HEADER TRANSFERASE/TRANSFERASE INHIBITOR 10-FEB-16 5I3O TITLE CRYSTAL STRUCTURE OF BMP-2-INDUCIBLE KINASE IN COMPLEX WITH AN TITLE 2 INDAZOLE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: BMP-2-INDUCIBLE PROTEIN KINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BIKE; COMPND 5 EC: 2.7.11.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BMP2K, BIKE, HRIHFB2017; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS TRANSFERASE, PROTEIN KINASE DOMAIN, STRUCTURAL GENOMICS, STRUCTURAL KEYWDS 2 GENOMICS CONSORTIUM, SGC, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.M.COUNAGO,F.J.SORRELL,T.KROJER,P.SAVITSKY,J.M.ELKINS,A.AXTMAN, AUTHOR 2 D.DREWRY,C.WELLS,C.ZHANG,W.ZUERCHER,T.M.WILLSON,C.H.ARROWSMITH, AUTHOR 3 A.M.EDWARDS,C.BOUNTRA,P.ARRUDA,O.GILEADI,STRUCTURAL GENOMICS AUTHOR 4 CONSORTIUM (SGC) REVDAT 5 27-SEP-23 5I3O 1 REMARK REVDAT 4 01-JAN-20 5I3O 1 REMARK REVDAT 3 17-APR-19 5I3O 1 REMARK REVDAT 2 01-NOV-17 5I3O 1 REMARK REVDAT 1 09-MAR-16 5I3O 0 JRNL AUTH R.M.COUNAGO,F.J.SORRELL,T.KROJER,J.M.ELKINS,O.GILEADI, JRNL AUTH 2 T.M.WILLSON,C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,P.ARRUDA JRNL TITL CRYSTAL STRUCTURE OF BMP-2-INDUCIBLE KINASE IN COMPLEX WITH JRNL TITL 2 AN INDAZOLE INHIBITOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 31738 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1602 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.48 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.51 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2459 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE : 0.2680 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.42 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 141 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4757 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 283 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 57.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.77310 REMARK 3 B22 (A**2) : -2.77310 REMARK 3 B33 (A**2) : 5.54620 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.370 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.348 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.252 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.311 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.245 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4929 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6690 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2286 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 125 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 738 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4929 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 642 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5614 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.13 