HEADER TRANSFERASE 29-JAN-16 5HWR TITLE MVAS IN COMPLEX WITH COENZYME A COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYDROXYMETHYLGLUTARYL-COA SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.3.3.10; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYXOCOCCUS XANTHUS (STRAIN DK 1622); SOURCE 3 ORGANISM_TAXID: 246197; SOURCE 4 STRAIN: DK 1622; SOURCE 5 GENE: MVAS, MXAN_4267; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET19M KEYWDS MVAS, MYXOCOCCUS XANTHUS, BIOSYNTHESIS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.BOCK,J.KASTEN,W.BLANKENFELDT REVDAT 2 13-JUL-16 5HWR 1 JRNL REVDAT 1 11-MAY-16 5HWR 0 JRNL AUTH T.BOCK,J.KASTEN,R.MULLER,W.BLANKENFELDT JRNL TITL CRYSTAL STRUCTURE OF THE HMG-COA SYNTHASE MVAS FROM THE JRNL TITL 2 GRAM-NEGATIVE BACTERIUM MYXOCOCCUS XANTHUS. JRNL REF CHEMBIOCHEM V. 17 1257 2016 JRNL REFN ESSN 1439-7633 JRNL PMID 27124816 JRNL DOI 10.1002/CBIC.201600070 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 71266 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.126 REMARK 3 R VALUE (WORKING SET) : 0.124 REMARK 3 FREE R VALUE : 0.157 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 3589 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.7133 - 4.4421 1.00 2960 151 0.1667 0.1876 REMARK 3 2 4.4421 - 3.5264 1.00 2735 145 0.1209 0.1284 REMARK 3 3 3.5264 - 3.0808 1.00 2675 157 0.1291 0.1592 REMARK 3 4 3.0808 - 2.7992 1.00 2655 151 0.1316 0.1538 REMARK 3 5 2.7992 - 2.5986 1.00 2654 137 0.1233 0.1482 REMARK 3 6 2.5986 - 2.4454 1.00 2619 133 0.1140 0.1615 REMARK 3 7 2.4454 - 2.3229 1.00 2656 133 0.1061 0.1441 REMARK 3 8 2.3229 - 2.2218 1.00 2579 134 0.1030 0.1232 REMARK 3 9 2.2218 - 2.1363 1.00 2625 146 0.1018 0.1457 REMARK 3 10 2.1363 - 2.0626 1.00 2583 148 0.1026 0.1364 REMARK 3 11 2.0626 - 1.9981 1.00 2596 143 0.1045 0.1594 REMARK 3 12 1.9981 - 1.9410 1.00 2569 137 0.1053 0.1353 REMARK 3 13 1.9410 - 1.8899 1.00 2589 131 0.1027 0.1446 REMARK 3 14 1.8899 - 1.8438 1.00 2576 127 0.1049 0.1413 REMARK 3 15 1.8438 - 1.8018 1.00 2570 154 0.1098 0.1557 REMARK 3 16 1.8018 - 1.7635 1.00 2567 133 0.1164 0.1517 REMARK 3 17 1.7635 - 1.7282 1.00 2568 140 0.1181 0.1815 REMARK 3 18 1.7282 - 1.6956 1.00 2552 130 0.1244 0.1665 REMARK 3 19 1.6956 - 1.6653 1.00 2528 132 0.1287 0.1823 REMARK 3 20 1.6653 - 1.6371 1.00 2579 142 0.1270 0.1653 REMARK 3 21 1.6371 - 1.6107 1.00 2547 127 0.1341 0.2093 REMARK 3 22 1.6107 - 1.5859 0.99 2530 119 0.1299 0.1854 REMARK 3 23 1.5859 - 1.5626 1.00 2549 150 0.1408 0.1996 REMARK 3 24 1.5626 - 1.5406 0.99 2563 128 0.1531 0.2012 REMARK 3 25 1.5406 - 1.5198 0.99 2503 140 0.1579 0.2428 REMARK 3 26 1.5198 - 1.5000 0.99 2550 121 0.1636 0.1948 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.020 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.77 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3320 REMARK 3 ANGLE : 1.311 4543 REMARK 3 CHIRALITY : 0.202 506 REMARK 3 PLANARITY : 0.008 583 REMARK 3 DIHEDRAL : 14.238 1972 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5HWR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JAN-16. REMARK 100 THE DEPOSITION ID IS D_1000217870. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.12 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71372 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 41.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 16.00 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 15.30 REMARK 200 R MERGE FOR SHELL (I) : 1.35200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2 M (NH4)2SO4, 0.2 M DISODIUM REMARK 280 TARTRATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 92.29967 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 184.59933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 138.44950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 230.74917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 46.14983 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 92.29967 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 184.59933 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 230.74917 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 138.44950 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 46.14983 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 C2 GOL A 502 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 732 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 929 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 933 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 2 CG CD CE NZ REMARK 470 LYS A 3 CG CD CE NZ REMARK 470 GLU A 225 CG CD OE1 OE2 REMARK 470 ARG A 234 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 255 CG CD CE NZ REMARK 470 ASP A 274 CG OD1 OD2 REMARK 470 GLU A 281 CG CD OE1 OE2 REMARK 470 ARG A 372 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 374 CG CD OE1 OE2 REMARK 470 ARG A 408 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 409 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR A 249 HD1 HIS A 261 1.13 REMARK 500 HH22 ARG A 258 O HOH A 603 1.43 REMARK 500 H ALA A 154 O4 SO4 A 505 1.43 REMARK 500 HE ARG A 258 O HOH A 606 1.55 REMARK 500 OG1 THR A 105 O HOH A 601 1.84 REMARK 500 O HOH A 711 O HOH A 881 1.95 REMARK 500 OE1 GLU A 355 O HOH A 602 1.96 REMARK 500 O HOH A 701 O HOH A 896 2.04 REMARK 500 O HOH A 621 O HOH A 668 2.12 REMARK 500 O HOH A 886 O HOH A 909 2.12 REMARK 500 O HOH A 834 O HOH A 885 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 697 O HOH A 873 8555 2.04 REMARK 500 O HOH A 641 O HOH A 882 6555 2.04 REMARK 500 O HOH A 611 O HOH A 902 8445 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 373 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 42 -55.42 -126.43 REMARK 500 HIS A 113 80.58 -163.26 REMARK 500 ALA A 114 -128.95 43.37 REMARK 500 GLN A 171 66.95 -119.11 REMARK 500 GLN A 171 66.26 -118.60 REMARK 500 TYR A 190 63.85 -110.39 REMARK 500 SER A 236 -154.91 -130.51 REMARK 500 SER A 289 114.14 -31.48 REMARK 500 VAL A 297 -33.76 -134.14 REMARK 500 TYR A 311 -110.17 43.