HEADER METAL TRANSPORT 19-JAN-16 5HOK TITLE MAMB-CTD MUTANT - D247A COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAGNETOSOME PROTEIN MAMB; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MAGNETOSPIRA SP. QH-2; SOURCE 3 ORGANISM_TAXID: 1288970; SOURCE 4 GENE: MAMB, MGMAQ_1061; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS C-TERMINAL DOMAIN, MAGNETOTACTIC BACTERIA, METALLOCHAPERONE LIKE KEYWDS 2 DOMAIN, CATION DIFFUSION FACILITATOR, METAL-BINDING SITE, METAL KEYWDS 3 TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR N.KEREN,N.ZEYTUNI,R.ZARIVACH REVDAT 3 10-JAN-24 5HOK 1 LINK REVDAT 2 14-FEB-18 5HOK 1 JRNL REMARK REVDAT 1 01-FEB-17 5HOK 0 JRNL AUTH R.UEBE,N.KEREN-KHADMY,N.ZEYTUNI,E.KATZMANN,Y.NAVON, JRNL AUTH 2 G.DAVIDOV,R.BITTON,J.M.PLITZKO,D.SCHULER,R.ZARIVACH JRNL TITL THE DUAL ROLE OF MAMB IN MAGNETOSOME MEMBRANE ASSEMBLY AND JRNL TITL 2 MAGNETITE BIOMINERALIZATION. JRNL REF MOL. MICROBIOL. V. 107 542 2018 JRNL REFN ESSN 1365-2958 JRNL PMID 29243866 JRNL DOI 10.1111/MMI.13899 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 68.26 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 37264 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1911 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2563 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE SET COUNT : 157 REMARK 3 BIN FREE R VALUE : 0.3230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2619 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 302 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.02000 REMARK 3 B22 (A**2) : -0.15000 REMARK 3 B33 (A**2) : 1.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.119 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.119 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.091 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.706 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2772 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2711 ; 0.010 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3787 ; 1.648 ; 1.915 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6184 ; 1.903 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 359 ; 5.942 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 150 ;36.404 ;23.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 464 ;13.365 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;23.892 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 443 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3204 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 677 ; 0.007 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1359 ; 2.609 ; 1.225 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1358 ; 2.584 ; 1.224 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1700 ; 3.621 ; 1.817 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1701 ; 3.620 ; 1.817 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1413 ; 5.004 ; 1.875 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1414 ; 5.002 ; 1.875 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2073 ; 7.328 ; 2.579 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3290 ;10.117 ;12.944 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3083 ;10.201 ;11.418 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 