HEADER TRANSFERASE 29-JAN-16 5HWL TITLE HUMAN GLUTATHIONE S-TRANSFERASE MU2 COMPLEXED WITH BDEA, MONOCLINIC TITLE 2 CRYSTAL FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE MU 2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GST CLASS-MU 2,GSTM2-2; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GSTM2, GST4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS INHIBITOR, COMPLEX, TARGET, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR X.ZHANG,J.WEI,S.WU,H.P.ZHANG,M.LUO,X.L.YANG,F.LIAO,D.Q.WANG REVDAT 2 08-NOV-23 5HWL 1 REMARK REVDAT 1 08-NOV-17 5HWL 0 JRNL AUTH X.ZHANG,J.WEI,S.WU,H.P.ZHANG,M.LUO,X.L.YANG,F.LIAO,D.Q.WANG JRNL TITL HUMAN GLUTATHIONE S-TRANSFERASE MU2 COMPLEXED WITH BDEA, JRNL TITL 2 MONOCLINIC CRYSTAL FORM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 57270 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.390 REMARK 3 FREE R VALUE TEST SET COUNT : 1943 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.5693 - 3.8555 0.99 4179 159 0.1620 0.1813 REMARK 3 2 3.8555 - 3.0605 1.00 4102 146 0.1639 0.2037 REMARK 3 3 3.0605 - 2.6736 0.97 3983 135 0.1856 0.2163 REMARK 3 4 2.6736 - 2.4292 0.98 4021 134 0.1796 0.1971 REMARK 3 5 2.4292 - 2.2551 0.98 4014 142 0.1792 0.1869 REMARK 3 6 2.2551 - 2.1221 0.98 3966 148 0.1749 0.2114 REMARK 3 7 2.1221 - 2.0159 0.98 4003 146 0.1786 0.2222 REMARK 3 8 2.0159 - 1.9281 0.97 3986 145 0.1906 0.2215 REMARK 3 9 1.9281 - 1.8539 0.97 3945 122 0.1944 0.2191 REMARK 3 10 1.8539 - 1.7899 0.96 3921 144 0.1977 0.2164 REMARK 3 11 1.7899 - 1.7339 0.95 3881 124 0.2060 0.2417 REMARK 3 12 1.7339 - 1.6844 0.95 3798 130 0.1971 0.2495 REMARK 3 13 1.6844 - 1.6400 0.93 3770 139 0.2066 0.2175 REMARK 3 14 1.6400 - 1.6000 0.92 3758 129 0.2260 0.2841 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3747 REMARK 3 ANGLE : 1.064 5050 REMARK 3 CHIRALITY : 0.057 520 REMARK 3 PLANARITY : 0.006 649 REMARK 3 DIHEDRAL : 21.456 1423 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HWL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-AUG-16. REMARK 100 THE DEPOSITION ID IS D_1000217442. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 173 REMARK 200 PH : 6.0-7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 414184 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 48.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1XW5 REMARK 200 REMARK 200 REMARK: REMARK 200 THE ENTRY CONTAINS FRIEDEL PAIRS IN F_PLUS/MINUS COLUMNS AND I_ REMARK 200 PLUS/MINUS COLUMNS. REMARK 200 REMARK 200 COLUMNAR CRYSTAL, 0.1MM X 0.1 MM X 0.5 MM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.02 M MAGNESIUM CHLORIDE, 0.1M REMARK 280 HEPES,PH 6.8, POLYACRYLIC ACID SODIUM SALT 5100, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 24.44500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 28 CD OE1 OE2 REMARK 470 LYS A 30 CD CE