HEADER TRANSFERASE 14-JAN-16 5HL6 TITLE CRYSTAL STRUCTURE OF A PUTATIVE GAF SENSOR PROTEIN FROM BURKHOLDERIA TITLE 2 VIETNAMIENSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE GAF SENSOR PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: BUVIA.00048.A.B1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA VIETNAMIENSIS (STRAIN G4 / LMG SOURCE 3 22486); SOURCE 4 ORGANISM_TAXID: 269482; SOURCE 5 STRAIN: G4 / LMG 22486; SOURCE 6 GENE: BCEP1808_1068; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: BUVIA.00048.A.B1 KEYWDS SSGCID, BURKHOLDERIA VIETNAMIENSI, STRUCTURAL GENOMICS, SEATTLE KEYWDS 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 27-SEP-23 5HL6 1 REMARK REVDAT 1 27-JAN-16 5HL6 0 JRNL AUTH SSGCID,D.M.DRANOW,S.J.MAYCLIN,D.LORIMER,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE GAF SENSOR PROTEIN FROM JRNL TITL 2 BURKHOLDERIA VIETNAMIENSIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 28073 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1387 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.8210 - 3.9791 0.97 2780 142 0.1530 0.1722 REMARK 3 2 3.9791 - 3.1610 0.99 2703 135 0.1582 0.2226 REMARK 3 3 3.1610 - 2.7622 1.00 2669 145 0.1818 0.2348 REMARK 3 4 2.7622 - 2.5100 1.00 2659 151 0.1835 0.2132 REMARK 3 5 2.5100 - 2.3303 1.00 2674 140 0.1765 0.2394 REMARK 3 6 2.3303 - 2.1930 1.00 2659 128 0.1689 0.1861 REMARK 3 7 2.1930 - 2.0833 1.00 2661 142 0.1777 0.2019 REMARK 3 8 2.0833 - 1.9926 1.00 2624 146 0.1905 0.2575 REMARK 3 9 1.9926 - 1.9160 1.00 2643 115 0.1989 0.2477 REMARK 3 10 1.9160 - 1.8499 1.00 2614 143 0.2214 0.2863 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.23 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2434 REMARK 3 ANGLE : 0.711 3320 REMARK 3 CHIRALITY : 0.048 380 REMARK 3 PLANARITY : 0.005 439 REMARK 3 DIHEDRAL : 13.280 1436 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.8658 27.0580 120.6824 REMARK 3 T TENSOR REMARK 3 T11: 0.2776 T22: 0.1644 REMARK 3 T33: 0.2030 T12: -0.0307 REMARK 3 T13: 0.0366 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 6.3949 L22: 4.8155 REMARK 3 L33: 7.8949 L12: -1.1717 REMARK 3 L13: 5.7208 L23: -2.0205 REMARK 3 S TENSOR REMARK 3 S11: 0.0170 S12: -0.0313 S13: 0.1208 REMARK 3 S21: -0.0248 S22: -0.1545 S23: -0.2846 REMARK 3 S31: 0.1659 S32: 0.0230 S33: 0.1798 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 29 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.8771 19.5961 131.6038 REMARK 3 T TENSOR REMARK 3 T11: 0.2320 T22: 0.1609 REMARK 3 T33: 0.1840 T12: -0.0111 REMARK 3 T13: 0.0016 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 3.2595 L22: 3.9999 REMARK 3 L33: 8.8364 L12: -2.0624 REMARK 3 L13: 4.7973 L23: -1.0589 REMARK 3 S TENSOR REMARK 3 S11: -0.0655 S12: 0.1470 S13: -0.2063 REMARK 3 S21: 0.1250 S22: 0.0351 S23: -0.1750 REMARK 3 S31: -0.2081 S32: 0.4564 S33: 0.0294 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 