data_5HPG # _entry.id 5HPG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5HPG pdb_00005hpg 10.2210/pdb5hpg/pdb WWPDB D_1000179725 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-03-25 2 'Structure model' 1 1 2008-03-25 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-09 5 'Structure model' 1 4 2024-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_initial_refinement_model 3 4 'Structure model' struct_ref_seq_dif 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' pdbx_entry_details 7 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5HPG _pdbx_database_status.recvd_initial_deposition_date 1997-09-19 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tulinsky, A.' 1 'Mochalkin, I.' 2 'Castellino, F.J.' 3 # _citation.id primary _citation.title 'Structure and ligand binding determinants of the recombinant kringle 5 domain of human plasminogen.' _citation.journal_abbrev Biochemistry _citation.journal_volume 37 _citation.page_first 3258 _citation.page_last 3271 _citation.year 1998 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9521645 _citation.pdbx_database_id_DOI 10.1021/bi972284e # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chang, Y.' 1 ? primary 'Mochalkin, I.' 2 ? primary 'McCance, S.G.' 3 ? primary 'Cheng, B.' 4 ? primary 'Tulinsky, A.' 5 ? primary 'Castellino, F.J.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man PLASMINOGEN 9394.440 2 3.4.21.7 ? 'KRINGLE 5' ? 2 water nat water 18.015 193 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DCMFGNGKGYRGKRVTTVTGTPCQDWAAQEPHRHSIFTPETNPRAGLEKNYCRNPDGDVGGPWCYTTNPRKLYDYCDVPQ CAAP ; _entity_poly.pdbx_seq_one_letter_code_can ;DCMFGNGKGYRGKRVTTVTGTPCQDWAAQEPHRHSIFTPETNPRAGLEKNYCRNPDGDVGGPWCYTTNPRKLYDYCDVPQ CAAP ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 CYS n 1 3 MET n 1 4 PHE n 1 5 GLY n 1 6 ASN n 1 7 GLY n 1 8 LYS n 1 9 GLY n 1 10 TYR n 1 11 ARG n 1 12 GLY n 1 13 LYS n 1 14 ARG n 1 15 VAL n 1 16 THR n 1 17 THR n 1 18 VAL n 1 19 THR n 1 20 GLY n 1 21 THR n 1 22 PRO n 1 23 CYS n 1 24 GLN n 1 25 ASP n 1 26 TRP n 1 27 ALA n 1 28 ALA n 1 29 GLN n 1 30 GLU n 1 31 PRO n 1 32 HIS n 1 33 ARG n 1 34 HIS n 1 35 SER n 1 36 ILE n 1 37 PHE n 1 38 THR n 1 39 PRO n 1 40 GLU n 1 41 THR n 1 42 ASN n 1 43 PRO n 1 44 ARG n 1 45 ALA n 1 46 GLY n 1 47 LEU n 1 48 GLU n 1 49 LYS n 1 50 ASN n 1 51 TYR n 1 52 CYS n 1 53 ARG n 1 54 ASN n 1 55 PRO n 1 56 ASP n 1 57 GLY n 1 58 ASP n 1 59 VAL n 1 60 GLY n 1 61 GLY n 1 62 PRO n 1 63 TRP n 1 64 CYS n 1 65 TYR n 1 66 THR n 1 67 THR n 1 68 ASN n 1 69 PRO n 1 70 ARG n 1 71 LYS n 1 72 LEU n 1 73 TYR n 1 74 ASP n 1 75 TYR n 1 76 CYS n 1 77 ASP n 1 78 VAL n 1 79 PRO n 1 80 GLN n 1 81 CYS n 1 82 ALA n 1 83 ALA n 1 84 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 0 0 ASP ASP A . n A 1 2 CYS 2 1 1 CYS CYS A . n A 1 3 MET 3 2 2 MET MET A . n A 1 4 PHE 4 3 3 PHE PHE A . n A 1 5 GLY 5 4 4 GLY GLY A . n A 1 6 ASN 6 5 5 ASN ASN A . n A 1 7 GLY 7 6 6 GLY GLY A . n A 1 8 LYS 8 7 7 LYS LYS A . n A 1 9 GLY 9 8 8 GLY GLY A . n A 1 