6 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 210 291 B 210 291 9436 0.10 0.05 REMARK 3 2 A 210 289 C 210 289 8964 0.13 0.05 REMARK 3 3 A 210 291 D 210 291 9172 0.13 0.05 REMARK 3 4 B 210 289 C 210 289 9100 0.12 0.05 REMARK 3 5 B 209 292 D 209 292 9040 0.15 0.05 REMARK 3 6 C 210 289 D 210 289 9028 0.12 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 210 A 292 REMARK 3 ORIGIN FOR THE GROUP (A): -21.2140 3.0660 -36.1960 REMARK 3 T TENSOR REMARK 3 T11: 0.0697 T22: 0.0100 REMARK 3 T33: 0.0291 T12: 0.0069 REMARK 3 T13: 0.0018 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 2.4575 L22: 3.2543 REMARK 3 L33: 2.7735 L12: 0.9236 REMARK 3 L13: 0.2415 L23: -0.8444 REMARK 3 S TENSOR REMARK 3 S11: 0.0794 S12: 0.0918 S13: -0.1848 REMARK 3 S21: -0.0863 S22: -0.0772 S23: -0.2071 REMARK 3 S31: -0.0426 S32: 0.0779 S33: -0.0022 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 209 B 292 REMARK 3 ORIGIN FOR THE GROUP (A): -16.4770 3.3260 -13.8010 REMARK 3 T TENSOR REMARK 3 T11: 0.1331 T22: 0.0194 REMARK 3 T33: 0.0447 T12: -0.0133 REMARK 3 T13: -0.0162 T23: 0.0174 REMARK 3 L TENSOR REMARK 3 L11: 1.9653 L22: 1.8522 REMARK 3 L33: 2.0023 L12: -0.6861 REMARK 3 L13: 0.0988 L23: 0.0126 REMARK 3 S TENSOR REMARK 3 S11: 0.1065 S12: -0.0847 S13: -0.0348 REMARK 3 S21: 0.0618 S22: -0.0677 S23: 0.0747 REMARK 3 S31: -0.0238 S32: -0.0068 S33: -0.0388 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 210 C 290 REMARK 3 ORIGIN FOR THE GROUP (A): -0.6800 -11.0540 -7.6020 REMARK 3 T TENSOR REMARK 3 T11: 0.1301 T22: 0.0526 REMARK 3 T33: 0.0598 T12: 0.0175 REMARK 3 T13: -0.0028 T23: 0.0357 REMARK 3 L TENSOR REMARK 3 L11: 2.3160 L22: 2.5223 REMARK 3 L33: 3.1369 L12: -1.3000 REMARK 3 L13: 1.4050 L23: -1.2907 REMARK 3 S TENSOR REMARK 3 S11: 0.1096 S12: 0.3333 S13: 0.1762 REMARK 3 S21: -0.1349 S22: -0.1695 S23: -0.1560 REMARK 3 S31: 0.1127 S32: 0.2385 S33: 0.0599 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 209 D 292 REMARK 3 ORIGIN FOR THE GROUP (A): -20.1650 12.4670 5.7160 REMARK 3 T TENSOR REMARK 3 T11: 0.0898 T22: 0.0266 REMARK 3 T33: 0.1007 T12: -0.0073 REMARK 3 T13: 0.0186 T23: 0.0293 REMARK 3 L TENSOR REMARK 3 L11: 1.0589 L22: 2.6993 REMARK 3 L33: 3.4918 L12: 0.5969 REMARK 3 L13: -0.7127 L23: -1.2710 REMARK 3 S TENSOR REMARK 3 S11: 0.0841 S12: -0.1018 S13: -0.0271 REMARK 3 S21: 0.0639 S22: -0.0879 S23: -0.1399 REMARK 3 S31: -0.1715 S32: 0.2232 S33: 0.0038 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.10 REMARK 3 ION PROBE RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 1.00 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5HOK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217438. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.27 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37264 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 68.260 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5HO5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3,350, 0.1 M TRIS PH 8, 0.2 M REMARK 280 MGCL2, PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.61950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.36200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.16900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.36200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.61950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.16900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -55.85850 