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.14 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.21 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|42 - 74} REMARK 3 ORIGIN FOR THE GROUP (A): 22.4574 -5.0982 30.3781 REMARK 3 T TENSOR REMARK 3 T11: -0.0332 T22: 0.1136 REMARK 3 T33: -0.1893 T12: 0.1153 REMARK 3 T13: 0.0622 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 4.4273 L22: 4.3475 REMARK 3 L33: 4.3380 L12: 1.4953 REMARK 3 L13: 1.9071 L23: 0.9368 REMARK 3 S TENSOR REMARK 3 S11: 0.0027 S12: -0.1533 S13: 0.0674 REMARK 3 S21: 0.1328 S22: 0.1448 S23: 0.4043 REMARK 3 S31: -0.1019 S32: -0.3129 S33: -0.1475 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|75 - 131} REMARK 3 ORIGIN FOR THE GROUP (A): 30.6950 -15.3895 29.3454 REMARK 3 T TENSOR REMARK 3 T11: -0.0349 T22: 0.0972 REMARK 3 T33: -0.1321 T12: 0.0198 REMARK 3 T13: 0.0011 T23: -0.0213 REMARK 3 L TENSOR REMARK 3 L11: 3.2573 L22: 2.3893 REMARK 3 L33: 2.6355 L12: 1.5290 REMARK 3 L13: -0.4073 L23: -0.1103 REMARK 3 S TENSOR REMARK 3 S11: 0.0925 S12: -0.2285 S13: -0.3615 REMARK 3 S21: 0.3759 S22: -0.0610 S23: -0.2463 REMARK 3 S31: 0.1691 S32: -0.1816 S33: -0.0315 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|132 - 151} REMARK 3 ORIGIN FOR THE GROUP (A): 24.4856 -2.8570 8.3148 REMARK 3 T TENSOR REMARK 3 T11: -0.0721 T22: 0.1378 REMARK 3 T33: -0.1054 T12: 0.0943 REMARK 3 T13: 0.0916 T23: 0.0211 REMARK 3 L TENSOR REMARK 3 L11: 0.0201 L22: 2.7778 REMARK 3 L33: 0.2944 L12: -0.6411 REMARK 3 L13: 1.7537 L23: 0.4445 REMARK 3 S TENSOR REMARK 3 S11: -0.0577 S12: 0.0737 S13: 0.3259 REMARK 3 S21: -0.0009 S22: 0.1247 S23: 0.0351 REMARK 3 S31: -0.0284 S32: -0.2229 S33: -0.0670 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {A|152 - 196} REMARK 3 ORIGIN FOR THE GROUP (A): 37.9431 -10.4524 12.0089 REMARK 3 T TENSOR REMARK 3 T11: -0.0494 T22: 0.0532 REMARK 3 T33: -0.1087 T12: 0.0440 REMARK 3 T13: 0.0288 T23: -0.0294 REMARK 3 L TENSOR REMARK 3 L11: 1.6358 L22: 3.2429 REMARK 3 L33: 2.6745 L12: 0.3644 REMARK 3 L13: 0.2442 L23: -1.4809 REMARK 3 S TENSOR REMARK 3 S11: -0.0881 S12: -0.1838 S13: -0.0869 REMARK 3 S21: 0.1056 S22: 0.0107 S23: -0.0795 REMARK 3 S31: -0.0077 S32: 0.1360 S33: 0.0774 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: {A|197 - 244} REMARK 3 ORIGIN FOR THE GROUP (A): 35.1816 -30.2408 12.9563 REMARK 3 T TENSOR REMARK 3 T11: 0.0301 T22: -0.0697 REMARK 3 T33: 0.0338 T12: 0.0407 REMARK 3 T13: 0.1008 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 2.5353 L22: 4.4637 REMARK 3 L33: 1.2155 L12: -0.9743 REMARK 3 L13: -0.3125 L23: -0.4188 REMARK 3 S TENSOR REMARK 3 S11: -0.0461 S12: -0.1737 S13: -0.5417 REMARK 3 S21: -0.2375 S22: -0.0725 S23: -0.4644 REMARK 3 S31: 0.4320 S32: -0.0845 S33: 0.1186 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: {A|245 - 307} REMARK 3 ORIGIN FOR