HEADER TRANSFERASE 05-FEB-16 5I1F TITLE CRYSTAL STRUCTURE OF UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE FROM TITLE 2 BURKHOLDERIA VIETNAMIENSIS IN COMPLEX WITH URIDINE-5'-DIPHOSPHATE- TITLE 3 GLUCOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BUVIA.00118.E.B1; COMPND 5 SYNONYM: UDP-GLUCOSE PYROPHOSPHORYLASE; COMPND 6 EC: 2.7.7.9; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA VIETNAMIENSIS (STRAIN G4 / LMG SOURCE 3 22486); SOURCE 4 ORGANISM_TAXID: 269482; SOURCE 5 STRAIN: G4 / LMG 22486; SOURCE 6 GENE: BCEP1808_6508; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: BUVIA.00118.E.B1 KEYWDS UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE, UDP-GLUCOSE KEYWDS 2 PYROPHOSPHORYLASE, UDP-GLUCOSE, URIDYLYLTRANSFERASE, KEYWDS 3 PYROPHOSPHORYLASE, BURKHOLDERIA VIETNAMIENSIS, STRUCTURAL GENOMICS, KEYWDS 4 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID, KEYWDS 5 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 27-SEP-23 5I1F 1 REMARK LINK REVDAT 1 02-MAR-16 5I1F 0 JRNL AUTH J.ABENDROTH,D.D.LORIMER,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF UTP-GLUCOSE-1-PHOSPHATE JRNL TITL 2 URIDYLYLTRANSFERASE FROM BURKHOLDERIA VIETNAMIENSIS IN JRNL TITL 3 COMPLEX WITH URIDINE-5'-DIPHOSPHATE-GLUCOSE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 30327 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.490 REMARK 3 FREE R VALUE TEST SET COUNT : 1968 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.0000 - 5.1788 0.99 2267 151 0.1800 0.2157 REMARK 3 2 5.1788 - 4.1117 1.00 2080 153 0.1376 0.1722 REMARK 3 3 4.1117 - 3.5923 1.00 2056 151 0.1479 0.1754 REMARK 3 4 3.5923 - 3.2640 1.00 2005 156 0.1712 0.1954 REMARK 3 5 3.2640 - 3.0301 1.00 2012 150 0.1883 0.2199 REMARK 3 6 3.0301 - 2.8515 1.00 2037 132 0.1978 0.2212 REMARK 3 7 2.8515 - 2.7087 1.00 1996 149 0.1923 0.2143 REMARK 3 8 2.7087 - 2.5909 1.00 1984 144 0.1847 0.2112 REMARK 3 9 2.5909 - 2.4911 1.00 1987 120 0.1824 0.2467 REMARK 3 10 2.4911 - 2.4052 1.00 2004 144 0.1816 0.1899 REMARK 3 11 2.4052 - 2.3300 1.00 1980 136 0.1806 0.2237 REMARK 3 12 2.3300 - 2.2634 1.00 1984 135 0.1783 0.2121 REMARK 3 13 2.2634 - 2.2038 1.00 1968 128 0.1886 0.2321 REMARK 3 14 2.2038 - 2.1500 1.00 1999 119 0.2086 0.2438 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2361 REMARK 3 ANGLE : 0.889 3215 REMARK 3 CHIRALITY : 0.057 365 REMARK 3 PLANARITY : 0.006 421 REMARK 3 DIHEDRAL : 17.110 1445 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.3381 15.4500 138.3296 REMARK 3 T TENSOR REMARK 3 T11: 0.4345 T22: 0.1378 REMARK 3 T33: 0.2181 T12: 0.0819 REMARK 3 T13: 0.0293 T23: -0.0293 REMARK 3 L TENSOR REMARK 3 L11: 2.4063 L22: 2.0870 REMARK 3 L33: 3.2611 L12: -0.0680 REMARK 3 L13: 0.6515 L23: 0.6063 REMARK 3 S TENSOR REMARK 3 S11: -0.0576 S12: -0.1822 S13: 0.1530 REMARK 3 S21: 0.0880 