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -48.36200 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -55.85850 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 48.36200 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 209 REMARK 465 ALA A 293 REMARK 465 ALA B 293 REMARK 465 GLY C 209 REMARK 465 ILE C 291 REMARK 465 ALA C 292 REMARK 465 ALA C 293 REMARK 465 ALA D 293 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 371 O HOH B 472 1.12 REMARK 500 O HOH A 312 O HOH B 401 1.39 REMARK 500 NH1 ARG D 269 O HOH D 301 2.06 REMARK 500 OE2 GLU B 275 O HOH B 401 2.09 REMARK 500 OD1 ASP D 243 O HOH D 302 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 253 CB - CG - OD1 ANGL. DEV. = 7.0 DEGREES REMARK 500 ARG A 270 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ASP B 253 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP C 253 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP D 253 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG D 270 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 280 -95.91 -102.47 REMARK 500 HIS B 278 5.74 81.15 REMARK 500 HIS C 228 1.31 80.17 REMARK 500 HIS D 228 -1.34 79.75 REMARK 500 ARG D 280 -95.90 -100.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 273 O REMARK 620 2 HOH B 439 O 72.7 REMARK 620 3 HOH B 459 O 90.4 83.3 REMARK 620 4 GLU C 273 O 53.2 19.8 87.3 REMARK 620 5 HOH C 325 O 108.1 174.0 90.7 161.1 REMARK 620 6 HOH C 353 O 89.3 90.8 173.9 87.6 95.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 301 DBREF 5HOK A 213 293 UNP W6KHH6 W6KHH6_9PROT 213 293 DBREF 5HOK B 213 293 UNP W6KHH6 W6KHH6_9PROT 213 293 DBREF 5HOK C 213 293 UNP W6KHH6 W6KHH6_9PROT 213 293 DBREF 5HOK D 213 293 UNP W6KHH6 W6KHH6_9PROT 213 293 SEQADV 5HOK GLY A 209 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK SER A 210 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK HIS A 211 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK MET A 212 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK ALA A 247 UNP W6KHH6 ASP 247 ENGINEERED MUTATION SEQADV 5HOK GLY B 209 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK SER B 210 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK HIS B 211 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK MET B 212 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK ALA B 247 UNP W6KHH6 ASP 247 ENGINEERED MUTATION SEQADV 5HOK GLY C 209 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK SER C 210 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK HIS C 211 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK MET C 212 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK ALA C 247 UNP W6KHH6 ASP 247 ENGINEERED MUTATION SEQADV 5HOK GLY D 209 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK SER D 210 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK HIS D 211 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK MET D 212 UNP W6KHH6 EXPRESSION TAG SEQADV 5HOK ALA D 247 UNP W6KHH6 ASP 247 ENGINEERED MUTATION SEQRES 1 A 85 GLY SER HIS MET ASN ASP VAL LEU VAL ASP ALA TYR ASN SEQRES 2 A 85 ILE ALA LYS ASP