NZ REMARK 470 LYS A 31 CG CD CE NZ REMARK 470 ARG A 42 CZ NH1 NH2 REMARK 470 GLN A 44 NE2 REMARK 470 THR A 66 OG1 CG2 REMARK 470 LYS A 82 CG CD CE NZ REMARK 470 GLU A 88 CG CD OE1 OE2 REMARK 470 LYS A 91 CD CE NZ REMARK 470 ARG A 95 CD NE CZ NH1 NH2 REMARK 470 GLN A 109 OE1 NE2 REMARK 470 LYS A 112 CD CE NZ REMARK 470 LYS A 121 CE NZ REMARK 470 GLU A 125 CG CD OE1 OE2 REMARK 470 GLN A 128 CG CD OE1 NE2 REMARK 470 GLU A 132 OE1 OE2 REMARK 470 LYS A 135 CG CD CE NZ REMARK 470 LYS A 143 CG CD CE NZ REMARK 470 LYS A 151 CG CD CE NZ REMARK 470 LYS A 198 CE NZ REMARK 470 ARG A 205 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 210 CG CD CE NZ REMARK 470 LYS A 217 CG CD CE NZ REMARK 470 ASN B 8 ND2 REMARK 470 GLU B 28 CG CD OE1 OE2 REMARK 470 LYS B 30 CG CD CE NZ REMARK 470 LYS B 31 CG CD CE NZ REMARK 470 ASP B 39 CG OD1 OD2 REMARK 470 ASP B 41 CG OD1 OD2 REMARK 470 ARG B 42 CG CD NE CZ NH1 NH2 REMARK 470 SER B 43 OG REMARK 470 GLN B 44 CG CD OE1 NE2 REMARK 470 ASN B 47 CG OD1 ND2 REMARK 470 THR B 66 OG1 CG2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS B 68 CE NZ REMARK 480 LYS B 82 CE NZ REMARK 480 ASN B 84 CG OD1 ND2 REMARK 480 GLU B 88 CB CG CD OE1 OE2 REMARK 480 LYS B 91 CG CD CE NZ REMARK 480 ARG B 95 NE CZ NH1 NH2 REMARK 480 GLN B 109 CG CD OE1 NE2 REMARK 480 LYS B 112 CG CD CE NZ REMARK 480 ASP B 118 CB CG OD1 OD2 REMARK 480 PHE B 119 CG CD2 CE2 CZ REMARK 480 LYS B 121 CB CG CD CE NZ REMARK 480 LEU B 122 CB CG CD1 CD2 REMARK 480 GLU B 125 CB CG CD OE1 OE2 REMARK 480 GLN B 128 CB CG CD OE1 NE2 REMARK 480 GLU B 132 CG CD OE1 OE2 REMARK 480 LYS B 135 CG CD CE NZ REMARK 480 GLN B 139 CD OE1 NE2 REMARK 480 LYS B 143 CD CE NZ REMARK 480 ASP B 150 CG OD1 OD2 REMARK 480 LYS B 151 CG CD CE NZ REMARK 480 LYS B 181 CD CE NZ REMARK 480 GLU B 191 CG CD OE1 OE2 REMARK 480 LYS B 192 CG CD CE NZ REMARK 480 LYS B 198 CG CD CE NZ REMARK 480 ARG B 201 CG CD NE REMARK 480 ARG B 205 CB CG CD NE CZ NH1 NH2 REMARK 480 LYS B 210 CG CD CE NZ REMARK 480 LYS B 217 CB CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 175 NZ LYS B 181 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 1 C PRO A 1 O -0.169 REMARK 500 THR A 3 C THR A 3 O -0.115 REMARK 500 LEU A 4 C LEU A 4 O -0.127 REMARK 500 GLY A 5 C GLY A 5 O -0.115 REMARK 500 TRP A 7 CZ3 TRP A 7 CH2 -0.101 REMARK 500 LEU A 12 C LEU A 12 O -0.136 REMARK 500 HIS A 14 C HIS A 14 O -0.157 REMARK 500 SER A 15 CB SER A 15 OG -0.092 REMARK 500 SER A 15 C SER A 15 O -0.141 REMARK 500 LEU A 18 C LEU A 18 O -0.128 REMARK 500 LEU A 19 C LEU A 19 O -0.148 REMARK 500 LEU A 20 C LEU A 20 O -0.141 REMARK 500 GLU A 21 CD GLU A 21 OE1 -0.085 REMARK 500 TYR A 22 C TYR A 22 O -0.117 REMARK 500 SER A 25 C SER A 25 O -0.151 REMARK 500 GLU A 28 CB GLU A 28 CG -0.119 REMARK 500 GLU A 28 C GLU A 28 O -0.143 REMARK 500 GLU A 29 CD GLU A 29 OE2 -0.123 