THE GROUP (A): 34.8835 -18.3124 -1.7811 REMARK 3 T TENSOR REMARK 3 T11: -0.0149 T22: 0.0250 REMARK 3 T33: -0.1095 T12: -0.0107 REMARK 3 T13: 0.0977 T23: -0.0854 REMARK 3 L TENSOR REMARK 3 L11: 2.9998 L22: 2.1327 REMARK 3 L33: 1.0962 L12: 0.5306 REMARK 3 L13: -0.1795 L23: 0.5092 REMARK 3 S TENSOR REMARK 3 S11: -0.2121 S12: 0.5030 S13: -0.4621 REMARK 3 S21: -0.4963 S22: 0.1017 S23: 0.0536 REMARK 3 S31: 0.2698 S32: -0.0186 S33: 0.1104 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: {A|308 - 343} REMARK 3 ORIGIN FOR THE GROUP (A): 47.6270 -12.4512 -0.2123 REMARK 3 T TENSOR REMARK 3 T11: -0.1142 T22: 0.0476 REMARK 3 T33: -0.0234 T12: 0.0165 REMARK 3 T13: 0.0826 T23: -0.0572 REMARK 3 L TENSOR REMARK 3 L11: 3.4219 L22: 2.3074 REMARK 3 L33: 2.9520 L12: 0.2949 REMARK 3 L13: 1.7388 L23: -1.1809 REMARK 3 S TENSOR REMARK 3 S11: -0.1709 S12: 0.3106 S13: -0.2463 REMARK 3 S21: -0.0133 S22: -0.0571 S23: -0.4647 REMARK 3 S31: 0.0321 S32: 0.0702 S33: 0.2280 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: {B|42 - 74} REMARK 3 ORIGIN FOR THE GROUP (A): 11.9054 -27.4098 -0.2744 REMARK 3 T TENSOR REMARK 3 T11: 0.0401 T22: 0.0461 REMARK 3 T33: -0.1653 T12: -0.0724 REMARK 3 T13: 0.0961 T23: -0.0697 REMARK 3 L TENSOR REMARK 3 L11: 3.3618 L22: 4.9550 REMARK 3 L33: 0.1377 L12: 1.6789 REMARK 3 L13: -0.0589 L23: 2.2773 REMARK 3 S TENSOR REMARK 3 S11: 0.0030 S12: 0.2695 S13: 0.4098 REMARK 3 S21: -0.1710 S22: 0.2970 S23: -0.1278 REMARK 3 S31: -0.0221 S32: 0.2940 S33: -0.3000 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: {B|75 - 131} REMARK 3 ORIGIN FOR THE GROUP (A): 14.0726 -40.1178 0.8869 REMARK 3 T TENSOR REMARK 3 T11: -0.0360 T22: 0.0402 REMARK 3 T33: -0.1414 T12: 0.0458 REMARK 3 T13: 0.0453 T23: -0.1466 REMARK 3 L TENSOR REMARK 3 L11: 4.4268 L22: 2.8873 REMARK 3 L33: 4.6047 L12: 1.0052 REMARK 3 L13: -1.0466 L23: -0.6225 REMARK 3 S TENSOR REMARK 3 S11: -0.0874 S12: 0.2022 S13: -0.2507 REMARK 3 S21: -0.3103 S22: 0.2579 S23: -0.5037 REMARK 3 S31: 0.3258 S32: 0.5420 S33: -0.1705 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: {B|132 - 151} REMARK 3 ORIGIN FOR THE GROUP (A): 11.4208 -27.3218 22.7172 REMARK 3 T TENSOR REMARK 3 T11: -0.0435 T22: 0.0497 REMARK 3 T33: -0.0806 T12: -0.0601 REMARK 3 T13: 0.0578 T23: -0.0839 REMARK 3 L TENSOR REMARK 3 L11: 1.8400 L22: 0.0000 REMARK 3 L33: 0.0000 L12: -0.8748 REMARK 3 L13: 0.8035 L23: -2.6414 REMARK 3 S TENSOR REMARK 3 S11: -0.0040 S12: -0.0268 S13: 0.1907 REMARK 3 S21: -0.2598 S22: -0.0166 S23: -0.2723 REMARK 3 S31: -0.0357 S32: -0.0059 S33: 0.0206 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: {B|152 - 208} REMARK 3 ORIGIN FOR THE GROUP (A): 8.4912 -43.9539 17.6883 REMARK 3 T TENSOR REMARK 3 T11: 0.0785 T22: -0.0138 REMARK 3 T33: -0.1795 T12: 0.0337 REMARK 3 T13: -0.0084 T23: -0.0611 REMARK 3 L TENSOR REMARK 3 L11: 