HEADER OXIDOREDUCTASE 20-FEB-16 5I9L TITLE CRYSTAL STRUCTURE OF B. PSEUDOMALLEI FABI IN COMPLEX WITH NAD AND TITLE 2 PT404 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH]; COMPND 3 CHAIN: A; COMPND 4 EC: 1.3.1.9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI; SOURCE 3 ORGANISM_TAXID: 28450; SOURCE 4 GENE: FABI, FABI_2, ACT79_25590, AM256_11615, AM257_11635, SOURCE 5 AMS56_08605, DP46_2957, DP49_6839, ERS012314_03793, ERS012372_03823, SOURCE 6 SY87_14645, TR70_1075, VU09_13745; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENOYL-ACP REDUCTASE, BURKHOLDERIA PSEUDOMALLEI, DIPHENYL ETHERS, KEYWDS 2 SLOW-BINDING INHIBITORS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.W.HIRSCHBECK,S.ELTSCHKNER,P.J.TONGE,C.KISKER REVDAT 5 08-MAY-24 5I9L 1 REMARK REVDAT 4 06-SEP-17 5I9L 1 REMARK REVDAT 3 19-APR-17 5I9L 1 JRNL REVDAT 2 08-MAR-17 5I9L 1 JRNL REVDAT 1 22-FEB-17 5I9L 0 JRNL AUTH C.NECKLES,S.ELTSCHKNER,J.E.CUMMINGS,M.HIRSCHBECK,F.DARYAEE, JRNL AUTH 2 G.R.BOMMINENI,Z.ZHANG,L.SPAGNUOLO,W.YU,S.DAVOODI, JRNL AUTH 3 R.A.SLAYDEN,C.KISKER,P.J.TONGE JRNL TITL RATIONALIZING THE BINDING KINETICS FOR THE INHIBITION OF THE JRNL TITL 2 BURKHOLDERIA PSEUDOMALLEI FABI1 ENOYL-ACP REDUCTASE. JRNL REF BIOCHEMISTRY V. 56 1865 2017 JRNL REFN ISSN 1520-4995 JRNL PMID 28225601 JRNL DOI 10.1021/ACS.BIOCHEM.6B01048 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7_650 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 3 NUMBER OF REFLECTIONS : 21245 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1082 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.5396 - 3.5993 1.00 2849 131 0.1560 0.1886 REMARK 3 2 3.5993 - 2.8572 0.99 2671 167 0.1727 0.2128 REMARK 3 3 2.8572 - 2.4961 0.97 2643 138 0.1859 0.2158 REMARK 3 4 2.4961 - 2.2679 0.95 2581 118 0.1872 0.2214 REMARK 3 5 2.2679 - 2.1054 0.93 2513 140 0.1800 0.2302 REMARK 3 6 2.1054 - 1.9812 0.89 2362 129 0.1942 0.2352 REMARK 3 7 1.9812 - 1.8820 0.87 2313 131 0.2023 0.2394 REMARK 3 8 1.8820 - 1.8001 0.84 2231 128 0.2339 0.3003 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 41.53 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.240 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -12.02750 REMARK 3 B22 (A**2) : 4.01230 REMARK 3 B33 (A**2) : 8.01520 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2024 REMARK 3 ANGLE : 1.147 2747 REMARK 3 CHIRALITY : 0.074 313 REMARK 3 PLANARITY : 0.004 348 REMARK 3 DIHEDRAL : 14.186 731 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 2:17) REMARK 3 ORIGIN FOR THE GROUP (A): 26.7672 1.6715 -14.4306 REMARK 3 T TENSOR REMARK 3 T11: 0.2328 T22: 0.5824 REMARK 3 T33: 0.3237 T12: -0.0829 REMARK 3 T13: 0.0481 T23: -0.2656 REMARK 3 L TENSOR REMARK 3 L11: 0.2021 L22: 0.5223 REMARK 3 L33: 1.2696 L12: 0.1632 REMARK 3 L13: -0.3163 L23: 0.2078 REMARK 3 S TENSOR REMARK 3 S11: 0.0650 S12: -0.2802 S13: 0.2547 REMARK 3 S21: -0.0365 S22: 0.2013 S23: -0.0953 REMARK 3 S31: 0.0205 S32: 0.8589 S33: -0.0086 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 18:42) REMARK 3 ORIGIN FOR THE GROUP (A): 26.5738 6.0260 -16.2936 REMARK 3 T TENSOR REMARK 3 T11: 0.1996 T22: 0.5690 REMARK 3 T33: 0.3450 T12: -0.1641 REMARK 3 T13: 0.0770 T23: -0.2302 REMARK 3 L TENSOR REMARK 3 L11: 