HEADER CELL ADHESION 18-FEB-16 5I8D TITLE CRYSTAL STRUCTURE OF MOUSE CADHERIN-23 EC19-21 S2064P COMPND MOL_ID: 1; COMPND 2 MOLECULE: CADHERIN-23; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: OTOCADHERIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: CDH23; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-21 A KEYWDS HEARING, MECHANOTRANSDUCTION, ADHESION, CALCIUM-BINDING PROTEIN, CELL KEYWDS 2 ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR A.JAIGANESH,M.SOTOMAYOR REVDAT 5 27-SEP-23 5I8D 1 LINK REVDAT 4 18-DEC-19 5I8D 1 REMARK REVDAT 3 01-AUG-18 5I8D 1 JRNL REVDAT 2 20-SEP-17 5I8D 1 REMARK REVDAT 1 23-AUG-17 5I8D 0 JRNL AUTH A.JAIGANESH,P.DE-LA-TORRE,A.A.PATEL,D.J.TERMINE, JRNL AUTH 2 F.VELEZ-CORTES,C.CHEN,M.SOTOMAYOR JRNL TITL ZOOMING IN ON CADHERIN-23: STRUCTURAL DIVERSITY AND JRNL TITL 2 POTENTIAL MECHANISMS OF INHERITED DEAFNESS. JRNL REF STRUCTURE 2018 JRNL REFN ISSN 1878-4186 JRNL PMID 30033219 JRNL DOI 10.1016/J.STR.2018.06.003 REMARK 2 REMARK 2 RESOLUTION. 2.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 111.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 15017 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 809 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.69 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.76 REMARK 3 REFLECTION IN BIN (WORKING SET) : 886 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.10 REMARK 3 BIN R VALUE (WORKING SET) : 0.4100 REMARK 3 BIN FREE R VALUE SET COUNT : 48 REMARK 3 BIN FREE R VALUE : 0.4560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2562 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 9 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 63.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.71000 REMARK 3 B22 (A**2) : 9.01000 REMARK 3 B33 (A**2) : -10.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.68000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.447 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.289 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.309 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 36.516 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2610 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2470 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3584 ; 1.446 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5692 ; 0.958 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 334 ; 6.876 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 118 ;43.722 ;25.932 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 404 ;15.351 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;10.781 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 445 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2971 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 530 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1339 ; 0.894 ; 3.785 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1338 ; 0.895 ; 3.786 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1672 ; 1.493 ; 5.678 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1673 ; 1.493 ; 5.678 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1271 ; 0.799 ; 3.883 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1272 ; 0.798 ; 3.883 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1913 ; 1.386 ; 5.789 