HEADER TRANSFERASE 21-JAN-16 5HQ8 TITLE CO-CRYSTAL STRUCTURE OF HUMAN SMYD3 WITH A MEKK2 PEPTIDE AT 2.13A COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE-LYSINE N-METHYLTRANSFERASE SMYD3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SET AND MYND DOMAIN-CONTAINING PROTEIN 3,ZINC FINGER MYND COMPND 5 DOMAIN-CONTAINING PROTEIN 1; COMPND 6 EC: 2.1.1.43; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: MEKK2 PEPTIDE; COMPND 10 CHAIN: I, J; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SMYD3, ZMYND1, ZNFN3A1; SOURCE 6 EXPRESSION_SYSTEM: UNIDENTIFIED BACULOVIRUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10469; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS SMYD3, METHYLTRANSFERASE, ONCOLOGY, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.A.ELKINS,W.G.BONNETTE REVDAT 5 23-OCT-24 5HQ8 1 REMARK REVDAT 4 06-MAR-24 5HQ8 1 JRNL REMARK LINK REVDAT 3 18-MAY-16 5HQ8 1 JRNL REVDAT 2 27-APR-16 5HQ8 1 JRNL REVDAT 1 30-MAR-16 5HQ8 0 JRNL AUTH G.S.VAN ALLER,A.P.GRAVES,P.A.ELKINS,W.G.BONNETTE, JRNL AUTH 2 P.J.MCDEVITT,F.ZAPPACOSTA,R.S.ANNAN,T.W.DEAN,D.S.SU, JRNL AUTH 3 C.L.CARPENTER,H.P.MOHAMMAD,R.G.KRUGER JRNL TITL STRUCTURE-BASED DESIGN OF A NOVEL SMYD3 INHIBITOR THAT JRNL TITL 2 BRIDGES THE SAM-AND MEKK2-BINDING POCKETS. JRNL REF STRUCTURE V. 24 774 2016 JRNL REFN ISSN 0969-2126 JRNL PMID 27066749 JRNL DOI 10.1016/J.STR.2016.03.010 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1801 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 110414 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 5551 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.4326 - 5.3286 0.98 3489 187 0.1531 0.1840 REMARK 3 2 5.3286 - 4.2358 0.99 3530 185 0.1361 0.1481 REMARK 3 3 4.2358 - 3.7022 1.00 3501 177 0.1409 0.1588 REMARK 3 4 3.7022 - 3.3645 1.00 3525 173 0.1641 0.1780 REMARK 3 5 3.3645 - 3.1238 1.00 3493 182 0.1765 0.2217 REMARK 3 6 3.1238 - 2.9399 1.00 3503 193 0.1857 0.2144 REMARK 3 7 2.9399 - 2.7929 1.00 3480 184 0.1827 0.2084 REMARK 3 8 2.7929 - 2.6715 1.00 3545 170 0.1816 0.2104 REMARK 3 9 2.6715 - 2.5687 1.00 3507 171 0.1862 0.2071 REMARK 3 10 2.5687 - 2.4802 1.00 3518 188 0.1822 0.2103 REMARK 3 11 2.4802 - 2.4027 1.00 3484 177 0.1819 0.2078 REMARK 3 12 2.4027 - 2.3340 1.00 3490 183 0.1783 0.2108 REMARK 3 13 2.3340 - 2.2726 1.00 3459 203 0.1744 0.2141 REMARK 3 14 2.2726 - 2.2172 1.00 3490 193 0.1738 0.1986 REMARK 3 15 2.2172 - 2.1668 1.00 3510 195 0.1776 0.2068 REMARK 3 16 2.1668 - 2.1208 1.00 3445 179 0.1843 0.2305 REMARK 3 17 2.1208 - 2.0783 1.00 3539 179 0.1827 0.2191 REMARK 3 18 2.0783 - 2.0391 1.00 3495 179 0.1818 0.2192 REMARK 3 19 2.0391 - 2.0027 1.00 3496 206 0.2019 0.2084 REMARK 3 20 2.0027 - 1.9688 1.00 3442 184 0.1959 0.2241 REMARK 3 21 1.9688 - 1.9371 1.00 3542 183 0.1937 0.2426 REMARK 3 22 1.9371 - 1.9073 1.00 3466 180 0.1941 0.2279 REMARK 3 23 1.9073 - 1.8792 1.00 3488 188 0.2061 0.2258 