HEADER TRANSFERASE/DNA 11-FEB-16 5I42 TITLE STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A DNA TITLE 2 APTAMER, AZTTP, AND CA(2+) ION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HIV-1 REVERSE TRANSCRIPTASE P66 SUBUNIT; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: PR160GAG-POL; COMPND 5 EC: 2.7.7.49; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HIV-1 REVERSE TRANSCRIPTASE P51 SUBUNIT; COMPND 9 CHAIN: B, D; COMPND 10 SYNONYM: PR160GAG-POL; COMPND 11 EC: 2.7.7.49; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DNA (38-MER); COMPND 15 CHAIN: E, F; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 GROUP M SOURCE 3 SUBTYPE B (ISOLATE BH10); SOURCE 4 ORGANISM_COMMON: HIV-1; SOURCE 5 ORGANISM_TAXID: 11678; SOURCE 6 STRAIN: ISOLATE BH10; SOURCE 7 GENE: GAG-POL; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 GROUP M SOURCE 12 SUBTYPE B (ISOLATE BH10); SOURCE 13 ORGANISM_COMMON: HIV-1; SOURCE 14 ORGANISM_TAXID: 11678; SOURCE 15 STRAIN: ISOLATE BH10; SOURCE 16 GENE: GAG-POL; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 MOL_ID: 3; SOURCE 20 SYNTHETIC: YES; SOURCE 21 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 22 ORGANISM_TAXID: 32630 KEYWDS RT, DNA APTAMER, AZTTP, POLYMERASE, P SITE COMPLEX, 2-O- KEYWDS 2 METHYLCYTIDINE, TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.DAS,E.ARNOLD REVDAT 6 27-SEP-23 5I42 1 LINK REVDAT 5 11-DEC-19 5I42 1 REMARK REVDAT 4 20-SEP-17 5I42 1 REMARK REVDAT 3 31-AUG-16 5I42 1 JRNL REVDAT 2 15-JUN-16 5I42 1 JRNL REVDAT 1 01-JUN-16 5I42 0 JRNL AUTH K.DAS,J.BALZARINI,M.T.MILLER,A.R.MAGUIRE,J.J.DESTEFANO, JRNL AUTH 2 E.ARNOLD JRNL TITL CONFORMATIONAL STATES OF HIV-1 REVERSE TRANSCRIPTASE FOR JRNL TITL 2 NUCLEOTIDE INCORPORATION VS PYROPHOSPHOROLYSIS-BINDING OF JRNL TITL 3 FOSCARNET. JRNL REF ACS CHEM.BIOL. V. 11 2158 2016 JRNL REFN ESSN 1554-8937 JRNL PMID 27192549 JRNL DOI 10.1021/ACSCHEMBIO.6B00187 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 46295 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1890 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.4538 - 7.9428 0.99 3411 155 0.1855 0.1963 REMARK 3 2 7.9428 - 6.3089 1.00 3367 146 0.2173 0.2237 REMARK 3 3 6.3089 - 5.5126 0.99 3326 154 0.2251 0.2838 REMARK 3 4 5.5126 - 5.0092 1.00 3340 144 0.2100 0.2255 REMARK 3 5 5.0092 - 4.6505 0.99 3353 143 0.2061 0.2233 REMARK 3 6 4.6505 - 4.3765 0.99 3322 132 0.2056 0.2423 REMARK 3 7 4.3765 - 4.1574 0.99 3329 134 0.2183 0.2456 REMARK 3 8 4.1574 - 3.9765 0.99 3321 146 0.2260 0.2741 REMARK 3 9 3.9765 - 3.8235 0.98 3270 144 0.2481 0.2735 REMARK 3 10 3.8235 - 3.6916 0.98 3262 155 0.2578 0.3140 REMARK 3 11 3.6916 - 3.5762 0.96 3191 122 0.2796 0.3348 REMARK 3 12 3.5762 - 3.4740 0.90 2999 126 0.2860 0.3298 REMARK 3 13 3.4740 - 3.3826 0.79 2670 101 0.3006 0.3677 REMARK 3 14 3.3826 - 3.3001 0.67 2244 88 0.3418 0.4085 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 105.2 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 17929 REMARK 3 ANGLE : 0.628 24648 REMARK 3 CHIRALITY : 0.044 2684 REMARK 3 PLANARITY : 0.005 2850 REMARK 3 DIHEDRAL : 15.595 10490 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5I42 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218154. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 - 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46338 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 64.