REMARK 500 TYR A 32 CE1 TYR A 32 CZ -0.089 REMARK 500 TYR A 32 C TYR A 32 O -0.122 REMARK 500 THR A 33 C THR A 33 O -0.144 REMARK 500 TYR A 40 CG TYR A 40 CD2 -0.085 REMARK 500 TYR A 40 CG TYR A 40 CD1 -0.158 REMARK 500 TYR A 40 CZ TYR A 40 CE2 -0.164 REMARK 500 SER A 43 CB SER A 43 OG -0.149 REMARK 500 TRP A 45 CE3 TRP A 45 CZ3 -0.219 REMARK 500 TRP A 45 C TRP A 45 O -0.127 REMARK 500 GLU A 48 CD GLU A 48 OE1 -0.150 REMARK 500 GLU A 48 CD GLU A 48 OE2 -0.109 REMARK 500 PHE A 50 C PHE A 50 O -0.135 REMARK 500 LEU A 52 C LEU A 52 O -0.114 REMARK 500 GLY A 53 C GLY A 53 O -0.147 REMARK 500 PHE A 56 C PHE A 56 O -0.184 REMARK 500 LEU A 59 C LEU A 59 O -0.132 REMARK 500 PRO A 60 C PRO A 60 O -0.188 REMARK 500 TYR A 61 CG TYR A 61 CD2 -0.121 REMARK 500 TYR A 61 CE1 TYR A 61 CZ -0.132 REMARK 500 ILE A 63 C ILE A 63 O -0.137 REMARK 500 ASP A 64 CG ASP A 64 OD2 -0.150 REMARK 500 GLY A 65 C GLY A 65 O -0.141 REMARK 500 THR A 66 C THR A 66 O -0.147 REMARK 500 HIS A 67 C HIS A 67 O -0.146 REMARK 500 LYS A 68 C LYS A 68 O -0.152 REMARK 500 THR A 70 C THR A 70 O -0.140 REMARK 500 SER A 72 CB SER A 72 OG -0.110 REMARK 500 SER A 72 C SER A 72 O -0.175 REMARK 500 ASN A 73 CG ASN A 73 OD1 -0.162 REMARK 500 ASN A 73 C ASN A 73 O -0.175 REMARK 500 ILE A 75 C ILE A 75 O -0.132 REMARK 500 LEU A 76 C LEU A 76 O -0.135 REMARK 500 REMARK 500 THIS ENTRY HAS 279 BOND DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 36 CB - CG - OD1 ANGL. DEV. = 10.5 DEGREES REMARK 500 ASP A 41 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 GLU A 48 OE1 - CD - OE2 ANGL. DEV. = -7.8 DEGREES REMARK 500 LEU A 85 CB - CG - CD1 ANGL. DEV. = 12.2 DEGREES REMARK 500 LEU A 113 CB - CG - CD1 ANGL. DEV. = -10.3 DEGREES REMARK 500 ASP A 118 CB - CG - OD2 ANGL. DEV. = -6.8 DEGREES REMARK 500 PHE A 119 CB - CG - CD1 ANGL. DEV. = 4.5 DEGREES REMARK 500 LEU A 122 CB - CG - CD2 ANGL. DEV. = 13.1 DEGREES REMARK 500 MET A 133 CG - SD - CE ANGL. DEV. = -13.6 DEGREES REMARK 500 PHE A 140 CZ - CE2 - CD2 ANGL. DEV. = -7.3 DEGREES REMARK 500 ASP A 150 CB - CG - OD1 ANGL. DEV. = 7.6 DEGREES REMARK 500 ARG A 201 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 PRO A 206 C - N - CD ANGL. DEV. = 13.5 DEGREES REMARK 500 MET A 211 CG - SD - CE ANGL. DEV. = 9.7 DEGREES REMARK 500 ASP B 36 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP B 36 CB - CG - OD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 PRO B 38 C - N - CD ANGL. DEV. = 17.7 DEGREES REMARK 500 ASP B 97 CB - CG - OD2 ANGL. DEV. = -6.6 DEGREES REMARK 500 LYS B 123 CD - CE - NZ ANGL. DEV. = 14.1 DEGREES REMARK 500 LEU B 130 CB - CG - CD1 ANGL. DEV. = -11.4 DEGREES REMARK 500 ASP B 150 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 LYS B 151 N - CA - CB ANGL. DEV. = -12.1 DEGREES REMARK 500 LYS B 151 CD - CE - NZ ANGL. DEV. = -15.5 DEGREES REMARK 500 ARG B 165 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP B 175 CB - CG - OD1 ANGL. DEV. = 10.6 DEGREES REMARK 500 LEU B 203 CB - CG - CD2 ANGL. DEV. = 13.