HEADER TRANSPORT PROTEIN 16-FEB-16 5I6C TITLE THE STRUCTURE OF THE EUKARYOTIC PURINE/H+ SYMPORTER, UAPA, IN COMPLEX TITLE 2 WITH XANTHINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: URIC ACID-XANTHINE PERMEASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: UAPA TRANSPORTER; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS NIDULANS FGSC A4; SOURCE 3 ORGANISM_TAXID: 227321; SOURCE 4 GENE: UAPA, AN6932; SOURCE 5 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 6 EXPRESSION_SYSTEM_COMMON: BAKER'S YEAST; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4932 KEYWDS MEMBRANE PROTEIN EUKARYOTIC URIC ACID/XANTHINE H+ SYMPORTER, KEYWDS 2 TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.ALGUEL,S.AMILLIS,J.LEUNG,G.LAMBRINIDIS,S.CAPALDI,N.J.SCULL, AUTHOR 2 G.CRAVEN,S.IWATA,A.ARMSTRONG,E.MIKROS,G.DIALLINAS,A.D.CAMERON, AUTHOR 3 B.BYRNE REVDAT 4 13-NOV-24 5I6C 1 REMARK REVDAT 3 30-AUG-17 5I6C 1 REMARK REVDAT 2 04-MAY-16 5I6C 1 JRNL REVDAT 1 27-APR-16 5I6C 0 JRNL AUTH Y.ALGUEL,S.AMILLIS,J.LEUNG,G.LAMBRINIDIS,S.CAPALDI, JRNL AUTH 2 N.J.SCULL,G.CRAVEN,S.IWATA,A.ARMSTRONG,E.MIKROS,G.DIALLINAS, JRNL AUTH 3 A.D.CAMERON,B.BYRNE JRNL TITL STRUCTURE OF EUKARYOTIC PURINE/H(+) SYMPORTER UAPA SUGGESTS JRNL TITL 2 A ROLE FOR HOMODIMERIZATION IN TRANSPORT ACTIVITY. JRNL REF NAT COMMUN V. 7 11336 2016 JRNL REFN ESSN 2041-1723 JRNL PMID 27088252 JRNL DOI 10.1038/NCOMMS11336 REMARK 2 REMARK 2 RESOLUTION. 3.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 76.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 20574 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.298 REMARK 3 R VALUE (WORKING SET) : 0.296 REMARK 3 FREE R VALUE : 0.327 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.180 REMARK 3 FREE R VALUE TEST SET COUNT : 1065 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 76.8774 - 7.3981 0.94 2398 125 0.2501 0.2910 REMARK 3 2 7.3981 - 5.8727 0.98 2455 151 0.3252 0.2982 REMARK 3 3 5.8727 - 5.1306 0.98 2438 131 0.3247 0.3262 REMARK 3 4 5.1306 - 4.6615 0.98 2427 152 0.2815 0.3305 REMARK 3 5 4.6615 - 4.3275 0.98 2458 132 0.2820 0.3269 REMARK 3 6 4.3275 - 4.0723 0.98 2438 129 0.3233 0.3871 REMARK 3 7 4.0723 - 3.8684 0.98 2456 135 0.3790 0.4109 REMARK 3 8 3.8684 - 3.7000 0.98 2439 110 0.4029 0.4491 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.710 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 43.