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2718 ; 2.722 ;29.829 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2717 ; 2.676 ;29.822 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1929 A 2040 REMARK 3 RESIDUE RANGE : A 2264 A 2266 REMARK 3 ORIGIN FOR THE GROUP (A): 52.8970 -10.8280 203.6050 REMARK 3 T TENSOR REMARK 3 T11: 0.0343 T22: 0.4257 REMARK 3 T33: 0.4996 T12: -0.0582 REMARK 3 T13: -0.0645 T23: -0.0602 REMARK 3 L TENSOR REMARK 3 L11: 0.3091 L22: 2.7053 REMARK 3 L33: 11.5047 L12: 0.5061 REMARK 3 L13: 0.0764 L23: 1.6496 REMARK 3 S TENSOR REMARK 3 S11: -0.0129 S12: 0.0472 S13: -0.0513 REMARK 3 S21: -0.1436 S22: -0.1887 S23: -0.0540 REMARK 3 S31: -0.1982 S32: -0.1667 S33: 0.2017 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2041 A 2145 REMARK 3 RESIDUE RANGE : A 2267 A 2269 REMARK 3 ORIGIN FOR THE GROUP (A): 63.2930 -27.7010 160.0120 REMARK 3 T TENSOR REMARK 3 T11: 0.2677 T22: 0.3598 REMARK 3 T33: 0.4886 T12: 0.0329 REMARK 3 T13: -0.1002 T23: -0.0184 REMARK 3 L TENSOR REMARK 3 L11: 1.3823 L22: 0.5520 REMARK 3 L33: 10.6648 L12: -0.5800 REMARK 3 L13: -3.7882 L23: 1.8009 REMARK 3 S TENSOR REMARK 3 S11: 0.0412 S12: -0.2177 S13: 0.0043 REMARK 3 S21: 0.1658 S22: 0.0243 S23: 0.0288 REMARK 3 S31: 0.1736 S32: 0.5933 S33: -0.0656 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2146 A 2263 REMARK 3 RESIDUE RANGE : A 2270 A 2270 REMARK 3 ORIGIN FOR THE GROUP (A): 69.9430 -39.5260 112.6710 REMARK 3 T TENSOR REMARK 3 T11: 0.0465 T22: 0.3698 REMARK 3 T33: 0.4941 T12: 0.0524 REMARK 3 T13: -0.0482 T23: 0.0433 REMARK 3 L TENSOR REMARK 3 L11: 6.8514 L22: 1.4632 REMARK 3 L33: 8.2551 L12: 0.1112 REMARK 3 L13: 0.4433 L23: 1.9093 REMARK 3 S TENSOR REMARK 3 S11: -0.3901 S12: 0.1132 S13: -0.4673 REMARK 3 S21: -0.0281 S22: 0.2245 S23: 0.2185 REMARK 3 S31: 0.2313 S32: 1.6789 S33: 0.1656 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5I8D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218266. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97921 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15826 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.690 REMARK 200 RESOLUTION RANGE LOW (A) : 111.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.3800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.45400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: CADHERIN-8 (2A62) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.025M CALCIUM ACETATE, 0.1 M SODIUM REMARK 280 CACODYLATE, 25% MPD, PH 5.8, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 38.86100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.87700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 38.86100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.87700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1925 REMARK 465 LEU A 1926 REMARK 465 ALA A 1927 REMARK 465 ASP A 1928 REMARK 465 ASN A 2264 REMARK 465 ASP A 2265 REMARK 465 ASN A 2266 REMARK 465 LEU A 2267 REMARK 465 GLU A 2268 REMARK 465 HIS A 2269 REMARK 465 HIS A 2270 REMARK 465 HIS A 2271 REMARK 465 HIS A 2272 REMARK 465 HIS A 2273 REMARK 465 HIS A 2274 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A1930 77.50 -105.88 REMARK 500 LEU A1963 126.27 -172.37 REMARK 500 ASP A1970 -134.31 61.38 REMARK 500 HIS A1983 13.02 86.49 REMARK 500 GLU A2007 -9.60 -59.79 REMARK 500 PRO A2012 45.36 -80.60 REMARK 500 ASP A2198 -10.42 71.