46 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4340 10.9123 127.8686 REMARK 3 T TENSOR REMARK 3 T11: 0.1434 T22: 0.1122 REMARK 3 T33: 0.1211 T12: -0.0315 REMARK 3 T13: 0.0105 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 3.4742 L22: 8.7497 REMARK 3 L33: 3.1476 L12: -2.8426 REMARK 3 L13: 0.4522 L23: -1.4849 REMARK 3 S TENSOR REMARK 3 S11: 0.0342 S12: 0.0528 S13: 0.0850 REMARK 3 S21: -0.1393 S22: -0.0508 S23: 0.0782 REMARK 3 S31: 0.1041 S32: -0.1622 S33: 0.0119 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 72 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1307 0.9723 128.1480 REMARK 3 T TENSOR REMARK 3 T11: 0.4290 T22: 0.2037 REMARK 3 T33: 0.2891 T12: -0.0481 REMARK 3 T13: 0.0209 T23: -0.0027 REMARK 3 L TENSOR REMARK 3 L11: 2.8677 L22: 2.3744 REMARK 3 L33: 3.8277 L12: -1.5017 REMARK 3 L13: -1.8033 L23: 2.9077 REMARK 3 S TENSOR REMARK 3 S11: 0.0143 S12: 0.1304 S13: -0.0407 REMARK 3 S21: 0.1125 S22: -0.2298 S23: 0.2437 REMARK 3 S31: 0.6797 S32: -0.1830 S33: 0.3234 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9499 4.0343 116.2252 REMARK 3 T TENSOR REMARK 3 T11: 0.4370 T22: 0.1777 REMARK 3 T33: 0.1913 T12: 0.0009 REMARK 3 T13: 0.0181 T23: -0.0369 REMARK 3 L TENSOR REMARK 3 L11: 4.5350 L22: 5.3495 REMARK 3 L33: 4.3093 L12: 1.0803 REMARK 3 L13: 1.4175 L23: -0.6073 REMARK 3 S TENSOR REMARK 3 S11: 0.0936 S12: 0.2513 S13: -0.2340 REMARK 3 S21: -0.8217 S22: -0.0648 S23: -0.2944 REMARK 3 S31: 0.6170 S32: 0.0954 S33: -0.0267 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1484 2.8180 116.0443 REMARK 3 T TENSOR REMARK 3 T11: 0.7249 T22: 0.5649 REMARK 3 T33: 0.5182 T12: -0.2074 REMARK 3 T13: -0.1106 T23: -0.0338 REMARK 3 L TENSOR REMARK 3 L11: 9.5147 L22: 2.5989 REMARK 3 L33: 1.0687 L12: -3.7125 REMARK 3 L13: -0.7242 L23: 1.3600 REMARK 3 S TENSOR REMARK 3 S11: 0.4864 S12: -0.1893 S13: -1.3152 REMARK 3 S21: -0.6619 S22: -0.5957 S23: 1.4513 REMARK 3 S31: 1.3555 S32: -0.4898 S33: -0.0515 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6670 5.3330 123.9067 REMARK 3 T TENSOR REMARK 3 T11: 0.7279 T22: 0.5071 REMARK 3 T33: 0.8961 T12: -0.3249 REMARK 3 T13: -0.1033 T23: 0.0727 REMARK 3 L TENSOR REMARK 3 L11: 1.9537 L22: 0.4245 REMARK 3 L33: 1.7219 L12: -0.8179 REMARK 3 L13: -1.4518 L23: 0.3786 REMARK 3 S TENSOR REMARK 3 S11: -0.2011 S12: -0.0204 S13: -0.8412 REMARK 3 S21: 0.3973 S22: -0.3041 S23: 0.4673 REMARK 3 S31: 0.1077 S32: 0.1513 S33: 0.3532 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0355 8.9456 119.5298 REMARK 3 T TENSOR REMARK 3 T11: 0.2852 T22: 0.1615 REMARK 3 T33: 0.1741 T12: 0.0259 REMARK 3 T13: 0.0781 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 7.3741 L22: 5.6852 REMARK 3 L33: 4.7872 L12: -2.2568 REMARK 3 L13: 0.9858 L23: 0.1830 REMARK 3 S TENSOR REMARK 3 S11: -0.1384 S12: 0.0635 S13: -0.2211 REMARK 3 S21: -0.4429 S22: 0.1338 S23: -0.2734 REMARK 3 S31: 0.4113 S32: 0.5088 