HEADER TRANSFERASE 23-FEB-16 5ICC TITLE CRYSTAL STRUCTURE OF (S)-NORCOCLAURINE 6-O-METHYLTRANSFERASE WITH S- TITLE 2 ADENOSYL-L-HOMOCYSTEINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: (S)-NORCOCLAURINE 6-O-METHYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.1.1.128; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THALICTRUM FLAVUM SUBSP. GLAUCUM; SOURCE 3 ORGANISM_COMMON: YELLOW MEADOW RUE; SOURCE 4 ORGANISM_TAXID: 150095; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS METHYLTRANSFERASE, BENZYLISOQUINOLINE ALKALOID, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.Y.ROBIN,M.GRAINDORGE,C.GIUSTINI,R.DUMAS,M.MATRINGE REVDAT 3 10-JAN-24 5ICC 1 LINK REVDAT 2 12-OCT-16 5ICC 1 JRNL REVDAT 1 08-JUN-16 5ICC 0 JRNL AUTH A.Y.ROBIN,C.GIUSTINI,M.GRAINDORGE,M.MATRINGE,R.DUMAS JRNL TITL CRYSTAL STRUCTURE OF NORCOCLAURINE-6-O-METHYLTRANSFERASE, A JRNL TITL 2 KEY RATE-LIMITING STEP IN THE SYNTHESIS OF JRNL TITL 3 BENZYLISOQUINOLINE ALKALOIDS. JRNL REF PLANT J. V. 87 641 2016 JRNL REFN ESSN 1365-313X JRNL PMID 27232113 JRNL DOI 10.1111/TPJ.13225 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 26572 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1329 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1767 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1910 REMARK 3 BIN FREE R VALUE SET COUNT : 93 REMARK 3 BIN FREE R VALUE : 0.2500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2727 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 70 REMARK 3 SOLVENT ATOMS : 226 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.40000 REMARK 3 B22 (A**2) : -1.22000 REMARK 3 B33 (A**2) : -0.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.149 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.140 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.090 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.014 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2951 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4011 ; 1.522 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 389 ; 5.576 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 115 ;36.215 ;24.957 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 517 ;12.795 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;10.373 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 457 ; 0.129 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2169 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1814 ; 1.356 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2948 ; 2.158 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1137 ; 3.426 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1043 ; 4.950 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5ICC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218604. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9797 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS, XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26573 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.1500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.39300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, PHASER REMARK 200 STARTING MODEL: 1ZG3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, SODIUM CHLORIDE, PHOSPHATE REMARK 280 CITRATE BUFFER, PH 5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 36.82000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.49500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.82000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.49500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 