REMARK 3 24 1.8792 - 1.8528 1.00 3505 193 0.2055 0.2338 REMARK 3 25 1.8528 - 1.8277 1.00 3469 180 0.2072 0.2445 REMARK 3 26 1.8277 - 1.8040 1.00 3500 182 0.2125 0.2397 REMARK 3 27 1.8040 - 1.7815 1.00 3493 193 0.2167 0.2599 REMARK 3 28 1.7815 - 1.7600 1.00 3462 186 0.2228 0.2374 REMARK 3 29 1.7600 - 1.7395 1.00 3524 186 0.2267 0.3000 REMARK 3 30 1.7395 - 1.7200 1.00 3473 192 0.2493 0.2818 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.690 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 7104 REMARK 3 ANGLE : 1.419 9587 REMARK 3 CHIRALITY : 0.091 1063 REMARK 3 PLANARITY : 0.011 1234 REMARK 3 DIHEDRAL : 13.623 2692 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 3:93) REMARK 3 ORIGIN FOR THE GROUP (A): 36.7776 -5.9930 40.0590 REMARK 3 T TENSOR REMARK 3 T11: 0.1011 T22: 0.1912 REMARK 3 T33: 0.2413 T12: -0.0011 REMARK 3 T13: -0.0006 T23: -0.0301 REMARK 3 L TENSOR REMARK 3 L11: 1.4384 L22: 2.0541 REMARK 3 L33: 2.5629 L12: 0.6538 REMARK 3 L13: 0.5889 L23: 1.2407 REMARK 3 S TENSOR REMARK 3 S11: 0.0013 S12: -0.0652 S13: 0.1977 REMARK 3 S21: 0.0277 S22: 0.1750 S23: -0.2142 REMARK 3 S31: 0.0213 S32: 0.2445 S33: -0.1370 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 94:186) REMARK 3 ORIGIN FOR THE GROUP (A): 23.5971 -0.0999 43.6186 REMARK 3 T TENSOR REMARK 3 T11: 0.0906 T22: 0.1695 REMARK 3 T33: 0.2792 T12: -0.0065 REMARK 3 T13: 0.0055 T23: -0.0516 REMARK 3 L TENSOR REMARK 3 L11: 0.8928 L22: 2.5419 REMARK 3 L33: 3.0048 L12: -0.4682 REMARK 3 L13: 0.3008 L23: 0.8578 REMARK 3 S TENSOR REMARK 3 S11: 0.0552 S12: -0.0939 S13: 0.0123 REMARK 3 S21: 0.0635 S22: 0.0276 S23: 0.1253 REMARK 3 S31: -0.1333 S32: -0.0052 S33: -0.0955 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 187:427) REMARK 3 ORIGIN FOR THE GROUP (A): 33.8138 -27.6944 38.1049 REMARK 3 T TENSOR REMARK 3 T11: 0.1038 T22: 0.1568 REMARK 3 T33: 0.1571 T12: 0.0001 REMARK 3 T13: 0.0175 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 1.3054 L22: 1.3680 REMARK 3 L33: 0.4990 L12: 0.1691 REMARK 3 L13: 0.0365 L23: -0.1689 REMARK 3 S TENSOR REMARK 3 S11: -0.1020 S12: -0.1027 S13: -0.1675 REMARK 3 S21: 0.0394 S22: 0.0407 S23: -0.1643 REMARK 3 S31: -0.0096 S32: 0.0470 S33: 0.0502 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HQ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217172. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.07808 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 138107 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.592 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.1100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HUMAN SMYD3 (1-428) WITH SAM IN THE REMARK 280 SAM-BINDING SITE WAS CONCENTRATED TO 11.7 MG/ML IN 25 MM TRIS- REMARK 280 HCL PH 8 AND 150 MM NACL. PEPTIDE (21ST CENTURY BIOCHEMICAL) WAS REMARK 280 SOLUBILIZED IN 100MM WATER. TWO UL PEPTIDE WAS ADDED TO 200 UL REMARK 280 OF PROTEIN (FIVE FOLD