S33: -0.0515 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.2649 12.6642 120.0045 REMARK 3 T TENSOR REMARK 3 T11: 0.2346 T22: 0.1351 REMARK 3 T33: 0.1697 T12: -0.0341 REMARK 3 T13: -0.0121 T23: -0.0123 REMARK 3 L TENSOR REMARK 3 L11: 7.5340 L22: 2.4824 REMARK 3 L33: 4.4543 L12: -0.6132 REMARK 3 L13: 2.2636 L23: -0.7123 REMARK 3 S TENSOR REMARK 3 S11: -0.2120 S12: 0.0234 S13: -0.0714 REMARK 3 S21: -0.2825 S22: 0.1787 S23: 0.0756 REMARK 3 S31: 0.1152 S32: -0.3107 S33: 0.0040 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 144 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9344 17.9896 117.4134 REMARK 3 T TENSOR REMARK 3 T11: 0.3262 T22: 0.1599 REMARK 3 T33: 0.2079 T12: -0.0209 REMARK 3 T13: 0.0875 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 8.3518 L22: 2.2263 REMARK 3 L33: 7.5275 L12: 0.4430 REMARK 3 L13: 5.6609 L23: -0.3915 REMARK 3 S TENSOR REMARK 3 S11: -0.1215 S12: 0.3210 S13: 0.0016 REMARK 3 S21: -0.4080 S22: 0.0356 S23: -0.1640 REMARK 3 S31: 0.1644 S32: 0.1783 S33: 0.1005 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.9185 14.2812 128.2906 REMARK 3 T TENSOR REMARK 3 T11: 0.3839 T22: 0.5958 REMARK 3 T33: 0.8111 T12: 0.0718 REMARK 3 T13: 0.0512 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 2.0914 L22: 5.4288 REMARK 3 L33: 4.4461 L12: -0.4493 REMARK 3 L13: -1.0161 L23: 4.7035 REMARK 3 S TENSOR REMARK 3 S11: 0.5141 S12: 0.7395 S13: -0.2852 REMARK 3 S21: -0.1185 S22: 0.3276 S23: -2.9665 REMARK 3 S31: -0.1229 S32: 1.7373 S33: -0.7980 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.7595 11.7415 144.2527 REMARK 3 T TENSOR REMARK 3 T11: 0.4211 T22: 0.5069 REMARK 3 T33: 0.7405 T12: 0.0001 REMARK 3 T13: 0.0529 T23: 0.2064 REMARK 3 L TENSOR REMARK 3 L11: 9.8211 L22: 8.2912 REMARK 3 L33: 5.6463 L12: 4.4409 REMARK 3 L13: 7.0752 L23: 5.0601 REMARK 3 S TENSOR REMARK 3 S11: 0.9447 S12: -0.6955 S13: -1.4695 REMARK 3 S21: -0.7403 S22: 0.2928 S23: -1.0773 REMARK 3 S31: 0.3593 S32: -0.3706 S33: -1.1363 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.8434 6.4153 148.1045 REMARK 3 T TENSOR REMARK 3 T11: 0.1894 T22: 0.3657 REMARK 3 T33: 0.3080 T12: -0.0473 REMARK 3 T13: 0.0213 T23: 0.0236 REMARK 3 L TENSOR REMARK 3 L11: 5.1726 L22: 6.6389 REMARK 3 L33: 8.5402 L12: -4.8240 REMARK 3 L13: -5.8252 L23: 4.6153 REMARK 3 S TENSOR REMARK 3 S11: -0.1477 S12: -0.3801 S13: -0.7218 REMARK 3 S21: 0.2172 S22: 0.0521 S23: 0.7311 REMARK 3 S31: 0.4811 S32: -0.5538 S33: 0.1974 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 28 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7085 17.8055 144.4642 REMARK 3 T TENSOR REMARK 3 T11: 0.1871 T22: 0.1453 REMARK 3 T33: 0.1566 T12: 0.0265 REMARK 3 T13: -0.0194 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 1.6611 L22: 2.9720 REMARK 3 L33: 3.3843 L12: 0.2916 REMARK 3 L13: 0.4235 L23: -0.3130 REMARK 3 S TENSOR REMARK 3 S11: -0.2138 S12: -0.1305 S13: 0.2092 REMARK 