0.1536 L22: 0.4418 REMARK 3 L33: 0.6147 L12: 0.1121 REMARK 3 L13: 0.0566 L23: 0.0449 REMARK 3 S TENSOR REMARK 3 S11: 0.2917 S12: -0.2093 S13: 0.3853 REMARK 3 S21: -0.1668 S22: 0.2505 S23: -0.2747 REMARK 3 S31: -0.1990 S32: 0.6041 S33: 0.1601 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 43:48) REMARK 3 ORIGIN FOR THE GROUP (A): 25.8886 11.9331 -29.4587 REMARK 3 T TENSOR REMARK 3 T11: 0.3211 T22: 0.7346 REMARK 3 T33: 0.7865 T12: -0.3802 REMARK 3 T13: 0.2708 T23: -0.1764 REMARK 3 L TENSOR REMARK 3 L11: 0.0020 L22: 0.0005 REMARK 3 L33: 0.0185 L12: 0.0036 REMARK 3 L13: -0.0032 L23: -0.0096 REMARK 3 S TENSOR REMARK 3 S11: -0.0222 S12: -0.0206 S13: 0.0380 REMARK 3 S21: 0.0077 S22: -0.0421 S23: 0.0700 REMARK 3 S31: -0.0344 S32: 0.0797 S33: -0.0383 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 49:93) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3365 -0.7448 -24.2495 REMARK 3 T TENSOR REMARK 3 T11: 0.2373 T22: 0.4950 REMARK 3 T33: 0.2486 T12: -0.0466 REMARK 3 T13: 0.0546 T23: -0.1643 REMARK 3 L TENSOR REMARK 3 L11: 0.6512 L22: 0.3626 REMARK 3 L33: 0.8220 L12: -0.0439 REMARK 3 L13: -0.0977 L23: -0.3451 REMARK 3 S TENSOR REMARK 3 S11: 0.1660 S12: 0.1398 S13: 0.1395 REMARK 3 S21: -0.1672 S22: 0.1181 S23: 0.0071 REMARK 3 S31: -0.1394 S32: 0.6649 S33: -0.0108 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 94:138) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1498 2.6280 -22.2168 REMARK 3 T TENSOR REMARK 3 T11: 0.1960 T22: 0.2047 REMARK 3 T33: 0.2512 T12: -0.0191 REMARK 3 T13: 0.0356 T23: -0.0698 REMARK 3 L TENSOR REMARK 3 L11: 0.8741 L22: 0.2857 REMARK 3 L33: 1.0378 L12: -0.1641 REMARK 3 L13: -0.2480 L23: -0.0010 REMARK 3 S TENSOR REMARK 3 S11: -0.0179 S12: 0.3975 S13: 0.3521 REMARK 3 S21: -0.0360 S22: 0.2335 S23: -0.0299 REMARK 3 S31: -0.1053 S32: 0.2125 S33: 0.0327 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 139:194) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7701 1.5604 -11.3802 REMARK 3 T TENSOR REMARK 3 T11: 0.1881 T22: 0.1761 REMARK 3 T33: 0.2528 T12: -0.0134 REMARK 3 T13: 0.0288 T23: -0.0666 REMARK 3 L TENSOR REMARK 3 L11: 0.3704 L22: 0.5459 REMARK 3 L33: 0.9837 L12: 0.1695 REMARK 3 L13: -0.0468 L23: -0.2999 REMARK 3 S TENSOR REMARK 3 S11: 0.1055 S12: 0.0661 S13: 0.1483 REMARK 3 S21: 0.0489 S22: 0.1189 S23: 0.0873 REMARK 3 S31: -0.0900 S32: 0.1698 S33: 0.1163 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 195:206) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4538 20.1681 -14.1595 REMARK 3 T TENSOR REMARK 3 T11: 0.4849 T22: 0.3898 REMARK 3 T33: 0.5562 T12: -0.0236 REMARK 3 T13: 0.1268 T23: 0.0744 REMARK 3 L TENSOR REMARK 3 L11: 0.0692 L22: 0.1588 REMARK 3 L33: 0.0838 L12: -0.0810 REMARK 3 L13: 0.0776 L23: -0.0904 REMARK 3 S TENSOR REMARK 3 S11: -0.0496 S12: 0.4079 S13: 0.1389 REMARK 3 S21: -0.0585 S22: -0.0481 S23: -0.0104 REMARK 3 S31: -0.1623 S32: 0.0261 S33: -0.0188 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 207:258) REMARK 3 ORIGIN FOR THE GROUP (A): 14.2335 8.7317 -1.6762 REMARK 3 T TENSOR REMARK 3 T11: 0.2187 T22: 0.2427 REMARK 3 T33: 0.2715 T12: -0.0553 REMARK 3 T13: 0.0435 T23: -0.0997 REMARK 3 L TENSOR REMARK 3 L11: 0.2509 L22: 0.4734 REMARK 3 L33: 1.0459 L12: 0.1346 REMARK 3 L13: 0.3290 L23: -0.0289 REMARK 3 S TENSOR REMARK 3 S11: 0.0007 S12: 0.1075 S13: 0.0112 REMARK 3 S21: 0.0621 S22: 0.2062 S23: -0.0073 REMARK 3 S31: -0.1805 S32: 0.3715 S33: 0.1251 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5I9L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218483. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22817 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 43.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.63700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BISTRIS, PH 6.5, 30 % PEG 400, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.28950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.53150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 43.18750 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.28950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.53150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 43.18750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.28950 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.53150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.18750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.28950 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.53150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 43.18750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -142.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 447 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 465 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 259 REMARK 465 GLY A 260 REMARK 465 LEU A 261 REMARK 465 GLU A 262 REMARK 465 GLU A 263 REMARK 465 LYS A 264 REMARK 465 LEU A 265 REMARK 465 ALA A 266 REMARK 465 ALA A 267 REMARK 465 ALA A 268 REMARK 465 LEU A 269 REMARK 465 GLU A 270 REMARK 465 HIS A 271 REMARK 465 HIS A 272 REMARK 465 HIS A 273 REMARK 465 HIS A 274 REMARK 465 HIS A 275 REMARK 465 HIS A 276 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 234 CA CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 509 O HOH A 511 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 155 -26.01 77.91 REMARK 500 ASN A 157 -118.15 49.95 REMARK 500 LYS A 193 74.35 -67.45 REMARK 500 ASP A 248 29.50 -150.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9W7 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 303 DBREF1 5I9L A 1 263 UNP A0A069B9A4_BURPE DBREF2 5I9L A A0A069B9A4 1 263 SEQADV 5I9L LYS A 264 UNP A0A069B9A EXPRESSION TAG SEQADV 5I9L LEU A 265 UNP A0A069B9A EXPRESSION TAG SEQADV 5I9L ALA A 266 UNP A0A069B9A EXPRESSION TAG SEQADV 5I9L ALA A 267 UNP A0A069B9A EXPRESSION TAG SEQADV 5I9L ALA A 268 UNP A0A069B9A EXPRESSION TAG SEQADV 5I9L LEU A 269 UNP A0A069B9A EXPRESSION TAG SEQADV 5I9L GLU A 270 UNP A0A069B9A EXPRESSION TAG SEQADV 5I9L HIS A 271 UNP A0A069B9A EXPRESSION TAG SEQADV 5I9L HIS A 272 UNP A0A069B9A EXPRESSION TAG SEQADV 5I9L HIS A 273 UNP A0A069B9A EXPRESSION TAG SEQADV 5I9L HIS A 274 UNP A0A069B9A EXPRESSION TAG SEQADV 5I9L HIS A 275 UNP A0A069B9A EXPRESSION TAG SEQADV 5I9L HIS A 276 UNP A0A069B9A EXPRESSION TAG SEQRES 1 A 276 MET GLY PHE LEU ASP GLY LYS ARG ILE LEU LEU THR GLY SEQRES 2 A 276 LEU LEU SER ASN ARG SER ILE ALA TYR GLY ILE ALA LYS SEQRES 3 A 276 ALA CYS LYS ARG GLU GLY ALA GLU LEU ALA PHE THR TYR SEQRES 4 