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 7292 REMARK 3 ANGLE : 1.103 9944 REMARK 3 CHIRALITY : 0.041 1226 REMARK 3 PLANARITY : 0.009 1222 REMARK 3 DIHEDRAL : 11.294 2509 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -62.3381 -15.6395 6.3839 REMARK 3 T TENSOR REMARK 3 T11: 1.5216 T22: 1.5620 REMARK 3 T33: 1.5078 T12: -0.0157 REMARK 3 T13: 0.0119 T23: 0.0333 REMARK 3 L TENSOR REMARK 3 L11: 3.4643 L22: 3.3391 REMARK 3 L33: 2.9008 L12: 0.0303 REMARK 3 L13: 0.6692 L23: -0.4215 REMARK 3 S TENSOR REMARK 3 S11: -0.1282 S12: 0.0594 S13: 0.7718 REMARK 3 S21: -0.2106 S22: 0.4987 S23: 0.2211 REMARK 3 S31: -0.3516 S32: -0.1290 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -36.5038 -42.4252 9.7886 REMARK 3 T TENSOR REMARK 3 T11: 1.4988 T22: 1.5807 REMARK 3 T33: 2.3112 T12: 0.0027 REMARK 3 T13: 0.1127 T23: 0.1719 REMARK 3 L TENSOR REMARK 3 L11: 4.7815 L22: 3.6212 REMARK 3 L33: 4.3070 L12: -1.3452 REMARK 3 L13: 1.3610 L23: 0.0971 REMARK 3 S TENSOR REMARK 3 S11: 0.1807 S12: -0.6005 S13: -1.3184 REMARK 3 S21: -0.1393 S22: 0.0002 S23: -1.0964 REMARK 3 S31: 0.1038 S32: 0.3669 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5I6C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218359. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.992 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20599 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.700 REMARK 200 RESOLUTION RANGE LOW (A) : 76.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.96500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG300, 0.1 MES PH 6.5, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 86.91500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 ASN A 3 REMARK 465 SER A 4 REMARK 465 ILE A 5 REMARK 465 HIS A 6 REMARK 465 SER A 7 REMARK 465 THR A 8 REMARK 465 ASP A 9 REMARK 465 GLY A 10 REMARK 465 PRO A 11 REMARK 465 ASP A 12 REMARK 465 SER A 13 REMARK 465 VAL A 14 REMARK 465 ILE A 15 REMARK 465 PRO A 16 REMARK 465 ASN A 17 REMARK 465 SER A 18 REMARK 465 ASN A 19 REMARK 465 PRO A 20 REMARK 465 LYS A 21 REMARK 465 LYS A 22 REMARK 465 THR A 23 REMARK 465 VAL A 24 REMARK 465 ARG A 25 REMARK 465 GLN A 26 REMARK 465 ARG A 27 REMARK 465 VAL A 28 REMARK 465 ARG A 29 REMARK 465 LEU A 30 REMARK 465 LEU A 31 REMARK 465 ALA A 32 REMARK 465 ARG A 33 REMARK 465 HIS A 34 REMARK 465 LEU A 35 REMARK 465 THR A 36 REMARK 465 THR A 37 REMARK 465 ARG A 38 REMARK 465 GLU A 39 REMARK 465 GLY A 40 REMARK 465 LEU A 41 REMARK 465 ILE A 42 REMARK 465 GLY A 43 REMARK 465 ASP A 44 REMARK 465 TYR A 45 REMARK 465 ASP A 46 REMARK 465 TYR A 47 REMARK 465 GLY A 48 REMARK 465 PHE A 49 REMARK 465 LEU A 50 REMARK 465 PHE A 51 REMARK 465 ARG A 52 REMARK 465 PRO A 53 REMARK 465 GLU A 54 REMARK 465 LEU A 55 REMARK 465 PRO A 56 REMARK 465 PHE A 57 REMARK 465 MET A 58 REMARK 465 LYS A 59 REMARK 465 LYS A 60 REMARK 465 ASP A 61 REMARK 465 PRO A 62 REMARK 465 ARG A 63 REMARK 465 ALA A 64 REMARK 465 PRO A 65 REMARK 465 VAL A 546 REMARK 465 GLU A 547 REMARK 465 GLU A 548 REMARK 465 ILE A 549 