10 TYR 10 9 9 TYR TYR A . n A 1 11 ARG 11 10 10 ARG ARG A . n A 1 12 GLY 12 11 11 GLY GLY A . n A 1 13 LYS 13 12 12 LYS LYS A . n A 1 14 ARG 14 13 13 ARG ARG A . n A 1 15 VAL 15 14 14 VAL VAL A . n A 1 16 THR 16 15 15 THR THR A . n A 1 17 THR 17 16 16 THR THR A . n A 1 18 VAL 18 17 17 VAL VAL A . n A 1 19 THR 19 18 18 THR THR A . n A 1 20 GLY 20 19 19 GLY GLY A . n A 1 21 THR 21 20 20 THR THR A . n A 1 22 PRO 22 21 21 PRO PRO A . n A 1 23 CYS 23 22 22 CYS CYS A . n A 1 24 GLN 24 23 23 GLN GLN A . n A 1 25 ASP 25 24 24 ASP ASP A . n A 1 26 TRP 26 25 25 TRP TRP A . n A 1 27 ALA 27 26 26 ALA ALA A . n A 1 28 ALA 28 27 27 ALA ALA A . n A 1 29 GLN 29 28 28 GLN GLN A . n A 1 30 GLU 30 29 29 GLU GLU A . n A 1 31 PRO 31 30 30 PRO PRO A . n A 1 32 HIS 32 31 31 HIS HIS A . n A 1 33 ARG 33 32 32 ARG ARG A . n A 1 34 HIS 34 33 33 HIS HIS A . n A 1 35 SER 35 34 34 SER SER A . n A 1 36 ILE 36 35 35 ILE ILE A . n A 1 37 PHE 37 36 36 PHE PHE A . n A 1 38 THR 38 37 37 THR THR A . n A 1 39 PRO 39 38 38 PRO PRO A . n A 1 40 GLU 40 39 39 GLU GLU A . n A 1 41 THR 41 40 40 THR THR A . n A 1 42 ASN 42 41 41 ASN ASN A . n A 1 43 PRO 43 42 42 PRO PRO A . n A 1 44 ARG 44 43 43 ARG ARG A . n A 1 45 ALA 45 44 44 ALA ALA A . n A 1 46 GLY 46 45 45 GLY GLY A . n A 1 47 LEU 47 46 46 LEU LEU A . n A 1 48 GLU 48 47 47 GLU GLU A . n A 1 49 LYS 49 48 48 LYS LYS A . n A 1 50 ASN 50 49 49 ASN ASN A . n A 1 51 TYR 51 50 50 TYR TYR A . n A 1 52 CYS 52 51 51 CYS CYS A . n A 1 53 ARG 53 52 52 ARG ARG A . n A 1 54 ASN 54 53 53 ASN ASN A . n A 1 55 PRO 55 54 54 PRO PRO A . n A 1 56 ASP 56 55 55 ASP ASP A . n A 1 57 GLY 57 56 56 GLY GLY A . n A 1 58 ASP 58 57 57 ASP ASP A . n A 1 59 VAL 59 58 58 VAL VAL A . n A 1 60 GLY 60 59 59 GLY GLY A . n A 1 61 GLY 61 60 60 GLY GLY A . n A 1 62 PRO 62 61 61 PRO PRO A . n A 1 63 TRP 63 62 62 TRP TRP A . n A 1 64 CYS 64 63 63 CYS CYS A . n A 1 65 TYR 65 64 64 TYR TYR A . n A 1 66 THR 66 65 65 THR THR A . n A 1 67 THR 67 66 66 THR THR A . n A 1 68 ASN 68 67 67 ASN ASN A . n A 1 69 PRO 69 68 68 PRO PRO A . n A 1 70 ARG 70 69 69 ARG ARG A . n A 1 71 LYS 71 70 70 LYS LYS A . n A 1 72 LEU 72 71 71 LEU LEU A . n A 1 73 TYR 73 72 72 TYR TYR A . n A 1 74 ASP 74 73 73 ASP ASP A . n A 1 75 TYR 75 74 74 TYR TYR A . n A 1 76 CYS 76 75 75 CYS CYS A . n A 1 77 ASP 77 76 76 ASP ASP A . n A 1 78 VAL 78 77 77 VAL VAL A . n A 1 79 PRO 79 78 78 PRO PRO A . n A 1 80 GLN 80 79 79 GLN GLN A . n A 1 81 CYS 81 80 80 CYS CYS A . n A 1 82 ALA 82 81 81 ALA ALA A . n A 1 83 ALA 83 82 82 ALA ALA A . n A 1 84 PRO 84 83 83 PRO PRO A . n B 1 1 ASP 1 0 0 ASP ASP B . n B 1 2 CYS 2 1 1 CYS CYS B . n B 1 3 MET 3 2 2 MET MET B . n B 1 4 PHE 4 3 3 PHE PHE B . n B 1 5 GLY 5 4 4 GLY GLY B . n B 1 6 ASN 6 5 5 ASN ASN B . n B 1 7 GLY 7 6 6 GLY GLY B . n B 1 8 LYS 8 7 7 LYS LYS B . n B 1 9 GLY 9 8 8 GLY GLY B . n B 1 10 TYR 10 9 9 TYR TYR B . n B 1 11 ARG 11 10 10 ARG ARG B . n B 1 12 GLY 12 11 11 GLY GLY B . n B 1 13 LYS 13 12 12 LYS LYS B . n B 1 14 ARG 14 13 13 ARG ARG B . n B 1 15 VAL 15 14 14 