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue COA A 507 DBREF 5HWR A 1 418 UNP Q1D4I1 Q1D4I1_MYXXD 1 418 SEQADV 5HWR GLY A -1 UNP Q1D4I1 EXPRESSION TAG SEQADV 5HWR HIS A 0 UNP Q1D4I1 EXPRESSION TAG SEQRES 1 A 420 GLY HIS MET LYS LYS ARG VAL GLY ILE GLU ALA LEU ALA SEQRES 2 A 420 VAL ALA VAL PRO SER ARG TYR VAL ASP ILE GLU ASP LEU SEQRES 3 A 420 ALA ARG ALA ARG GLY VAL ASP PRO ALA LYS TYR THR ALA SEQRES 4 A 420 GLY LEU GLY ALA ARG GLU MET ALA VAL THR ASP PRO GLY SEQRES 5 A 420 GLU ASP THR VAL ALA LEU ALA ALA THR ALA ALA ALA ARG SEQRES 6 A 420 LEU ILE ARG GLN GLN ASP VAL ASP PRO SER ARG ILE GLY SEQRES 7 A 420 MET LEU VAL VAL GLY THR GLU THR GLY ILE ASP HIS SER SEQRES 8 A 420 LYS PRO VAL ALA SER HIS VAL GLN GLY LEU LEU LYS LEU SEQRES 9 A 420 PRO ARG THR MET ARG THR TYR ASP THR GLN HIS ALA CSD SEQRES 10 A 420 TYR GLY GLY THR ALA GLY LEU MET ALA ALA VAL GLU TRP SEQRES 11 A 420 ILE ALA SER GLY ALA GLY ALA GLY LYS VAL ALA VAL VAL SEQRES 12 A 420 VAL CYS SER ASP ILE ALA ARG TYR GLY LEU ASN THR ALA SEQRES 13 A 420 GLY GLU PRO THR GLN GLY GLY GLY ALA VAL ALA LEU LEU SEQRES 14 A 420 VAL SER GLU GLN PRO ASP LEU LEU ALA MET ASP VAL GLY SEQRES 15 A 420 LEU ASN GLY VAL CYS SER MET ASP VAL TYR ASP PHE TRP SEQRES 16 A 420 ARG PRO VAL GLY ARG ARG GLU ALA LEU VAL ASP GLY HIS SEQRES 17 A 420 TYR SER ILE THR CYS TYR LEU GLU ALA LEU SER GLY ALA SEQRES 18 A 420 TYR ARG GLY TRP ARG GLU LYS ALA LEU ALA ALA GLY LEU SEQRES 19 A 420 VAL ARG TRP SER ASP ALA LEU PRO GLY GLU GLN LEU ALA SEQRES 20 A 420 ARG ILE ALA TYR HIS VAL PRO PHE CYS LYS MET ALA ARG SEQRES 21 A 420 LYS ALA HIS THR GLN LEU ARG LEU CYS ASP LEU GLU ASP SEQRES 22 A 420 ALA ALA ASP ALA ALA ALA SER THR PRO GLU SER ARG GLU SEQRES 23 A 420 ALA GLN ALA LYS SER ALA ALA SER TYR ASP ALA GLN VAL SEQRES 24 A 420 ALA THR SER LEU GLY LEU ASN SER ARG ILE GLY ASN VAL SEQRES 25 A 420 TYR THR ALA SER LEU TYR LEU ALA LEU ALA GLY LEU LEU SEQRES 26 A 420 GLN HIS GLU ALA GLY ALA LEU ALA GLY GLN ARG ILE GLY SEQRES 27 A 420 LEU LEU SER TYR GLY SER GLY CYS ALA ALA GLU PHE TYR SEQRES 28 A 420 SER GLY THR VAL GLY GLU LYS ALA ALA GLU ARG MET ALA SEQRES 29 A 420 LYS ALA ASP LEU GLU ALA VAL LEU ALA ARG ARG GLU ARG SEQRES 30 A 420 VAL SER ILE GLU GLU TYR GLU ARG LEU MET LYS LEU PRO SEQRES 31 A 420 ALA ASP ALA PRO GLU ALA VAL ALA PRO SER PRO GLY ALA SEQRES 32 A 420 PHE ARG LEU THR GLU ILE ARG ASP HIS ARG ARG GLN TYR SEQRES 33 A 420 ALA GLU GLY ASN MODRES 5HWR CSD A 115 CYS MODIFIED RESIDUE HET CSD A 115 8 HET GOL A 501 14 HET GOL A 502 14 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 A 505 5 HET SO4 A 506 5 HET COA A 507 160 HETNAM CSD 3-SULFINOALANINE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM COA COENZYME A HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CSD C3 H7 N O4 S FORMUL 2 GOL 2(C3 H8 O3) FORMUL 4 SO4 4(O4 S 2-) FORMUL 8 COA C21 H36 N7 O16 P3 S FORMUL 9 HOH *359(H2 O) HELIX 1 AA1 ILE A 21 ARG A 28 1 8 HELIX 2 AA2 ASP A 31 ALA A 37 1 7 HELIX 3 AA3 ASP A 52 ASP A 69 1 18 HELIX 4 AA4 ASP A 71 SER A 73 5 3 HELIX 5 AA5 PRO A 91 LEU A 100 1 10 HELIX 6 AA6 