HEADER TRANSFERASE 29-JAN-16 5HWL
TITLE HUMAN GLUTATHIONE S-TRANSFERASE MU2 COMPLEXED WITH BDEA, MONOCLINIC
TITLE 2 CRYSTAL FORM
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE MU 2;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: GST CLASS-MU 2,GSTM2-2;
COMPND 5 EC: 2.5.1.18;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: GSTM2, GST4;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A
KEYWDS INHIBITOR, COMPLEX, TARGET, TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR X.ZHANG,J.WEI,S.WU,H.P.ZHANG,M.LUO,X.L.YANG,F.LIAO,D.Q.WANG
REVDAT 2 08-NOV-23 5HWL 1 REMARK
REVDAT 1 08-NOV-17 5HWL 0
JRNL AUTH X.ZHANG,J.WEI,S.WU,H.P.ZHANG,M.LUO,X.L.YANG,F.LIAO,D.Q.WANG
JRNL TITL HUMAN GLUTATHIONE S-TRANSFERASE MU2 COMPLEXED WITH BDEA,
JRNL TITL 2 MONOCLINIC CRYSTAL FORM
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 1.60 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.10.1_2155
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.55
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6
REMARK 3 NUMBER OF REFLECTIONS : 57270
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.179
REMARK 3 R VALUE (WORKING SET) : 0.178
REMARK 3 FREE R VALUE : 0.206
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.390
REMARK 3 FREE R VALUE TEST SET COUNT : 1943
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 45.5693 - 3.8555 0.99 4179 159 0.1620 0.1813
REMARK 3 2 3.8555 - 3.0605 1.00 4102 146 0.1639 0.2037
REMARK 3 3 3.0605 - 2.6736 0.97 3983 135 0.1856 0.2163
REMARK 3 4 2.6736 - 2.4292 0.98 4021 134 0.1796 0.1971
REMARK 3 5 2.4292 - 2.2551 0.98 4014 142 0.1792 0.1869
REMARK 3 6 2.2551 - 2.1221 0.98 3966 148 0.1749 0.2114
REMARK 3 7 2.1221 - 2.0159 0.98 4003 146 0.1786 0.2222
REMARK 3 8 2.0159 - 1.9281 0.97 3986 145 0.1906 0.2215
REMARK 3 9 1.9281 - 1.8539 0.97 3945 122 0.1944 0.2191
REMARK 3 10 1.8539 - 1.7899 0.96 3921 144 0.1977 0.2164
REMARK 3 11 1.7899 - 1.7339 0.95 3881 124 0.2060 0.2417
REMARK 3 12 1.7339 - 1.6844 0.95 3798 130 0.1971 0.2495
REMARK 3 13 1.6844 - 1.6400 0.93 3770 139 0.2066 0.2175
REMARK 3 14 1.6400 - 1.6000 0.92 3758 129 0.2260 0.2841
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.400
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.48
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.007 3747
REMARK 3 ANGLE : 1.064 5050
REMARK 3 CHIRALITY : 0.057 520
REMARK 3 PLANARITY : 0.006 649
REMARK 3 DIHEDRAL : 21.456 1423
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5HWL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-AUG-16.
REMARK 100 THE DEPOSITION ID IS D_1000217442.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 30-DEC-15
REMARK 200 TEMPERATURE (KELVIN) : 173
REMARK 200 PH : 6.0-7.2
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SSRF
REMARK 200 BEAMLINE : BL17U
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM
REMARK 200 DATA SCALING SOFTWARE : SCALA
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 414184
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600
REMARK 200 RESOLUTION RANGE LOW (A) : 48.890
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9
REMARK 200 DATA REDUNDANCY : 7.100
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.8000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69
REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4
REMARK 200 DATA REDUNDANCY IN SHELL : 7.10
REMARK 200 R MERGE FOR SHELL (I) : 0.41000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.200
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 1XW5
REMARK 200
REMARK 200 REMARK:
REMARK 200 THE ENTRY CONTAINS FRIEDEL PAIRS IN F_PLUS/MINUS COLUMNS AND I_
REMARK 200 PLUS/MINUS COLUMNS.
