HEADER OXIDOREDUCTASE 18-FEB-16 5I7S TITLE CRYSTAL STRUCTURE OF B. PSEUDOMALLEI FABI IN COMPLEX WITH NAD AND PT01 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH]; COMPND 3 CHAIN: A; COMPND 4 EC: 1.3.1.9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI; SOURCE 3 ORGANISM_TAXID: 28450; SOURCE 4 GENE: FABI, FABI_2, ACT79_25590, AM256_11615, AM257_11635, SOURCE 5 AMS56_08605, DP46_2957, DP49_6839, ERS012314_03793, ERS012372_03823, SOURCE 6 SY87_14645, TR70_1075, VU09_13745; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENOYL-ACP REDUCTASE, BURKHOLDERIA PSEUDOMALLEI, DIPHENYL ETHERS, KEYWDS 2 SLOW-BINDING INHIBITORS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.W.HIRSCHBECK,S.ELTSCHKNER,P.J.TONGE,C.KISKER REVDAT 5 10-JAN-24 5I7S 1 REMARK REVDAT 4 06-SEP-17 5I7S 1 REMARK REVDAT 3 19-APR-17 5I7S 1 JRNL REVDAT 2 08-MAR-17 5I7S 1 JRNL REVDAT 1 22-FEB-17 5I7S 0 JRNL AUTH C.NECKLES,S.ELTSCHKNER,J.E.CUMMINGS,M.HIRSCHBECK,F.DARYAEE, JRNL AUTH 2 G.R.BOMMINENI,Z.ZHANG,L.SPAGNUOLO,W.YU,S.DAVOODI, JRNL AUTH 3 R.A.SLAYDEN,C.KISKER,P.J.TONGE JRNL TITL RATIONALIZING THE BINDING KINETICS FOR THE INHIBITION OF THE JRNL TITL 2 BURKHOLDERIA PSEUDOMALLEI FABI1 ENOYL-ACP REDUCTASE. JRNL REF BIOCHEMISTRY V. 56 1865 2017 JRNL REFN ISSN 1520-4995 JRNL PMID 28225601 JRNL DOI 10.1021/ACS.BIOCHEM.6B01048 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 33812 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1708 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.2904 - 3.6499 1.00 2827 146 0.1473 0.1698 REMARK 3 2 3.6499 - 2.8977 1.00 2732 141 0.1374 0.1564 REMARK 3 3 2.8977 - 2.5316 1.00 2705 142 0.1481 0.1765 REMARK 3 4 2.5316 - 2.3002 1.00 2662 162 0.1417 0.1915 REMARK 3 5 2.3002 - 2.1354 1.00 2665 158 0.1339 0.1506 REMARK 3 6 2.1354 - 2.0095 1.00 2661 137 0.1378 0.1640 REMARK 3 7 2.0095 - 1.9089 1.00 2649 141 0.1475 0.1775 REMARK 3 8 1.9089 - 1.8258 0.99 2631 136 0.1572 0.1957 REMARK 3 9 1.8258 - 1.7555 0.99 2642 160 0.1712 0.1964 REMARK 3 10 1.7555 - 1.6949 1.00 2651 127 0.1910 0.2299 REMARK 3 11 1.6949 - 1.6419 0.99 2648 130 0.2065 0.2365 REMARK 3 12 1.6419 - 1.5950 0.99 2631 128 0.2308 0.2433 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2021 REMARK 3 ANGLE : 1.145 2745 REMARK 3 CHIRALITY : 0.076 315 REMARK 3 PLANARITY : 0.005 349 REMARK 3 DIHEDRAL : 13.580 719 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.3377 -5.1205 -19.5579 REMARK 3 T TENSOR REMARK 3 T11: 0.0672 T22: 0.1391 REMARK 3 T33: 0.0848 T12: -0.0615 REMARK 3 T13: -0.0414 T23: 0.0372 REMARK 3 L TENSOR REMARK 3 L11: 1.2958 L22: 0.4963 REMARK 3 L33: 0.6633 L12: -0.1039 REMARK 3 L13: -0.3819 L23: -0.1442 REMARK 3 S TENSOR REMARK 3 S11: 0.1576 S12: 0.1028 S13: -0.2758 REMARK 3 S21: -0.0820 S22: -0.0023 S23: 0.0704 REMARK 3 S31: 0.1417 S32: -0.3865 S33: 0.0302 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.5219 1.5041 -24.0336 REMARK 3 T TENSOR REMARK 3 T11: 0.0678 T22: 0.0687 REMARK 3 T33: 0.0304 T12: -0.0102 REMARK 3 T13: -0.0044 T23: 0.0302 REMARK 3 L TENSOR REMARK 3 