VAL VAL B . n B 1 16 THR 16 15 15 THR THR B . n B 1 17 THR 17 16 16 THR THR B . n B 1 18 VAL 18 17 17 VAL VAL B . n B 1 19 THR 19 18 18 THR THR B . n B 1 20 GLY 20 19 19 GLY GLY B . n B 1 21 THR 21 20 20 THR THR B . n B 1 22 PRO 22 21 21 PRO PRO B . n B 1 23 CYS 23 22 22 CYS CYS B . n B 1 24 GLN 24 23 23 GLN GLN B . n B 1 25 ASP 25 24 24 ASP ASP B . n B 1 26 TRP 26 25 25 TRP TRP B . n B 1 27 ALA 27 26 26 ALA ALA B . n B 1 28 ALA 28 27 27 ALA ALA B . n B 1 29 GLN 29 28 28 GLN GLN B . n B 1 30 GLU 30 29 29 GLU GLU B . n B 1 31 PRO 31 30 30 PRO PRO B . n B 1 32 HIS 32 31 31 HIS HIS B . n B 1 33 ARG 33 32 32 ARG ARG B . n B 1 34 HIS 34 33 33 HIS HIS B . n B 1 35 SER 35 34 34 SER SER B . n B 1 36 ILE 36 35 35 ILE ILE B . n B 1 37 PHE 37 36 36 PHE PHE B . n B 1 38 THR 38 37 37 THR THR B . n B 1 39 PRO 39 38 38 PRO PRO B . n B 1 40 GLU 40 39 39 GLU GLU B . n B 1 41 THR 41 40 40 THR THR B . n B 1 42 ASN 42 41 41 ASN ASN B . n B 1 43 PRO 43 42 42 PRO PRO B . n B 1 44 ARG 44 43 43 ARG ARG B . n B 1 45 ALA 45 44 44 ALA ALA B . n B 1 46 GLY 46 45 45 GLY GLY B . n B 1 47 LEU 47 46 46 LEU LEU B . n B 1 48 GLU 48 47 47 GLU GLU B . n B 1 49 LYS 49 48 48 LYS LYS B . n B 1 50 ASN 50 49 49 ASN ASN B . n B 1 51 TYR 51 50 50 TYR TYR B . n B 1 52 CYS 52 51 51 CYS CYS B . n B 1 53 ARG 53 52 52 ARG ARG B . n B 1 54 ASN 54 53 53 ASN ASN B . n B 1 55 PRO 55 54 54 PRO PRO B . n B 1 56 ASP 56 55 55 ASP ASP B . n B 1 57 GLY 57 56 56 GLY GLY B . n B 1 58 ASP 58 57 57 ASP ASP B . n B 1 59 VAL 59 58 58 VAL VAL B . n B 1 60 GLY 60 59 59 GLY GLY B . n B 1 61 GLY 61 60 60 GLY GLY B . n B 1 62 PRO 62 61 61 PRO PRO B . n B 1 63 TRP 63 62 62 TRP TRP B . n B 1 64 CYS 64 63 63 CYS CYS B . n B 1 65 TYR 65 64 64 TYR TYR B . n B 1 66 THR 66 65 65 THR THR B . n B 1 67 THR 67 66 66 THR THR B . n B 1 68 ASN 68 67 67 ASN ASN B . n B 1 69 PRO 69 68 68 PRO PRO B . n B 1 70 ARG 70 69 69 ARG ARG B . n B 1 71 LYS 71 70 70 LYS LYS B . n B 1 72 LEU 72 71 71 LEU LEU B . n B 1 73 TYR 73 72 72 TYR TYR B . n B 1 74 ASP 74 73 73 ASP ASP B . n B 1 75 TYR 75 74 74 TYR TYR B . n B 1 76 CYS 76 75 75 CYS CYS B . n B 1 77 ASP 77 76 76 ASP ASP B . n B 1 78 VAL 78 77 77 VAL VAL B . n B 1 79 PRO 79 78 78 PRO PRO B . n B 1 80 GLN 80 79 79 GLN GLN B . n B 1 81 CYS 81 80 80 CYS CYS B . n B 1 82 ALA 82 81 81 ALA ALA B . n B 1 83 ALA 83 82 82 ALA ALA B . n B 1 84 PRO 84 83 83 PRO PRO B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 401 401 HOH HOH A . C 2 HOH 2 402 402 HOH HOH A . C 2 HOH 3 403 403 HOH HOH A . C 2 HOH 4 404 404 HOH HOH A . C 2 HOH 5 405 405 HOH HOH A . C 2 HOH 6 406 406 HOH HOH A . C 2 HOH 7 407 407 HOH HOH A . C 2 HOH 8 409 409 HOH HOH A . C 2 HOH 9 410 410 HOH HOH A . C 2 HOH 10 411 411 HOH HOH A . C 2 HOH 11 417 417 HOH HOH A . C 2 HOH 12 419 419 HOH HOH A . C 2 HOH 13 420 420 HOH HOH A . C 2 HOH 14 422 422 HOH HOH A . C 2 HOH 15 427 427 HOH HOH A . C 2 HOH 16 428 428 HOH HOH A . C 2 HOH 17 430 430 HOH HOH A . C 2 HOH 18 432 432 HOH HOH A . C 2 HOH 19 434 434 HOH HOH A . C 2 HOH 20 435 435 