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.33900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5D3G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7% PEG 8000, 25 MM BISTRIS-PROPANE PH REMARK 280 6.8, 75 MM BISTRIS-PROPANE PH 7.4, 50 MM AMMONIUM SULFATE, 5% REMARK 280 GLYCEROL, 5% SUCROSE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 66.09600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 555 REMARK 465 MET B -15 REMARK 465 ALA B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 ALA B -7 REMARK 465 LEU B -6 REMARK 465 GLU B -5 REMARK 465 VAL B -4 REMARK 465 LEU B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 GLY B 0 REMARK 465 PRO B 1 REMARK 465 ILE B 2 REMARK 465 SER B 3 REMARK 465 ASP B 218 REMARK 465 LYS B 219 REMARK 465 LYS B 220 REMARK 465 HIS B 221 REMARK 465 GLN B 222 REMARK 465 LYS B 223 REMARK 465 GLU B 224 REMARK 465 PRO B 225 REMARK 465 PRO B 226 REMARK 465 PHE B 227 REMARK 465 LEU B 228 REMARK 465 TRP B 229 REMARK 465 MET B 230 REMARK 465 GLY C 555 REMARK 465 MET D -15 REMARK 465 ALA D -14 REMARK 465 HIS D -13 REMARK 465 HIS D -12 REMARK 465 HIS D -11 REMARK 465 HIS D -10 REMARK 465 HIS D -9 REMARK 465 HIS D -8 REMARK 465 ALA D -7 REMARK 465 LEU D -6 REMARK 465 GLU D -5 REMARK 465 VAL D -4 REMARK 465 LEU D -3 REMARK 465 PHE D -2 REMARK 465 GLN D -1 REMARK 465 GLY D 0 REMARK 465 PRO D 1 REMARK 465 ILE D 2 REMARK 465 SER D 3 REMARK 465 ASP D 218 REMARK 465 LYS D 219 REMARK 465 LYS D 220 REMARK 465 HIS D 221 REMARK 465 GLN D 222 REMARK 465 LYS D 223 REMARK 465 GLU D 224 REMARK 465 PRO D 225 REMARK 465 PRO D 226 REMARK 465 PHE D 227 REMARK 465 LEU D 228 REMARK 465 TRP D 229 REMARK 465 MET D 230 REMARK 465 DT E -3 REMARK 465 DA E -2 REMARK 465 DA E -1 REMARK 465 DT F -3 REMARK 465 DA F -2 REMARK 465 DA F -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN B 145 OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC E 16 O4' DC E 16 C4' 0.068 REMARK 500 DC F 16 O4' DC F 16 C4' 0.155 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG E 12 O4' - C4' - C3' ANGL. DEV. = -2.8 DEGREES REMARK 500 DG E 12 C5' - C4' - O4' ANGL. DEV. = 11.9 DEGREES REMARK 500 DG E 13 C5' - C4' - O4' ANGL. DEV. = 8.0 DEGREES REMARK 500 DC E 16 C5' - C4' - O4' ANGL. DEV. = 7.6 DEGREES REMARK 500 DC E 21 C5' - C4' - O4' ANGL. DEV. = 9.5 DEGREES REMARK 500 DG F 12 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DC F 16 O4' - C4' - C3' ANGL. DEV. = -5.9 DEGREES REMARK 500 DC F 16 C5' - C4' - O4' ANGL. DEV. = 14.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 36 -70.85 -57.46 REMARK 500 PRO A 55 37.01 -96.30 REMARK 500 ASP A 113 74.97 53.28 REMARK 500 LEU A 120 -178.18 -68.68 REMARK 500 PRO A 133 -169.02 -76.97 REMARK 500 MET A 184 -121.84 58.57 REMARK 500 ILE A 270 -43.80 -140.92 REMARK 500 GLN A 343 -56.29 -120.26 REMARK 500 PRO A 412 -171.69 -65.65 REMARK 500 LYS A 451 19.40 56.30 REMARK 500 LYS A 465 148.73 -171.84 REMARK 500 THR B 69 -19.76 73.26 REMARK 500 GLU B 89 -60.84 -104.22 REMARK 500 GLN B 91 -76.24 -84.04 REMARK 500 MET B 184 -135.23 46.35 REMARK 500 PHE B 346 -2.32 67.73 REMARK 500 LYS B 350 149.65 -172.28 REMARK 500 THR B 362 -48.73 -137.69 REMARK 500 GLU C 36 -72.94 -56.90 REMARK 500 PRO C 55 54.70 -101.51 REMARK 500 PHE C 87 -169.23 -108.56 REMARK 500 ASP C 113 75.12 51.12 REMARK 500 LEU C 120 -178.12 -68.10 REMARK 500 MET C 184 -121.25 58.69 REMARK 500 ILE C 270 -44.03 -141.07 REMARK 500 PRO C 412 -174.49 -65.14 REMARK 500 LYS C 451 18.35 55.45 REMARK 500 LYS C 465 148.70 -172.55 REMARK 500 THR D 69 -12.99 73.95 REMARK 500 GLN D 91 -76.55 -83.28 REMARK 500 MET D 184 -135.46 45.61 REMARK 500 PHE D 346 -0.11 66.39 REMARK 500 ARG D 358 150.26 -48.96 REMARK 500 THR D 362 -48.51 -135.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 CALCIUM ION COORDINATION WAS RESTRICTED TO > 2.5 A PER AUTHORS' REMARK 600 REQUEST REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 110 OD2 REMARK 620 2 VAL A 111 O 61.4 REMARK 620 3 ASP A 185 OD2 78.1 90.4 REMARK 620 4 AZT A 602 O2B 153.4 92.3 99.5 REMARK 620 5 AZT A 602 O1A 104.7 152.5 62.6 97.3 REMARK 620 6 AZT A 602 O2G 81.3 83.5 158.9 100.9 119.