3 S21: 0.0837 S22: 0.0660 S23: 0.0631 REMARK 3 S31: -0.2457 S32: -0.0758 S33: 0.1436 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 98 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3860 31.6670 145.1719 REMARK 3 T TENSOR REMARK 3 T11: 0.6981 T22: 0.4112 REMARK 3 T33: 0.5279 T12: 0.0407 REMARK 3 T13: -0.0328 T23: -0.1024 REMARK 3 L TENSOR REMARK 3 L11: 7.2398 L22: 6.6288 REMARK 3 L33: 8.3007 L12: 4.3647 REMARK 3 L13: 6.6036 L23: 1.3854 REMARK 3 S TENSOR REMARK 3 S11: -0.6618 S12: -0.1321 S13: 0.7553 REMARK 3 S21: -0.3605 S22: 0.9282 S23: -0.7539 REMARK 3 S31: -2.4099 S32: 0.0937 S33: -0.3936 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 115 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8267 16.4389 151.3218 REMARK 3 T TENSOR REMARK 3 T11: 0.2369 T22: 0.2458 REMARK 3 T33: 0.1598 T12: 0.0454 REMARK 3 T13: 0.0054 T23: -0.0335 REMARK 3 L TENSOR REMARK 3 L11: 3.8448 L22: 4.9772 REMARK 3 L33: 2.5614 L12: -2.5115 REMARK 3 L13: 1.0541 L23: -0.4429 REMARK 3 S TENSOR REMARK 3 S11: -0.1734 S12: -0.4383 S13: 0.0511 REMARK 3 S21: 0.2512 S22: 0.0829 S23: 0.2512 REMARK 3 S31: -0.1591 S32: -0.5234 S33: 0.0817 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 161 THROUGH 169 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1057 1.5807 148.8676 REMARK 3 T TENSOR REMARK 3 T11: 0.3595 T22: 0.2380 REMARK 3 T33: 0.2287 T12: -0.0013 REMARK 3 T13: 0.0113 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: 9.1352 L22: 4.5900 REMARK 3 L33: 5.5184 L12: -6.2509 REMARK 3 L13: -4.5055 L23: 2.6966 REMARK 3 S TENSOR REMARK 3 S11: 0.3541 S12: -0.0758 S13: -0.1656 REMARK 3 S21: -0.1983 S22: 0.0151 S23: -0.4749 REMARK 3 S31: -0.0541 S32: 0.3059 S33: -0.3694 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HL6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217243. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28101 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.849 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.8200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.60400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.230 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: 3KSF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BUVIA.00048.A.B1.PS02344 AT 57.5 MG/ML REMARK 280 WAS MIXED 1:1 WITH JCSG+(C1): 20% PEG-8000, 100 MM SODIUM REMARK 280 PHOSPHATE DIBASIC/ CITRIC ACID, PH = 4.2, 200 MM NACL, AND REMARK 280 CRYOPROTECTED WITH 20% ETHYLENE GLYCOL, PH 4.2, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.10000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.53500 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.10000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 51.53500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 PHE A 2 REMARK 465 THR A 3 REMARK 465 LEU A 4 REMARK 465 SER A 5 REMARK 465 THR A 6 REMARK 465 ASP A 7 REMARK 465 PRO A 8 REMARK 465 HIS A 9 REMARK 