MOLAR EXCESS OF PEPTIDE) AND ALLOWED TO REMARK 280 COMPLEX WITH THE PROTEIN OVERNIGHT AT 4C. CRYSTALS WERE OBTAINED REMARK 280 FROM A HAMPTON INDEX HT BROAD SCREEN IN SITTING DROPS AT 22C REMARK 280 WITH CONDITION H7 (0.15 DL-MALIC ACID PH 7.0, 20% W/V PEG 3,350) REMARK 280 . CRYSTALS WERE FLASH FROZEN IN 20 PERCENT ETHYLENE GLYCOL IN REMARK 280 WELL SOLUTION PRIOR TO DATA COLLECTION, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 59.07750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 PHE A -1 REMARK 465 THR A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 PHE B -1 REMARK 465 THR B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 SER B 428 REMARK 465 ASP I 251 REMARK 465 ASN I 252 REMARK 465 PRO I 253 REMARK 465 ILE I 254 REMARK 465 PHE I 255 REMARK 465 NH2 I 265 REMARK 465 TYR J 250 REMARK 465 ASP J 251 REMARK 465 ASN J 252 REMARK 465 PRO J 253 REMARK 465 ILE J 254 REMARK 465 PHE J 255 REMARK 465 NH2 J 265 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 42 CG CD CE NZ REMARK 470 LYS A 56 CD CE NZ REMARK 470 GLU A 57 CG CD OE1 OE2 REMARK 470 LYS A 58 CG CD CE NZ REMARK 470 LYS A 69 NZ REMARK 470 LYS A 74 CD CE NZ REMARK 470 LYS A 77 CD CE NZ REMARK 470 LYS A 78 CE NZ REMARK 470 LYS A 88 NZ REMARK 470 LYS A 94 CE NZ REMARK 470 ARG A 96 CD NE CZ NH1 NH2 REMARK 470 LYS A 111 NZ REMARK 470 ASP A 139 CG OD1 OD2 REMARK 470 LYS A 140 CG CD CE NZ REMARK 470 GLU A 157 CD OE1 OE2 REMARK 470 GLN A 281 CG CD OE1 NE2 REMARK 470 LYS A 284 CD CE NZ REMARK 470 LYS A 297 CE NZ REMARK 470 ARG A 319 CD NE CZ NH1 NH2 REMARK 470 LYS A 391 NZ REMARK 470 GLU A 412 CD OE1 OE2 REMARK 470 PRO B 3 CG CD REMARK 470 LEU B 4 CG CD1 CD2 REMARK 470 LYS B 5 CD CE NZ REMARK 470 ARG B 25 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 42 CD CE NZ REMARK 470 GLU B 57 CG CD OE1 OE2 REMARK 470 LYS B 58 CG CD CE NZ REMARK 470 LYS B 74 CE NZ REMARK 470 LYS B 77 CG CD CE NZ REMARK 470 LYS B 78 NZ REMARK 470 LYS B 84 CE NZ REMARK 470 ARG B 96 CD NE CZ NH1 NH2 REMARK 470 LYS B 122 CE NZ REMARK 470 LYS B 140 CD CE NZ REMARK 470 GLN B 146 CD OE1 NE2 REMARK 470 ARG B 156 NH1 NH2 REMARK 470 GLU B 247 CD OE1 OE2 REMARK 470 ARG B 250 NE CZ NH1 NH2 REMARK 470 LYS B 251 NZ REMARK 470 LYS B 284 CD CE NZ REMARK 470 GLU B 285 CD OE1 OE2 REMARK 470 LYS B 291 NZ REMARK 470 LYS B 292 NZ REMARK 470 LYS B 301 CE NZ REMARK 470 GLU B 303 CD OE1 OE2 REMARK 470 ARG B 319 CZ NH1 NH2 REMARK 470 LYS B 391 CD CE NZ REMARK 470 ARG B 401 CZ NH1 NH2 REMARK 470 ARG B 406 CD NE CZ NH1 NH2 REMARK 470 GLU B 412 CG CD OE1 OE2 REMARK 470 ILE B 415 CG1 CG2 CD1 REMARK 470 GLU B 419 CG CD OE1 OE2 REMARK 470 GLU B 420 CD OE1 OE2 REMARK 470 ASP B 422 CG OD1 OD2 REMARK 470 ARG B 426 NE CZ NH1 NH2 REMARK 470 GLU I 256 CG CD OE1 OE2 REMARK 470 LYS I 257 CG CD CE NZ REMARK 470 GLU J 256 CG CD OE1 OE2 REMARK 470 LYS J 257 CD CE NZ REMARK 470 THR J 263 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 607 O HOH A 632 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 41 CB CYS A 41 SG -0.100 REMARK 500 CYS B 261 CB CYS B 261 SG -0.103 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 180 CA - CB - SG ANGL. DEV. = 7.9 DEGREES REMARK 500 ASP B 50 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 MET B 308 CG - SD - CE ANGL. DEV. = -10.