HOH HOH A . C 2 HOH 21 436 436 HOH HOH A . C 2 HOH 22 439 439 HOH HOH A . C 2 HOH 23 440 440 HOH HOH A . C 2 HOH 24 441 441 HOH HOH A . C 2 HOH 25 444 444 HOH HOH A . C 2 HOH 26 446 446 HOH HOH A . C 2 HOH 27 447 447 HOH HOH A . C 2 HOH 28 448 448 HOH HOH A . C 2 HOH 29 449 449 HOH HOH A . C 2 HOH 30 453 453 HOH HOH A . C 2 HOH 31 458 458 HOH HOH A . C 2 HOH 32 459 459 HOH HOH A . C 2 HOH 33 461 461 HOH HOH A . C 2 HOH 34 467 467 HOH HOH A . C 2 HOH 35 471 471 HOH HOH A . C 2 HOH 36 474 474 HOH HOH A . C 2 HOH 37 475 475 HOH HOH A . C 2 HOH 38 478 478 HOH HOH A . C 2 HOH 39 481 481 HOH HOH A . C 2 HOH 40 482 482 HOH HOH A . C 2 HOH 41 484 484 HOH HOH A . C 2 HOH 42 486 486 HOH HOH A . C 2 HOH 43 489 489 HOH HOH A . C 2 HOH 44 491 491 HOH HOH A . C 2 HOH 45 498 498 HOH HOH A . C 2 HOH 46 500 500 HOH HOH A . C 2 HOH 47 502 502 HOH HOH A . C 2 HOH 48 504 504 HOH HOH A . C 2 HOH 49 506 506 HOH HOH A . C 2 HOH 50 507 507 HOH HOH A . C 2 HOH 51 508 508 HOH HOH A . C 2 HOH 52 510 510 HOH HOH A . C 2 HOH 53 511 511 HOH HOH A . C 2 HOH 54 512 512 HOH HOH A . C 2 HOH 55 513 513 HOH HOH A . C 2 HOH 56 514 514 HOH HOH A . C 2 HOH 57 515 515 HOH HOH A . C 2 HOH 58 516 516 HOH HOH A . C 2 HOH 59 517 517 HOH HOH A . C 2 HOH 60 519 519 HOH HOH A . C 2 HOH 61 522 522 HOH HOH A . C 2 HOH 62 523 523 HOH HOH A . C 2 HOH 63 524 524 HOH HOH A . C 2 HOH 64 525 525 HOH HOH A . C 2 HOH 65 526 526 HOH HOH A . C 2 HOH 66 527 527 HOH HOH A . C 2 HOH 67 528 528 HOH HOH A . C 2 HOH 68 529 529 HOH HOH A . C 2 HOH 69 530 530 HOH HOH A . C 2 HOH 70 531 531 HOH HOH A . C 2 HOH 71 532 532 HOH HOH A . C 2 HOH 72 533 533 HOH HOH A . C 2 HOH 73 534 534 HOH HOH A . C 2 HOH 74 535 535 HOH HOH A . C 2 HOH 75 536 536 HOH HOH A . C 2 HOH 76 537 537 HOH HOH A . C 2 HOH 77 538 538 HOH HOH A . C 2 HOH 78 539 539 HOH HOH A . C 2 HOH 79 540 540 HOH HOH A . C 2 HOH 80 541 541 HOH HOH A . C 2 HOH 81 542 542 HOH HOH A . C 2 HOH 82 545 545 HOH HOH A . C 2 HOH 83 546 546 HOH HOH A . C 2 HOH 84 548 548 HOH HOH A . C 2 HOH 85 549 549 HOH HOH A . C 2 HOH 86 550 550 HOH HOH A . C 2 HOH 87 555 555 HOH HOH A . C 2 HOH 88 561 561 HOH HOH A . C 2 HOH 89 562 562 HOH HOH A . C 2 HOH 90 563 563 HOH HOH A . C 2 HOH 91 564 564 HOH HOH A . C 2 HOH 92 565 565 HOH HOH A . C 2 HOH 93 566 566 HOH HOH A . C 2 HOH 94 567 567 HOH HOH A . C 2 HOH 95 574 574 HOH HOH A . C 2 HOH 96 588 588 HOH HOH A . C 2 HOH 97 589 589 HOH HOH A . D 2 HOH 1 400 400 HOH HOH B . D 2 HOH 2 408 408 HOH HOH B . D 2 HOH 3 412 412 HOH HOH B . D 2 HOH 4 413 413 HOH HOH B . D 2 HOH 5 414 414 HOH HOH B . D 2 HOH 6 415 415 HOH HOH B . D 2 HOH 7 416 416 HOH HOH B . D 2 HOH 8 418 418 HOH HOH B . D 2 HOH 9 421 421 HOH HOH B . D 2 HOH 10 423 423 HOH HOH B . D 2 HOH 11 424 424 HOH HOH B . D 2 HOH 12 425 425 HOH HOH B . D 2 HOH 13 426 426 HOH HOH B . D 2 HOH 14 429 429 HOH HOH B . D 2 HOH 15 431 431 HOH HOH B . D 2 HOH 16 433 433 HOH HOH B . D 2 HOH 17 437 437 HOH HOH B . D 2 HOH 18 438 438 HOH HOH B . D 2 HOH 19 442 442 HOH HOH B . D 2 HOH 20 443 443 HOH