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 110 OD2 REMARK 620 2 VAL C 111 O 67.4 REMARK 620 3 ASP C 185 OD2 88.8 90.7 REMARK 620 4 AZT C 602 O1A 104.6 166.9 78.4 REMARK 620 5 AZT C 602 O2B 159.9 96.5 104.1 93.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AZT A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AZT C 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5HP1 RELATED DB: PDB REMARK 900 RELATED ID: 5HRO RELATED DB: PDB REMARK 900 RELATED ID: 5D3G RELATED DB: PDB REMARK 900 RELATED ID: 5I3U RELATED DB: PDB DBREF 5I42 A 1 555 UNP P03366 POL_HV1B1 600 1154 DBREF 5I42 B 1 428 UNP P03366 POL_HV1B1 600 1027 DBREF 5I42 C 1 555 UNP P03366 POL_HV1B1 600 1154 DBREF 5I42 D 1 428 UNP P03366 POL_HV1B1 600 1027 DBREF 5I42 E -3 34 PDB 5I42 5I42 -3 34 DBREF 5I42 F -3 34 PDB 5I42 5I42 -3 34 SEQADV 5I42 SER A 280 UNP P03366 CYS 879 ENGINEERED MUTATION SEQADV 5I42 MET B -15 UNP P03366 INITIATING METHIONINE SEQADV 5I42 ALA B -14 UNP P03366 EXPRESSION TAG SEQADV 5I42 HIS B -13 UNP P03366 EXPRESSION TAG SEQADV 5I42 HIS B -12 UNP P03366 EXPRESSION TAG SEQADV 5I42 HIS B -11 UNP P03366 EXPRESSION TAG SEQADV 5I42 HIS B -10 UNP P03366 EXPRESSION TAG SEQADV 5I42 HIS B -9 UNP P03366 EXPRESSION TAG SEQADV 5I42 HIS B -8 UNP P03366 EXPRESSION TAG SEQADV 5I42 ALA B -7 UNP P03366 EXPRESSION TAG SEQADV 5I42 LEU B -6 UNP P03366 EXPRESSION TAG SEQADV 5I42 GLU B -5 UNP P03366 EXPRESSION TAG SEQADV 5I42 VAL B -4 UNP P03366 EXPRESSION TAG SEQADV 5I42 LEU B -3 UNP P03366 EXPRESSION TAG SEQADV 5I42 PHE B -2 UNP P03366 EXPRESSION TAG SEQADV 5I42 GLN B -1 UNP P03366 EXPRESSION TAG SEQADV 5I42 GLY B 0 UNP P03366 EXPRESSION TAG SEQADV 5I42 SER B 280 UNP P03366 CYS 879 ENGINEERED MUTATION SEQADV 5I42 SER C 280 UNP P03366 CYS 879 ENGINEERED MUTATION SEQADV 5I42 MET D -15 UNP P03366 INITIATING METHIONINE SEQADV 5I42 ALA D -14 UNP P03366 EXPRESSION TAG SEQADV 5I42 HIS D -13 UNP P03366 EXPRESSION TAG SEQADV 5I42 HIS D -12 UNP P03366 EXPRESSION TAG SEQADV 5I42 HIS D -11 UNP P03366 EXPRESSION TAG SEQADV 5I42 HIS D -10 UNP P03366 EXPRESSION TAG SEQADV 5I42 HIS D -9 UNP P03366 EXPRESSION TAG SEQADV 5I42 HIS D -8 UNP P03366 EXPRESSION TAG SEQADV 5I42 ALA D -7 UNP P03366 EXPRESSION TAG SEQADV 5I42 LEU D -6 UNP P03366 EXPRESSION TAG SEQADV 5I42 GLU D -5 UNP P03366 EXPRESSION TAG SEQADV 5I42 VAL D -4 UNP P03366 EXPRESSION TAG SEQADV 5I42 LEU D -3 UNP P03366 EXPRESSION TAG SEQADV 5I42 PHE D -2 UNP P03366 EXPRESSION TAG SEQADV 5I42 GLN D -1 UNP P03366 EXPRESSION TAG SEQADV 5I42 GLY D 0 UNP P03366 EXPRESSION TAG SEQADV 5I42 SER D 280 UNP P03366 CYS 879 ENGINEERED MUTATION SEQRES 1 A 555 PRO ILE SER PRO ILE GLU THR VAL PRO VAL LYS LEU LYS SEQRES 2 A 555 PRO GLY MET ASP GLY PRO LYS VAL LYS GLN TRP PRO LEU SEQRES 3 A 555 THR GLU GLU LYS ILE LYS ALA LEU VAL GLU ILE CYS THR SEQRES 4 A 555 GLU MET GLU LYS GLU GLY LYS ILE SER LYS ILE GLY PRO SEQRES 5 A 555 GLU ASN PRO TYR ASN THR PRO VAL PHE ALA ILE LYS LYS SEQRES 6 A 555 LYS ASP SER THR LYS TRP ARG LYS LEU VAL ASP PHE ARG SEQRES 7 A 555 GLU LEU ASN LYS ARG THR GLN ASP PHE TRP GLU VAL GLN SEQRES 8 A 555 LEU GLY ILE PRO HIS PRO ALA GLY LEU LYS LYS LYS LYS SEQRES 9 A 555 SER VAL THR VAL LEU ASP VAL GLY ASP ALA TYR PHE SER SEQRES 10 A 555 VAL PRO LEU ASP GLU ASP PHE ARG LYS TYR THR ALA PHE SEQRES 11 A 555 THR ILE PRO SER ILE ASN ASN GLU THR PRO GLY ILE ARG SEQRES 12 A 555 TYR GLN TYR ASN VAL LEU PRO GLN GLY TRP LYS GLY SER SEQRES 13 A 555 PRO ALA ILE PHE GLN SER SER MET THR LYS ILE LEU GLU SEQRES 14 A 555 PRO PHE LYS LYS GLN ASN