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 271 -0.63 75.67 REMARK 500 ARG B 51 -60.28 -90.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ARG A 319 10.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 49 SG REMARK 620 2 CYS A 52 SG 107.8 REMARK 620 3 CYS A 71 SG 113.9 113.0 REMARK 620 4 CYS A 75 SG 106.7 112.5 102.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 62 SG REMARK 620 2 CYS A 65 SG 111.5 REMARK 620 3 HIS A 83 NE2 110.2 103.7 REMARK 620 4 CYS A 87 SG 110.8 112.6 107.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 504 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 167 O REMARK 620 2 PHE A 169 O 91.7 REMARK 620 3 HOH A 873 O 80.0 101.3 REMARK 620 4 HOH A 924 O 94.8 88.5 169.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 208 SG REMARK 620 2 CYS A 261 SG 114.5 REMARK 620 3 CYS A 263 SG 105.7 106.8 REMARK 620 4 CYS A 266 SG 101.5 114.6 113.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 49 SG REMARK 620 2 CYS B 52 SG 107.2 REMARK 620 3 CYS B 71 SG 111.3 111.0 REMARK 620 4 CYS B 75 SG 109.6 116.4 101.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 62 SG REMARK 620 2 CYS B 65 SG 109.4 REMARK 620 3 HIS B 83 NE2 112.7 103.1 REMARK 620 4 CYS B 87 SG 111.9 111.9 107.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 504 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO B 167 O REMARK 620 2 PHE B 169 O 90.0 REMARK 620 3 HOH B 766 O 174.5 94.4 REMARK 620 4 HOH B 848 O 85.8 175.0 90.0 REMARK 620 5 HOH B 852 O 89.7 99.7 86.2 83.0 REMARK 620 6 HOH B 853 O 93.4 88.2 90.1 89.4 171.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 208 SG REMARK 620 2 CYS B 261 SG 115.0 REMARK 620 3 CYS B 263 SG 108.8 104.0 REMARK 620 4 CYS B 266 SG 94.7 116.3 118.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH B 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO I 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO J 301 DBREF 5HQ8 A 1 428 UNP Q9H7B4 SMYD3_HUMAN 1 428 DBREF 5HQ8 B 1 428 UNP Q9H7B4 SMYD3_HUMAN 1 428 DBREF 5HQ8 I 250 265 PDB 5HQ8 5HQ8 250 265 DBREF 5HQ8 J 250 265 PDB 5HQ8 5HQ8 250 265 SEQADV 5HQ8 GLY A -3 UNP Q9H7B4 EXPRESSION TAG SEQADV 5HQ8 SER A -2 UNP Q9H7B4 EXPRESSION TAG SEQADV 5HQ8 PHE A -1 UNP Q9H7B4 EXPRESSION TAG SEQADV 5HQ8 THR A 0 UNP Q9H7B4 EXPRESSION TAG SEQADV 5HQ8 ASN A 13 UNP Q9H7B4 LYS 13 CONFLICT SEQADV 5HQ8 GLY B -3 UNP Q9H7B4 EXPRESSION TAG SEQADV 5HQ8 SER B -2 UNP Q9H7B4 EXPRESSION TAG SEQADV 5HQ8 PHE B -1 UNP Q9H7B4 EXPRESSION TAG SEQADV 5HQ8 THR B 0 UNP Q9H7B4 EXPRESSION