REMARK 465 GLY A 550 REMARK 465 ALA A 551 REMARK 465 VAL A 552 REMARK 465 THR A 553 REMARK 465 PRO A 554 REMARK 465 MET A 555 REMARK 465 PRO A 556 REMARK 465 VAL A 557 REMARK 465 SER A 558 REMARK 465 ALA A 559 REMARK 465 HIS A 560 REMARK 465 ASP A 561 REMARK 465 ASN A 562 REMARK 465 ARG A 563 REMARK 465 ASP A 564 REMARK 465 GLY A 565 REMARK 465 GLU A 566 REMARK 465 ALA A 567 REMARK 465 GLU A 568 REMARK 465 TYR A 569 REMARK 465 GLN A 570 REMARK 465 SER A 571 REMARK 465 LYS A 572 REMARK 465 GLN A 573 REMARK 465 ALA A 574 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 ASN B 3 REMARK 465 SER B 4 REMARK 465 ILE B 5 REMARK 465 HIS B 6 REMARK 465 SER B 7 REMARK 465 THR B 8 REMARK 465 ASP B 9 REMARK 465 GLY B 10 REMARK 465 PRO B 11 REMARK 465 ASP B 12 REMARK 465 SER B 13 REMARK 465 VAL B 14 REMARK 465 ILE B 15 REMARK 465 PRO B 16 REMARK 465 ASN B 17 REMARK 465 SER B 18 REMARK 465 ASN B 19 REMARK 465 PRO B 20 REMARK 465 LYS B 21 REMARK 465 LYS B 22 REMARK 465 THR B 23 REMARK 465 VAL B 24 REMARK 465 ARG B 25 REMARK 465 GLN B 26 REMARK 465 ARG B 27 REMARK 465 VAL B 28 REMARK 465 ARG B 29 REMARK 465 LEU B 30 REMARK 465 LEU B 31 REMARK 465 ALA B 32 REMARK 465 ARG B 33 REMARK 465 HIS B 34 REMARK 465 LEU B 35 REMARK 465 THR B 36 REMARK 465 THR B 37 REMARK 465 ARG B 38 REMARK 465 GLU B 39 REMARK 465 GLY B 40 REMARK 465 LEU B 41 REMARK 465 ILE B 42 REMARK 465 GLY B 43 REMARK 465 ASP B 44 REMARK 465 TYR B 45 REMARK 465 ASP B 46 REMARK 465 TYR B 47 REMARK 465 GLY B 48 REMARK 465 PHE B 49 REMARK 465 LEU B 50 REMARK 465 PHE B 51 REMARK 465 ARG B 52 REMARK 465 PRO B 53 REMARK 465 GLU B 54 REMARK 465 LEU B 55 REMARK 465 PRO B 56 REMARK 465 PHE B 57 REMARK 465 MET B 58 REMARK 465 LYS B 59 REMARK 465 LYS B 60 REMARK 465 ASP B 61 REMARK 465 PRO B 62 REMARK 465 ARG B 63 REMARK 465 ALA B 64 REMARK 465 PRO B 65 REMARK 465 ARG B 133 REMARK 465 PHE B 134 REMARK 465 HIS B 135 REMARK 465 ILE B 136 REMARK 465 TYR B 137 REMARK 465 LYS B 138 REMARK 465 THR B 139 REMARK 465 PRO B 140 REMARK 465 TYR B 141 REMARK 465 TYR B 142 REMARK 465 ILE B 143 REMARK 465 GLY B 144 REMARK 465 VAL B 546 REMARK 465 GLU B 547 REMARK 465 GLU B 548 REMARK 465 ILE B 549 REMARK 465 GLY B 550 REMARK 465 ALA B 551 REMARK 465 VAL B 552 REMARK 465 THR B 553 REMARK 465 PRO B 554 REMARK 465 MET B 555 REMARK 465 PRO B 556 REMARK 465 VAL B 557 REMARK 465 SER B 558 REMARK 465 ALA B 559 REMARK 465 HIS B 560 REMARK 465 ASP B 561 REMARK 465 ASN B 562 REMARK 465 ARG B 563 REMARK 465 ASP B 564 REMARK 465 GLY B 565 REMARK 465 GLU B 566 REMARK 465 ALA B 567 REMARK 465 GLU B 568 REMARK 465 TYR B 569 REMARK 465 GLN B 570 REMARK 465 SER B 571 REMARK 465 LYS B 572 REMARK 465 GLN B 573 REMARK 465 ALA B 574 