HOH B . D 2 HOH 21 445 445 HOH HOH B . D 2 HOH 22 450 450 HOH HOH B . D 2 HOH 23 451 451 HOH HOH B . D 2 HOH 24 452 452 HOH HOH B . D 2 HOH 25 454 454 HOH HOH B . D 2 HOH 26 455 455 HOH HOH B . D 2 HOH 27 456 456 HOH HOH B . D 2 HOH 28 457 457 HOH HOH B . D 2 HOH 29 460 460 HOH HOH B . D 2 HOH 30 462 462 HOH HOH B . D 2 HOH 31 463 463 HOH HOH B . D 2 HOH 32 464 464 HOH HOH B . D 2 HOH 33 465 465 HOH HOH B . D 2 HOH 34 466 466 HOH HOH B . D 2 HOH 35 468 468 HOH HOH B . D 2 HOH 36 469 469 HOH HOH B . D 2 HOH 37 470 470 HOH HOH B . D 2 HOH 38 472 472 HOH HOH B . D 2 HOH 39 473 473 HOH HOH B . D 2 HOH 40 476 476 HOH HOH B . D 2 HOH 41 477 477 HOH HOH B . D 2 HOH 42 479 479 HOH HOH B . D 2 HOH 43 480 480 HOH HOH B . D 2 HOH 44 483 483 HOH HOH B . D 2 HOH 45 485 485 HOH HOH B . D 2 HOH 46 487 487 HOH HOH B . D 2 HOH 47 488 488 HOH HOH B . D 2 HOH 48 490 490 HOH HOH B . D 2 HOH 49 492 492 HOH HOH B . D 2 HOH 50 493 493 HOH HOH B . D 2 HOH 51 494 494 HOH HOH B . D 2 HOH 52 495 495 HOH HOH B . D 2 HOH 53 496 496 HOH HOH B . D 2 HOH 54 497 497 HOH HOH B . D 2 HOH 55 499 499 HOH HOH B . D 2 HOH 56 501 501 HOH HOH B . D 2 HOH 57 503 503 HOH HOH B . D 2 HOH 58 505 505 HOH HOH B . D 2 HOH 59 509 509 HOH HOH B . D 2 HOH 60 518 518 HOH HOH B . D 2 HOH 61 520 520 HOH HOH B . D 2 HOH 62 521 521 HOH HOH B . D 2 HOH 63 543 543 HOH HOH B . D 2 HOH 64 544 544 HOH HOH B . D 2 HOH 65 547 547 HOH HOH B . D 2 HOH 66 551 551 HOH HOH B . D 2 HOH 67 552 552 HOH HOH B . D 2 HOH 68 553 553 HOH HOH B . D 2 HOH 69 554 554 HOH HOH B . D 2 HOH 70 556 556 HOH HOH B . D 2 HOH 71 557 557 HOH HOH B . D 2 HOH 72 558 558 HOH HOH B . D 2 HOH 73 559 559 HOH HOH B . D 2 HOH 74 560 560 HOH HOH B . D 2 HOH 75 568 568 HOH HOH B . D 2 HOH 76 569 569 HOH HOH B . D 2 HOH 77 570 570 HOH HOH B . D 2 HOH 78 571 571 HOH HOH B . D 2 HOH 79 572 572 HOH HOH B . D 2 HOH 80 573 573 HOH HOH B . D 2 HOH 81 575 575 HOH HOH B . D 2 HOH 82 576 576 HOH HOH B . D 2 HOH 83 577 577 HOH HOH B . D 2 HOH 84 578 578 HOH HOH B . D 2 HOH 85 579 579 HOH HOH B . D 2 HOH 86 580 580 HOH HOH B . D 2 HOH 87 581 581 HOH HOH B . D 2 HOH 88 582 582 HOH HOH B . D 2 HOH 89 583 583 HOH HOH B . D 2 HOH 90 584 584 HOH HOH B . D 2 HOH 91 585 585 HOH HOH B . D 2 HOH 92 586 586 HOH HOH B . D 2 HOH 93 587 587 HOH HOH B . D 2 HOH 94 590 590 HOH HOH B . D 2 HOH 95 591 591 HOH HOH B . D 2 HOH 96 592 592 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 43 ? NE ? A ARG 44 NE 2 1 Y 1 A ARG 43 ? CZ ? A ARG 44 CZ 3 1 Y 1 A ARG 43 ? NH1 ? A ARG 44 NH1 4 1 Y 1 A ARG 43 ? NH2 ? A ARG 44 NH2 5 1 Y 1 A GLU 47 ? CG ? A GLU 48 CG 6 1 Y 1 A GLU 47 ? CD ? A GLU 48 CD 7 1 Y 1 A GLU 47 ? OE1 ? A GLU 48 OE1 8 1 Y 1 A GLU 47 ? OE2 ? A GLU 48 OE2 9 1 Y 1 A LYS 48 ? CE ? A LYS 49 CE 10 1 Y 1 A LYS 48 ? NZ ? A LYS 49 NZ 11 1 Y 1 B ARG 43 ? NE ? B ARG 44 NE 12 1 Y 1 B ARG 43 ? CZ ? B ARG 44 CZ 13 1 Y 1 B ARG 43 ? NH1 ? B ARG 44 NH1 14 1 Y 1 B ARG 43 ? NH2 ? B ARG 44 NH2 15 1 Y 1 B GLU 47 ? CD ? B GLU 48 CD 16 1 Y 1 B GLU 47 ? OE1 ? B GLU 48 OE1 17 1 Y 1 B GLU 47 ? OE2 ? B GLU 48 OE2 18 1 Y 1 B LYS 48 ? NZ ? B LYS 49 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal RIGAKU 'data collection' R-AXIS ? 