TAG SEQADV 5HQ8 ASN B 13 UNP Q9H7B4 LYS 13 CONFLICT SEQRES 1 A 432 GLY SER PHE THR MET GLU PRO LEU LYS VAL GLU LYS PHE SEQRES 2 A 432 ALA THR ALA ASN ARG GLY ASN GLY LEU ARG ALA VAL THR SEQRES 3 A 432 PRO LEU ARG PRO GLY GLU LEU LEU PHE ARG SER ASP PRO SEQRES 4 A 432 LEU ALA TYR THR VAL CYS LYS GLY SER ARG GLY VAL VAL SEQRES 5 A 432 CYS ASP ARG CYS LEU LEU GLY LYS GLU LYS LEU MET ARG SEQRES 6 A 432 CYS SER GLN CYS ARG VAL ALA LYS TYR CYS SER ALA LYS SEQRES 7 A 432 CYS GLN LYS LYS ALA TRP PRO ASP HIS LYS ARG GLU CYS SEQRES 8 A 432 LYS CYS LEU LYS SER CYS LYS PRO ARG TYR PRO PRO ASP SEQRES 9 A 432 SER VAL ARG LEU LEU GLY ARG VAL VAL PHE LYS LEU MET SEQRES 10 A 432 ASP GLY ALA PRO SER GLU SER GLU LYS LEU TYR SER PHE SEQRES 11 A 432 TYR ASP LEU GLU SER ASN ILE ASN LYS LEU THR GLU ASP SEQRES 12 A 432 LYS LYS GLU GLY LEU ARG GLN LEU VAL MET THR PHE GLN SEQRES 13 A 432 HIS PHE MET ARG GLU GLU ILE GLN ASP ALA SER GLN LEU SEQRES 14 A 432 PRO PRO ALA PHE ASP LEU PHE GLU ALA PHE ALA LYS VAL SEQRES 15 A 432 ILE CYS ASN SER PHE THR ILE CYS ASN ALA GLU MET GLN SEQRES 16 A 432 GLU VAL GLY VAL GLY LEU TYR PRO SER ILE SER LEU LEU SEQRES 17 A 432 ASN HIS SER CYS ASP PRO ASN CYS SER ILE VAL PHE ASN SEQRES 18 A 432 GLY PRO HIS LEU LEU LEU ARG ALA VAL ARG ASP ILE GLU SEQRES 19 A 432 VAL GLY GLU GLU LEU THR ILE CYS TYR LEU ASP MET LEU SEQRES 20 A 432 MET THR SER GLU GLU ARG ARG LYS GLN LEU ARG ASP GLN SEQRES 21 A 432 TYR CYS PHE GLU CYS ASP CYS PHE ARG CYS GLN THR GLN SEQRES 22 A 432 ASP LYS ASP ALA ASP MET LEU THR GLY ASP GLU GLN VAL SEQRES 23 A 432 TRP LYS GLU VAL GLN GLU SER LEU LYS LYS ILE GLU GLU SEQRES 24 A 432 LEU LYS ALA HIS TRP LYS TRP GLU GLN VAL LEU ALA MET SEQRES 25 A 432 CYS GLN ALA ILE ILE SER SER ASN SER GLU ARG LEU PRO SEQRES 26 A 432 ASP ILE ASN ILE TYR GLN LEU LYS VAL LEU ASP CYS ALA SEQRES 27 A 432 MET ASP ALA CYS ILE ASN LEU GLY LEU LEU GLU GLU ALA SEQRES 28 A 432 LEU PHE TYR GLY THR ARG THR MET GLU PRO TYR ARG ILE SEQRES 29 A 432 PHE PHE PRO GLY SER HIS PRO VAL ARG GLY VAL GLN VAL SEQRES 30 A 432 MET LYS VAL GLY LYS LEU GLN LEU HIS GLN GLY MET PHE SEQRES 31 A 432 PRO GLN ALA MET LYS ASN LEU ARG LEU ALA PHE ASP ILE SEQRES 32 A 432 MET ARG VAL THR HIS GLY ARG GLU HIS SER LEU ILE GLU SEQRES 33 A 432 ASP LEU ILE LEU LEU LEU GLU GLU CYS ASP ALA ASN ILE SEQRES 34 A 432 ARG ALA SER SEQRES 1 B 432 GLY SER PHE THR MET GLU PRO LEU LYS VAL GLU LYS PHE SEQRES 2 B 432 ALA THR ALA ASN ARG GLY ASN GLY LEU ARG ALA VAL THR SEQRES 3 B 432 PRO LEU ARG PRO GLY GLU LEU LEU PHE ARG SER ASP PRO SEQRES 4 B 432 LEU ALA TYR THR VAL CYS LYS GLY SER ARG GLY VAL VAL SEQRES 5 B 432 CYS ASP ARG CYS LEU LEU GLY LYS GLU LYS LEU MET ARG SEQRES 6 B 432 CYS SER GLN CYS ARG VAL ALA LYS TYR CYS SER ALA LYS SEQRES 7 B 432 CYS GLN LYS LYS ALA TRP PRO ASP HIS LYS ARG GLU CYS SEQRES 8 B 432 LYS CYS LEU LYS SER CYS LYS PRO ARG TYR PRO PRO ASP SEQRES 9 B 432 SER VAL ARG