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 277 OG SER A 281 2.17 REMARK 500 O LEU B 277 OG SER B 281 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 105 -41.09 -137.22 REMARK 500 THR A 139 -62.46 -141.18 REMARK 500 LEU A 148 99.14 -45.67 REMARK 500 SER A 149 79.43 -119.09 REMARK 500 SER A 170 -74.49 -86.12 REMARK 500 ALA A 179 97.29 -176.93 REMARK 500 PRO A 211 -75.47 -58.00 REMARK 500 ALA A 260 148.00 -171.80 REMARK 500 SER A 295 -0.30 59.46 REMARK 500 ALA A 325 46.57 -101.24 REMARK 500 PHE A 437 78.12 -67.65 REMARK 500 ALA A 438 35.09 -73.77 REMARK 500 PHE A 501 -37.84 -155.62 REMARK 500 ASN A 503 -85.19 -105.63 REMARK 500 LEU B 105 -39.70 -135.10 REMARK 500 LEU B 148 93.10 -43.55 REMARK 500 SER B 149 79.94 -115.73 REMARK 500 SER B 170 -72.48 -87.80 REMARK 500 ALA B 179 -34.24 65.98 REMARK 500 PRO B 211 -78.69 -52.14 REMARK 500 SER B 295 -0.56 61.78 REMARK 500 ALA B 325 44.39 -100.79 REMARK 500 PHE B 437 77.98 -67.77 REMARK 500 ALA B 438 35.54 -73.63 REMARK 500 PHE B 501 -37.65 -154.13 REMARK 500 ASN B 503 -85.85 -106.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 LMT A 1003 REMARK 610 LMT B 1003 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XAN A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LMT A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LMT A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XAN B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LMT B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LMT B 1003 DBREF 5I6C A 1 574 UNP Q07307 UAPA_EMENI 1 574 DBREF 5I6C B 1 574 UNP Q07307 UAPA_EMENI 1 574 SEQADV 5I6C VAL A 411 UNP Q07307 GLY 411 ENGINEERED MUTATION SEQADV 5I6C VAL B 411 UNP Q07307 GLY 411 ENGINEERED MUTATION SEQRES 1 A 574 MET ASP ASN SER ILE HIS SER THR ASP GLY PRO ASP SER SEQRES 2 A 574 VAL ILE PRO ASN SER ASN PRO LYS LYS THR VAL ARG GLN SEQRES 3 A 574 ARG VAL ARG LEU LEU ALA ARG HIS LEU THR THR ARG GLU SEQRES 4 A 574 GLY LEU ILE GLY ASP TYR ASP TYR GLY PHE LEU PHE ARG SEQRES 5 A 574 PRO GLU LEU PRO PHE MET LYS LYS ASP PRO ARG ALA PRO SEQRES 6 A 574 PRO PHE PHE GLY LEU ASN GLU LYS ILE PRO VAL LEU LEU SEQRES 7 A 574 ALA PHE ILE LEU GLY LEU GLN HIS ALA LEU ALA MET LEU SEQRES 8 A 574 ALA GLY VAL VAL THR PRO PRO LEU ILE ILE SER SER SER SEQRES 9 A 574 LEU SER LEU PRO SER ASP LEU GLN GLN TYR LEU VAL SER SEQRES 10 A 574 THR SER LEU ILE VAL CYS GLY LEU LEU SER MET VAL GLN SEQRES 11 A 574 ILE THR ARG PHE HIS ILE TYR LYS THR PRO TYR TYR ILE SEQRES 12 A 574 GLY SER GLY VAL LEU SER VAL MET GLY VAL SER PHE SER SEQRES 13 A 574 ILE ILE SER VAL ALA SER GLY ALA PHE ASN GLN MET TYR SEQRES 14 A 574 SER ASN GLY PHE CYS GLN LEU ASP GLU ALA GLY ASN ARG SEQRES 15 A 574 LEU PRO CYS PRO GLU ALA TYR GLY