L11: 1.5798 L22: 0.5870 REMARK 3 L33: 0.8878 L12: -0.3356 REMARK 3 L13: 0.3820 L23: -0.3630 REMARK 3 S TENSOR REMARK 3 S11: -0.0316 S12: 0.0857 S13: 0.0248 REMARK 3 S21: -0.1094 S22: 0.0517 S23: -0.0069 REMARK 3 S31: 0.0114 S32: -0.1410 S33: -0.0129 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 101 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.6060 -0.9952 -16.7819 REMARK 3 T TENSOR REMARK 3 T11: 0.0359 T22: 0.0173 REMARK 3 T33: 0.0341 T12: -0.0134 REMARK 3 T13: -0.0062 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 0.5429 L22: 0.4925 REMARK 3 L33: 0.5793 L12: -0.1868 REMARK 3 L13: 0.0152 L23: -0.0719 REMARK 3 S TENSOR REMARK 3 S11: 0.0062 S12: 0.0213 S13: -0.0378 REMARK 3 S21: -0.0326 S22: 0.0350 S23: 0.0295 REMARK 3 S31: 0.0229 S32: -0.0249 S33: -0.0362 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 179 THROUGH 202 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.7386 -6.0826 -12.1211 REMARK 3 T TENSOR REMARK 3 T11: 0.0589 T22: 0.0405 REMARK 3 T33: 0.0385 T12: 0.0056 REMARK 3 T13: -0.0130 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 0.7557 L22: 1.5623 REMARK 3 L33: 0.6687 L12: -0.2146 REMARK 3 L13: 0.1922 L23: -0.1528 REMARK 3 S TENSOR REMARK 3 S11: 0.0689 S12: 0.1408 S13: -0.1069 REMARK 3 S21: -0.1610 S22: -0.0284 S23: 0.0207 REMARK 3 S31: 0.0900 S32: -0.0532 S33: -0.0416 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 203 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.1333 -9.5383 -2.6195 REMARK 3 T TENSOR REMARK 3 T11: 0.0521 T22: 0.0284 REMARK 3 T33: 0.0410 T12: -0.0228 REMARK 3 T13: -0.0180 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 0.7078 L22: 0.4873 REMARK 3 L33: 0.7188 L12: 0.0221 REMARK 3 L13: 0.1832 L23: -0.1363 REMARK 3 S TENSOR REMARK 3 S11: 0.0352 S12: 0.1159 S13: -0.1875 REMARK 3 S21: 0.0186 S22: 0.0788 S23: 0.0667 REMARK 3 S31: 0.1201 S32: -0.0993 S33: -0.0421 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5I7S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218403. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-SEP-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33816 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.595 REMARK 200 RESOLUTION RANGE LOW (A) : 31.284 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.65500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3EK2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BISTRIS, PH 6.5, 30 % PEG 300, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.21500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.93000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 44.55500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.21500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.93000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.55500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.21500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.93000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.55500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.21500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.93000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 44.55500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -142.