REMARK 200
REMARK 200 COLUMNAR CRYSTAL, 0.1MM X 0.1 MM X 0.5 MM
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 44.26
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.02 M MAGNESIUM CHLORIDE, 0.1M
REMARK 280 HEPES,PH 6.8, POLYACRYLIC ACID SODIUM SALT 5100, VAPOR DIFFUSION,
REMARK 280 HANGING DROP, TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 24.44500
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 4700 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 17860 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 PRO B 1
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 GLU A 28 CD OE1 OE2
REMARK 470 LYS A 30 CD CE NZ
REMARK 470 LYS A 31 CG CD CE NZ
REMARK 470 ARG A 42 CZ NH1 NH2
REMARK 470 GLN A 44 NE2
REMARK 470 THR A 66 OG1 CG2
REMARK 470 LYS A 82 CG CD CE NZ
REMARK 470 GLU A 88 CG CD OE1 OE2
REMARK 470 LYS A 91 CD CE NZ
REMARK 470 ARG A 95 CD NE CZ NH1 NH2
REMARK 470 GLN A 109 OE1 NE2
REMARK 470 LYS A 112 CD CE NZ
REMARK 470 LYS A 121 CE NZ
REMARK 470 GLU A 125 CG CD OE1 OE2
REMARK 470 GLN A 128 CG CD OE1 NE2
REMARK 470 GLU A 132 OE1 OE2
REMARK 470 LYS A 135 CG CD CE NZ
REMARK 470 LYS A 143 CG CD CE NZ
REMARK 470 LYS A 151 CG CD CE NZ
REMARK 470 LYS A 198 CE NZ
REMARK 470 ARG A 205 CG CD NE CZ NH1 NH2
REMARK 470 LYS A 210 CG CD CE NZ
REMARK 470 LYS A 217 CG CD CE NZ
REMARK 470 ASN B 8 ND2
REMARK 470 GLU B 28 CG CD OE1 OE2
REMARK 470 LYS B 30 CG CD CE NZ
REMARK 470 LYS B 31 CG CD CE NZ
REMARK 470 ASP B 39 CG OD1 OD2
REMARK 470 ASP B 41 CG OD1 OD2
REMARK 470 ARG B 42 CG CD NE CZ NH1 NH2
REMARK 470 SER B 43 OG
REMARK 470 GLN B 44 CG CD OE1 NE2
REMARK 470 ASN B 47 CG OD1 ND2
REMARK 470 THR B 66 OG1 CG2
REMARK 480
REMARK 480 ZERO OCCUPANCY ATOM
REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO
REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS
REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME;
REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 480 M RES C SSEQI ATOMS
REMARK 480 LYS B 68 CE NZ
REMARK 480 LYS B 82 CE NZ
REMARK 480 ASN B 84 CG OD1 ND2
REMARK 480 GLU B 88 CB CG CD OE1 OE2
REMARK 480 LYS B 91 CG CD CE NZ
REMARK 480 ARG B 95 NE CZ NH1 NH2
REMARK 480 GLN B 109 CG CD OE1 NE2
REMARK 480 LYS B 112 CG CD CE NZ
REMARK 480 ASP B 118 CB CG OD1 OD2
REMARK 480 PHE B 119 CG CD2 CE2 CZ
REMARK 480 LYS B 121 CB CG CD CE NZ
REMARK 480 LEU B 122 CB CG CD1 CD2
REMARK 480 GLU B 125 CB CG CD OE1 OE2
REMARK 480 GLN B 128 CB CG CD OE1 NE2
REMARK 480 GLU B 132 CG CD OE1 OE2