PRO ASP ILE VAL ILE TYR GLN SEQRES 15 A 555 TYR MET ASP ASP LEU TYR VAL GLY SER ASP LEU GLU ILE SEQRES 16 A 555 GLY GLN HIS ARG THR LYS ILE GLU GLU LEU ARG GLN HIS SEQRES 17 A 555 LEU LEU ARG TRP GLY LEU THR THR PRO ASP LYS LYS HIS SEQRES 18 A 555 GLN LYS GLU PRO PRO PHE LEU TRP MET GLY TYR GLU LEU SEQRES 19 A 555 HIS PRO ASP LYS TRP THR VAL GLN PRO ILE VAL LEU PRO SEQRES 20 A 555 GLU LYS ASP SER TRP THR VAL ASN ASP ILE GLN LYS LEU SEQRES 21 A 555 VAL GLY LYS LEU ASN TRP ALA SER GLN ILE TYR PRO GLY SEQRES 22 A 555 ILE LYS VAL ARG GLN LEU SER LYS LEU LEU ARG GLY THR SEQRES 23 A 555 LYS ALA LEU THR GLU VAL ILE PRO LEU THR GLU GLU ALA SEQRES 24 A 555 GLU LEU GLU LEU ALA GLU ASN ARG GLU ILE LEU LYS GLU SEQRES 25 A 555 PRO VAL HIS GLY VAL TYR TYR ASP PRO SER LYS ASP LEU SEQRES 26 A 555 ILE ALA GLU ILE GLN LYS GLN GLY GLN GLY GLN TRP THR SEQRES 27 A 555 TYR GLN ILE TYR GLN GLU PRO PHE LYS ASN LEU LYS THR SEQRES 28 A 555 GLY LYS TYR ALA ARG MET ARG GLY ALA HIS THR ASN ASP SEQRES 29 A 555 VAL LYS GLN LEU THR GLU ALA VAL GLN LYS ILE THR THR SEQRES 30 A 555 GLU SER ILE VAL ILE TRP GLY LYS THR PRO LYS PHE LYS SEQRES 31 A 555 LEU PRO ILE GLN LYS GLU THR TRP GLU THR TRP TRP THR SEQRES 32 A 555 GLU TYR TRP GLN ALA THR TRP ILE PRO GLU TRP GLU PHE SEQRES 33 A 555 VAL ASN THR PRO PRO LEU VAL LYS LEU TRP TYR GLN LEU SEQRES 34 A 555 GLU LYS GLU PRO ILE VAL GLY ALA GLU THR PHE TYR VAL SEQRES 35 A 555 ASP GLY ALA ALA ASN ARG GLU THR LYS LEU GLY LYS ALA SEQRES 36 A 555 GLY TYR VAL THR ASN LYS GLY ARG GLN LYS VAL VAL PRO SEQRES 37 A 555 LEU THR ASN THR THR ASN GLN LYS THR GLU LEU GLN ALA SEQRES 38 A 555 ILE TYR LEU ALA LEU GLN ASP SER GLY LEU GLU VAL ASN SEQRES 39 A 555 ILE VAL THR ASP SER GLN TYR ALA LEU GLY ILE ILE GLN SEQRES 40 A 555 ALA GLN PRO ASP LYS SER GLU SER GLU LEU VAL ASN GLN SEQRES 41 A 555 ILE ILE GLU GLN LEU ILE LYS LYS GLU LYS VAL TYR LEU SEQRES 42 A 555 ALA TRP VAL PRO ALA HIS LYS GLY ILE GLY GLY ASN GLU SEQRES 43 A 555 GLN VAL ASP LYS LEU VAL SER ALA GLY SEQRES 1 B 444 MET ALA HIS HIS HIS HIS HIS HIS ALA LEU GLU VAL LEU SEQRES 2 B 444 PHE GLN GLY PRO ILE SER PRO ILE GLU THR VAL PRO VAL SEQRES 3 B 444 LYS LEU LYS PRO GLY MET ASP GLY PRO LYS VAL LYS GLN SEQRES 4 B 444 TRP PRO LEU THR GLU GLU LYS ILE LYS ALA LEU VAL GLU SEQRES 5 B 444 ILE CYS THR GLU MET GLU LYS GLU GLY LYS ILE SER LYS SEQRES 6 B 444 ILE GLY PRO GLU ASN PRO TYR ASN THR PRO VAL PHE ALA SEQRES 7 B 444 ILE LYS LYS LYS ASP SER THR LYS TRP ARG LYS LEU VAL SEQRES 8 B 444 ASP PHE ARG GLU LEU ASN LYS ARG THR GLN ASP PHE TRP SEQRES 9 B 444 GLU VAL GLN LEU GLY ILE PRO HIS PRO ALA GLY LEU LYS SEQRES 10 B 444 LYS LYS LYS SER VAL THR VAL LEU ASP VAL GLY ASP ALA SEQRES 11 B 444 TYR PHE SER VAL PRO LEU ASP GLU ASP PHE ARG LYS TYR SEQRES 12 B 444 THR ALA PHE THR ILE PRO SER ILE ASN ASN GLU THR PRO SEQRES 13 B 444 GLY ILE ARG TYR GLN TYR ASN VAL LEU PRO GLN GLY TRP SEQRES 14 B 444 LYS GLY SER PRO ALA ILE PHE GLN SER SER MET THR LYS SEQRES 15 B 444 ILE LEU GLU PRO PHE LYS LYS GLN ASN PRO ASP ILE VAL SEQRES 16 B 444 ILE TYR GLN TYR MET ASP ASP LEU TYR VAL GLY SER ASP SEQRES 17 B 444 LEU GLU ILE GLY GLN HIS ARG THR LYS ILE GLU GLU LEU SEQRES 18 B 444 ARG GLN HIS LEU LEU ARG TRP GLY LEU THR THR PRO ASP SEQRES 19 B 444 LYS LYS HIS GLN LYS GLU PRO PRO PHE LEU TRP MET GLY SEQRES 20 B 444 TYR GLU LEU HIS PRO ASP LYS TRP THR VAL GLN PRO ILE SEQRES 21 B 444 VAL LEU PRO GLU LYS ASP SER TRP THR VAL ASN ASP ILE SEQRES 22 B 444 GLN LYS LEU VAL GLY LYS LEU ASN TRP ALA SER GLN ILE SEQRES 23 B 444 TYR PRO GLY ILE LYS VAL ARG GLN LEU SER LYS LEU LEU SEQRES 24 B 444 ARG GLY THR LYS ALA LEU THR GLU VAL ILE PRO LEU THR SEQRES 25 B 444 GLU GLU ALA GLU LEU GLU LEU ALA GLU ASN ARG GLU