ALA LEU ILE GLY THR SEQRES 16 A 574 SER ALA CYS CYS ALA LEU VAL GLU ILE LEU LEU ALA PHE SEQRES 17 A 574 VAL PRO PRO LYS VAL ILE GLN LYS ILE PHE PRO PRO ILE SEQRES 18 A 574 VAL THR GLY PRO THR VAL MET LEU ILE GLY ILE SER LEU SEQRES 19 A 574 ILE GLY THR GLY PHE LYS ASP TRP ALA GLY GLY SER ALA SEQRES 20 A 574 CYS MET ASP ASP GLY MET LEU CYS PRO SER ALA THR ALA SEQRES 21 A 574 PRO ARG PRO LEU PRO TRP GLY SER PRO GLU PHE ILE GLY SEQRES 22 A 574 LEU GLY PHE LEU VAL PHE VAL SER ILE ILE LEU CYS GLU SEQRES 23 A 574 ARG PHE GLY ALA PRO ILE MET LYS SER CYS SER VAL VAL SEQRES 24 A 574 ILE GLY LEU LEU VAL GLY CYS ILE VAL ALA ALA ALA CYS SEQRES 25 A 574 GLY TYR PHE SER HIS ALA ASP ILE ASP ALA ALA PRO ALA SEQRES 26 A 574 ALA SER PHE ILE TRP VAL LYS THR PHE PRO LEU SER VAL SEQRES 27 A 574 TYR GLY PRO MET VAL LEU PRO ILE ILE ALA VAL PHE ILE SEQRES 28 A 574 ILE CYS ALA CYS GLU CYS ILE GLY ASP VAL THR ALA THR SEQRES 29 A 574 CYS ASP VAL SER ARG LEU GLU VAL ARG GLY GLY THR PHE SEQRES 30 A 574 GLU SER ARG ILE GLN GLY ALA VAL LEU ALA ASP GLY ILE SEQRES 31 A 574 ASN SER VAL VAL ALA ALA LEU ALA THR MET THR PRO MET SEQRES 32 A 574 THR THR PHE ALA GLN ASN ASN VAL VAL ILE ALA LEU THR SEQRES 33 A 574 ARG CYS ALA ASN ARG TRP ALA GLY TYR CYS CYS CYS LEU SEQRES 34 A 574 ILE LEU ILE VAL ALA GLY ILE PHE ALA LYS PHE ALA ALA SEQRES 35 A 574 ALA ILE VAL ALA ILE PRO ASN SER VAL MET GLY GLY MET SEQRES 36 A 574 LYS THR PHE LEU PHE ALA SER VAL VAL ILE SER GLY GLN SEQRES 37 A 574 ALA ILE VAL ALA LYS ALA PRO PHE THR ARG ARG ASN ARG SEQRES 38 A 574 PHE ILE LEU THR ALA SER MET ALA LEU GLY TYR GLY ALA SEQRES 39 A 574 THR LEU VAL PRO THR TRP PHE GLY ASN VAL PHE PRO GLN SEQRES 40 A 574 THR GLU ASN ARG ASP LEU GLU GLY PHE GLU ASN ALA ILE SEQRES 41 A 574 GLU LEU VAL LEU GLU THR GLY PHE ALA VAL THR ALA PHE SEQRES 42 A 574 VAL ALA MET LEU LEU ASN ALA ILE MET PRO ALA GLU VAL SEQRES 43 A 574 GLU GLU ILE GLY ALA VAL THR PRO MET PRO VAL SER ALA SEQRES 44 A 574 HIS ASP ASN ARG ASP GLY GLU ALA GLU TYR GLN SER LYS SEQRES 45 A 574 GLN ALA SEQRES 1 B 574 MET ASP ASN SER ILE HIS SER THR ASP GLY PRO ASP SER SEQRES 2 B 574 VAL ILE PRO ASN SER ASN PRO LYS LYS THR VAL ARG GLN SEQRES 3 B 574 ARG VAL ARG LEU LEU ALA ARG HIS LEU THR THR ARG GLU SEQRES 4 B 574 GLY LEU ILE GLY ASP TYR ASP TYR GLY PHE LEU PHE ARG SEQRES 5 B 574 PRO GLU LEU PRO PHE MET LYS LYS ASP PRO ARG ALA PRO SEQRES 6 B 574 PRO PHE PHE GLY LEU ASN GLU LYS ILE PRO VAL LEU LEU SEQRES 7 B 574 ALA PHE ILE LEU GLY LEU GLN HIS ALA LEU ALA MET LEU SEQRES 8 B 574 ALA GLY VAL VAL THR PRO PRO LEU ILE ILE SER SER SER SEQRES 9 B 574 LEU SER LEU PRO SER ASP LEU GLN GLN TYR LEU VAL SER SEQRES 10 B 574 THR SER LEU ILE VAL CYS GLY LEU LEU SER MET VAL GLN SEQRES 