REMARK 480 LYS B 135 CG CD CE NZ
REMARK 480 GLN B 139 CD OE1 NE2
REMARK 480 LYS B 143 CD CE NZ
REMARK 480 ASP B 150 CG OD1 OD2
REMARK 480 LYS B 151 CG CD CE NZ
REMARK 480 LYS B 181 CD CE NZ
REMARK 480 GLU B 191 CG CD OE1 OE2
REMARK 480 LYS B 192 CG CD CE NZ
REMARK 480 LYS B 198 CG CD CE NZ
REMARK 480 ARG B 201 CG CD NE
REMARK 480 ARG B 205 CB CG CD NE CZ NH1 NH2
REMARK 480 LYS B 210 CG CD CE NZ
REMARK 480 LYS B 217 CB CG CD CE NZ
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 OD1 ASP B 175 NZ LYS B 181 2.00
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION
REMARK 500 PRO A 1 C PRO A 1 O -0.169
REMARK 500 THR A 3 C THR A 3 O -0.115
REMARK 500 LEU A 4 C LEU A 4 O -0.127
REMARK 500 GLY A 5 C GLY A 5 O -0.115
REMARK 500 TRP A 7 CZ3 TRP A 7 CH2 -0.101
REMARK 500 LEU A 12 C LEU A 12 O -0.136
REMARK 500 HIS A 14 C HIS A 14 O -0.157
REMARK 500 SER A 15 CB SER A 15 OG -0.092
REMARK 500 SER A 15 C SER A 15 O -0.141
REMARK 500 LEU A 18 C LEU A 18 O -0.128
REMARK 500 LEU A 19 C LEU A 19 O -0.148
REMARK 500 LEU A 20 C LEU A 20 O -0.141
REMARK 500 GLU A 21 CD GLU A 21 OE1 -0.085
REMARK 500 TYR A 22 C TYR A 22 O -0.117
REMARK 500 SER A 25 C SER A 25 O -0.151
REMARK 500 GLU A 28 CB GLU A 28 CG -0.119
REMARK 500 GLU A 28 C GLU A 28 O -0.143
REMARK 500 GLU A 29 CD GLU A 29 OE2 -0.123
REMARK 500 TYR A 32 CE1 TYR A 32 CZ -0.089
REMARK 500 TYR A 32 C TYR A 32 O -0.122
REMARK 500 THR A 33 C THR A 33 O -0.144
REMARK 500 TYR A 40 CG TYR A 40 CD2 -0.085
REMARK 500 TYR A 40 CG TYR A 40 CD1 -0.158
REMARK 500 TYR A 40 CZ TYR A 40 CE2 -0.164
REMARK 500 SER A 43 CB SER A 43 OG -0.149
REMARK 500 TRP A 45 CE3 TRP A 45 CZ3 -0.219
REMARK 500 TRP A 45 C TRP A 45 O -0.127
REMARK 500 GLU A 48 CD GLU A 48 OE1 -0.150
REMARK 500 GLU A 48 CD GLU A 48 OE2 -0.109
REMARK 500 PHE A 50 C PHE A 50 O -0.135
REMARK 500 LEU A 52 C LEU A 52 O -0.114
REMARK 500 GLY A 53 C GLY A 53 O -0.147
REMARK 500 PHE A 56 C PHE A 56 O -0.184
REMARK 500 LEU A 59 C LEU A 59 O -0.132
REMARK 500 PRO A 60 C PRO A 60 O -0.188
REMARK 500 TYR A 61 CG TYR A 61 CD2 -0.121
REMARK 500 TYR A 61 CE1 TYR A 61 CZ -0.132
REMARK 500 ILE A 63 C ILE A 63 O -0.137
REMARK 500 ASP A 64 CG ASP A 64 OD2 -0.150
REMARK 500 GLY A 65 C GLY A 65 O -0.141
REMARK 500 THR A 66 C THR A 66 O -0.147
REMARK 500 HIS A 67 C HIS A 67 O -0.146
REMARK 500 LYS A 68 C LYS A 68 O -0.152
REMARK 500 THR A 70 C THR A 70 O -0.140
REMARK 500 SER A 72 CB SER A 72 OG -0.110
REMARK 500 SER A 72 C SER A 72 O -0.175
