL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: GSMT (6.6 MG/ML) IN REMARK 280 100 MM TES PH 7.3, 2 M KCL, 1 MM EDTA AND 1 MM 2- REMARK 280 MERCAPTOETHANOL. CRYSTALLIZATION REAGENT: 0.2 M POTASSIUM SODIUM REMARK 280 TARTRATE TETRAHYDRATE, 20% W/V POLYETHYLENE GLYCOL 3,350. REMARK 280 BETAINE WAS SOAKED INTO CRYSTALS BEFORE DATA COLLECTION., VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 26.08800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.27250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 65.68400 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 26.08800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.27250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.68400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 26.08800 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 60.27250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 65.68400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 26.08800 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 60.27250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 65.68400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 434 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 464 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 471 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 505 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 557 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 GLN A 3 REMARK 465 TYR A 4 REMARK 465 GLY A 5 REMARK 465 LYS A 6 REMARK 465 GLN A 7 REMARK 465 ASP A 8 REMARK 465 PHE A 9 REMARK 465 GLY A 10 REMARK 465 ASP A 11 REMARK 465 ASN A 12 REMARK 465 PRO A 13 REMARK 465 ILE A 14 REMARK 465 GLU A 15 REMARK 465 VAL A 16 REMARK 465 ARG A 17 REMARK 465 GLU A 18 REMARK 465 SER A 19 REMARK 465 ASP A 20 REMARK 465 GLY A 176 REMARK 465 TYR A 177 REMARK 465 SER A 178 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 21 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 67 57.15 -140.25 REMARK 500 TRP A 117 66.79 -150.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BET A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HII RELATED DB: PDB REMARK 900 RELATED ID: 5HIK RELATED DB: PDB REMARK 900 RELATED ID: 5HIL RELATED DB: PDB REMARK 900 RELATED ID: 5HIM RELATED DB: PDB REMARK 900 RELATED ID: 5GWX RELATED DB: PDB REMARK 900 RELATED ID: 5H02 RELATED DB: PDB DBREF 5HIJ A 1 263 UNP F6KV61 F6KV61_9EURY 1 263 SEQADV 5HIJ MET A -20 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ GLY A -19 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ SER A -18 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ SER A -17 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ HIS A -16 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ HIS A -15 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ HIS A -14 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ HIS A -13 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ HIS A -12 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ HIS A -11 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ SER A -10 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ SER A -9 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ GLY A -8 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ LEU A -7 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ VAL A -6 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ PRO A -5 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ ARG A -4 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ GLY A -3 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ SER A -2 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ HIS A -1 UNP F6KV61 EXPRESSION TAG SEQADV 5HIJ MET A 0 UNP F6KV61 EXPRESSION TAG SEQRES 1 A 284 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 284 LEU VAL PRO ARG GLY SER HIS MET MET ASN GLN TYR GLY SEQRES 3 A 284 LYS GLN ASP PHE GLY ASP ASN PRO ILE GLU VAL ARG GLU SEQRES 4 A 284 SER ASP HIS TYR GLU GLU GLU TYR VAL LEU GLY PHE VAL SEQRES 5 A 284 ASP LYS TRP ASP GLU LEU ILE ASP TRP GLU SER ARG ALA SEQRES 6 A 284 GLU SER GLU GLY ASP THR ILE ILE ASN ILE LEU LYS GLU SEQRES 7 A 284 ARG GLY VAL LYS LYS VAL LEU ASP VAL ALA THR GLY THR SEQRES 8 A 284 GLY PHE ASN SER VAL ARG LEU LEU GLN ALA GLY PHE ASP SEQRES 9 A 284 VAL VAL SER ALA ASP GLY SER ALA GLU MET LEU VAL LYS SEQRES 10 A 284 ALA PHE ASP ASN ALA ARG ASP HIS GLY TYR LEU MET ARG SEQRES 11 A 284 THR VAL GLN ALA ASP TRP ARG TRP MET ASN LYS ASP ILE SEQRES 12 A 284 HIS ASP LYS PHE ASP ALA ILE VAL CYS LEU GLY ASN SER SEQRES 13 A 284 PHE THR HIS LEU PHE ASP GLU GLY ASP ARG ARG LYS ALA SEQRES 14 A 284 LEU ALA GLU PHE TYR ALA LEU LEU LYS HIS ASP GLY VAL SEQRES 15 A 284 LEU LEU LEU ASP GLN ARG ASN TYR ASP ALA ILE LEU ASP SEQRES 16 A 284 ASP GLY TYR SER SER LYS HIS ALA HIS TYR TYR CYS GLY SEQRES 17 A 284 ASP THR VAL SER VAL TYR PRO GLU HIS VAL ASP GLU GLY SEQRES 18 A 284 LEU ALA ARG PHE LYS TYR GLU PHE SER ASP GLY SER VAL SEQRES 19 A 284 TYR ASN LEU ASN MET PHE PRO LEU ARG LYS ASP TYR THR SEQRES 20 A 284 ARG GLN LEU LEU HIS GLU VAL GLY PHE GLN GLU ILE ASN SEQRES 21 A 284 THR LEU GLY ASP PHE LYS GLU THR TYR LYS GLU ASP GLU SEQRES 22 A 284 PRO ASP PHE PHE LEU HIS VAL ALA GLU LYS ASN HET BET A 301 8 HETNAM BET TRIMETHYL GLYCINE FORMUL 2 BET C5 H12 N O2 1+ FORMUL 3 HOH *190(H2 O) HELIX 1 AA1 HIS A 21 ILE A 38 1 18 HELIX 2 AA2 ASP A 39 GLU A 47 1 9 HELIX 3 AA3 ASP A 49 ARG A 58 1 10 HELIX 4 AA4 GLY A 71 ALA A 80 1 10 HELIX 5 AA5 SER A 90 HIS A 104 1 15 HELIX 6 AA6 ASP A 114 ASP A 121 5 8 HELIX 7 AA7 SER A 135 LEU A 139 5 5 HELIX 8 AA8 ASP A 141 LEU A 155 1 15 HELIX 9 AA9 ASN A 168 ASP A 174 1 7 HELIX 10 AB1 ARG A 222 GLY A 234 1 13 SHEET 1 AA1 7 THR A 110 GLN A 112 0 SHEET 2 AA1 7 ASP A 83 ASP A 88 1 N SER A 86 O VAL A 111 SHEET 3 AA1 7 LYS A 62 ASP A 65 1 N VAL A 63 O ASP A 83 SHEET 4 AA1 7 PHE A 126 CYS A 131 1 O ALA A 128 N LEU A 64 SHEET 5 AA1 7 LEU A 156 ARG A 167 1 O LEU A 163 N CYS A 131 SHEET 6 AA1 7 PHE A 255 GLU A 261 -1 O ALA A 260 N LEU A 162 SHEET 7 AA1 7 GLU A 237 ASP A 243 -1 N LEU A 241 O LEU A 257 SHEET 1 AA2 4 HIS A 183 TYR A 185 0 SHEET 2 AA2 4 VAL A 190 ASP A 198 -1 O VAL A 192 N HIS A 183 SHEET 3 AA2 4 LEU A 201 PHE A 208 -1 O LYS A 205 N TYR A 193 SHEET 4 AA2 4 VAL A 213 MET A 218 -1 O TYR A 214 N TYR A 206 SITE 1 AC1 5 ASP A 35 ASP A 39 TRP A 40 ASN A 100 SITE 2 AC1 5 HOH A 511 CRYST1 52.176 120.545 131.368 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019166 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008296 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007612 0.00000