S22: 0.1752 S23: -0.0345 REMARK 3 S31: -0.5658 S32: -0.0565 S33: -0.0932 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.4229 7.1641 133.1889 REMARK 3 T TENSOR REMARK 3 T11: 0.4017 T22: 0.2151 REMARK 3 T33: 0.2264 T12: 0.0682 REMARK 3 T13: 0.0060 T23: -0.0203 REMARK 3 L TENSOR REMARK 3 L11: 4.4001 L22: 2.1910 REMARK 3 L33: 2.3814 L12: 1.0375 REMARK 3 L13: -0.8395 L23: -0.5119 REMARK 3 S TENSOR REMARK 3 S11: -0.2263 S12: 0.3627 S13: -0.2051 REMARK 3 S21: -0.1991 S22: 0.1033 S23: -0.1476 REMARK 3 S31: 0.1508 S32: 0.3464 S33: 0.1745 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.2453 10.6073 143.3267 REMARK 3 T TENSOR REMARK 3 T11: 0.3795 T22: 0.1894 REMARK 3 T33: 0.2097 T12: 0.0706 REMARK 3 T13: -0.0416 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 2.6566 L22: 1.1821 REMARK 3 L33: 2.2426 L12: -0.3145 REMARK 3 L13: -1.5176 L23: 0.0283 REMARK 3 S TENSOR REMARK 3 S11: -0.0933 S12: -0.2021 S13: -0.0464 REMARK 3 S21: 0.2066 S22: 0.1364 S23: 0.0379 REMARK 3 S31: -0.2438 S32: 0.2571 S33: -0.0109 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 142 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.8790 26.2120 154.0692 REMARK 3 T TENSOR REMARK 3 T11: 0.8315 T22: 0.2299 REMARK 3 T33: 0.3786 T12: 0.3071 REMARK 3 T13: 0.0816 T23: -0.0808 REMARK 3 L TENSOR REMARK 3 L11: 2.2846 L22: 2.2615 REMARK 3 L33: 0.9661 L12: -1.5112 REMARK 3 L13: -0.8582 L23: 0.2713 REMARK 3 S TENSOR REMARK 3 S11: 0.0062 S12: -0.3646 S13: 0.5910 REMARK 3 S21: 0.2419 S22: 0.1339 S23: -0.0234 REMARK 3 S31: -0.9105 S32: 0.0835 S33: -0.0266 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 207 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.6120 14.4385 154.4332 REMARK 3 T TENSOR REMARK 3 T11: 0.5103 T22: 0.3042 REMARK 3 T33: 0.3299 T12: 0.1959 REMARK 3 T13: 0.0571 T23: 0.0266 REMARK 3 L TENSOR REMARK 3 L11: 4.4517 L22: 4.7405 REMARK 3 L33: 1.2907 L12: -0.9941 REMARK 3 L13: -0.1782 L23: 0.6918 REMARK 3 S TENSOR REMARK 3 S11: -0.0839 S12: -0.2512 S13: -0.2252 REMARK 3 S21: 0.2539 S22: 0.1076 S23: 0.6712 REMARK 3 S31: -0.3338 S32: -0.4167 S33: 0.0102 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 249 THROUGH 271 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.6789 29.0812 136.0169 REMARK 3 T TENSOR REMARK 3 T11: 1.0793 T22: 0.0230 REMARK 3 T33: 0.4002 T12: 0.0956 REMARK 3 T13: 0.0582 T23: -0.0719 REMARK 3 L TENSOR REMARK 3 L11: 0.4794 L22: 1.2641 REMARK 3 L33: 0.8326 L12: -0.3045 REMARK 3 L13: -0.3456 L23: 0.6801 REMARK 3 S TENSOR REMARK 3 S11: 0.1300 S12: -0.1421 S13: 0.2813 REMARK 3 S21: 0.1957 S22: 0.1672 S23: -0.0796 REMARK 3 S31: -0.4837 S32: 0.1147 S33: 0.0506 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 272 THROUGH 289 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.6045 36.9311 125.0489 REMARK 3 T TENSOR REMARK 3 T11: 1.2787 T22: 0.3616 