ILE SEQRES 26 B 444 LEU LYS GLU PRO VAL HIS GLY VAL TYR TYR ASP PRO SER SEQRES 27 B 444 LYS ASP LEU ILE ALA GLU ILE GLN LYS GLN GLY GLN GLY SEQRES 28 B 444 GLN TRP THR TYR GLN ILE TYR GLN GLU PRO PHE LYS ASN SEQRES 29 B 444 LEU LYS THR GLY LYS TYR ALA ARG MET ARG GLY ALA HIS SEQRES 30 B 444 THR ASN ASP VAL LYS GLN LEU THR GLU ALA VAL GLN LYS SEQRES 31 B 444 ILE THR THR GLU SER ILE VAL ILE TRP GLY LYS THR PRO SEQRES 32 B 444 LYS PHE LYS LEU PRO ILE GLN LYS GLU THR TRP GLU THR SEQRES 33 B 444 TRP TRP THR GLU TYR TRP GLN ALA THR TRP ILE PRO GLU SEQRES 34 B 444 TRP GLU PHE VAL ASN THR PRO PRO LEU VAL LYS LEU TRP SEQRES 35 B 444 TYR GLN SEQRES 1 C 555 PRO ILE SER PRO ILE GLU THR VAL PRO VAL LYS LEU LYS SEQRES 2 C 555 PRO GLY MET ASP GLY PRO LYS VAL LYS GLN TRP PRO LEU SEQRES 3 C 555 THR GLU GLU LYS ILE LYS ALA LEU VAL GLU ILE CYS THR SEQRES 4 C 555 GLU MET GLU LYS GLU GLY LYS ILE SER LYS ILE GLY PRO SEQRES 5 C 555 GLU ASN PRO TYR ASN THR PRO VAL PHE ALA ILE LYS LYS SEQRES 6 C 555 LYS ASP SER THR LYS TRP ARG LYS LEU VAL ASP PHE ARG SEQRES 7 C 555 GLU LEU ASN LYS ARG THR GLN ASP PHE TRP GLU VAL GLN SEQRES 8 C 555 LEU GLY ILE PRO HIS PRO ALA GLY LEU LYS LYS LYS LYS SEQRES 9 C 555 SER VAL THR VAL LEU ASP VAL GLY ASP ALA TYR PHE SER SEQRES 10 C 555 VAL PRO LEU ASP GLU ASP PHE ARG LYS TYR THR ALA PHE SEQRES 11 C 555 THR ILE PRO SER ILE ASN ASN GLU THR PRO GLY ILE ARG SEQRES 12 C 555 TYR GLN TYR ASN VAL LEU PRO GLN GLY TRP LYS GLY SER SEQRES 13 C 555 PRO ALA ILE PHE GLN SER SER MET THR LYS ILE LEU GLU SEQRES 14 C 555 PRO PHE LYS LYS GLN ASN PRO ASP ILE VAL ILE TYR GLN SEQRES 15 C 555 TYR MET ASP ASP LEU TYR VAL GLY SER ASP LEU GLU ILE SEQRES 16 C 555 GLY GLN HIS ARG THR LYS ILE GLU GLU LEU ARG GLN HIS SEQRES 17 C 555 LEU LEU ARG TRP GLY LEU THR THR PRO ASP LYS LYS HIS SEQRES 18 C 555 GLN LYS GLU PRO PRO PHE LEU TRP MET GLY TYR GLU LEU SEQRES 19 C 555 HIS PRO ASP LYS TRP THR VAL GLN PRO ILE VAL LEU PRO SEQRES 20 C 555 GLU LYS ASP SER TRP THR VAL ASN ASP ILE GLN LYS LEU SEQRES 21 C 555 VAL GLY LYS LEU ASN TRP ALA SER GLN ILE TYR PRO GLY SEQRES 22 C 555 ILE LYS VAL ARG GLN LEU SER LYS LEU LEU ARG GLY THR SEQRES 23 C 555 LYS ALA LEU THR GLU VAL ILE PRO LEU THR GLU GLU ALA SEQRES 24 C 555 GLU LEU GLU LEU ALA GLU ASN ARG GLU ILE LEU LYS GLU SEQRES 25 C 555 PRO VAL HIS GLY VAL TYR TYR ASP PRO SER LYS ASP LEU SEQRES 26 C 555 ILE ALA GLU ILE GLN LYS GLN GLY GLN GLY GLN TRP THR SEQRES 27 C 555 TYR GLN ILE TYR GLN GLU PRO PHE LYS ASN LEU LYS THR SEQRES 28 C 555 GLY LYS TYR ALA ARG MET ARG GLY ALA HIS THR ASN ASP SEQRES 29 C 555 VAL LYS GLN LEU THR GLU ALA VAL GLN LYS ILE THR THR SEQRES 30 C 555 GLU SER ILE VAL ILE TRP GLY LYS THR PRO LYS PHE LYS SEQRES 31 C 555 LEU PRO ILE GLN LYS GLU THR TRP GLU THR TRP TRP THR SEQRES 32 C 555 GLU TYR TRP GLN ALA THR TRP ILE PRO GLU TRP GLU PHE SEQRES 33 C 555 VAL ASN THR PRO PRO LEU VAL LYS LEU TRP TYR GLN LEU SEQRES 34 C 555 GLU LYS GLU PRO ILE VAL GLY ALA GLU THR PHE TYR VAL SEQRES 35 C 555 ASP GLY ALA ALA ASN ARG GLU THR LYS LEU GLY LYS ALA SEQRES 36 C 555 GLY TYR VAL THR ASN LYS GLY ARG GLN LYS VAL VAL PRO SEQRES 37 C 555 LEU THR ASN THR THR ASN GLN LYS THR GLU LEU GLN ALA SEQRES 38 C 555 ILE TYR LEU ALA LEU GLN ASP SER GLY LEU GLU VAL ASN SEQRES 39 C 555 ILE VAL THR ASP SER GLN TYR ALA LEU GLY ILE ILE GLN SEQRES 40 C 555 ALA GLN PRO ASP LYS SER GLU SER GLU LEU VAL ASN GLN SEQRES 41 C 555 ILE ILE GLU GLN LEU ILE LYS LYS GLU LYS VAL TYR LEU SEQRES 42 C 555 ALA TRP VAL PRO ALA HIS LYS GLY ILE GLY GLY ASN GLU SEQRES 43 C 555 GLN VAL ASP LYS LEU VAL SER ALA GLY SEQRES 1 D 444 MET ALA HIS HIS HIS HIS HIS HIS ALA LEU GLU VAL LEU SEQRES 2 D 444 PHE GLN GLY PRO ILE SER PRO ILE GLU THR VAL PRO