11 B 574 ILE THR ARG PHE HIS ILE TYR LYS THR PRO TYR TYR ILE SEQRES 12 B 574 GLY SER GLY VAL LEU SER VAL MET GLY VAL SER PHE SER SEQRES 13 B 574 ILE ILE SER VAL ALA SER GLY ALA PHE ASN GLN MET TYR SEQRES 14 B 574 SER ASN GLY PHE CYS GLN LEU ASP GLU ALA GLY ASN ARG SEQRES 15 B 574 LEU PRO CYS PRO GLU ALA TYR GLY ALA LEU ILE GLY THR SEQRES 16 B 574 SER ALA CYS CYS ALA LEU VAL GLU ILE LEU LEU ALA PHE SEQRES 17 B 574 VAL PRO PRO LYS VAL ILE GLN LYS ILE PHE PRO PRO ILE SEQRES 18 B 574 VAL THR GLY PRO THR VAL MET LEU ILE GLY ILE SER LEU SEQRES 19 B 574 ILE GLY THR GLY PHE LYS ASP TRP ALA GLY GLY SER ALA SEQRES 20 B 574 CYS MET ASP ASP GLY MET LEU CYS PRO SER ALA THR ALA SEQRES 21 B 574 PRO ARG PRO LEU PRO TRP GLY SER PRO GLU PHE ILE GLY SEQRES 22 B 574 LEU GLY PHE LEU VAL PHE VAL SER ILE ILE LEU CYS GLU SEQRES 23 B 574 ARG PHE GLY ALA PRO ILE MET LYS SER CYS SER VAL VAL SEQRES 24 B 574 ILE GLY LEU LEU VAL GLY CYS ILE VAL ALA ALA ALA CYS SEQRES 25 B 574 GLY TYR PHE SER HIS ALA ASP ILE ASP ALA ALA PRO ALA SEQRES 26 B 574 ALA SER PHE ILE TRP VAL LYS THR PHE PRO LEU SER VAL SEQRES 27 B 574 TYR GLY PRO MET VAL LEU PRO ILE ILE ALA VAL PHE ILE SEQRES 28 B 574 ILE CYS ALA CYS GLU CYS ILE GLY ASP VAL THR ALA THR SEQRES 29 B 574 CYS ASP VAL SER ARG LEU GLU VAL ARG GLY GLY THR PHE SEQRES 30 B 574 GLU SER ARG ILE GLN GLY ALA VAL LEU ALA ASP GLY ILE SEQRES 31 B 574 ASN SER VAL VAL ALA ALA LEU ALA THR MET THR PRO MET SEQRES 32 B 574 THR THR PHE ALA GLN ASN ASN VAL VAL ILE ALA LEU THR SEQRES 33 B 574 ARG CYS ALA ASN ARG TRP ALA GLY TYR CYS CYS CYS LEU SEQRES 34 B 574 ILE LEU ILE VAL ALA GLY ILE PHE ALA LYS PHE ALA ALA SEQRES 35 B 574 ALA ILE VAL ALA ILE PRO ASN SER VAL MET GLY GLY MET SEQRES 36 B 574 LYS THR PHE LEU PHE ALA SER VAL VAL ILE SER GLY GLN SEQRES 37 B 574 ALA ILE VAL ALA LYS ALA PRO PHE THR ARG ARG ASN ARG SEQRES 38 B 574 PHE ILE LEU THR ALA SER MET ALA LEU GLY TYR GLY ALA SEQRES 39 B 574 THR LEU VAL PRO THR TRP PHE GLY ASN VAL PHE PRO GLN SEQRES 40 B 574 THR GLU ASN ARG ASP LEU GLU GLY PHE GLU ASN ALA ILE SEQRES 41 B 574 GLU LEU VAL LEU GLU THR GLY PHE ALA VAL THR ALA PHE SEQRES 42 B 574 VAL ALA MET LEU LEU ASN ALA ILE MET PRO ALA GLU VAL SEQRES 43 B 574 GLU GLU ILE GLY ALA VAL THR PRO MET PRO VAL SER ALA SEQRES 44 B 574 HIS ASP ASN ARG ASP GLY GLU ALA GLU TYR GLN SER LYS SEQRES 45 B 574 GLN ALA HET XAN A1001 11 HET LMT A1002 35 HET LMT A1003 28 HET XAN B1001 11 HET LMT B1002 35 HET LMT B1003 28 HETNAM XAN XANTHINE HETNAM LMT DODECYL-BETA-D-MALTOSIDE FORMUL 3 XAN 2(C5 H4 N4 O2) FORMUL 4 LMT 4(C24 H46 O11) HELIX 1 AA1 PRO A 75 SER A 104 1 30 HELIX 2 AA2 PRO A 108 THR A 132 1 25 HELIX 3 AA3 PHE A 155 ASN A 171 1 17 HELIX 4 AA4 CYS A 185 LEU A 205 1 21 