REMARK 3 T33: 0.7068 T12: -0.3809 REMARK 3 T13: 0.1431 T23: -0.1535 REMARK 3 L TENSOR REMARK 3 L11: 3.9709 L22: 6.1340 REMARK 3 L33: 3.3438 L12: 2.2035 REMARK 3 L13: 1.8839 L23: 0.3997 REMARK 3 S TENSOR REMARK 3 S11: 0.4928 S12: -0.4165 S13: 0.3901 REMARK 3 S21: 0.2324 S22: -0.0826 S23: 0.2914 REMARK 3 S31: -0.6411 S32: 0.2303 S33: -0.2113 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5I1F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218106. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30405 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.54200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.560 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2UX8, CHAIN A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MCSG1 SCREEN A4: 2500MM NACL, 200MM REMARK 280 MGCL2, 100MM TRIS BASE/HCL PH 7.0; BUVIA.00118.E.B1.PS02498 AT REMARK 280 27.5MG/ML + 4MM GLUCOSE-1-PHOSPHATE + 4MM UTP + 4MM MGCL2; ; REMARK 280 TRAY: 267283A4, PUCK SBQ8-1, CRYO: 20% EG, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 168.46667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 84.23333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 168.46667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 84.23333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 168.46667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 84.23333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 168.46667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 84.23333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -212.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 84.90000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 252.70000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 539 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 GLU A 290 REMARK 465 GLN A 291 REMARK 465 LEU A 292 REMARK 465 VAL A 293 REMARK 465 VAL A 294 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 0 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 3 CG CD CE NZ REMARK 470 LYS A 85 CG CD CE NZ REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 LYS A 222 CG CD CE NZ REMARK 470 MET A 288 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 33 -63.13 63.97 REMARK 500 ASP A 34 11.27 -141.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 133 OD1 REMARK 620 2 UPG A 301 O1A 91.8 REMARK 620 3 UPG A 301 O2B 175.1 85.5 REMARK 620 4 HOH A 418 O 81.6 100.6 95.0 REMARK 620 5 HOH A 465 O 93.9 173.7 89.1 83.0 REMARK 620 6 HOH A 506 O 94.4 85.1 89.3 173.1 91.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 UPG A 301 O2A REMARK 620 2 HOH A 419 O 168.3 REMARK 620 3 HOH A 427 O 92.2 92.2 REMARK 620 4 HOH A 455 O 82.4 86.9 87.3 REMARK 620 5 HOH A 488 O 86.9 102.9 100.3 167.1 REMARK 620 6 HOH A 510 O 85.8 88.1 171.2 83.9 88.