VAL SEQRES 3 D 444 LYS LEU LYS PRO GLY MET ASP GLY PRO LYS VAL LYS GLN SEQRES 4 D 444 TRP PRO LEU THR GLU GLU LYS ILE LYS ALA LEU VAL GLU SEQRES 5 D 444 ILE CYS THR GLU MET GLU LYS GLU GLY LYS ILE SER LYS SEQRES 6 D 444 ILE GLY PRO GLU ASN PRO TYR ASN THR PRO VAL PHE ALA SEQRES 7 D 444 ILE LYS LYS LYS ASP SER THR LYS TRP ARG LYS LEU VAL SEQRES 8 D 444 ASP PHE ARG GLU LEU ASN LYS ARG THR GLN ASP PHE TRP SEQRES 9 D 444 GLU VAL GLN LEU GLY ILE PRO HIS PRO ALA GLY LEU LYS SEQRES 10 D 444 LYS LYS LYS SER VAL THR VAL LEU ASP VAL GLY ASP ALA SEQRES 11 D 444 TYR PHE SER VAL PRO LEU ASP GLU ASP PHE ARG LYS TYR SEQRES 12 D 444 THR ALA PHE THR ILE PRO SER ILE ASN ASN GLU THR PRO SEQRES 13 D 444 GLY ILE ARG TYR GLN TYR ASN VAL LEU PRO GLN GLY TRP SEQRES 14 D 444 LYS GLY SER PRO ALA ILE PHE GLN SER SER MET THR LYS SEQRES 15 D 444 ILE LEU GLU PRO PHE LYS LYS GLN ASN PRO ASP ILE VAL SEQRES 16 D 444 ILE TYR GLN TYR MET ASP ASP LEU TYR VAL GLY SER ASP SEQRES 17 D 444 LEU GLU ILE GLY GLN HIS ARG THR LYS ILE GLU GLU LEU SEQRES 18 D 444 ARG GLN HIS LEU LEU ARG TRP GLY LEU THR THR PRO ASP SEQRES 19 D 444 LYS LYS HIS GLN LYS GLU PRO PRO PHE LEU TRP MET GLY SEQRES 20 D 444 TYR GLU LEU HIS PRO ASP LYS TRP THR VAL GLN PRO ILE SEQRES 21 D 444 VAL LEU PRO GLU LYS ASP SER TRP THR VAL ASN ASP ILE SEQRES 22 D 444 GLN LYS LEU VAL GLY LYS LEU ASN TRP ALA SER GLN ILE SEQRES 23 D 444 TYR PRO GLY ILE LYS VAL ARG GLN LEU SER LYS LEU LEU SEQRES 24 D 444 ARG GLY THR LYS ALA LEU THR GLU VAL ILE PRO LEU THR SEQRES 25 D 444 GLU GLU ALA GLU LEU GLU LEU ALA GLU ASN ARG GLU ILE SEQRES 26 D 444 LEU LYS GLU PRO VAL HIS GLY VAL TYR TYR ASP PRO SER SEQRES 27 D 444 LYS ASP LEU ILE ALA GLU ILE GLN LYS GLN GLY GLN GLY SEQRES 28 D 444 GLN TRP THR TYR GLN ILE TYR GLN GLU PRO PHE LYS ASN SEQRES 29 D 444 LEU LYS THR GLY LYS TYR ALA ARG MET ARG GLY ALA HIS SEQRES 30 D 444 THR ASN ASP VAL LYS GLN LEU THR GLU ALA VAL GLN LYS SEQRES 31 D 444 ILE THR THR GLU SER ILE VAL ILE TRP GLY LYS THR PRO SEQRES 32 D 444 LYS PHE LYS LEU PRO ILE GLN LYS GLU THR TRP GLU THR SEQRES 33 D 444 TRP TRP THR GLU TYR TRP GLN ALA THR TRP ILE PRO GLU SEQRES 34 D 444 TRP GLU PHE VAL ASN THR PRO PRO LEU VAL LYS LEU TRP SEQRES 35 D 444 TYR GLN SEQRES 1 E 38 DT DA DA DT DA DC OMC DC OMC DC DC DC DT SEQRES 2 E 38 DT DC DG DG DT DG DC DT DT DT DG DC DA SEQRES 3 E 38 DC DC DG DA DA DG DG DG DG DG DG DG SEQRES 1 F 38 DT DA DA DT DA DC OMC DC OMC DC DC DC DT SEQRES 2 F 38 DT DC DG DG DT DG DC DT DT DT DG DC DA SEQRES 3 F 38 DC DC DG DA DA DG DG DG DG DG DG DG HET OMC E 3 21 HET OMC E 5 21 HET OMC F 3 21 HET OMC F 5 21 HET CA A 601 1 HET AZT A 602 31 HET CA C 601 1 HET AZT C 602 31 HETNAM OMC O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE HETNAM CA CALCIUM ION HETNAM AZT 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-TRIPHOSPHATE FORMUL 5 OMC 4(C10 H16 N3 O8 P) FORMUL 7 CA 2(CA 2+) FORMUL 8 AZT 2(C10 H16 N5 O13 P3) HELIX 1 AA1 THR A 27 GLU A 44 1 18 HELIX 2 AA2 PHE A 77 THR A 84 1 8 HELIX 3 AA3 HIS A 96 LEU A 100 5 5 HELIX 4 AA4 ALA A 114 VAL A 118 5 5 HELIX 5 AA5 PHE A 124 ALA A 129 5 6 HELIX 6 AA6 GLY A 155 ASN A 175 1 21 HELIX 7 AA7 GLU A 194 TRP A 212 1 19 HELIX 8 AA8 THR A 253 SER A 268 1 16 HELIX 9 AA9 VAL A 276 LYS A 281 1 6 HELIX 10 AB1 THR A 296 GLU A 312 1 17 HELIX 11 AB2 ASN A 363 GLY A 384 1 22 HELIX 12 AB3 GLN A 394 TYR A 405 1 12 HELIX 13 AB4 THR A 473 ASP A 488 1 16 HELIX 14 AB5 SER A 499 ALA A 508 1 10 HELIX 15 AB6 SER A 515 LYS A 528 1 14 HELIX 16 AB7 GLY A 544 VAL A 552 1 9 HELIX 17 AB8 THR B 27 GLU B 44 1 18 HELIX 18 AB9 PHE B 77 THR B 84 1 8 HELIX 19 AC1 THR B 84 GLN B 91 1 8 HELIX 20 AC2 GLY B 99 LYS B 103 5 5 HELIX 21 AC3 GLY B 112 SER B 117 5 6 HELIX 22 