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A2301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A1930 OD1 REMARK 620 2 ASN A1932 O 90.6 REMARK 620 3 ASP A1966 OD1 147.7 90.8 REMARK 620 4 ASP A1966 OD2 164.5 90.0 47.8 REMARK 620 5 ASP A1968 OD2 75.9 75.0 73.3 119.1 REMARK 620 6 TYR A1972 O 98.8 161.1 72.5 85.3 91.3 REMARK 620 7 ASP A2022 OD2 72.7 93.6 139.4 91.9 146.4 104.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A2302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A1947 OE2 REMARK 620 2 ASP A2005 OD1 95.3 REMARK 620 3 GLU A2007 OE1 78.9 81.2 REMARK 620 4 ASP A2041 OD2 106.6 158.1 103.1 REMARK 620 5 HOH A2404 O 150.0 80.9 71.1 80.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A2303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A1947 OE1 REMARK 620 2 GLU A2007 OE1 91.0 REMARK 620 3 GLU A2007 OE2 112.7 48.5 REMARK 620 4 ASP A2038 OD1 86.8 128.7 85.8 REMARK 620 5 ASP A2039 O 71.8 145.7 165.7 80.9 REMARK 620 6 ASP A2041 OD1 78.3 76.3 122.3 151.5 71.4 REMARK 620 7 ASP A2074 OD1 157.4 96.4 87.8 104.7 90.6 82.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A2304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A2040 OD1 REMARK 620 2 ASN A2042 O 116.2 REMARK 620 3 ASP A2072 OD1 141.5 83.5 REMARK 620 4 ASP A2072 OD2 149.6 91.9 47.4 REMARK 620 5 ASP A2074 OD2 75.2 79.3 76.8 124.2 REMARK 620 6 ASN A2078 O 79.6 160.7 77.2 75.7 95.4 REMARK 620 7 ASP A2125 OD2 73.5 112.3 131.9 85.7 148.6 81.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A2305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A2057 OE1 REMARK 620 2 ASP A2110 OD1 86.4 REMARK 620 3 GLU A2112 OE2 81.9 86.2 REMARK 620 4 ASP A2146 OD1 82.6 158.4 73.9 REMARK 620 5 ASP A2146 OD2 73.2 143.9 118.8 48.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A2306 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A2057 OE2 REMARK 620 2 GLU A2112 OE1 109.5 REMARK 620 3 GLU A2112 OE2 93.8 50.9 REMARK 620 4 ASP A2143 OD1 90.3 83.8 133.1 REMARK 620 5 ILE A2144 O 83.4 155.5 151.7 75.2 REMARK 620 6 ASP A2146 OD1 92.3 120.6 73.8 152.7 78.1 REMARK 620 7 ASP A2179 OD1 170.7 79.8 92.0 91.0 88.0 82.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A2307 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A2145 OD1 REMARK 620 2 SER A2147 O 127.0 REMARK 620 3 ASP A2177 OD1 122.7 92.7 REMARK 620 4 ASP A2177 OD2 153.2 79.7 48.5 REMARK 620 5 ASP A2179 OD2 70.1 77.5 83.2 124.8 REMARK 620 6 ASP A2239 OD2 78.5 152.3 79.0 75.0 126.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 2301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 2302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 2303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 2304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 2305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 2306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 2307 DBREF 5I8D A 1926 2266 UNP Q99PF4 CAD23_MOUSE 1949 2289 SEQADV 5I8D MET A 1925 UNP Q99PF4 EXPRESSION TAG SEQADV 5I8D PRO A 2064 UNP Q99PF4 SER 2087 ENGINEERED MUTATION SEQADV 5I8D LEU A 2267 UNP Q99PF4 EXPRESSION TAG SEQADV 5I8D GLU A 2268 UNP Q99PF4 EXPRESSION TAG SEQADV 5I8D HIS A 2269 UNP Q99PF4 EXPRESSION TAG SEQADV 5I8D HIS A 2270 UNP Q99PF4 EXPRESSION TAG SEQADV 5I8D HIS A 2271 UNP Q99PF4 EXPRESSION TAG SEQADV 5I8D HIS A 2272 UNP Q99PF4 EXPRESSION