1 RIGAKU 'data reduction' R-AXIS ? 2 AMoRE phasing . ? 3 PROFFT refinement . ? 4 R-AXIS 'data reduction' '(RIGAKU)' ? 5 R-AXIS 'data scaling' '(RIGAKU)' ? 6 # _cell.entry_id 5HPG _cell.length_a 77.430 _cell.length_b 79.200 _cell.length_c 30.780 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HPG _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # _exptl.entry_id 5HPG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.51 _exptl_crystal.density_percent_sol 42. _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '24% (W/V) PEG 8000, 0.1 M NA-HEPES, PH 7.0, 0.15 M LI2(SO4)' # _diffrn.id 1 _diffrn.ambient_temp 123 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS II' _diffrn_detector.pdbx_collection_date 1997-04 _diffrn_detector.details 'MSC-YALE MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH2R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 5HPG _reflns.observed_criterion_sigma_I 2. _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 35.26 _reflns.d_resolution_high 1.66 _reflns.number_obs 16720 _reflns.number_all ? _reflns.percent_possible_obs 72. _reflns.pdbx_Rmerge_I_obs 0.042 _reflns.pdbx_Rsym_value 0.051 _reflns.pdbx_netI_over_sigmaI 14. _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.5 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 37. _reflns_shell.Rmerge_I_obs 0.087 _reflns_shell.pdbx_Rsym_value 0.13 _reflns_shell.meanI_over_sigI_obs 3.6 _reflns_shell.pdbx_redundancy 2.5 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 5HPG _refine.ls_number_reflns_obs 15014 _refine.ls_number_reflns_all 16720 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 7.0 _refine.ls_d_res_high 1.66 _refine.ls_percent_reflns_obs 84. _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.166 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 15.4 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1PKR' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1296 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 193 _refine_hist.number_atoms_total 1489 _refine_hist.d_res_high 1.66 _refine_hist.d_res_low 7.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.016 0.020 ? ? 'X-RAY DIFFRACTION' ? p_angle_d 0.034 0.040 ? ? 'X-RAY DIFFRACTION' ? p_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_d 0.050 0.040 ? ? 'X-RAY DIFFRACTION' ? p_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? p_plane_restr ? ? ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr 0.160 0.150 ? ? 'X-RAY DIFFRACTION' ? p_singtor_nbd 0.18 0.80 ? ? 'X-RAY DIFFRACTION' ? p_multtor_nbd 0.24 0.80 ? ? 'X-RAY DIFFRACTION' ? p_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_xyhbond_nbd 0.23 0.80 ? ? 'X-RAY DIFFRACTION' ? p_planar_tor 5.2 3.0 ? ? 'X-RAY DIFFRACTION' ? p_staggered_tor 17.8 15.0 ? ? 'X-RAY DIFFRACTION' ? p_orthonormal_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_transverse_tor 22.4 20.0 ? ? 