AC4 ASP B 121 THR B 128 5 8 HELIX 23 AC5 SER B 134 GLU B 138 5 5 HELIX 24 AC6 LYS B 154 PHE B 160 1 7 HELIX 25 AC7 PHE B 160 ASN B 175 1 16 HELIX 26 AC8 GLU B 194 ARG B 211 1 18 HELIX 27 AC9 HIS B 235 TRP B 239 5 5 HELIX 28 AD1 VAL B 254 SER B 268 1 15 HELIX 29 AD2 VAL B 276 LEU B 282 1 7 HELIX 30 AD3 THR B 296 LEU B 310 1 15 HELIX 31 AD4 ASN B 363 GLY B 384 1 22 HELIX 32 AD5 GLN B 394 TRP B 402 1 9 HELIX 33 AD6 THR B 403 TRP B 406 5 4 HELIX 34 AD7 THR C 27 GLU C 44 1 18 HELIX 35 AD8 PHE C 77 ARG C 83 1 7 HELIX 36 AD9 HIS C 96 LEU C 100 5 5 HELIX 37 AE1 ALA C 114 VAL C 118 5 5 HELIX 38 AE2 PHE C 124 ALA C 129 5 6 HELIX 39 AE3 GLY C 155 ASN C 175 1 21 HELIX 40 AE4 GLU C 194 TRP C 212 1 19 HELIX 41 AE5 THR C 253 SER C 268 1 16 HELIX 42 AE6 VAL C 276 LYS C 281 1 6 HELIX 43 AE7 THR C 296 GLU C 312 1 17 HELIX 44 AE8 ASN C 363 TRP C 383 1 21 HELIX 45 AE9 GLN C 394 TYR C 405 1 12 HELIX 46 AF1 THR C 473 ASP C 488 1 16 HELIX 47 AF2 SER C 499 ALA C 508 1 10 HELIX 48 AF3 SER C 515 LYS C 528 1 14 HELIX 49 AF4 GLY C 544 VAL C 552 1 9 HELIX 50 AF5 THR D 27 GLU D 44 1 18 HELIX 51 AF6 PHE D 77 THR D 84 1 8 HELIX 52 AF7 THR D 84 GLN D 91 1 8 HELIX 53 AF8 GLY D 99 LYS D 103 5 5 HELIX 54 AF9 GLY D 112 SER D 117 5 6 HELIX 55 AG1 ASP D 121 THR D 128 5 8 HELIX 56 AG2 SER D 134 GLU D 138 5 5 HELIX 57 AG3 LYS D 154 ASN D 175 1 22 HELIX 58 AG4 GLU D 194 ARG D 211 1 18 HELIX 59 AG5 HIS D 235 TRP D 239 5 5 HELIX 60 AG6 THR D 253 SER D 268 1 16 HELIX 61 AG7 VAL D 276 LEU D 282 1 7 HELIX 62 AG8 THR D 296 LEU D 310 1 15 HELIX 63 AG9 ASN D 363 GLY D 384 1 22 HELIX 64 AH1 GLN D 394 TRP D 402 1 9 HELIX 65 AH2 THR D 403 TRP D 406 5 4 SHEET 1 AA1 3 ILE A 47 LYS A 49 0 SHEET 2 AA1 3 ARG A 143 TYR A 146 -1 O GLN A 145 N SER A 48 SHEET 3 AA1 3 PHE A 130 THR A 131 -1 N PHE A 130 O TYR A 144 SHEET 1 AA2 2 VAL A 60 LYS A 64 0 SHEET 2 AA2 2 TRP A 71 VAL A 75 -1 O ARG A 72 N ILE A 63 SHEET 1 AA3 3 SER A 105 LEU A 109 0 SHEET 2 AA3 3 ASP A 186 SER A 191 -1 O VAL A 189 N THR A 107 SHEET 3 AA3 3 VAL A 179 TYR A 183 -1 N TYR A 181 O TYR A 188 SHEET 1 AA4 3 PHE A 227 TRP A 229 0 SHEET 2 AA4 3 TYR A 232 LEU A 234 -1 O LEU A 234 N PHE A 227 SHEET 3 AA4 3 TRP A 239 VAL A 241 -1 O THR A 240 N GLU A 233 SHEET 1 AA5 5 ASN A 348 TYR A 354 0 SHEET 2 AA5 5 TRP A 337 TYR A 342 -1 N ILE A 341 O LEU A 349 SHEET 3 AA5 5 ILE A 326 LYS A 331 -1 N ILE A 326 O TYR A 342 SHEET 4 AA5 5 LYS A 388 LEU A 391 1 O LYS A 390 N ALA A 327 SHEET 5 AA5 5 TRP A 414 PHE A 416 1 O GLU A 415 N PHE A 389 SHEET 1 AA6 2 HIS A 361 THR A 362 0 SHEET 2 AA6 2 LYS A 512 SER A 513 -1 N LYS A 512 O THR A 362 SHEET 1 AA7 5 GLN A 464 LEU A 469 0 SHEET 2 AA7 5 GLY A 453 THR A 459 -1 N GLY A 453 O LEU A 469 SHEET 3 AA7 5 GLU A 438 ALA A 446 -1 N TYR A 441 O VAL A 458 SHEET 4 AA7 5 GLU A 492 THR A 497 1 O ASN A 494 N PHE A 440 SHEET 5 AA7 5 LYS A 530 TRP A 535 1 O TYR A 532 N ILE A 495 SHEET 1 AA8 3 ILE B 47 LYS B 49 0 SHEET 2 AA8 3 ILE B 142 TYR B 146 -1 O GLN B 145 N SER B 48 SHEET 3 AA8 3 PHE B 130 ILE B 132 -1 N ILE B 132 O ILE B 142 SHEET 1 AA9 2 VAL B 60 ILE B 63 0 SHEET 2 AA9 2 ARG B 72 VAL B 75 -1 O ARG B 72 N ILE B 63 SHEET 1 AB1 4 VAL B 179 TYR B 183 0 SHEET 2 AB1 4 ASP B 186 SER B 191 -1 O TYR B 188 N TYR B 181 SHEET 3 AB1 4 SER B 105 ASP B 110 -1 N THR B 107 O VAL B 189 SHEET 4 AB1 4 TYR B 232 LEU B 234 -1 O LEU B 234 N VAL B 106 SHEET 1 AB2 2 TRP B 252 THR B 253 0 SHEET 2 AB2 2 VAL B 292 ILE B 293 -1 O ILE B 293 N TRP B 252 SHEET 1 AB3 5 ASN B 348 TYR B 354 0 SHEET 2 AB3 5 GLN B 336 TYR B 342 -1 N ILE B 341 O LYS B 350 SHEET 3 AB3 5 ILE B 326 GLY B 333 -1 N ILE B 326 O TYR B 342 SHEET 4 AB3 5 LYS B 388 LEU B 391 1 O LYS B 390 N ALA B 327 SHEET 5 AB3 5 TRP B 414 PHE B 416 1 O GLU B 