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 74.43000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 74.43000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 454 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 548 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 259 REMARK 465 GLY A 260 REMARK 465 LEU A 261 REMARK 465 GLU A 262 REMARK 465 GLU A 263 REMARK 465 LYS A 264 REMARK 465 LEU A 265 REMARK 465 ALA A 266 REMARK 465 ALA A 267 REMARK 465 ALA A 268 REMARK 465 LEU A 269 REMARK 465 GLU A 270 REMARK 465 HIS A 271 REMARK 465 HIS A 272 REMARK 465 HIS A 273 REMARK 465 HIS A 274 REMARK 465 HIS A 275 REMARK 465 HIS A 276 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 608 O HOH A 638 1.87 REMARK 500 O HOH A 654 O HOH A 688 1.88 REMARK 500 O HOH A 604 O HOH A 607 1.89 REMARK 500 O HOH A 737 O HOH A 739 1.90 REMARK 500 O HOH A 614 O HOH A 639 2.03 REMARK 500 O HOH A 404 O HOH A 676 2.08 REMARK 500 O HOH A 661 O HOH A 724 2.12 REMARK 500 O HOH A 576 O HOH A 622 2.15 REMARK 500 O HOH A 484 O HOH A 485 2.16 REMARK 500 O HOH A 661 O HOH A 663 2.17 REMARK 500 O HOH A 625 O HOH A 730 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 610 O HOH A 610 2555 1.35 REMARK 500 O HOH A 726 O HOH A 726 4555 1.89 REMARK 500 O HOH A 484 O HOH A 535 2655 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 63 106.46 -160.17 REMARK 500 ASN A 155 -23.39 75.86 REMARK 500 ASN A 157 -117.43 46.89 REMARK 500 ASP A 248 29.13 -150.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 734 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH A 735 DISTANCE = 8.32 ANGSTROMS REMARK 525 HOH A 736 DISTANCE = 10.47 ANGSTROMS REMARK 525 HOH A 737 DISTANCE = 11.99 ANGSTROMS REMARK 525 HOH A 738 DISTANCE = 12.37 ANGSTROMS REMARK 525 HOH A 739 DISTANCE = 13.79 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E9P A 302 DBREF1 5I7S A 1 263 UNP A0A069B9A4_BURPE DBREF2 5I7S A A0A069B9A4 1 263 SEQADV 5I7S LYS A 264 UNP A0A069B9A EXPRESSION TAG SEQADV 5I7S LEU A 265 UNP A0A069B9A EXPRESSION TAG SEQADV 5I7S ALA A 266 UNP A0A069B9A EXPRESSION TAG SEQADV 5I7S ALA A 267 UNP A0A069B9A EXPRESSION TAG SEQADV 5I7S ALA A 268 UNP A0A069B9A EXPRESSION TAG SEQADV 5I7S LEU A 269 UNP A0A069B9A EXPRESSION TAG SEQADV 5I7S GLU A 270 UNP A0A069B9A EXPRESSION TAG SEQADV 5I7S HIS A 271 UNP A0A069B9A EXPRESSION TAG SEQADV 5I7S HIS A 272 UNP A0A069B9A EXPRESSION TAG SEQADV 5I7S HIS A 273 UNP A0A069B9A EXPRESSION TAG SEQADV 5I7S HIS A 274 UNP A0A069B9A EXPRESSION TAG SEQADV 5I7S HIS A 275 UNP A0A069B9A EXPRESSION TAG SEQADV 5I7S HIS A 276 UNP A0A069B9A EXPRESSION TAG SEQRES 1 A 276 MET GLY PHE LEU ASP GLY LYS ARG ILE LEU LEU THR GLY SEQRES 2 A 276 LEU LEU SER ASN ARG SER ILE ALA TYR GLY ILE ALA LYS SEQRES 3 A 276 ALA CYS LYS ARG GLU GLY ALA GLU LEU ALA PHE THR TYR SEQRES 4 A 276 VAL GLY ASP ARG PHE LYS ASP ARG ILE THR GLU