'X-RAY DIFFRACTION' ? p_special_tor ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] -0.847210 _struct_ncs_oper.matrix[1][2] -0.074010 _struct_ncs_oper.matrix[1][3] -0.526070 _struct_ncs_oper.matrix[2][1] -0.030510 _struct_ncs_oper.matrix[2][2] -0.981840 _struct_ncs_oper.matrix[2][3] 0.187260 _struct_ncs_oper.matrix[3][1] -0.530370 _struct_ncs_oper.matrix[3][2] 0.174700 _struct_ncs_oper.matrix[3][3] 0.829570 _struct_ncs_oper.vector[1] 31.74900 _struct_ncs_oper.vector[2] 53.68800 _struct_ncs_oper.vector[3] 3.80200 # _database_PDB_matrix.entry_id 5HPG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 5HPG _struct.title 'STRUCTURE AND LIGAND DETERMINANTS OF THE RECOMBINANT KRINGLE 5 DOMAIN OF HUMAN PLASMINOGEN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5HPG _struct_keywords.pdbx_keywords 'SERINE PROTEASE' _struct_keywords.text 'SERINE PROTEASE, KRINGLE 5, HUMAN PLASMINOGEN, FIBRINOLYSIS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PLMN_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00747 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGASLFSVTKKQLGAGSIEECAAKCEEDEEFTCRAFQYHSKEQQCVIMAENR KSSIIIRMRDVVLFEKKVYLSECKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDPQ GPWCYTTDPEKRYDYCDILECEEECMHCSGENYDGKISKTMSGLECQAWDSQSPHAHGYIPSKFPNKNLKKNYCRNPDRE LRPWCFTTDPNKRWELCDIPRCTTPPPSSGPTYQCLKGTGENYRGNVAVTVSGHTCQHWSAQTPHTHNRTPENFPCKNLD ENYCRNPDGKRAPWCHTTNSQVRWEYCKIPSCDSSPVSTEQLAPTAPPELTPVVQDCYHGDGQSYRGTSSTTTTGKKCQS WSSMTPHRHQKTPENYPNAGLTMNYCRNPDADKGPWCFTTDPSVRWEYCNLKKCSGTEASVVAPPPVVLLPDVETPSEED CMFGNGKGYRGKRATTVTGTPCQDWAAQEPHRHSIFTPETNPRAGLEKNYCRNPDGDVGGPWCYTTNPRKLYDYCDVPQC AAPSFDCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAH QEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQ LPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFV TWIEGVMRNN ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5HPG A 1 ? 84 ? P00747 480 ? 563 ? 0 83 2 1 5HPG B 1 ? 84 ? P00747 480 ? 563 ? 0 83 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5HPG VAL A 15 ? UNP P00747 ALA 494 conflict 14 1 2 5HPG VAL B 15 ? UNP P00747 ALA 494 conflict 14 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 81 SG ? ? A CYS 1 A CYS 80 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf2 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 64 SG ? ? A CYS 22 A CYS 63 1_555 ? ? ? ? ? ? ? 2.084 ? ? disulf3 disulf ? ? A CYS 52 SG ? ? ? 1_555 A CYS 76 SG ? ? A CYS 51 A CYS 75 1_555 ? ? ? ? ? ? ? 2.048 ? ? disulf4 disulf ? ? B CYS 2 SG ? ? ? 1_555 B CYS 81 SG ? ? B CYS 1 B CYS 80 1_555 ? ? ? ? ? ? ? 2.022 ? ? disulf5 disulf ? ? B CYS 23 SG ? ? ? 1_555 B CYS 64 SG ? ? B CYS 22 B CYS 63 1_555 ? ? ? ? ? ? ? 2.062 ? ? disulf6 disulf ? ? B CYS 52 SG ? ? ? 1_555 B CYS 76 SG ? ? B CYS 51 B CYS 75 1_555 ? ? ? ? ? ? ? 2.071 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 2 ? CYS A 81 ? CYS A 1 ? 1_555 CYS A 80 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 23 ? CYS A 64 ? CYS A 22 ? 