465 ARG A 168 REMARK 465 ALA A 169 REMARK 465 ALA A 170 REMARK 465 MET B -7 REMARK 465 ALA B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 PHE B 2 REMARK 465 HIS B 101 REMARK 465 ALA B 102 REMARK 465 PHE B 103 REMARK 465 PRO B 104 REMARK 465 GLY B 105 REMARK 465 HIS B 106 REMARK 465 ALA B 170 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 28 CG CD OE1 OE2 REMARK 470 LYS A 72 CG CD CE NZ REMARK 470 HIS A 101 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 159 CG CD OE1 OE2 REMARK 470 ARG A 166 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 15 CG CD1 CD2 REMARK 470 LYS B 72 CG CD CE NZ REMARK 470 LYS B 82 CG CD CE NZ REMARK 470 ARG B 98 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 100 CG1 CG2 REMARK 470 ILE B 107 CG1 CG2 CD1 REMARK 470 ASP B 110 CG OD1 OD2 REMARK 470 SER B 113 OG REMARK 470 GLU B 159 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 155 O HOH A 201 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 74 -143.17 -135.32 REMARK 500 ASP A 143 -166.63 -125.68 REMARK 500 ALA A 161 -57.74 -120.47 REMARK 500 LEU B 4 81.90 68.51 REMARK 500 ALA B 74 -135.32 -126.05 REMARK 500 ALA B 108 165.03 68.95 REMARK 500 ALA B 161 -57.66 -125.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-BUVIA.00048.A RELATED DB: TARGETTRACK DBREF 5HL6 A 1 170 UNP A4JCS6 A4JCS6_BURVG 1 170 DBREF 5HL6 B 1 170 UNP A4JCS6 A4JCS6_BURVG 1 170 SEQADV 5HL6 MET A -7 UNP A4JCS6 INITIATING METHIONINE SEQADV 5HL6 ALA A -6 UNP A4JCS6 EXPRESSION TAG SEQADV 5HL6 HIS A -5 UNP A4JCS6 EXPRESSION TAG SEQADV 5HL6 HIS A -4 UNP A4JCS6 EXPRESSION TAG SEQADV 5HL6 HIS A -3 UNP A4JCS6 EXPRESSION TAG SEQADV 5HL6 HIS A -2 UNP A4JCS6 EXPRESSION TAG SEQADV 5HL6 HIS A -1 UNP A4JCS6 EXPRESSION TAG SEQADV 5HL6 HIS A 0 UNP A4JCS6 EXPRESSION TAG SEQADV 5HL6 MET B -7 UNP A4JCS6 INITIATING METHIONINE SEQADV 5HL6 ALA B -6 UNP A4JCS6 EXPRESSION TAG SEQADV 5HL6 HIS B -5 UNP A4JCS6 EXPRESSION TAG SEQADV 5HL6 HIS B -4 UNP A4JCS6 EXPRESSION TAG SEQADV 5HL6 HIS B -3 UNP A4JCS6 EXPRESSION TAG SEQADV 5HL6 HIS B -2 UNP A4JCS6 EXPRESSION TAG SEQADV 5HL6 HIS B -1 UNP A4JCS6 EXPRESSION TAG SEQADV 5HL6 HIS B 0 UNP A4JCS6 EXPRESSION TAG SEQRES 1 A 178 MET ALA HIS HIS HIS HIS HIS HIS MET PHE THR LEU SER SEQRES 2 A 178 THR ASP PRO HIS ALA SER LYS ALA GLU LEU TYR ALA THR SEQRES 3 A 178 LEU ALA GLU GLN ALA ARG SER LEU VAL GLU SER GLU PRO SEQRES 4 A 178 ASP LEU ILE ALA ASN ALA ALA ASN PHE SER ALA LEU VAL SEQRES 5 A 178 TYR HIS SER LEU ASP ARG LEU ASN TRP ALA GLY PHE TYR SEQRES 6 A 178 PHE PHE ASP GLY THR GLU LEU VAL VAL GLY PRO PHE GLN SEQRES 7 A 178 GLY LYS PRO ALA CYS VAL ARG ILE ALA LEU GLY LYS GLY SEQRES 8 A 178 VAL CYS GLY THR ALA ALA GLN THR ARG GLN THR GLN VAL SEQRES 9 A 178 VAL ARG ASP VAL HIS ALA PHE PRO GLY HIS ILE ALA CYS SEQRES 10 A 178 ASP ALA ALA SER GLU SER GLU ILE VAL VAL PRO LEU VAL SEQRES 11 A 178 ALA ALA ASP GLY THR LEU ILE GLY VAL TRP ASP VAL ASP