2.3859 L22: 2.4960 REMARK 3 L33: 3.0354 L12: -0.4798 REMARK 3 L13: -1.8188 L23: 1.2560 REMARK 3 S TENSOR REMARK 3 S11: -0.0683 S12: 0.2237 S13: -0.1864 REMARK 3 S21: -0.2309 S22: 0.0238 S23: -0.0431 REMARK 3 S31: 0.5417 S32: -0.0798 S33: 0.0445 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: {B|209 - 224} REMARK 3 ORIGIN FOR THE GROUP (A): 26.4176 -56.9796 13.6737 REMARK 3 T TENSOR REMARK 3 T11: 0.1618 T22: 0.0461 REMARK 3 T33: -0.1281 T12: 0.1520 REMARK 3 T13: 0.1036 T23: -0.1496 REMARK 3 L TENSOR REMARK 3 L11: 0.1814 L22: 0.3967 REMARK 3 L33: 1.3567 L12: -1.7973 REMARK 3 L13: -1.8840 L23: 1.7364 REMARK 3 S TENSOR REMARK 3 S11: 0.0129 S12: -0.0237 S13: -0.1025 REMARK 3 S21: -0.0165 S22: 0.0139 S23: -0.0327 REMARK 3 S31: 0.0580 S32: 0.0409 S33: -0.0268 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: {B|225 - 261} REMARK 3 ORIGIN FOR THE GROUP (A): 18.7170 -49.8799 24.7866 REMARK 3 T TENSOR REMARK 3 T11: 0.1005 T22: 0.0485 REMARK 3 T33: -0.1557 T12: 0.1520 REMARK 3 T13: -0.0069 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 2.3639 L22: 0.0000 REMARK 3 L33: 0.1103 L12: 0.9215 REMARK 3 L13: -0.4717 L23: -0.4156 REMARK 3 S TENSOR REMARK 3 S11: -0.0375 S12: -0.0853 S13: -0.3083 REMARK 3 S21: -0.1809 S22: 0.0220 S23: -0.2779 REMARK 3 S31: 0.3246 S32: 0.3043 S33: 0.0154 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: {B|262 - 343} REMARK 3 ORIGIN FOR THE GROUP (A): 10.1316 -48.0040 33.0721 REMARK 3 T TENSOR REMARK 3 T11: 0.0589 T22: -0.0419 REMARK 3 T33: -0.2495 T12: 0.0961 REMARK 3 T13: 0.0473 T23: -0.0131 REMARK 3 L TENSOR REMARK 3 L11: 4.2163 L22: 3.3842 REMARK 3 L33: 2.8033 L12: -0.0230 REMARK 3 L13: -0.1732 L23: 0.4120 REMARK 3 S TENSOR REMARK 3 S11: -0.1349 S12: -0.3029 S13: -0.5419 REMARK 3 S21: 0.3452 S22: 0.1185 S23: -0.2682 REMARK 3 S31: 0.5442 S32: 0.4407 S33: 0.0164 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5I3O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218065. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97626 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS MARCH 1, 2015 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.17 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31839 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 29.560 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.04780 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: 4W9W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES PH 6; 0.2M AMMONIUM CHLORIDE, REMARK 280 20% PEG 8000, 10% ETHYLENE GLYCOL, PH 6.