REMARK 500 ASN A 73 CG ASN A 73 OD1 -0.162
REMARK 500 ASN A 73 C ASN A 73 O -0.175
REMARK 500 ILE A 75 C ILE A 75 O -0.132
REMARK 500 LEU A 76 C LEU A 76 O -0.135
REMARK 500
REMARK 500 THIS ENTRY HAS 279 BOND DEVIATIONS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 ASP A 36 CB - CG - OD1 ANGL. DEV. = 10.5 DEGREES
REMARK 500 ASP A 41 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES
REMARK 500 GLU A 48 OE1 - CD - OE2 ANGL. DEV. = -7.8 DEGREES
REMARK 500 LEU A 85 CB - CG - CD1 ANGL. DEV. = 12.2 DEGREES
REMARK 500 LEU A 113 CB - CG - CD1 ANGL. DEV. = -10.3 DEGREES
REMARK 500 ASP A 118 CB - CG - OD2 ANGL. DEV. = -6.8 DEGREES
REMARK 500 PHE A 119 CB - CG - CD1 ANGL. DEV. = 4.5 DEGREES
REMARK 500 LEU A 122 CB - CG - CD2 ANGL. DEV. = 13.1 DEGREES
REMARK 500 MET A 133 CG - SD - CE ANGL. DEV. = -13.6 DEGREES
REMARK 500 PHE A 140 CZ - CE2 - CD2 ANGL. DEV. = -7.3 DEGREES
REMARK 500 ASP A 150 CB - CG - OD1 ANGL. DEV. = 7.6 DEGREES
REMARK 500 ARG A 201 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES
REMARK 500 PRO A 206 C - N - CD ANGL. DEV. = 13.5 DEGREES
REMARK 500 MET A 211 CG - SD - CE ANGL. DEV. = 9.7 DEGREES
REMARK 500 ASP B 36 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES
REMARK 500 ASP B 36 CB - CG - OD2 ANGL. DEV. = -5.4 DEGREES
REMARK 500 PRO B 38 C - N - CD ANGL. DEV. = 17.7 DEGREES
REMARK 500 ASP B 97 CB - CG - OD2 ANGL. DEV. = -6.6 DEGREES
REMARK 500 LYS B 123 CD - CE - NZ ANGL. DEV. = 14.1 DEGREES
REMARK 500 LEU B 130 CB - CG - CD1 ANGL. DEV. = -11.4 DEGREES
REMARK 500 ASP B 150 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES
REMARK 500 LYS B 151 N - CA - CB ANGL. DEV. = -12.1 DEGREES
REMARK 500 LYS B 151 CD - CE - NZ ANGL. DEV. = -15.5 DEGREES
REMARK 500 ARG B 165 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES
REMARK 500 ASP B 175 CB - CG - OD1 ANGL. DEV. = 10.6 DEGREES
REMARK 500 LEU B 203 CB - CG - CD2 ANGL. DEV. = 13.5 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ARG A 10 -73.08 -63.16
REMARK 500 GLN A 71 109.95 83.64
REMARK 500 ARG B 10 -72.60 -68.02
REMARK 500 GLN B 71 112.21 83.64
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residues GSH A 301 and NNE B
REMARK 800 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residues GSH B 301 and NNE B
REMARK 800 302
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1XW5 RELATED DB: PDB
REMARK 900 THE SAME PROTEIN COMPLEXED WITH GSH
DBREF 5HWL A 1 217 UNP P28161 GSTM2_HUMAN 2 218
DBREF 5HWL B 1 217 UNP P28161 GSTM2_HUMAN 2 218