TAG SEQADV 5I8D HIS A 2273 UNP Q99PF4 EXPRESSION TAG SEQADV 5I8D HIS A 2274 UNP Q99PF4 EXPRESSION TAG SEQRES 1 A 350 MET LEU ALA ASP GLU ASN ASP ASN HIS PRO LEU PHE THR SEQRES 2 A 350 GLU GLY THR TYR GLN ALA GLU VAL MET GLU ASN SER PRO SEQRES 3 A 350 ALA GLY THR PRO LEU THR VAL LEU ASN GLY PRO ILE LEU SEQRES 4 A 350 ALA LEU ASP ALA ASP GLU ASP VAL TYR ALA VAL VAL THR SEQRES 5 A 350 TYR GLN LEU LEU GLY THR HIS SER ASP LEU PHE VAL ILE SEQRES 6 A 350 ASP ASN SER THR GLY VAL VAL THR VAL ARG SER GLY ILE SEQRES 7 A 350 ILE ILE ASP ARG GLU ALA PHE SER PRO PRO PHE LEU GLU SEQRES 8 A 350 LEU LEU LEU LEU ALA GLU ASP ILE GLY GLN LEU ASN GLY SEQRES 9 A 350 THR ALA HIS LEU PHE ILE THR ILE LEU ASP ASP ASN ASP SEQRES 10 A 350 ASN TRP PRO THR PHE SER PRO PRO THR TYR THR VAL HIS SEQRES 11 A 350 LEU LEU GLU ASN CYS PRO PRO GLY PHE PRO VAL LEU GLN SEQRES 12 A 350 VAL THR ALA THR ASP GLU ASP SER GLY LEU ASN GLY GLU SEQRES 13 A 350 LEU VAL TYR ARG ILE GLU ALA GLY ALA GLN ASP ARG PHE SEQRES 14 A 350 LEU ILE HIS PRO VAL THR GLY VAL ILE ARG VAL GLY ASN SEQRES 15 A 350 ALA THR ILE ASP ARG GLU GLU GLN GLU SER TYR ARG LEU SEQRES 16 A 350 THR VAL VAL ALA THR ASP ARG GLY THR VAL PRO LEU SER SEQRES 17 A 350 GLY THR ALA ILE VAL THR ILE LEU ILE ASP ASP ILE ASN SEQRES 18 A 350 ASP SER ARG PRO GLU PHE LEU ASN PRO ILE GLN THR VAL SEQRES 19 A 350 SER VAL LEU GLU SER ALA GLU PRO GLY THR ILE ILE ALA SEQRES 20 A 350 ASN VAL THR ALA ILE ASP LEU ASP LEU ASN PRO LYS LEU SEQRES 21 A 350 GLU TYR HIS ILE ILE SER ILE VAL ALA LYS ASP ASP THR SEQRES 22 A 350 ASP ARG LEU VAL PRO ASP GLN GLU ASP ALA PHE ALA VAL SEQRES 23 A 350 ASN ILE ASN THR GLY SER VAL MET VAL LYS SER PRO LEU SEQRES 24 A 350 ASN ARG GLU LEU VAL ALA THR TYR GLU VAL THR LEU SER SEQRES 25 A 350 VAL ILE ASP ASN ALA SER ASP LEU PRO GLU HIS SER VAL SEQRES 26 A 350 SER VAL PRO ASN ALA LYS LEU THR VAL ASN ILE LEU ASP SEQRES 27 A 350 VAL ASN ASP ASN LEU GLU HIS HIS HIS HIS HIS HIS HET CA A2301 1 HET CA A2302 1 HET CA A2303 1 HET CA A2304 1 HET CA A2305 1 HET CA A2306 1 HET CA A2307 1 HETNAM CA CALCIUM ION FORMUL 2 CA 7(CA 2+) FORMUL 9 HOH *9(H2 O) HELIX 1 AA1 GLU A 1969 VAL A 1974 5 6 HELIX 2 AA2 HIS A 1983 ASP A 1985 5 3 HELIX 3 AA3 ASP A 2005 PHE A 2009 5 5 HELIX 4 AA4 SER A 2075 GLY A 2079 5 5 HELIX 5 AA5 LEU A 2244 SER A 2248 5 5 SHEET 1 AA1 2 LEU A1935 PHE A1936 0 SHEET 2 AA1 2 ALA A1964 LEU A1965 -1 O LEU A1965 N LEU A1935 SHEET 1 AA2 5 THR A1956 VAL A1957 0 SHEET 2 AA2 5 THR A1940 MET A1946 -1 N GLU A1944 O THR A1956 SHEET 3 AA2 5 ASN A2027 LEU A2037 1 O PHE A2033 N TYR A1941 SHEET 4 AA2 5 PHE A2013 GLU A2021 -1 N ALA A2020 O GLY A2028 SHEET 5 AA2 5 THR A1976 LEU A1980 -1 N LEU A1980 O LEU A2017 SHEET 1 AA3 2 PHE A1987 ILE A1989 0 SHEET 2 AA3 2 VAL A1996 VAL A1998 -1 O THR A1997 N VAL A1988 SHEET 1 AA4 2 THR A2045 PHE A2046 0 SHEET 2 AA4 2 ALA A2070 THR A2071 -1 O THR A2071 N THR A2045 SHEET 1 AA5 4 THR A2050 LEU A2056 0 SHEET 2 AA5 4 SER A2132 ASP A2142 1 O THR A2138 N TYR A2051 SHEET 3 AA5 4 SER A2116 THR A2124 -1 N ALA A2123 O GLY A2133 SHEET 4 AA5 4 VAL A2082 ALA A2087 -1 N VAL A2082 O THR A2124 SHEET 1 AA6 3 PRO A2064 GLN A2067 0 SHEET 2 AA6 3 VAL A2101 VAL A2104 -1 O ILE A2102 N LEU A2066 SHEET 3 AA6 3 PHE A2093 ILE A2095 -1 N LEU A2094 O ARG A2103 SHEET 1 AA7 2 GLU A2150 PHE A2151 0 SHEET 2 AA7 2 ALA A2175 ILE A2176 -1 O ILE A2176 N GLU A2150 