1_555 CYS A 63 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 52 ? CYS A 76 ? CYS A 51 ? 1_555 CYS A 75 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 2 ? CYS B 81 ? CYS B 1 ? 1_555 CYS B 80 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS B 23 ? CYS B 64 ? CYS B 22 ? 1_555 CYS B 63 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS B 52 ? CYS B 76 ? CYS B 51 ? 1_555 CYS B 75 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLU 30 A . ? GLU 29 A PRO 31 A ? PRO 30 A 1 2.58 2 GLU 30 B . ? GLU 29 B PRO 31 B ? PRO 30 B 1 -2.20 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TRP A 63 ? TYR A 65 ? TRP A 62 TYR A 64 A 2 TYR A 73 ? TYR A 75 ? TYR A 72 TYR A 74 B 1 TRP B 63 ? TYR B 65 ? TRP B 62 TYR B 64 B 2 TYR B 73 ? TYR B 75 ? TYR B 72 TYR B 74 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O CYS A 64 ? O CYS A 63 N ASP A 74 ? N ASP A 73 B 1 2 O CYS B 64 ? O CYS B 63 N ASP B 74 ? N ASP B 73 # _struct_site.id LBS _struct_site.pdbx_evidence_code Unknown _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'LYSINE BINDING SITE.' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 LBS 4 ASP A 56 ? ASP A 55 . ? 1_555 ? 2 LBS 4 ASP A 58 ? ASP A 57 . ? 1_555 ? 3 LBS 4 ASP B 56 ? ASP B 55 . ? 1_555 ? 4 LBS 4 ASP B 58 ? ASP B 57 . ? 1_555 ? # _pdbx_entry_details.entry_id 5HPG _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 10 ? ? CZ A ARG 10 ? ? NH1 A ARG 10 ? ? 124.06 120.30 3.76 0.50 N 2 1 CG A GLU 29 ? ? CD A GLU 29 ? ? OE2 A GLU 29 ? ? 131.09 118.30 12.79 2.00 N 3 1 NE A ARG 32 ? ? CZ A ARG 32 ? ? NH1 A ARG 32 ? ? 123.35 120.30 3.05 0.50 N 4 1 NE A ARG 52 ? ? CZ A ARG 52 ? ? NH1 A ARG 52 ? ? 123.68 120.30 3.38 0.50 N 5 1 NE A ARG 52 ? ? CZ A ARG 52 ? ? NH2 A ARG 52 ? ? 116.98 120.30 -3.32 0.50 N 6 1 CB A ASP 57 ? ? CG A ASP 57 ? ? OD1 A ASP 57 ? ? 126.43 118.30 8.13 0.90 N 7 1 NE A ARG 69 ? ? CZ A ARG 69 ? ? NH1 A ARG 69 ? ? 123.97 120.30 3.67 0.50 N 8 1 CB A TYR 74 ? ? CG A TYR 74 ? ? CD2 A TYR 74 ? ? 117.24 121.00 -3.76 0.60 N 9 1 NE B ARG 10 ? ? CZ B ARG 10 ? ? NH2 B ARG 10 ? ? 116.91 120.30 -3.39 0.50 N 10 1 CD B ARG 32 ? ? NE B ARG 32 ? ? CZ B ARG 32 ? ? 132.19 123.60 8.59 1.40 N 11 1 NE B ARG 32 ? ? CZ B ARG 32 ? ? NH1 B ARG 32 ? ? 124.16 120.30 3.86 0.50 N 12 1 NE B ARG 69 ? ? CZ B ARG 69 ? ? NH2 B ARG 69 ? ? 124.02 120.30 3.72 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 48 ? ? 59.19 -124.75 2 1 VAL B 14 ? ? -142.78 21.52 3 1 LYS B 48 ? ? 43.67 -131.04 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 69 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.203 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 ARG A 43 ? ? -14.36 2 1 CYS A 75 ? ? -13.22 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1PKR _pdbx_initial_refinement_model.details 'PDB ENTRY 1PKR' # _atom_sites.entry_id 5HPG _atom_sites.fract_transf_matrix[1][1] 0.012915 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012626 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.032489 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_