HIS A 113 CSD A 115 5 3 HELIX 7 AA7 TYR A 116 SER A 131 1 16 HELIX 8 AA8 GLY A 155 GLN A 159 5 5 HELIX 9 AA9 ASP A 204 ALA A 230 1 27 HELIX 10 AB1 LEU A 239 LEU A 244 5 6 HELIX 11 AB2 CYS A 254 ALA A 272 1 19 HELIX 12 AB3 ASP A 274 SER A 278 5 5 HELIX 13 AB4 THR A 279 LYS A 288 1 10 HELIX 14 AB5 SER A 289 VAL A 297 1 9 HELIX 15 AB6 ALA A 298 LEU A 301 5 4 HELIX 16 AB7 LEU A 303 GLY A 308 1 6 HELIX 17 AB8 VAL A 310 THR A 312 5 3 HELIX 18 AB9 ALA A 313 ALA A 331 1 19 HELIX 19 AC1 LYS A 356 ASP A 365 1 10 HELIX 20 AC2 ASP A 365 ARG A 372 1 8 HELIX 21 AC3 SER A 377 LEU A 387 1 11 SHEET 1 AA1 8 ARG A 107 THR A 111 0 SHEET 2 AA1 8 ILE A 75 GLY A 81 1 N LEU A 78 O ARG A 107 SHEET 3 AA1 8 VAL A 138 ALA A 147 1 O VAL A 138 N GLY A 76 SHEET 4 AA1 8 GLY A 160 SER A 169 -1 O LEU A 166 N VAL A 141 SHEET 5 AA1 8 GLY A 6 ALA A 13 -1 N GLU A 8 O LEU A 167 SHEET 6 AA1 8 LEU A 175 MET A 177 -1 O LEU A 175 N ILE A 7 SHEET 7 AA1 8 ALA A 345 THR A 352 -1 O THR A 352 N ALA A 176 SHEET 8 AA1 8 GLY A 183 SER A 186 -1 N GLY A 183 O PHE A 348 SHEET 1 AA2 9 ARG A 107 THR A 111 0 SHEET 2 AA2 9 ILE A 75 GLY A 81 1 N LEU A 78 O ARG A 107 SHEET 3 AA2 9 VAL A 138 ALA A 147 1 O VAL A 138 N GLY A 76 SHEET 4 AA2 9 GLY A 160 SER A 169 -1 O LEU A 166 N VAL A 141 SHEET 5 AA2 9 GLY A 6 ALA A 13 -1 N GLU A 8 O LEU A 167 SHEET 6 AA2 9 LEU A 175 MET A 177 -1 O LEU A 175 N ILE A 7 SHEET 7 AA2 9 ALA A 345 THR A 352 -1 O THR A 352 N ALA A 176 SHEET 8 AA2 9 ARG A 334 GLY A 341 -1 N SER A 339 O GLU A 347 SHEET 9 AA2 9 ILE A 247 TYR A 249 1 N ALA A 248 O GLY A 336 SHEET 1 AA3 3 GLU A 43 VAL A 46 0 SHEET 2 AA3 3 ARG A 17 ASP A 20 -1 N VAL A 19 O MET A 44 SHEET 3 AA3 3 GLU A 374 ARG A 375 1 O GLU A 374 N TYR A 18 SHEET 1 AA4 2 PHE A 192 TRP A 193 0 SHEET 2 AA4 2 LEU A 202 VAL A 203 -1 O LEU A 202 N TRP A 193 SHEET 1 AA5 2 PHE A 402 ARG A 408 0 SHEET 2 AA5 2 ARG A 411 GLU A 416 -1 O GLN A 413 N THR A 405 LINK C ALA A 114 N CSD A 115 1555 1555 1.33 LINK C CSD A 115 N TYR A 116 1555 1555 1.31 CISPEP 1 GLY A 343 CYS A 344 0 -1.37 SITE 1 AC1 5 THR A 84 GLY A 85 HIS A 88 ARG A 194 SITE 2 AC1 5 HOH A 727 SITE 1 AC2 5 LYS A 101 LEU A 102 HOH A 623 HOH A 826 SITE 2 AC2 5 HOH A 871 SITE 1 AC3 5 ARG A 246 GLN A 333 HOH A 618 HOH A 841 SITE 2 AC3 5 HOH A 853 SITE 1 AC4 7 GLN A 324 ASP A 365 LEU A 366 GLU A 367 SITE 2 AC4 7 HOH A 666 HOH A 722 HOH A 789 SITE 1 AC5 4 THR A 153 ALA A 154 HOH A 625 HOH A 860 SITE 1 AC6 1 ARG A 42 SITE 1 AC7 29 ASP A 31 ALA A 33 LYS A 34 GLY A 38 SITE 2 AC7 29 TYR A 149 ALA A 154 GLY A 155 THR A 158 SITE 3 AC7 29 GLY A 205 HIS A 206 SER A 208 ILE A 209 SITE 4 AC7 29 TYR A 212 PRO A 252 PHE A 253 MET A 256 SITE 5 AC7 29 LYS A 259 HOH A 610 HOH A 627 HOH A 680 SITE 6 AC7 29 HOH A 695 HOH A 710 HOH A 714 HOH A 752 SITE 7 AC7 29 HOH A 800 HOH A 803 HOH A 833 HOH A 842 SITE 8 AC7 29 HOH A 870 CRYST1 73.162 73.162 276.899 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013668 0.007891 0.000000 0.00000 SCALE2 0.000000 0.015783 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003611 0.00000