LEU LEU GLY ARG VAL VAL PHE LYS LEU MET SEQRES 10 B 432 ASP GLY ALA PRO SER GLU SER GLU LYS LEU TYR SER PHE SEQRES 11 B 432 TYR ASP LEU GLU SER ASN ILE ASN LYS LEU THR GLU ASP SEQRES 12 B 432 LYS LYS GLU GLY LEU ARG GLN LEU VAL MET THR PHE GLN SEQRES 13 B 432 HIS PHE MET ARG GLU GLU ILE GLN ASP ALA SER GLN LEU SEQRES 14 B 432 PRO PRO ALA PHE ASP LEU PHE GLU ALA PHE ALA LYS VAL SEQRES 15 B 432 ILE CYS ASN SER PHE THR ILE CYS ASN ALA GLU MET GLN SEQRES 16 B 432 GLU VAL GLY VAL GLY LEU TYR PRO SER ILE SER LEU LEU SEQRES 17 B 432 ASN HIS SER CYS ASP PRO ASN CYS SER ILE VAL PHE ASN SEQRES 18 B 432 GLY PRO HIS LEU LEU LEU ARG ALA VAL ARG ASP ILE GLU SEQRES 19 B 432 VAL GLY GLU GLU LEU THR ILE CYS TYR LEU ASP MET LEU SEQRES 20 B 432 MET THR SER GLU GLU ARG ARG LYS GLN LEU ARG ASP GLN SEQRES 21 B 432 TYR CYS PHE GLU CYS ASP CYS PHE ARG CYS GLN THR GLN SEQRES 22 B 432 ASP LYS ASP ALA ASP MET LEU THR GLY ASP GLU GLN VAL SEQRES 23 B 432 TRP LYS GLU VAL GLN GLU SER LEU LYS LYS ILE GLU GLU SEQRES 24 B 432 LEU LYS ALA HIS TRP LYS TRP GLU GLN VAL LEU ALA MET SEQRES 25 B 432 CYS GLN ALA ILE ILE SER SER ASN SER GLU ARG LEU PRO SEQRES 26 B 432 ASP ILE ASN ILE TYR GLN LEU LYS VAL LEU ASP CYS ALA SEQRES 27 B 432 MET ASP ALA CYS ILE ASN LEU GLY LEU LEU GLU GLU ALA SEQRES 28 B 432 LEU PHE TYR GLY THR ARG THR MET GLU PRO TYR ARG ILE SEQRES 29 B 432 PHE PHE PRO GLY SER HIS PRO VAL ARG GLY VAL GLN VAL SEQRES 30 B 432 MET LYS VAL GLY LYS LEU GLN LEU HIS GLN GLY MET PHE SEQRES 31 B 432 PRO GLN ALA MET LYS ASN LEU ARG LEU ALA PHE ASP ILE SEQRES 32 B 432 MET ARG VAL THR HIS GLY ARG GLU HIS SER LEU ILE GLU SEQRES 33 B 432 ASP LEU ILE LEU LEU LEU GLU GLU CYS ASP ALA ASN ILE SEQRES 34 B 432 ARG ALA SER SEQRES 1 I 16 TYR ASP ASN PRO ILE PHE GLU LYS PHE GLY LYS GLY GLY SEQRES 2 I 16 THR TYR NH2 SEQRES 1 J 16 TYR ASP ASN PRO ILE PHE GLU LYS PHE GLY LYS GLY GLY SEQRES 2 J 16 THR TYR NH2 HET ZN A 501 1 HET ZN A 502 1 HET ZN A 503 1 HET MG A 504 1 HET EDO A 505 4 HET EDO A 506 4 HET SAH A 507 26 HET ZN B 501 1 HET ZN B 502 1 HET ZN B 503 1 HET MG B 504 1 HET EDO B 505 4 HET GOL B 506 6 HET EDO B 507 4 HET SAH B 508 26 HET EDO I 301 4 HET EDO J 301 4 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM EDO 1,2-ETHANEDIOL HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM GOL GLYCEROL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 ZN 6(ZN 2+) FORMUL 8 MG 2(MG 2+) FORMUL 9 EDO 6(C2 H6 O2) FORMUL 11 SAH 2(C14 H20 N6 O5 S) FORMUL 17 GOL C3 H8 O3 FORMUL 22 HOH *717(H2 O) HELIX 1 AA1 LYS A 42 ARG A 45 5 4 HELIX 2 AA2 SER A 72 LYS A 94 1 23 HELIX 3 AA3 PRO A 99 LEU A 112 1 14 HELIX 4 AA4 SER A 118 LYS A 122 5 5 HELIX 5 AA5 SER A 125 LEU A 129 5 5 HELIX 6 AA6 ASN A 132 LEU A 136 5 5 HELIX 7 AA7 THR A 137 MET A 155 1 19 HELIX 8 AA8 ASP A 161 LEU A 165 5 5 HELIX 9 AA9 ASP A 170 SER A 182 1 13 HELIX 10 AB1 SER A 200 LEU A 204 5 5 HELIX 11 AB2 THR A 245 CYS A 258 1 