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 127.69100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 39.12450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 39.12450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 191.53650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 39.12450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 39.12450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 63.84550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 39.12450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.12450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 191.53650 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 39.12450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 39.12450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 63.84550 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 127.69100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MONOMER ACCORDING TO GEL FILTRATION REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 121 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 62 -52.00 78.95 REMARK 500 SER A 120 80.03 -162.83 REMARK 500 ASP A 121 -102.26 61.35 REMARK 500 ASP A 180 54.37 -150.05 REMARK 500 ILE A 235 -63.25 -104.67 REMARK 500 THR A 244 -169.25 -115.85 REMARK 500 PHE B 62 42.57 -92.61 REMARK 500 ASP B 180 53.41 -149.39 REMARK 500 TYR B 238 53.01 -116.26 REMARK 500 THR B 244 -167.75 -106.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 661 DISTANCE = 6.97 ANGSTROMS REMARK 525 HOH B 619 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH B 620 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH B 621 DISTANCE = 13.92 ANGSTROMS REMARK 525 HOH B 622 DISTANCE = 15.01 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IDV A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IDV B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4W9W RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BMP-2-INDUCIBLE KINASE IN COMPLEX WITH SMALL REMARK 900 MOLECULE AZD-7762 REMARK 900 RELATED ID: 4W9X RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BMP-2-INDUCIBLE KINASE IN COMPLEX WITH REMARK 900 BARICITINIB REMARK 900 RELATED ID: 5I3R RELATED DB: PDB DBREF 5I3O A 42 343 UNP Q9NSY1 BMP2K_HUMAN 42 343 DBREF 5I3O B 42 343 UNP Q9NSY1 BMP2K_HUMAN 42 343 SEQADV 5I3O ALA A 320 UNP Q9NSY1 LYS 320 ENGINEERED MUTATION SEQADV 5I3O ALA A 321 UNP Q9NSY1 LYS 321 ENGINEERED MUTATION SEQADV 5I3O ALA B 320 UNP Q9NSY1 LYS 320 ENGINEERED MUTATION SEQADV 5I3O ALA B 321 UNP Q9NSY1 LYS 321 ENGINEERED MUTATION SEQRES 1 A 302 ARG VAL PHE ALA VAL GLY ARG HIS GLN VAL THR LEU GLU SEQRES 2 A 302 GLU SER LEU ALA GLU GLY GLY PHE SER THR VAL PHE LEU SEQRES 3 A 302 VAL ARG THR HIS GLY GLY ILE ARG CYS ALA LEU LYS ARG SEQRES 4 A 302 MET TYR VAL ASN ASN MET PRO ASP LEU ASN VAL CYS LYS SEQRES 5 A 302 ARG GLU ILE THR ILE MET LYS GLU LEU SER GLY HIS LYS SEQRES 6 A 302 ASN ILE VAL GLY TYR LEU ASP CYS ALA VAL ASN SER ILE SEQRES 7 A 302 SER ASP ASN VAL TRP GLU VAL LEU ILE LEU MET GLU TYR SEQRES 8 A 302 CYS ARG ALA GLY GLN VAL VAL ASN GLN MET ASN LYS LYS SEQRES 9 A 302 LEU GLN THR GLY PHE THR GLU PRO GLU VAL LEU GLN