SEQRES 1 A 217 PRO MET THR LEU GLY TYR TRP ASN ILE ARG GLY LEU ALA
SEQRES 2 A 217 HIS SER ILE ARG LEU LEU LEU GLU TYR THR ASP SER SER
SEQRES 3 A 217 TYR GLU GLU LYS LYS TYR THR MET GLY ASP ALA PRO ASP
SEQRES 4 A 217 TYR ASP ARG SER GLN TRP LEU ASN GLU LYS PHE LYS LEU
SEQRES 5 A 217 GLY LEU ASP PHE PRO ASN LEU PRO TYR LEU ILE ASP GLY
SEQRES 6 A 217 THR HIS LYS ILE THR GLN SER ASN ALA ILE LEU ARG TYR
SEQRES 7 A 217 ILE ALA ARG LYS HIS ASN LEU CYS GLY GLU SER GLU LYS
SEQRES 8 A 217 GLU GLN ILE ARG GLU ASP ILE LEU GLU ASN GLN PHE MET
SEQRES 9 A 217 ASP SER ARG MET GLN LEU ALA LYS LEU CYS TYR ASP PRO
SEQRES 10 A 217 ASP PHE GLU LYS LEU LYS PRO GLU TYR LEU GLN ALA LEU
SEQRES 11 A 217 PRO GLU MET LEU LYS LEU TYR SER GLN PHE LEU GLY LYS
SEQRES 12 A 217 GLN PRO TRP PHE LEU GLY ASP LYS ILE THR PHE VAL ASP
SEQRES 13 A 217 PHE ILE ALA TYR ASP VAL LEU GLU ARG ASN GLN VAL PHE
SEQRES 14 A 217 GLU PRO SER CYS LEU ASP ALA PHE PRO ASN LEU LYS ASP
SEQRES 15 A 217 PHE ILE SER ARG PHE GLU GLY LEU GLU LYS ILE SER ALA
SEQRES 16 A 217 TYR MET LYS SER SER ARG PHE LEU PRO ARG PRO VAL PHE
SEQRES 17 A 217 THR LYS MET ALA VAL TRP GLY ASN LYS
SEQRES 1 B 217 PRO MET THR LEU GLY TYR TRP ASN ILE ARG GLY LEU ALA
SEQRES 2 B 217 HIS SER ILE ARG LEU LEU LEU GLU TYR THR ASP SER SER
SEQRES 3 B 217 TYR GLU GLU LYS LYS TYR THR MET GLY ASP ALA PRO ASP
SEQRES 4 B 217 TYR ASP ARG SER GLN TRP LEU ASN GLU LYS PHE LYS LEU
SEQRES 5 B 217 GLY LEU ASP PHE PRO ASN LEU PRO TYR LEU ILE ASP GLY
SEQRES 6 B 217 THR HIS LYS ILE THR GLN SER ASN ALA ILE LEU ARG TYR
SEQRES 7 B 217 ILE ALA ARG LYS HIS ASN LEU CYS GLY GLU SER GLU LYS
SEQRES 8 B 217 GLU GLN ILE ARG GLU ASP ILE LEU GLU ASN GLN PHE MET
SEQRES 9 B 217 ASP SER ARG MET GLN LEU ALA LYS LEU CYS TYR ASP PRO
SEQRES 10 B 217 ASP PHE GLU LYS LEU LYS PRO GLU TYR LEU GLN ALA LEU
SEQRES 11 B 217 PRO GLU MET LEU LYS LEU TYR SER GLN PHE LEU GLY LYS
SEQRES 12 B 217 GLN PRO TRP PHE LEU GLY ASP LYS ILE THR PHE VAL ASP
SEQRES 13 B 217 PHE ILE ALA TYR ASP VAL LEU GLU ARG ASN GLN VAL PHE
SEQRES 14 B 217 GLU PRO SER CYS LEU ASP ALA PHE PRO ASN LEU LYS ASP
SEQRES 15 B 217 PHE ILE SER ARG PHE GLU GLY LEU GLU LYS ILE SER ALA
SEQRES 16 B 217 TYR MET LYS SER SER ARG PHE LEU PRO ARG PRO VAL PHE
SEQRES 17 B 217 THR LYS MET ALA VAL TRP GLY ASN LYS
HET GSH A 301 20
HET GSH B 301 20
HET NNE B 302 42
HETNAM GSH GLUTATHIONE
HETNAM NNE N,N'-(BUTANE-1,4-DIYL)BIS{2-[2,3-DICHLORO-4-(2-
HETNAM 2 NNE METHYLIDENEBUTANOYL)PHENOXY]ACETAMIDE}
FORMUL 3 GSH 2(C10 H17 N3 O6 S)