HELIX 5 AA5 PRO A 210 PHE A 218 1 9 HELIX 6 AA6 PRO A 219 GLY A 244 1 26 HELIX 7 AA7 SER A 268 PHE A 288 1 21 HELIX 8 AA8 CYS A 296 GLY A 313 1 18 HELIX 9 AA9 SER A 316 ALA A 322 1 7 HELIX 10 AB1 MET A 342 SER A 368 1 27 HELIX 11 AB2 GLY A 374 ALA A 398 1 25 HELIX 12 AB3 GLN A 408 ARG A 417 1 10 HELIX 13 AB4 ASN A 420 PHE A 437 1 18 HELIX 14 AB5 LYS A 439 ALA A 446 1 8 HELIX 15 AB6 PRO A 448 ALA A 472 1 25 HELIX 16 AB7 THR A 477 VAL A 497 1 21 HELIX 17 AB8 LEU A 513 THR A 526 1 14 HELIX 18 AB9 THR A 526 MET A 542 1 17 HELIX 19 AC1 PRO B 75 SER B 104 1 30 HELIX 20 AC2 PRO B 108 THR B 132 1 25 HELIX 21 AC3 PHE B 155 ASN B 171 1 17 HELIX 22 AC4 CYS B 185 LEU B 205 1 21 HELIX 23 AC5 PRO B 210 PHE B 218 1 9 HELIX 24 AC6 PRO B 219 GLY B 244 1 26 HELIX 25 AC7 SER B 268 PHE B 288 1 21 HELIX 26 AC8 CYS B 296 GLY B 313 1 18 HELIX 27 AC9 SER B 316 ALA B 322 1 7 HELIX 28 AD1 MET B 342 SER B 368 1 27 HELIX 29 AD2 GLY B 374 ALA B 398 1 25 HELIX 30 AD3 ALA B 407 ARG B 417 1 11 HELIX 31 AD4 ASN B 420 PHE B 437 1 18 HELIX 32 AD5 LYS B 439 ALA B 446 1 8 HELIX 33 AD6 PRO B 448 ALA B 472 1 25 HELIX 34 AD7 THR B 477 VAL B 497 1 21 HELIX 35 AD8 LEU B 513 THR B 526 1 14 HELIX 36 AD9 THR B 526 MET B 542 1 17 SHEET 1 AA1 2 MET A 151 VAL A 153 0 SHEET 2 AA1 2 MET A 403 THR A 405 -1 O THR A 404 N GLY A 152 SHEET 1 AA2 2 MET B 151 VAL B 153 0 SHEET 2 AA2 2 MET B 403 THR B 405 -1 O THR B 404 N GLY B 152 SSBOND 1 CYS A 174 CYS A 185 1555 1555 2.03 SSBOND 2 CYS B 174 CYS B 185 1555 1555 2.04 CISPEP 1 ILE A 143 GLY A 144 0 -2.42 CISPEP 2 GLY A 245 SER A 246 0 -0.88 CISPEP 3 GLY B 245 SER B 246 0 -0.66 SITE 1 AC1 10 GLY A 93 VAL A 153 SER A 154 PHE A 155 SITE 2 AC1 10 GLU A 356 THR A 404 PHE A 406 ALA A 407 SITE 3 AC1 10 GLN A 408 LMT A1003 SITE 1 AC2 11 THR A 223 VAL A 227 ALA A 348 ILE A 352 SITE 2 AC2 11 CYS A 355 ASP A 360 ALA A 363 ALA A 407 SITE 3 AC2 11 LYS A 473 ALA A 529 LMT A1003 SITE 1 AC3 11 ALA A 89 SER A 295 VAL A 298 GLU A 356 SITE 2 AC3 11 GLN A 408 LEU A 459 SER A 462 SER A 466 SITE 3 AC3 11 XAN A1001 LMT A1002 ARG B 478 SITE 1 AC4 9 VAL B 153 SER B 154 PHE B 155 GLU B 356 SITE 2 AC4 9 THR B 405 PHE B 406 ALA B 407 GLN B 408 SITE 3 AC4 9 LMT B1003 SITE 1 AC5 11 THR B 223 VAL B 227 ALA B 348 ILE B 352 SITE 2 AC5 11 CYS B 355 ALA B 407 SER B 466 ILE B 470 SITE 3 AC5 11 LYS B 473 ALA B 529 LMT B1003 SITE 1 AC6 11 ARG A 478 ALA B 89 SER B 295 VAL B 298 SITE 2 AC6 11 GLU B 356 GLN B 408 LEU B 459 SER B 462 SITE 3 AC6 11 SER B 466 XAN B1001 LMT B1002 CRYST1 75.090 173.830 82.390 90.00 111.11 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013317 0.000000 0.005141 0.00000 SCALE2 0.000000 0.005753 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013011 0.00000