SER GLN HIS VAL HIS GLY VAL HIS TYR SEQRES 3 A 85 ILE ARG GLY ARG ASN VAL GLY GLU ASP VAL HIS LEU ALA SEQRES 4 A 85 ILE ASN ILE TYR VAL ASP ALA ASP LEU LYS VAL PHE GLU SEQRES 5 A 85 SER ASP LEU VAL ALA ASP ALA ILE ARG ARG LYS ILE GLU SEQRES 6 A 85 ALA GLU VAL ASP HIS VAL ARG ASP VAL HIS VAL GLY VAL SEQRES 7 A 85 THR PRO VAL ARG ILE ALA ALA SEQRES 1 B 85 GLY SER HIS MET ASN ASP VAL LEU VAL ASP ALA TYR ASN SEQRES 2 B 85 ILE ALA LYS ASP SER GLN HIS VAL HIS GLY VAL HIS TYR SEQRES 3 B 85 ILE ARG GLY ARG ASN VAL GLY GLU ASP VAL HIS LEU ALA SEQRES 4 B 85 ILE ASN ILE TYR VAL ASP ALA ASP LEU LYS VAL PHE GLU SEQRES 5 B 85 SER ASP LEU VAL ALA ASP ALA ILE ARG ARG LYS ILE GLU SEQRES 6 B 85 ALA GLU VAL ASP HIS VAL ARG ASP VAL HIS VAL GLY VAL SEQRES 7 B 85 THR PRO VAL ARG ILE ALA ALA SEQRES 1 C 85 GLY SER HIS MET ASN ASP VAL LEU VAL ASP ALA TYR ASN SEQRES 2 C 85 ILE ALA LYS ASP SER GLN HIS VAL HIS GLY VAL HIS TYR SEQRES 3 C 85 ILE ARG GLY ARG ASN VAL GLY GLU ASP VAL HIS LEU ALA SEQRES 4 C 85 ILE ASN ILE TYR VAL ASP ALA ASP LEU LYS VAL PHE GLU SEQRES 5 C 85 SER ASP LEU VAL ALA ASP ALA ILE ARG ARG LYS ILE GLU SEQRES 6 C 85 ALA GLU VAL ASP HIS VAL ARG ASP VAL HIS VAL GLY VAL SEQRES 7 C 85 THR PRO VAL ARG ILE ALA ALA SEQRES 1 D 85 GLY SER HIS MET ASN ASP VAL LEU VAL ASP ALA TYR ASN SEQRES 2 D 85 ILE ALA LYS ASP SER GLN HIS VAL HIS GLY VAL HIS TYR SEQRES 3 D 85 ILE ARG GLY ARG ASN VAL GLY GLU ASP VAL HIS LEU ALA SEQRES 4 D 85 ILE ASN ILE TYR VAL ASP ALA ASP LEU LYS VAL PHE GLU SEQRES 5 D 85 SER ASP LEU VAL ALA ASP ALA ILE ARG ARG LYS ILE GLU SEQRES 6 D 85 ALA GLU VAL ASP HIS VAL ARG ASP VAL HIS VAL GLY VAL SEQRES 7 D 85 THR PRO VAL ARG ILE ALA ALA HET MG B 301 1 HETNAM MG MAGNESIUM ION FORMUL 5 MG MG 2+ FORMUL 6 HOH *302(H2 O) HELIX 1 AA1 HIS A 211 ASP A 225 1 15 HELIX 2 AA2 LYS A 257 VAL A 276 1 20 HELIX 3 AA3 HIS B 211 ASP B 225 1 15 HELIX 4 AA4 LYS B 257 VAL B 276 1 20 HELIX 5 AA5 HIS C 211 ASP C 225 1 15 HELIX 6 AA6 LYS C 257 VAL C 276 1 20 HELIX 7 AA7 HIS D 211 ASP D 225 1 15 HELIX 8 AA8 LYS D 257 VAL D 276 1 20 SHEET 1 AA1 3 GLY A 231 VAL A 240 0 SHEET 2 AA1 3 ASP A 243 ASP A 253 -1 O ASP A 243 N VAL A 240 SHEET 3 AA1 3 VAL A 279 VAL A 289 1 O ARG A 280 N VAL A 244 SHEET 1 AA2 6 VAL B 279 VAL B 289 0 SHEET 2 AA2 6 ASP B 243 ASP B 253 1 N ILE B 250 O THR B 287 SHEET 3 AA2 6 GLY B 231 VAL B 240 -1 N VAL B 240 O ASP B 243 SHEET 4 AA2 6 GLY C 231 VAL C 240 -1 O ASN C 239 N HIS B 233 SHEET 5 AA2 6 ASP C 243 ASP C 253 -1 O ASP C 243 N VAL C 240 SHEET 6 AA2 6 VAL C 279 VAL C 289 1 O GLY C 285 N ILE C 248 SHEET 1 AA3 3 GLY D 231 VAL D 240 0 SHEET 2 AA3 3 ASP D 243 ASP D 253 -1 O ASP D 243 N VAL D 240 SHEET 3 AA3 3 VAL D 279 VAL D 289 1 O ARG D 280 N VAL D 244 LINK O GLU B 273 MG MG B 301 1555 1555 2.32 LINK MG MG B 301 O HOH B 439 1555 1555 2.47 LINK MG MG B 301 O HOH B 459 1555 1555 2.18 LINK MG MG B 301 O GLU C 273 1655 1555 2.31 LINK MG MG B 301 O HOH C 325 1555 1455 2.05 LINK MG MG B 301 O HOH C 353 1555 1455 2.20 SITE 1 AC1 6 GLU B 273 HOH B 439 HOH B 459 GLU C 273 SITE 2 AC1 6 HOH C 325 HOH C 353 CRYST1 37.239 96.338 96.724 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026854 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010380 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010339 0.00000