ILE SEQRES 10 A 302 PHE CYS ASP THR CYS GLU ALA VAL ALA ARG LEU HIS GLN SEQRES 11 A 302 CYS LYS THR PRO ILE ILE HIS ARG ASP LEU LYS VAL GLU SEQRES 12 A 302 ASN ILE LEU LEU ASN ASP GLY GLY ASN TYR VAL LEU CYS SEQRES 13 A 302 ASP PHE GLY SER ALA THR ASN LYS PHE LEU ASN PRO GLN SEQRES 14 A 302 LYS ASP GLY VAL ASN VAL VAL GLU GLU GLU ILE LYS LYS SEQRES 15 A 302 TYR THR THR LEU SER TYR ARG ALA PRO GLU MET ILE ASN SEQRES 16 A 302 LEU TYR GLY GLY LYS PRO ILE THR THR LYS ALA ASP ILE SEQRES 17 A 302 TRP ALA LEU GLY CYS LEU LEU TYR LYS LEU CYS PHE PHE SEQRES 18 A 302 THR LEU PRO PHE GLY GLU SER GLN VAL ALA ILE CYS ASP SEQRES 19 A 302 GLY ASN PHE THR ILE PRO ASP ASN SER ARG TYR SER ARG SEQRES 20 A 302 ASN ILE HIS CYS LEU ILE ARG PHE MET LEU GLU PRO ASP SEQRES 21 A 302 PRO GLU HIS ARG PRO ASP ILE PHE GLN VAL SER TYR PHE SEQRES 22 A 302 ALA PHE LYS PHE ALA ALA ALA ASP CYS PRO VAL SER ASN SEQRES 23 A 302 ILE ASN ASN SER SER ILE PRO SER ALA LEU PRO GLU PRO SEQRES 24 A 302 MET THR ALA SEQRES 1 B 302 ARG VAL PHE ALA VAL GLY ARG HIS GLN VAL THR LEU GLU SEQRES 2 B 302 GLU SER LEU ALA GLU GLY GLY PHE SER THR VAL PHE LEU SEQRES 3 B 302 VAL ARG THR HIS GLY GLY ILE ARG CYS ALA LEU LYS ARG SEQRES 4 B 302 MET TYR VAL ASN ASN MET PRO ASP LEU ASN VAL CYS LYS SEQRES 5 B 302 ARG GLU ILE THR ILE MET LYS GLU LEU SER GLY HIS LYS SEQRES 6 B 302 ASN ILE VAL GLY TYR LEU ASP CYS ALA VAL ASN SER ILE SEQRES 7 B 302 SER ASP ASN VAL TRP GLU VAL LEU ILE LEU MET GLU TYR SEQRES 8 B 302 CYS ARG ALA GLY GLN VAL VAL ASN GLN MET ASN LYS LYS SEQRES 9 B 302 LEU GLN THR GLY PHE THR GLU PRO GLU VAL LEU GLN ILE SEQRES 10 B 302 PHE CYS ASP THR CYS GLU ALA VAL ALA ARG LEU HIS GLN SEQRES 11 B 302 CYS LYS THR PRO ILE ILE HIS ARG ASP LEU LYS VAL GLU SEQRES 12 B 302 ASN ILE LEU LEU ASN ASP GLY GLY ASN TYR VAL LEU CYS SEQRES 13 B 302 ASP PHE GLY SER ALA THR ASN LYS PHE LEU ASN PRO GLN SEQRES 14 B 302 LYS ASP GLY VAL ASN VAL VAL GLU GLU GLU ILE LYS LYS SEQRES 15 B 302 TYR THR THR LEU SER TYR ARG ALA PRO GLU MET ILE ASN SEQRES 16 B 302 LEU TYR GLY GLY LYS PRO ILE THR THR LYS ALA ASP ILE SEQRES 17 B 302 TRP ALA LEU GLY CYS LEU LEU TYR LYS LEU CYS PHE PHE SEQRES 18 B 302 THR LEU PRO PHE GLY GLU SER GLN VAL ALA ILE CYS ASP SEQRES 19 B 302 GLY ASN PHE THR ILE PRO ASP ASN SER ARG TYR SER ARG SEQRES 20 B 302 ASN ILE HIS CYS LEU ILE ARG PHE MET LEU GLU PRO ASP SEQRES 21 B 302 PRO GLU HIS ARG PRO ASP ILE PHE GLN VAL SER TYR PHE SEQRES 22 B 302 ALA PHE LYS PHE ALA ALA ALA ASP CYS PRO VAL SER ASN SEQRES 23 B 302 ILE ASN ASN SER SER ILE PRO SER ALA LEU PRO GLU PRO SEQRES 24 B 302 MET THR ALA HET IDV A 401 28 HET SO4 A 402 5 HET SO4 A 403 5 HET IDV B 401 28 HETNAM IDV N-(6-{3-[(DIMETHYLSULFAMOYL)AMINO]PHENYL}-1H-INDAZOL-3- HETNAM 2 IDV YL)CYCLOPROPANECARBOXAMIDE HETNAM SO4 SULFATE ION FORMUL 3 IDV 2(C19 H21 N5 O3 S) FORMUL 4 SO4 2(O4 S 