SHEET 1 AA8 5 ILE A2155 LEU A2161 0 SHEET 2 AA8 5 ALA A2254 LEU A2261 1 O THR A2257 N VAL A2158 SHEET 3 AA8 5 THR A2230 ASP A2239 -1 N VAL A2233 O LEU A2256 SHEET 4 AA8 5 LEU A2184 LYS A2194 -1 N SER A2190 O THR A2234 SHEET 5 AA8 5 LEU A2200 VAL A2201 -1 O VAL A2201 N ALA A2193 SHEET 1 AA9 3 ILE A2169 ASN A2172 0 SHEET 2 AA9 3 SER A2216 VAL A2219 -1 O VAL A2217 N ILE A2170 SHEET 3 AA9 3 PHE A2208 VAL A2210 -1 N ALA A2209 O MET A2218 LINK OD1 ASN A1930 CA CA A2301 1555 1555 2.24 LINK O ASN A1932 CA CA A2301 1555 1555 2.42 LINK OE2 GLU A1947 CA CA A2302 1555 1555 2.48 LINK OE1 GLU A1947 CA CA A2303 1555 1555 2.32 LINK OD1 ASP A1966 CA CA A2301 1555 1555 2.73 LINK OD2 ASP A1966 CA CA A2301 1555 1555 2.61 LINK OD2 ASP A1968 CA CA A2301 1555 1555 2.40 LINK O TYR A1972 CA CA A2301 1555 1555 2.54 LINK OD1 ASP A2005 CA CA A2302 1555 1555 2.33 LINK OE1 GLU A2007 CA CA A2302 1555 1555 2.55 LINK OE1 GLU A2007 CA CA A2303 1555 1555 2.73 LINK OE2 GLU A2007 CA CA A2303 1555 1555 2.62 LINK OD2 ASP A2022 CA CA A2301 1555 1555 2.40 LINK OD1 ASP A2038 CA CA A2303 1555 1555 2.53 LINK O ASP A2039 CA CA A2303 1555 1555 2.54 LINK OD1 ASN A2040 CA CA A2304 1555 1555 2.35 LINK OD2 ASP A2041 CA CA A2302 1555 1555 2.27 LINK OD1 ASP A2041 CA CA A2303 1555 1555 2.36 LINK O ASN A2042 CA CA A2304 1555 1555 2.33 LINK OE1 GLU A2057 CA CA A2305 1555 1555 1.90 LINK OE2 GLU A2057 CA CA A2306 1555 1555 2.61 LINK OD1 ASP A2072 CA CA A2304 1555 1555 2.89 LINK OD2 ASP A2072 CA CA A2304 1555 1555 2.48 LINK OD1 ASP A2074 CA CA A2303 1555 1555 2.49 LINK OD2 ASP A2074 CA CA A2304 1555 1555 2.44 LINK O ASN A2078 CA CA A2304 1555 1555 2.54 LINK OD1 ASP A2110 CA CA A2305 1555 1555 2.30 LINK OE2 GLU A2112 CA CA A2305 1555 1555 2.47 LINK OE1 GLU A2112 CA CA A2306 1555 1555 2.75 LINK OE2 GLU A2112 CA CA A2306 1555 1555 2.36 LINK OD2 ASP A2125 CA CA A2304 1555 1555 2.35 LINK OD1 ASP A2143 CA CA A2306 1555 1555 2.30 LINK O ILE A2144 CA CA A2306 1555 1555 2.27 LINK OD1 ASN A2145 CA CA A2307 1555 1555 2.64 LINK OD1 ASP A2146 CA CA A2305 1555 1555 2.61 LINK OD2 ASP A2146 CA CA A2305 1555 1555 2.71 LINK OD1 ASP A2146 CA CA A2306 1555 1555 2.71 LINK O SER A2147 CA CA A2307 1555 1555 2.24 LINK OD1 ASP A2177 CA CA A2307 1555 1555 2.37 LINK OD2 ASP A2177 CA CA A2307 1555 1555 2.81 LINK OD1 ASP A2179 CA CA A2306 1555 1555 2.40 LINK OD2 ASP A2179 CA CA A2307 1555 1555 2.55 LINK OD2 ASP A2239 CA CA A2307 1555 1555 2.25 LINK CA CA A2302 O HOH A2404 1555 1555 2.25 CISPEP 1 SER A 2010 PRO A 2011 0 5.22 CISPEP 2 SER A 2047 PRO A 2048 0 -12.06 CISPEP 3 VAL A 2251 PRO A 2252 0 1.84 SITE 1 AC1 6 ASN A1930 ASN A1932 ASP A1966 ASP A1968 SITE 2 AC1 6 TYR A1972 ASP A2022 SITE 1 AC2 5 GLU A1947 ASP A2005 GLU A2007 ASP A2041 SITE 2 AC2 5 HOH A2404 SITE 1 AC3 6 GLU A1947 GLU A2007 ASP A2038 ASP A2039 SITE 2 AC3 6 ASP A2041 ASP A2074 SITE 1 AC4 6 ASN A2040 ASN A2042 ASP A2072 ASP A2074 SITE 2 AC4 6 ASN A2078 ASP A2125 SITE 1 AC5 4 GLU A2057 ASP A2110 GLU A2112 ASP A2146 SITE 1 AC6 6 GLU A2057 GLU A2112 ASP A2143 ILE A2144 SITE 2 AC6 6 ASP A2146 ASP A2179 SITE 1 AC7 5 ASN A2145 SER A2147 ASP A2177 ASP A2179 SITE 2 AC7 5 ASP A2239 CRYST1 77.722 67.754 112.782 90.00 99.12 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012866 0.000000 0.002066 0.00000 SCALE2 0.000000 0.014759 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008980 0.00000