14 HELIX 12 AB3 CYS A 263 GLN A 269 1 7 HELIX 13 AB4 LYS A 271 LEU A 276 1 6 HELIX 14 AB5 ASP A 279 HIS A 299 1 21 HELIX 15 AB6 LYS A 301 ASN A 316 1 16 HELIX 16 AB7 ASN A 324 GLY A 342 1 19 HELIX 17 AB8 LEU A 343 THR A 354 1 12 HELIX 18 AB9 THR A 354 PHE A 362 1 9 HELIX 19 AC1 HIS A 366 GLN A 383 1 18 HELIX 20 AC2 MET A 385 HIS A 404 1 20 HELIX 21 AC3 SER A 409 SER A 428 1 20 HELIX 22 AC4 LYS B 42 ARG B 45 5 4 HELIX 23 AC5 SER B 72 LYS B 84 1 13 HELIX 24 AC6 GLU B 86 LYS B 94 1 9 HELIX 25 AC7 PRO B 99 LEU B 112 1 14 HELIX 26 AC8 SER B 118 LYS B 122 5 5 HELIX 27 AC9 SER B 125 LEU B 129 5 5 HELIX 28 AD1 ASN B 132 LEU B 136 5 5 HELIX 29 AD2 THR B 137 MET B 155 1 19 HELIX 30 AD3 ASP B 161 LEU B 165 5 5 HELIX 31 AD4 ASP B 170 SER B 182 1 13 HELIX 32 AD5 SER B 200 LEU B 204 5 5 HELIX 33 AD6 THR B 245 CYS B 258 1 14 HELIX 34 AD7 CYS B 263 GLN B 269 1 7 HELIX 35 AD8 LYS B 271 LEU B 276 1 6 HELIX 36 AD9 ASP B 279 HIS B 299 1 21 HELIX 37 AE1 LYS B 301 ASN B 316 1 16 HELIX 38 AE2 ASN B 324 GLY B 342 1 19 HELIX 39 AE3 LEU B 343 ARG B 353 1 11 HELIX 40 AE4 THR B 354 PHE B 362 1 9 HELIX 41 AE5 HIS B 366 GLN B 383 1 18 HELIX 42 AE6 MET B 385 HIS B 404 1 20 HELIX 43 AE7 HIS B 408 ALA B 427 1 20 SHEET 1 AA1 4 VAL A 6 ALA A 10 0 SHEET 2 AA1 4 ASN A 16 ALA A 20 -1 O ARG A 19 N GLU A 7 SHEET 3 AA1 4 GLU A 234 ILE A 237 -1 O LEU A 235 N LEU A 18 SHEET 4 AA1 4 ASN A 205 HIS A 206 1 N ASN A 205 O ILE A 237 SHEET 1 AA2 3 LEU A 29 SER A 33 0 SHEET 2 AA2 3 HIS A 220 ALA A 225 -1 O LEU A 221 N SER A 33 SHEET 3 AA2 3 CYS A 212 ASN A 217 -1 N ASN A 217 O HIS A 220 SHEET 1 AA3 3 ALA A 37 VAL A 40 0 SHEET 2 AA3 3 GLU A 192 LEU A 197 -1 O LEU A 197 N ALA A 37 SHEET 3 AA3 3 PHE A 183 CYS A 186 -1 N ILE A 185 O VAL A 193 SHEET 1 AA4 2 MET A 60 ARG A 61 0 SHEET 2 AA4 2 LYS A 69 TYR A 70 -1 O TYR A 70 N MET A 60 SHEET 1 AA5 2 VAL B 6 ALA B 10 0 SHEET 2 AA5 2 ASN B 16 ALA B 20 -1 O GLY B 17 N PHE B 9 SHEET 1 AA6 3 LEU B 29 SER B 33 0 SHEET 2 AA6 3 HIS B 220 ALA B 225 -1 O LEU B 221 N SER B 33 SHEET 3 AA6 3 CYS B 212 ASN B 217 -1 N ASN B 217 O HIS B 220 SHEET 1 AA7 3 ALA B 37 VAL B 40 0 SHEET 2 AA7 3 GLU B 192 LEU B 197 -1 O LEU B 197 N ALA B 37 SHEET 3 AA7 3 PHE B 183 CYS B 186 -1 N PHE B 183 O GLY B 196 SHEET 1 AA8 2 MET B 60 ARG B 61 0 SHEET 2 AA8 2 LYS B 69 TYR B 70 -1 O TYR B 70 N MET B 60 SHEET 1 AA9 2 ASN B 205 HIS B 206 0 SHEET 2 AA9 2 THR B 236 ILE B 237 1 O ILE B 237 N ASN B 205 LINK SG CYS A 49 ZN ZN A 503 1555 1555 2.38 LINK SG CYS A 52 ZN ZN A 503 1555 1555 2.29 LINK SG CYS A 62 ZN ZN A 502 1555 1555 2.32 LINK SG CYS A 65 ZN ZN A 502 1555 1555 2.28 LINK SG CYS A 71 ZN ZN A 503 1555 1555 2.32 LINK SG CYS A 75 ZN ZN A 503 1555 1555 2.09 LINK NE2 HIS A 83 ZN ZN A 502 1555 1555 2.08 LINK SG CYS A 87 ZN ZN A 502 1555 1555 2.37 LINK O PRO A 167 MG MG A 504 1555 1555 2.43 LINK O PHE A 169 MG MG A 504 1555 1555 2.42 LINK SG CYS A 208 ZN ZN A 501 1555 1555 2.38 