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UPG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 309 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BUVIA.00118.E RELATED DB: TARGETTRACK DBREF 5I1F A 1 294 UNP A4JT02 A4JT02_BURVG 1 294 SEQADV 5I1F MET A -7 UNP A4JT02 INITIATING METHIONINE SEQADV 5I1F ALA A -6 UNP A4JT02 EXPRESSION TAG SEQADV 5I1F HIS A -5 UNP A4JT02 EXPRESSION TAG SEQADV 5I1F HIS A -4 UNP A4JT02 EXPRESSION TAG SEQADV 5I1F HIS A -3 UNP A4JT02 EXPRESSION TAG SEQADV 5I1F HIS A -2 UNP A4JT02 EXPRESSION TAG SEQADV 5I1F HIS A -1 UNP A4JT02 EXPRESSION TAG SEQADV 5I1F HIS A 0 UNP A4JT02 EXPRESSION TAG SEQRES 1 A 302 MET ALA HIS HIS HIS HIS HIS HIS MET LEU LYS VAL THR SEQRES 2 A 302 LYS ALA VAL PHE PRO VAL ALA GLY LEU GLY THR ARG PHE SEQRES 3 A 302 LEU PRO ALA THR LYS ALA SER PRO LYS GLU MET LEU PRO SEQRES 4 A 302 VAL VAL ASP LYS PRO LEU ILE GLN TYR ALA VAL GLU GLU SEQRES 5 A 302 ALA ILE GLU ALA GLY ILE THR GLU MET ILE PHE VAL THR SEQRES 6 A 302 GLY ARG SER LYS ARG ALA ILE GLU ASP HIS PHE ASP LYS SEQRES 7 A 302 SER TYR GLU ILE GLU ALA GLU LEU GLU ALA ARG GLY LYS SEQRES 8 A 302 GLU LYS LEU LEU SER LEU VAL ARG SER ILE LYS PRO SER SEQRES 9 A 302 HIS VAL ASP CYS PHE TYR VAL ARG GLN ALA GLU ALA LEU SEQRES 10 A 302 GLY LEU GLY HIS ALA VAL LEU CYS ALA GLU LYS LEU VAL SEQRES 11 A 302 GLY ASP ASN PRO PHE ALA VAL ILE LEU ALA ASP ASP LEU SEQRES 12 A 302 LEU ASP GLY PRO THR PRO VAL LEU ARG GLN MET ILE ASP SEQRES 13 A 302 VAL PHE ASP HIS TYR HIS ALA SER VAL ILE GLY VAL GLU SEQRES 14 A 302 GLU ILE ALA PRO ALA ASP SER LYS SER TYR GLY VAL ILE SEQRES 15 A 302 ASP GLY LYS ARG TRP GLU ASP ASP LEU PHE LYS LEU SER SEQRES 16 A 302 GLY ILE VAL GLU LYS PRO GLU PRO ALA GLN ALA PRO SER SEQRES 17 A 302 ASN PHE GLY VAL VAL GLY ARG TYR VAL LEU LYS PRO LYS SEQRES 18 A 302 ILE PHE LYS HIS LEU ARG GLY LEU LYS PRO GLY ALA GLY SEQRES 19 A 302 GLY GLU LEU GLN LEU THR ASP ALA ILE GLN SER LEU LEU SEQRES 20 A 302 THR ASP GLU GLN VAL LEU ALA TYR ARG TYR ASP GLY THR SEQRES 21 A 302 ARG PHE ASP CYS GLY SER LYS LEU GLY TYR LEU LYS ALA SEQRES 22 A 302 THR VAL GLU PHE ALA LEU ARG HIS PRO GLU VAL ALA ALA SEQRES 23 A 302 ASP PHE GLU ARG TYR LEU LEU ALA ARG MET SER GLU GLN SEQRES 24 A 302 LEU VAL VAL HET UPG A 301 36 HET MG A 302 1 HET MG A 303 1 HET CL A 304 1 HET CL A 305 1 HET CL A 306 1 HET CL A 307 1 HET CL A 308 1 HET CL A 309 1 HETNAM UPG URIDINE-5'-DIPHOSPHATE-GLUCOSE HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETSYN UPG URIDINE-5'-MONOPHOSPHATE GLUCOPYRANOSYL-MONOPHOSPHATE HETSYN 2 UPG ESTER FORMUL 2 UPG C15 H24 N2 O17 P2 FORMUL 3 MG 2(MG 2+) FORMUL 5 CL 6(CL 1-) FORMUL 11 HOH *176(H2 O) HELIX 1 AA1 GLY A 15 LEU A 19 5 5 HELIX 2 AA2 PRO A 26 MET A 29 5 4 HELIX 3 AA3 LEU A 37 ALA A 48 1 12 HELIX 4 AA4 SER A 60 ASP A 69 1 10 HELIX 5 AA5 SER A 71 ARG A 81 1 11 HELIX 6 AA6 LYS A 83 SER A 92 1 10 HELIX 7 AA7 