2-) FORMUL 7 HOH *283(H2 O) HELIX 1 AA1 ASN A 85 SER A 103 1 19 HELIX 2 AA2 GLN A 137 ASN A 143 1 7 HELIX 3 AA3 THR A 151 GLN A 171 1 21 HELIX 4 AA4 ASN A 208 GLY A 213 1 6 HELIX 5 AA5 GLY A 213 THR A 225 1 13 HELIX 6 AA6 THR A 226 ARG A 230 5 5 HELIX 7 AA7 ALA A 231 ILE A 235 5 5 HELIX 8 AA8 THR A 245 PHE A 262 1 18 HELIX 9 AA9 SER A 269 GLY A 276 1 8 HELIX 10 AB1 SER A 287 LEU A 298 1 12 HELIX 11 AB2 ASP A 307 ALA A 320 1 14 HELIX 12 AB3 ASN B 85 SER B 103 1 19 HELIX 13 AB4 GLN B 137 LYS B 145 1 9 HELIX 14 AB5 THR B 151 GLN B 171 1 21 HELIX 15 AB6 LYS B 182 GLU B 184 5 3 HELIX 16 AB7 ASN B 208 GLY B 213 1 6 HELIX 17 AB8 GLY B 213 THR B 225 1 13 HELIX 18 AB9 THR B 226 ARG B 230 5 5 HELIX 19 AC1 ALA B 231 ASN B 236 1 6 HELIX 20 AC2 THR B 245 PHE B 262 1 18 HELIX 21 AC3 SER B 269 GLY B 276 1 8 HELIX 22 AC4 SER B 287 LEU B 298 1 12 HELIX 23 AC5 ASP B 307 ALA B 320 1 14 SHEET 1 AA1 6 VAL A 43 VAL A 46 0 SHEET 2 AA1 6 HIS A 49 ALA A 58 -1 O HIS A 49 N VAL A 46 SHEET 3 AA1 6 SER A 63 THR A 70 -1 O LEU A 67 N GLU A 55 SHEET 4 AA1 6 ARG A 75 VAL A 83 -1 O ARG A 80 N THR A 64 SHEET 5 AA1 6 VAL A 123 GLU A 131 -1 O VAL A 126 N MET A 81 SHEET 6 AA1 6 TYR A 111 SER A 120 -1 N ALA A 115 O LEU A 127 SHEET 1 AA2 2 ILE A 186 LEU A 188 0 SHEET 2 AA2 2 TYR A 194 LEU A 196 -1 O VAL A 195 N LEU A 187 SHEET 1 AA3 2 THR A 279 ILE A 280 0 SHEET 2 AA3 2 MET A 341 THR A 342 1 O MET A 341 N ILE A 280 SHEET 1 AA4 6 VAL B 43 VAL B 46 0 SHEET 2 AA4 6 HIS B 49 GLU B 59 -1 O HIS B 49 N VAL B 46 SHEET 3 AA4 6 THR B 64 THR B 70 -1 O LEU B 67 N GLU B 55 SHEET 4 AA4 6 ARG B 75 VAL B 83 -1 O CYS B 76 N VAL B 68 SHEET 5 AA4 6 VAL B 123 GLU B 131 -1 O VAL B 126 N MET B 81 SHEET 6 AA4 6 TYR B 111 SER B 120 -1 N ASP B 113 O LEU B 129 SHEET 1 AA5 2 ILE B 186 LEU B 188 0 SHEET 2 AA5 2 TYR B 194 LEU B 196 -1 O VAL B 195 N LEU B 187 SHEET 1 AA6 2 THR B 279 ILE B 280 0 SHEET 2 AA6 2 MET B 341 THR B 342 1 O MET B 341 N ILE B 280 CISPEP 1 GLY A 61 PHE A 62 0 0.20 CISPEP 2 GLY B 61 PHE B 62 0 -5.35 SITE 1 AC1 17 LEU A 57 ALA A 58 GLY A 60 VAL A 65 SITE 2 AC1 17 ALA A 77 MET A 130 GLU A 131 TYR A 132 SITE 3 AC1 17 CYS A 133 ARG A 134 GLY A 136 GLN A 137 SITE 4 AC1 17 GLU A 184 ASN A 185 LEU A 187 CYS A 197 SITE 5 AC1 17 ASP A 198 SITE 1 AC2 5 HIS A 49 GLN A 50 THR A 70 ALA B 321 SITE 2 AC2 5 ASP B 322 SITE 1 AC3 5 ALA A 321 ASP A 322 ARG B 48 HIS B 49 SITE 2 AC3 5 GLN B 50 SITE 1 AC4 17 LEU B 57 ALA B 58 GLU B 59 VAL B 65 SITE 2 AC4 17 MET B 130 GLU B 131 TYR B 132 CYS B 133 SITE 3 AC4 17 ARG B 134 GLY B 136 GLN B 137 GLU B 184 SITE 4 AC4 17 ASN B 185 LEU B 187 CYS B 197 ASP B 198 SITE 5 AC4 17 HOH B 538 CRYST1 78.249 78.249 255.382 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012780 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012780 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003916 0.00000