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 10 -73.08 -63.16 REMARK 500 GLN A 71 109.95 83.64 REMARK 500 ARG B 10 -72.60 -68.02 REMARK 500 GLN B 71 112.21 83.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues GSH A 301 and NNE B REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues GSH B 301 and NNE B REMARK 800 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1XW5 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH GSH DBREF 5HWL A 1 217 UNP P28161 GSTM2_HUMAN 2 218 DBREF 5HWL B 1 217 UNP P28161 GSTM2_HUMAN 2 218 SEQRES 1 A 217 PRO MET THR LEU GLY TYR TRP ASN ILE ARG GLY LEU ALA SEQRES 2 A 217 HIS SER ILE ARG LEU LEU LEU GLU TYR THR ASP SER SER SEQRES 3 A 217 TYR GLU GLU LYS LYS TYR THR MET GLY ASP ALA PRO ASP SEQRES 4 A 217 TYR ASP ARG SER GLN TRP LEU ASN GLU LYS PHE LYS LEU SEQRES 5 A 217 GLY LEU ASP PHE PRO ASN LEU PRO TYR LEU ILE ASP GLY SEQRES 6 A 217 THR HIS LYS ILE THR GLN SER ASN ALA ILE LEU ARG TYR SEQRES 7 A 217 ILE ALA ARG LYS HIS ASN LEU CYS GLY GLU SER GLU LYS SEQRES 8 A 217 GLU GLN ILE ARG GLU ASP ILE LEU GLU ASN GLN PHE MET SEQRES 9 A 217 ASP SER ARG MET GLN LEU ALA LYS LEU CYS TYR ASP PRO SEQRES 10 A 217 ASP PHE GLU LYS LEU LYS PRO GLU TYR LEU GLN ALA LEU SEQRES 11 A 217 PRO GLU MET LEU LYS LEU TYR SER GLN PHE LEU GLY LYS SEQRES 12 A 217 GLN PRO TRP PHE LEU GLY ASP LYS ILE THR PHE VAL ASP SEQRES 13 A 217 PHE ILE ALA TYR ASP VAL LEU GLU ARG ASN GLN VAL PHE SEQRES 14 A 217 GLU PRO SER CYS LEU ASP ALA PHE PRO ASN LEU LYS ASP SEQRES 15 A 217 PHE ILE SER ARG PHE GLU GLY LEU GLU LYS ILE SER ALA SEQRES 16 A 217 TYR MET LYS SER SER ARG PHE LEU PRO ARG PRO VAL PHE SEQRES 17 A 217 THR LYS MET ALA VAL TRP GLY ASN LYS SEQRES 1 B 217 PRO MET THR LEU GLY TYR TRP ASN ILE ARG GLY LEU ALA SEQRES 2 B 217 HIS SER ILE ARG LEU LEU LEU GLU TYR THR ASP SER SER SEQRES 3 B 217 TYR GLU GLU LYS LYS TYR THR MET GLY ASP ALA PRO ASP SEQRES 4 B 217 TYR ASP ARG SER GLN TRP LEU ASN GLU LYS PHE LYS LEU SEQRES 5 B 217 GLY LEU ASP PHE PRO ASN LEU PRO TYR LEU ILE ASP GLY SEQRES 6 B 217 THR HIS LYS ILE THR GLN SER ASN ALA ILE LEU ARG TYR SEQRES 7 B 217 ILE ALA ARG LYS HIS ASN LEU CYS GLY GLU SER GLU LYS SEQRES 8 B 217 GLU GLN ILE ARG GLU ASP ILE LEU GLU ASN GLN PHE MET SEQRES 9 B 217 ASP SER ARG MET GLN LEU ALA LYS LEU CYS TYR ASP PRO SEQRES 10 B 217 ASP PHE GLU LYS LEU LYS PRO GLU TYR LEU GLN ALA LEU SEQRES 11 B 217 PRO GLU MET LEU LYS LEU TYR SER GLN PHE LEU GLY LYS SEQRES 12 B 217 GLN PRO TRP PHE LEU GLY ASP LYS ILE THR PHE VAL ASP SEQRES 13 B 217 PHE ILE ALA TYR ASP VAL LEU GLU ARG ASN GLN VAL PHE SEQRES 14 B 217 GLU PRO SER CYS LEU ASP ALA PHE PRO ASN LEU LYS ASP SEQRES 15 B 217 PHE ILE SER ARG PHE GLU