SEQRES 12 A 178 SER PRO VAL ALA ALA ARG PHE ASP ASP GLU ASP ARG SER SEQRES 13 A 178 GLY MET GLU ALA LEU CYS ARG VAL PHE VAL GLU HIS ALA SEQRES 14 A 178 TRP GLN LYS ALA ARG ASP ARG ALA ALA SEQRES 1 B 178 MET ALA HIS HIS HIS HIS HIS HIS MET PHE THR LEU SER SEQRES 2 B 178 THR ASP PRO HIS ALA SER LYS ALA GLU LEU TYR ALA THR SEQRES 3 B 178 LEU ALA GLU GLN ALA ARG SER LEU VAL GLU SER GLU PRO SEQRES 4 B 178 ASP LEU ILE ALA ASN ALA ALA ASN PHE SER ALA LEU VAL SEQRES 5 B 178 TYR HIS SER LEU ASP ARG LEU ASN TRP ALA GLY PHE TYR SEQRES 6 B 178 PHE PHE ASP GLY THR GLU LEU VAL VAL GLY PRO PHE GLN SEQRES 7 B 178 GLY LYS PRO ALA CYS VAL ARG ILE ALA LEU GLY LYS GLY SEQRES 8 B 178 VAL CYS GLY THR ALA ALA GLN THR ARG GLN THR GLN VAL SEQRES 9 B 178 VAL ARG ASP VAL HIS ALA PHE PRO GLY HIS ILE ALA CYS SEQRES 10 B 178 ASP ALA ALA SER GLU SER GLU ILE VAL VAL PRO LEU VAL SEQRES 11 B 178 ALA ALA ASP GLY THR LEU ILE GLY VAL TRP ASP VAL ASP SEQRES 12 B 178 SER PRO VAL ALA ALA ARG PHE ASP ASP GLU ASP ARG SER SEQRES 13 B 178 GLY MET GLU ALA LEU CYS ARG VAL PHE VAL GLU HIS ALA SEQRES 14 B 178 TRP GLN LYS ALA ARG ASP ARG ALA ALA HET EDO B 201 4 HET EDO B 202 4 HET EDO B 203 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 3(C2 H6 O2) FORMUL 6 HOH *188(H2 O) HELIX 1 AA1 SER A 11 SER A 29 1 19 HELIX 2 AA2 ASP A 32 HIS A 46 1 15 HELIX 3 AA3 LYS A 82 ARG A 92 1 11 HELIX 4 AA4 ASP A 99 PHE A 103 5 5 HELIX 5 AA5 ILE A 107 ALA A 111 5 5 HELIX 6 AA6 ASP A 143 ALA A 161 1 19 HELIX 7 AA7 ALA A 161 ASP A 167 1 7 HELIX 8 AA8 SER B 11 GLU B 28 1 18 HELIX 9 AA9 ASP B 32 LEU B 48 1 17 HELIX 10 AB1 LYS B 82 ARG B 92 1 11 HELIX 11 AB2 ASP B 143 ALA B 161 1 19 HELIX 12 AB3 ALA B 161 ALA B 169 1 9 SHEET 1 AA1 6 ARG A 77 ILE A 78 0 SHEET 2 AA1 6 LEU A 64 GLY A 71 -1 N LEU A 64 O ILE A 78 SHEET 3 AA1 6 TRP A 53 PHE A 59 -1 N PHE A 56 O GLY A 67 SHEET 4 AA1 6 LEU A 128 SER A 136 -1 O ASP A 133 N GLY A 55 SHEET 5 AA1 6 SER A 115 VAL A 122 -1 N LEU A 121 O GLY A 130 SHEET 6 AA1 6 GLN A 95 VAL A 97 -1 N VAL A 97 O GLU A 116 SHEET 1 AA2 6 ARG B 77 ILE B 78 0 SHEET 2 AA2 6 LEU B 64 GLN B 70 -1 N LEU B 64 O ILE B 78 SHEET 3 AA2 6 TRP B 53 PHE B 59 -1 N PHE B 58 O VAL B 65 SHEET 4 AA2 6 LEU B 128 SER B 136 -1 O ASP B 133 N GLY B 55 SHEET 5 AA2 6 SER B 115 VAL B 122 -1 N LEU B 121 O GLY B 130 SHEET 6 AA2 6 GLN B 95 VAL B 97 -1 N VAL B 97 O GLU B 116 SSBOND 1 CYS A 75 CYS A 109 1555 1555 2.03 SSBOND 2 CYS B 75 CYS B 109 1555 1555 2.03 CISPEP 1 ALA B 108 CYS B 109 0 -2.39 SITE 1 AC1 5 TYR B 45 HIS B 46 LEU B 48 ARG B 50 SITE 2 AC1 5 LEU B 51 SITE 1 AC2 5 PHE B 59 ARG B 92 THR B 127 LEU B 128 SITE 2 AC2 5 HOH B 350 SITE 1 AC3 5 THR B 6 PRO B 8 TRP B 162 ARG B 166 SITE 2 AC3 5 HOH B 368 CRYST1 44.460 70.200 103.070 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022492 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014245 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009702 0.00000