LINK SG CYS A 261 ZN ZN A 501 1555 1555 2.34 LINK SG CYS A 263 ZN ZN A 501 1555 1555 2.32 LINK SG CYS A 266 ZN ZN A 501 1555 1555 2.33 LINK MG MG A 504 O HOH A 873 1555 1555 2.21 LINK MG MG A 504 O HOH A 924 1555 1555 2.21 LINK SG CYS B 49 ZN ZN B 503 1555 1555 2.35 LINK SG CYS B 52 ZN ZN B 503 1555 1555 2.31 LINK SG CYS B 62 ZN ZN B 502 1555 1555 2.34 LINK SG CYS B 65 ZN ZN B 502 1555 1555 2.30 LINK SG CYS B 71 ZN ZN B 503 1555 1555 2.37 LINK SG CYS B 75 ZN ZN B 503 1555 1555 2.26 LINK NE2 HIS B 83 ZN ZN B 502 1555 1555 2.08 LINK SG CYS B 87 ZN ZN B 502 1555 1555 2.32 LINK O PRO B 167 MG MG B 504 1555 1555 2.41 LINK O PHE B 169 MG MG B 504 1555 1555 2.49 LINK SG CYS B 208 ZN ZN B 501 1555 1555 2.37 LINK SG CYS B 261 ZN ZN B 501 1555 1555 2.32 LINK SG CYS B 263 ZN ZN B 501 1555 1555 2.39 LINK SG CYS B 266 ZN ZN B 501 1555 1555 2.34 LINK MG MG B 504 O HOH B 766 1555 1555 2.13 LINK MG MG B 504 O HOH B 848 1555 1555 2.22 LINK MG MG B 504 O HOH B 852 1555 1555 2.16 LINK MG MG B 504 O HOH B 853 1555 1555 2.26 CISPEP 1 LYS A 94 PRO A 95 0 -0.13 CISPEP 2 LYS B 94 PRO B 95 0 1.38 SITE 1 AC1 4 CYS A 208 CYS A 261 CYS A 263 CYS A 266 SITE 1 AC2 4 CYS A 62 CYS A 65 HIS A 83 CYS A 87 SITE 1 AC3 4 CYS A 49 CYS A 52 CYS A 71 CYS A 75 SITE 1 AC4 4 PRO A 167 PHE A 169 HOH A 873 HOH A 924 SITE 1 AC5 3 LEU A 344 HIS A 382 GLN A 383 SITE 1 AC6 7 CYS A 238 LEU A 240 MET A 242 HIS A 366 SITE 2 AC6 7 HOH A 710 GLY I 262 TYR I 264 SITE 1 AC7 23 ARG A 14 GLY A 15 ASN A 16 TYR A 124 SITE 2 AC7 23 GLU A 130 ASN A 132 CYS A 180 ASN A 181 SITE 3 AC7 23 SER A 202 LEU A 204 ASN A 205 HIS A 206 SITE 4 AC7 23 TYR A 239 TYR A 257 PHE A 259 HOH A 671 SITE 5 AC7 23 HOH A 698 HOH A 753 HOH A 789 HOH A 804 SITE 6 AC7 23 HOH A 865 HOH A 878 LYS I 260 SITE 1 AC8 4 CYS B 208 CYS B 261 CYS B 263 CYS B 266 SITE 1 AC9 4 CYS B 62 CYS B 65 HIS B 83 CYS B 87 SITE 1 AD1 4 CYS B 49 CYS B 52 CYS B 71 CYS B 75 SITE 1 AD2 6 PRO B 167 PHE B 169 HOH B 766 HOH B 848 SITE 2 AD2 6 HOH B 852 HOH B 853 SITE 1 AD3 8 THR B 184 CYS B 186 ILE B 214 PHE B 216 SITE 2 AD3 8 HOH B 649 GLY J 261 GLY J 262 HOH J 401 SITE 1 AD4 7 GLN B 152 ILE B 159 ALA B 162 LEU B 171 SITE 2 AD4 7 HOH B 607 HOH B 616 HOH B 786 SITE 1 AD5 7 CYS B 238 LEU B 240 MET B 242 HIS B 366 SITE 2 AD5 7 HOH B 762 GLY J 262 TYR J 264 SITE 1 AD6 20 ARG B 14 ASN B 16 TYR B 124 ASN B 132 SITE 2 AD6 20 CYS B 180 ASN B 181 SER B 202 LEU B 204 SITE 3 AD6 20 ASN B 205 HIS B 206 TYR B 239 TYR B 257 SITE 4 AD6 20 PHE B 259 HOH B 611 HOH B 638 HOH B 642 SITE 5 AD6 20 HOH B 716 HOH B 721 HOH B 763 LYS J 260 SITE 1 AD7 5 GLU A 192 GLY I 261 HOH I 405 HOH I 406 SITE 2 AD7 5 HOH I 407 SITE 1 AD8 3 GLU B 192 GLY J 261 HOH J 405 CRYST1 53.109 118.155 84.782 90.00 90.61 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018829 0.000000 0.000200 0.00000 SCALE2 0.000000 0.008463 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011796 0.00000