GLY LEU GLU LYS ILE SER ALA SEQRES 16 B 217 TYR MET LYS SER SER ARG PHE LEU PRO ARG PRO VAL PHE SEQRES 17 B 217 THR LYS MET ALA VAL TRP GLY ASN LYS HET GSH A 301 20 HET GSH B 301 20 HET NNE B 302 42 HETNAM GSH GLUTATHIONE HETNAM NNE N,N'-(BUTANE-1,4-DIYL)BIS{2-[2,3-DICHLORO-4-(2- HETNAM 2 NNE METHYLIDENEBUTANOYL)PHENOXY]ACETAMIDE} FORMUL 3 GSH 2(C10 H17 N3 O6 S) FORMUL 5 NNE C30 H32 CL4 N2 O6 FORMUL 6 HOH *223(H2 O) HELIX 1 AA1 ARG A 10 LEU A 12 5 3 HELIX 2 AA2 ALA A 13 THR A 23 1 11 HELIX 3 AA3 ARG A 42 ASN A 47 1 6 HELIX 4 AA4 GLN A 71 HIS A 83 1 13 HELIX 5 AA5 SER A 89 TYR A 115 1 27 HELIX 6 AA6 ASP A 118 GLY A 142 1 25 HELIX 7 AA7 THR A 153 GLU A 170 1 18 HELIX 8 AA8 PHE A 177 GLY A 189 1 13 HELIX 9 AA9 LEU A 190 LYS A 198 1 9 HELIX 10 AB1 ARG B 10 LEU B 12 5 3 HELIX 11 AB2 ALA B 13 THR B 23 1 11 HELIX 12 AB3 ARG B 42 ASN B 47 1 6 HELIX 13 AB4 GLN B 71 HIS B 83 1 13 HELIX 14 AB5 SER B 89 TYR B 115 1 27 HELIX 15 AB6 ASP B 118 GLY B 142 1 25 HELIX 16 AB7 THR B 153 GLU B 170 1 18 HELIX 17 AB8 PHE B 177 LEU B 190 1 14 HELIX 18 AB9 LEU B 190 LYS B 198 1 9 SHEET 1 AA1 4 TYR A 27 TYR A 32 0 SHEET 2 AA1 4 MET A 2 TRP A 7 1 N LEU A 4 O LYS A 30 SHEET 3 AA1 4 TYR A 61 ASP A 64 -1 O TYR A 61 N GLY A 5 SHEET 4 AA1 4 HIS A 67 THR A 70 -1 O ILE A 69 N LEU A 62 SHEET 1 AA2 4 GLU B 28 TYR B 32 0 SHEET 2 AA2 4 THR B 3 TRP B 7 1 N LEU B 4 O GLU B 28 SHEET 3 AA2 4 TYR B 61 ASP B 64 -1 O TYR B 61 N GLY B 5 SHEET 4 AA2 4 HIS B 67 THR B 70 -1 O ILE B 69 N LEU B 62 LINK SG2 GSH A 301 CBM NNE B 302 1555 1555 1.86 LINK SG2 GSH B 301 CAM NNE B 302 1555 1555 1.85 CISPEP 1 ALA A 37 PRO A 38 0 -0.30 CISPEP 2 LEU A 59 PRO A 60 0 2.60 CISPEP 3 ARG A 205 PRO A 206 0 -4.56 CISPEP 4 ALA B 37 PRO B 38 0 6.66 CISPEP 5 LEU B 59 PRO B 60 0 1.35 CISPEP 6 ARG B 205 PRO B 206 0 -5.75 SITE 1 AC1 37 TYR A 6 TRP A 7 GLY A 11 TRP A 45 SITE 2 AC1 37 LYS A 49 ASN A 58 LEU A 59 GLN A 71 SITE 3 AC1 37 SER A 72 MET A 104 ASP A 105 MET A 108 SITE 4 AC1 37 HOH A 436 HOH A 443 HOH A 452 HOH A 468 SITE 5 AC1 37 HOH A 478 TYR B 6 TRP B 7 GLY B 11 SITE 6 AC1 37 LEU B 12 TRP B 45 LYS B 49 ASN B 58 SITE 7 AC1 37 LEU B 59 GLN B 71 SER B 72 MET B 104 SITE 8 AC1 37 ASP B 105 MET B 108 TYR B 115 HOH B 411 SITE 9 AC1 37 HOH B 415 HOH B 440 HOH B 442 HOH B 461 SITE 10 AC1 37 HOH B 470 SITE 1 AC2 26 TYR A 6 GLY A 11 MET A 104 ASP A 105 SITE 2 AC2 26 MET A 108 GSH A 301 HOH A 443 TYR B 6 SITE 3 AC2 26 TRP B 7 GLY B 11 LEU B 12 TRP B 45 SITE 4 AC2 26 LYS B 49 ASN B 58 LEU B 59 GLN B 71 SITE 5 AC2 26 SER B 72 MET B 104 ASP B 105 MET B 108 SITE 6 AC2 26 TYR B 115 HOH B 411 HOH B 415 HOH B 442 SITE 7 AC2 26 HOH B 461 HOH B 470 CRYST1 50.970 48.890 90.990 90.00 93.38 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019619 0.000000 0.001159 0.00000 SCALE2 0.000000 0.020454 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011009 0.00000