FORMUL 5 NNE C30 H32 CL4 N2 O6
FORMUL 6 HOH *223(H2 O)
HELIX 1 AA1 ARG A 10 LEU A 12 5 3
HELIX 2 AA2 ALA A 13 THR A 23 1 11
HELIX 3 AA3 ARG A 42 ASN A 47 1 6
HELIX 4 AA4 GLN A 71 HIS A 83 1 13
HELIX 5 AA5 SER A 89 TYR A 115 1 27
HELIX 6 AA6 ASP A 118 GLY A 142 1 25
HELIX 7 AA7 THR A 153 GLU A 170 1 18
HELIX 8 AA8 PHE A 177 GLY A 189 1 13
HELIX 9 AA9 LEU A 190 LYS A 198 1 9
HELIX 10 AB1 ARG B 10 LEU B 12 5 3
HELIX 11 AB2 ALA B 13 THR B 23 1 11
HELIX 12 AB3 ARG B 42 ASN B 47 1 6
HELIX 13 AB4 GLN B 71 HIS B 83 1 13
HELIX 14 AB5 SER B 89 TYR B 115 1 27
HELIX 15 AB6 ASP B 118 GLY B 142 1 25
HELIX 16 AB7 THR B 153 GLU B 170 1 18
HELIX 17 AB8 PHE B 177 LEU B 190 1 14
HELIX 18 AB9 LEU B 190 LYS B 198 1 9
SHEET 1 AA1 4 TYR A 27 TYR A 32 0
SHEET 2 AA1 4 MET A 2 TRP A 7 1 N LEU A 4 O LYS A 30
SHEET 3 AA1 4 TYR A 61 ASP A 64 -1 O TYR A 61 N GLY A 5
SHEET 4 AA1 4 HIS A 67 THR A 70 -1 O ILE A 69 N LEU A 62
SHEET 1 AA2 4 GLU B 28 TYR B 32 0
SHEET 2 AA2 4 THR B 3 TRP B 7 1 N LEU B 4 O GLU B 28
SHEET 3 AA2 4 TYR B 61 ASP B 64 -1 O TYR B 61 N GLY B 5
SHEET 4 AA2 4 HIS B 67 THR B 70 -1 O ILE B 69 N LEU B 62
LINK SG2 GSH A 301 CBM NNE B 302 1555 1555 1.86
LINK SG2 GSH B 301 CAM NNE B 302 1555 1555 1.85
CISPEP 1 ALA A 37 PRO A 38 0 -0.30
CISPEP 2 LEU A 59 PRO A 60 0 2.60
CISPEP 3 ARG A 205 PRO A 206 0 -4.56
CISPEP 4 ALA B 37 PRO B 38 0 6.66
CISPEP 5 LEU B 59 PRO B 60 0 1.35
CISPEP 6 ARG B 205 PRO B 206 0 -5.75
SITE 1 AC1 37 TYR A 6 TRP A 7 GLY A 11 TRP A 45
SITE 2 AC1 37 LYS A 49 ASN A 58 LEU A 59 GLN A 71
SITE 3 AC1 37 SER A 72 MET A 104 ASP A 105 MET A 108
SITE 4 AC1 37 HOH A 436 HOH A 443 HOH A 452 HOH A 468
SITE 5 AC1 37 HOH A 478 TYR B 6 TRP B 7 GLY B 11
SITE 6 AC1 37 LEU B 12 TRP B 45 LYS B 49 ASN B 58
SITE 7 AC1 37 LEU B 59 GLN B 71 SER B 72 MET B 104
SITE 8 AC1 37 ASP B 105 MET B 108 TYR B 115 HOH B 411
SITE 9 AC1 37 HOH B 415 HOH B 440 HOH B 442 HOH B 461
SITE 10 AC1 37 HOH B 470
SITE 1 AC2 26 TYR A 6 GLY A 11 MET A 104 ASP A 105
SITE 2 AC2 26 MET A 108 GSH A 301 HOH A 443 TYR B 6
SITE 3 AC2 26 TRP B 7 GLY B 11 LEU B 12 TRP B 45
SITE 4 AC2 26 LYS B 49 ASN B 58 LEU B 59 GLN B 71
SITE 5 AC2 26 SER B 72 MET B 104 ASP B 105 MET B 108
SITE 6 AC2 26 TYR B 115 HOH B 411 HOH B 415 HOH B 442
SITE 7 AC2 26 HOH B 461 HOH B 470
CRYST1 50.970 48.890 90.990 90.00 93.38 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.019619 0.000000 0.001159 0.00000
SCALE2 0.000000 0.020454 0.000000 0.00000
SCALE3 0.000000 0.000000 0.011009 0.00000