A 276 VAL GLY ASP ARG PHE LYS ASP ARG ILE THR GLU PHE ALA SEQRES 5 A 276 ALA GLU PHE GLY SER GLU LEU VAL PHE PRO CYS ASP VAL SEQRES 6 A 276 ALA ASP ASP ALA GLN ILE ASP ALA LEU PHE ALA SER LEU SEQRES 7 A 276 LYS THR HIS TRP ASP SER LEU ASP GLY LEU VAL HIS SER SEQRES 8 A 276 ILE GLY PHE ALA PRO ARG GLU ALA ILE ALA GLY ASP PHE SEQRES 9 A 276 LEU ASP GLY LEU THR ARG GLU ASN PHE ARG ILE ALA HIS SEQRES 10 A 276 ASP ILE SER ALA TYR SER PHE PRO ALA LEU ALA LYS ALA SEQRES 11 A 276 ALA LEU PRO MET LEU SER ASP ASP ALA SER LEU LEU THR SEQRES 12 A 276 LEU SER TYR LEU GLY ALA GLU ARG ALA ILE PRO ASN TYR SEQRES 13 A 276 ASN THR MET GLY LEU ALA LYS ALA ALA LEU GLU ALA SER SEQRES 14 A 276 VAL ARG TYR LEU ALA VAL SER LEU GLY ALA LYS GLY VAL SEQRES 15 A 276 ARG VAL ASN ALA ILE SER ALA GLY PRO ILE LYS THR LEU SEQRES 16 A 276 ALA ALA SER GLY ILE LYS SER PHE GLY LYS ILE LEU ASP SEQRES 17 A 276 PHE VAL GLU SER ASN SER PRO LEU LYS ARG ASN VAL THR SEQRES 18 A 276 ILE GLU GLN VAL GLY ASN ALA GLY ALA PHE LEU LEU SER SEQRES 19 A 276 ASP LEU ALA SER GLY VAL THR ALA GLU VAL MET HIS VAL SEQRES 20 A 276 ASP SER GLY PHE ASN ALA VAL VAL GLY GLY MET ALA GLY SEQRES 21 A 276 LEU GLU GLU LYS LEU ALA ALA ALA LEU GLU HIS HIS HIS SEQRES 22 A 276 HIS HIS HIS HET NAD A 301 44 HET 9W7 A 302 21 HET GOL A 303 6 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 9W7 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHYL-4-FLUOROPHENOL HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NAD C21 H27 N7 O14 P2 FORMUL 3 9W7 C14 H11 CL F N O4 FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *153(H2 O) HELIX 1 AA1 SER A 19 GLU A 31 1 13 HELIX 2 AA2 GLY A 41 ARG A 43 5 3 HELIX 3 AA3 PHE A 44 PHE A 55 1 12 HELIX 4 AA4 ASP A 67 TRP A 82 1 16 HELIX 5 AA5 PRO A 96 ALA A 101 5 6 HELIX 6 AA6 THR A 109 ALA A 121 1 13 HELIX 7 AA7 TYR A 122 LEU A 132 1 11 HELIX 8 AA8 TYR A 146 GLU A 150 5 5 HELIX 9 AA9 TYR A 156 ALA A 179 1 24 HELIX 10 AB1 LEU A 195 GLY A 199 5 5 HELIX 11 AB2 SER A 202 SER A 214 1 13 HELIX 12 AB3 THR A 221 SER A 234 1 14 HELIX 13 AB4 ASP A 235 SER A 238 5 4 HELIX 14 AB5 GLY A 250 VAL A 254 5 5 SHEET 1 AA1 7 VAL A 60 PRO A 62 0 SHEET 2 AA1 7 GLU A 34 TYR A 39 1 N PHE A 37 O PHE A 61 SHEET 3 AA1 7 ARG A 8 LEU A 11 1 N LEU A 11 O ALA A 36 SHEET 4 AA1 7 LEU A 85 HIS A 90 1 O VAL A 89 N LEU A 10 SHEET 5 AA1 7 LEU A 135 SER A 145 1 O LEU A 142 N HIS A 90 SHEET 6 AA1 7 ARG A 183 ALA A 189 1 O ARG A 183 N LEU A 141 SHEET 7 AA1 7 VAL A 244 VAL A 247 1 O MET A 245 N ALA A 186 SITE 1 AC1 28 GLY A 13 LEU A 15 SER A 19 ILE A 20 SITE 2 AC1 28 VAL A 40 CYS A 63 ASP A 64 VAL A 65 SITE 3 AC1 28 SER A 91 ILE A 92 GLY A 93 LEU A 144 SITE 4 AC1 28 SER A 145 TYR A 146 LYS A 163 ALA A 189 SITE 5 AC1 28 GLY A 190 PRO A 191 ILE A 192 THR A 194 SITE 6 AC1 28 ALA A 196 9W7 A 302 HOH A 425 HOH A 428 SITE 7 AC1 28 HOH A 454 HOH A 464 HOH A 474 HOH A 507 SITE 1 AC2 10 GLY A 93 PHE A 94 ALA A 95 ILE A 100 SITE 2 AC2 10 TYR A 146 TYR A 156 ALA A 196 ALA A 197 SITE 3 AC2 10 PHE A 203 NAD A 301 SITE 1 AC3 1 ASP A 235 CRYST1 74.579 75.063 86.375 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013409 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013322 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011577 0.00000