GLY A 110 ALA A 118 1 9 HELIX 8 AA8 ALA A 118 GLY A 123 1 6 HELIX 9 AA9 PRO A 141 HIS A 154 1 14 HELIX 10 AB1 ALA A 164 SER A 170 5 7 HELIX 11 AB2 GLU A 194 ALA A 198 5 5 HELIX 12 AB3 LYS A 213 GLY A 220 1 8 HELIX 13 AB4 GLY A 224 GLU A 228 5 5 HELIX 14 AB5 GLN A 230 THR A 240 1 11 HELIX 15 AB6 SER A 258 HIS A 273 1 16 HELIX 16 AB7 VAL A 276 SER A 289 1 14 SHEET 1 AA110 ASP A 99 ARG A 104 0 SHEET 2 AA110 GLU A 52 THR A 57 1 N MET A 53 O ASP A 99 SHEET 3 AA110 LYS A 6 VAL A 11 1 N PHE A 9 O ILE A 54 SHEET 4 AA110 PHE A 127 ILE A 130 1 O ALA A 128 N VAL A 8 SHEET 5 AA110 PHE A 202 LEU A 210 -1 O LEU A 210 N PHE A 127 SHEET 6 AA110 GLY A 172 GLU A 180 -1 N GLY A 172 O VAL A 204 SHEET 7 AA110 LEU A 183 GLU A 191 -1 O LEU A 183 N TRP A 179 SHEET 8 AA110 VAL A 244 ARG A 248 -1 O VAL A 244 N LEU A 186 SHEET 9 AA110 SER A 156 GLU A 162 1 N ILE A 158 O TYR A 247 SHEET 10 AA110 PHE A 202 LEU A 210 -1 O VAL A 209 N VAL A 157 SHEET 1 AA2 2 PRO A 31 VAL A 32 0 SHEET 2 AA2 2 LYS A 35 PRO A 36 -1 O LYS A 35 N VAL A 32 SHEET 1 AA3 2 ASP A 134 ASP A 137 0 SHEET 2 AA3 2 THR A 252 ASP A 255 -1 O PHE A 254 N LEU A 135 LINK OD1 ASP A 133 MG MG A 303 1555 1555 2.05 LINK O2A UPG A 301 MG MG A 302 1555 1555 1.98 LINK O1A UPG A 301 MG MG A 303 1555 1555 2.15 LINK O2B UPG A 301 MG MG A 303 1555 1555 2.17 LINK MG MG A 302 O HOH A 419 1555 1555 1.93 LINK MG MG A 302 O HOH A 427 1555 1555 2.19 LINK MG MG A 302 O HOH A 455 1555 1555 2.32 LINK MG MG A 302 O HOH A 488 1555 1555 2.16 LINK MG MG A 302 O HOH A 510 1555 1555 2.35 LINK MG MG A 303 O HOH A 418 1555 1555 2.19 LINK MG MG A 303 O HOH A 465 1555 1555 2.05 LINK MG MG A 303 O HOH A 506 1555 1555 2.19 CISPEP 1 LEU A 19 PRO A 20 0 6.64 SITE 1 AC1 34 PRO A 10 ALA A 12 GLY A 13 LYS A 27 SITE 2 AC1 34 GLU A 28 GLN A 105 ALA A 108 LEU A 109 SITE 3 AC1 34 GLY A 110 LEU A 111 ALA A 114 LEU A 131 SITE 4 AC1 34 ASP A 133 ASP A 134 TYR A 171 GLY A 172 SITE 5 AC1 34 GLU A 191 LYS A 192 VAL A 204 THR A 232 SITE 6 AC1 34 MG A 302 MG A 303 HOH A 418 HOH A 427 SITE 7 AC1 34 HOH A 436 HOH A 455 HOH A 465 HOH A 473 SITE 8 AC1 34 HOH A 479 HOH A 488 HOH A 494 HOH A 503 SITE 9 AC1 34 HOH A 506 HOH A 510 SITE 1 AC2 6 UPG A 301 HOH A 419 HOH A 427 HOH A 455 SITE 2 AC2 6 HOH A 488 HOH A 510 SITE 1 AC3 5 ASP A 133 UPG A 301 HOH A 418 HOH A 465 SITE 2 AC3 5 HOH A 506 SITE 1 AC4 4 ALA A 164 PRO A 165 ALA A 166 PRO A 195 SITE 1 AC5 2 PRO A 126 HOH A 575 SITE 1 AC6 6 LYS A 211 PRO A 212 LYS A 213 HOH A 401 SITE 2 AC6 6 HOH A 561 HOH A 575 SITE 1 AC7 3 PHE A 254 ASP A 255 HOH A 547 SITE 1 AC8 4 GLY A 13 GLY A 15 LYS A 27 HOH A 488 SITE 1 AC9 2 ARG A 17 LYS A 259 CRYST1 84.900 84.900 252.700 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011779 0.006800 0.000000 0.00000 SCALE2 0.000000 0.013601 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003957 0.00000