PHE ALA SEQRES 5 A 276 ALA GLU PHE GLY SER GLU LEU VAL PHE PRO CYS ASP VAL SEQRES 6 A 276 ALA ASP ASP ALA GLN ILE ASP ALA LEU PHE ALA SER LEU SEQRES 7 A 276 LYS THR HIS TRP ASP SER LEU ASP GLY LEU VAL HIS SER SEQRES 8 A 276 ILE GLY PHE ALA PRO ARG GLU ALA ILE ALA GLY ASP PHE SEQRES 9 A 276 LEU ASP GLY LEU THR ARG GLU ASN PHE ARG ILE ALA HIS SEQRES 10 A 276 ASP ILE SER ALA TYR SER PHE PRO ALA LEU ALA LYS ALA SEQRES 11 A 276 ALA LEU PRO MET LEU SER ASP ASP ALA SER LEU LEU THR SEQRES 12 A 276 LEU SER TYR LEU GLY ALA GLU ARG ALA ILE PRO ASN TYR SEQRES 13 A 276 ASN THR MET GLY LEU ALA LYS ALA ALA LEU GLU ALA SER SEQRES 14 A 276 VAL ARG TYR LEU ALA VAL SER LEU GLY ALA LYS GLY VAL SEQRES 15 A 276 ARG VAL ASN ALA ILE SER ALA GLY PRO ILE LYS THR LEU SEQRES 16 A 276 ALA ALA SER GLY ILE LYS SER PHE GLY LYS ILE LEU ASP SEQRES 17 A 276 PHE VAL GLU SER ASN SER PRO LEU LYS ARG ASN VAL THR SEQRES 18 A 276 ILE GLU GLN VAL GLY ASN ALA GLY ALA PHE LEU LEU SER SEQRES 19 A 276 ASP LEU ALA SER GLY VAL THR ALA GLU VAL MET HIS VAL SEQRES 20 A 276 ASP SER GLY PHE ASN ALA VAL VAL GLY GLY MET ALA GLY SEQRES 21 A 276 LEU GLU GLU LYS LEU ALA ALA ALA LEU GLU HIS HIS HIS SEQRES 22 A 276 HIS HIS HIS HET NAD A 301 44 HET E9P A 302 16 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM E9P 5-ETHYL-2-PHENOXYPHENOL FORMUL 2 NAD C21 H27 N7 O14 P2 FORMUL 3 E9P C14 H14 O2 FORMUL 4 HOH *339(H2 O) HELIX 1 AA1 SER A 19 GLU A 31 1 13 HELIX 2 AA2 GLY A 41 ARG A 43 5 3 HELIX 3 AA3 PHE A 44 PHE A 55 1 12 HELIX 4 AA4 ASP A 67 THR A 80 1 14 HELIX 5 AA5 PRO A 96 ALA A 101 5 6 HELIX 6 AA6 THR A 109 ALA A 121 1 13 HELIX 7 AA7 TYR A 122 LEU A 132 1 11 HELIX 8 AA8 TYR A 146 GLU A 150 5 5 HELIX 9 AA9 ASN A 157 ALA A 179 1 23 HELIX 10 AB1 ALA A 196 ILE A 200 5 5 HELIX 11 AB2 SER A 202 SER A 214 1 13 HELIX 12 AB3 THR A 221 SER A 234 1 14 HELIX 13 AB4 ASP A 235 SER A 238 5 4 HELIX 14 AB5 GLY A 250 VAL A 254 5 5 SHEET 1 AA1 7 VAL A 60 PRO A 62 0 SHEET 2 AA1 7 GLU A 34 TYR A 39 1 N PHE A 37 O PHE A 61 SHEET 3 AA1 7 ARG A 8 LEU A 11 1 N LEU A 11 O ALA A 36 SHEET 4 AA1 7 LEU A 85 HIS A 90 1 O VAL A 89 N LEU A 10 SHEET 5 AA1 7 LEU A 135 SER A 145 1 O LEU A 142 N HIS A 90 SHEET 6 AA1 7 ARG A 183 ALA A 189 1 O ARG A 183 N LEU A 141 SHEET 7 AA1 7 VAL A 244 VAL A 247 1 O MET A 245 N ALA A 186 SITE 1 AC1 29 GLY A 13 LEU A 15 SER A 19 ILE A 20 SITE 2 AC1 29 VAL A 40 CYS A 63 ASP A 64 VAL A 65 SITE 3 AC1 29 SER A 91 ILE A 92 GLY A 93 LEU A 144 SITE 4 AC1 29 SER A 145 TYR A 146 LYS A 163 ALA A 189 SITE 5 AC1 29 GLY A 190 PRO A 191 ILE A 192 THR A 194 SITE 6 AC1 29 ALA A 196 E9P A 302 HOH A 464 HOH A 479 SITE 7 AC1 29 HOH A 486 HOH A 490 HOH A 531 HOH A 543 SITE 8 AC1 29 HOH A 565 SITE 1 AC2 10 GLY A 93 PHE A 94 TYR A 146 TYR A 156 SITE 2 AC2 10 MET A 159 LYS A 163 ALA A 196 ALA A 197 SITE 3 AC2 10 ILE A 200 NAD A 301 CRYST1 74.430 75.860 89.110 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013435 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013182 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011222 0.00000