415 N LEU B 391 SHEET 1 AB4 3 ILE C 47 LYS C 49 0 SHEET 2 AB4 3 ARG C 143 TYR C 146 -1 O GLN C 145 N SER C 48 SHEET 3 AB4 3 PHE C 130 THR C 131 -1 N PHE C 130 O TYR C 144 SHEET 1 AB5 2 VAL C 60 LYS C 64 0 SHEET 2 AB5 2 TRP C 71 VAL C 75 -1 O ARG C 72 N ILE C 63 SHEET 1 AB6 3 SER C 105 LEU C 109 0 SHEET 2 AB6 3 ASP C 186 SER C 191 -1 O VAL C 189 N THR C 107 SHEET 3 AB6 3 VAL C 179 TYR C 183 -1 N TYR C 181 O TYR C 188 SHEET 1 AB7 3 PHE C 227 TRP C 229 0 SHEET 2 AB7 3 TYR C 232 LEU C 234 -1 O LEU C 234 N PHE C 227 SHEET 3 AB7 3 TRP C 239 VAL C 241 -1 O THR C 240 N GLU C 233 SHEET 1 AB8 5 ASN C 348 TYR C 354 0 SHEET 2 AB8 5 TRP C 337 TYR C 342 -1 N ILE C 341 O LYS C 350 SHEET 3 AB8 5 ILE C 326 LYS C 331 -1 N GLU C 328 O GLN C 340 SHEET 4 AB8 5 LYS C 388 LEU C 391 1 O LYS C 390 N ALA C 327 SHEET 5 AB8 5 TRP C 414 PHE C 416 1 O GLU C 415 N PHE C 389 SHEET 1 AB9 2 HIS C 361 THR C 362 0 SHEET 2 AB9 2 LYS C 512 SER C 513 -1 O LYS C 512 N THR C 362 SHEET 1 AC1 5 GLN C 464 LEU C 469 0 SHEET 2 AC1 5 GLY C 453 THR C 459 -1 N GLY C 453 O LEU C 469 SHEET 3 AC1 5 GLU C 438 ALA C 446 -1 N TYR C 441 O VAL C 458 SHEET 4 AC1 5 GLU C 492 THR C 497 1 O ASN C 494 N PHE C 440 SHEET 5 AC1 5 LYS C 530 TRP C 535 1 O TYR C 532 N ILE C 495 SHEET 1 AC2 3 ILE D 47 LYS D 49 0 SHEET 2 AC2 3 ILE D 142 TYR D 146 -1 O GLN D 145 N SER D 48 SHEET 3 AC2 3 PHE D 130 ILE D 132 -1 N ILE D 132 O ILE D 142 SHEET 1 AC3 2 VAL D 60 LYS D 64 0 SHEET 2 AC3 2 TRP D 71 VAL D 75 -1 O ARG D 72 N ILE D 63 SHEET 1 AC4 4 VAL D 179 TYR D 183 0 SHEET 2 AC4 4 ASP D 186 SER D 191 -1 O TYR D 188 N TYR D 181 SHEET 3 AC4 4 SER D 105 ASP D 110 -1 N THR D 107 O VAL D 189 SHEET 4 AC4 4 TYR D 232 LEU D 234 -1 O LEU D 234 N VAL D 106 SHEET 1 AC5 5 ASN D 348 ALA D 355 0 SHEET 2 AC5 5 GLN D 336 TYR D 342 -1 N TYR D 339 O GLY D 352 SHEET 3 AC5 5 ILE D 326 GLY D 333 -1 N GLN D 330 O THR D 338 SHEET 4 AC5 5 LYS D 388 LEU D 391 1 O LYS D 390 N ALA D 327 SHEET 5 AC5 5 TRP D 414 PHE D 416 1 O GLU D 415 N PHE D 389 LINK O3' DC E 2 P OMC E 3 1555 1555 1.61 LINK O3' OMC E 3 P DC E 4 1555 1555 1.61 LINK O3' DC E 4 P OMC E 5 1555 1555 1.61 LINK O3' OMC E 5 P DC E 6 1555 1555 1.61 LINK O3' DC F 2 P OMC F 3 1555 1555 1.61 LINK O3' OMC F 3 P DC F 4 1555 1555 1.61 LINK O3' DC F 4 P OMC F 5 1555 1555 1.61 LINK O3' OMC F 5 P DC F 6 1555 1555 1.61 LINK OD2 ASP A 110 CA CA A 601 1555 1555 2.42 LINK O VAL A 111 CA CA A 601 1555 1555 2.29 LINK OD2 ASP A 185 CA CA A 601 1555 1555 2.41 LINK CA CA A 601 O2B AZT A 602 1555 1555 2.24 LINK CA CA A 601 O1A AZT A 602 1555 1555 2.31 LINK CA CA A 601 O2G AZT A 602 1555 1555 2.25 LINK OD2 ASP C 110 CA CA C 601 1555 1555 2.34 LINK O VAL C 111 CA CA C 601 1555 1555 2.14 LINK OD2 ASP C 185 CA CA C 601 1555 1555 2.42 LINK CA CA C 601 O1A AZT C 602 1555 1555 2.27 LINK CA CA C 601 O2B AZT C 602 1555 1555 2.31 CISPEP 1 PRO A 225 PRO A 226 0 4.91 CISPEP 2 PRO A 420 PRO A 421 0 -1.35 CISPEP 3 PRO C 225 PRO C 226 0 6.53 CISPEP 4 PRO C 420 PRO C 421 0 -2.58 SITE 1 AC1 4 ASP A 110 VAL A 111 ASP A 185 AZT A 602 SITE 1 AC2 15 LYS A 65 ARG A 72 ASP A 110 VAL A 111 SITE 2 AC2 15 GLY A 112 ASP A 113 ALA A 114 TYR A 115 SITE 3 AC2 15 PHE A 116 GLN A 151 ASP A 185 LYS A 220 SITE 4 AC2 15 CA A 601 DA E 1 DG E 34 SITE 1 AC3 4 ASP C 110 VAL C 111 ASP C 185 AZT C 602 SITE 1 AC4 15 LYS C 65 ARG C 72 ASP C 110 VAL C 111 SITE 2 AC4 15 GLY C 112 ASP C 113 ALA C 114 TYR C 115 SITE 3 AC4 15 PHE C 116 GLN C 151 ASP C 185 CA C 601 SITE 4 AC4 15 DA F 1 DC F 2 DG F 34 CRYST1 90.151 132.192 139.658 90.00 97.15 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011093 0.000000 0.001391 0.00000 SCALE2 0.000000 0.007565 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007216 0.00000