K K A 402 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 7 CG CD OE1 OE2 REMARK 470 ASP A 85 CG OD1 OD2 REMARK 470 LYS A 127 NZ REMARK 470 ASP A 133 CG OD1 OD2 REMARK 470 LYS A 179 CD CE NZ REMARK 470 LYS A 207 CD CE NZ REMARK 470 LYS A 213 NZ REMARK 470 GLU A 231 CG CD OE1 OE2 REMARK 470 LYS A 261 CD CE NZ REMARK 470 LYS A 268 CE NZ REMARK 470 LYS A 271 NZ REMARK 470 ARG A 276 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 277 CG OD1 OD2 REMARK 470 LYS A 291 CD CE NZ REMARK 470 LYS A 322 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 164 CG GLU A 164 CD 0.093 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 230 -76.70 -104.33 REMARK 500 ILE A 254 -62.33 -107.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 5 LYS A 6 139.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 404 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 90 OH REMARK 620 2 HOH A 574 O 117.4 REMARK 620 3 HOH A 605 O 126.0 116.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 402 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 626 O REMARK 620 2 HOH A 626 O 79.3 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 415 DBREF 5ICC A 3 350 UNP Q5C9L7 Q5C9L7_THLFG 3 350 SEQADV 5ICC GLY A -1 UNP Q5C9L7 EXPRESSION TAG SEQADV 5ICC ALA A 0 UNP Q5C9L7 EXPRESSION TAG SEQADV 5ICC MET A 1 UNP Q5C9L7 EXPRESSION TAG SEQADV 5ICC VAL A 2 UNP Q5C9L7 EXPRESSION TAG SEQRES 1 A 352 GLY ALA MET VAL MET ILE ASN LYS GLU ASN LEU SER SER SEQRES 2 A 352 GLN ALA LYS LEU TRP ASN PHE ILE TYR GLY PHE ALA ASP SEQRES 3 A 352 SER LEU VAL LEU LYS SER ALA VAL GLN LEU ASP LEU ALA SEQRES 4 A 352 ASN ILE ILE HIS ASN HIS GLY SER PRO MET THR LEU SER SEQRES 5 A 352 GLU LEU SER LEU HIS LEU PRO SER GLN PRO VAL ASN GLN SEQRES 6 A 352 ASP ALA LEU TYR ARG VAL LEU ARG TYR LEU VAL HIS MET SEQRES 7 A 352 LYS LEU PHE THR LYS SER SER ILE ASP GLY GLU LEU ARG SEQRES 8 A 352 TYR GLY LEU ALA PRO PRO ALA LYS PHE LEU VAL LYS GLY SEQRES 9 A 352 TRP ASP LYS CYS MET LEU GLY ALA ILE LEU THR ILE THR SEQRES 10 A 352 ASP LYS ASP PHE MET ALA PRO TRP HIS TYR LEU LYS GLU SEQRES 11 A 352 GLY ILE LEU ASN ASP GLY SER THR SER THR ALA PHE GLU SEQRES 12 A 352 LYS ALA LEU GLY THR ASN ILE TRP ASP TYR MET ALA GLU SEQRES 13 A 352 HIS PRO GLU LYS ASN GLN LEU PHE ASN GLU GLY MET ALA SEQRES 14 A 352 ASN ASP THR ARG LEU ILE MET SER ALA LEU VAL LYS GLU SEQRES 15 A 352 CYS SER SER MET PHE ASP GLY ILE THR THR ILE VAL ASP SEQRES 16 A 352 VAL GLY GLY GLY THR GLY THR ALA VAL ARG ASN ILE ALA SEQRES 17 A 352 LYS ALA PHE PRO HIS ILE LYS CYS THR VAL TYR ASP LEU SEQRES 18 A 352 PRO HIS VAL ILE ALA ASP SER PRO GLY TYR THR GLU ILE SEQRES 19 A 352 ASN SER ILE GLN GLY ASP MET PHE LYS TYR ILE PRO ASN SEQRES 20 A 352 ALA ASP ALA ILE MET MET LYS CYS ILE LEU HIS ASP TRP SEQRES 21 A 352 ASP ASP LYS GLU CYS ILE GLU ILE LEU LYS ARG CYS LYS SEQRES 22 A 352 ASP ALA VAL PRO ARG ASP GLY GLY LYS VAL ILE ILE ILE SEQRES 23 A 352 ASP ILE ILE LEU ASP VAL LYS SER GLU HIS PRO TYR THR SEQRES 24 A 352 LYS MET ARG LEU THR LEU ASP LEU ASP MET MET LEU ASN SEQRES 25 A 352 THR GLY GLY LYS GLU ARG THR GLU GLU GLU TRP LYS LYS SEQRES 26 A 352 LEU ILE HIS ASP ALA GLY TYR LYS GLY TYR LYS ILE THR SEQRES 27 A 352 HIS ILE SER ALA VAL GLN SER VAL ILE GLU ALA TYR PRO SEQRES 28 A 352 TYR HET SAH A 401 26 HET K A 402 1 HET K A 403 1 HET NA A 404 1 HET NA A 405 1 HET EDO A 406 4 HET EDO A 407 4 HET EDO A 408 4 HET EDO A 409 4 HET EDO A 410 8 HET EDO A 411 4 HET EDO A 412 4 HET EDO A 413 4 HET EDO A 414 4 HET EDO A 415 4 HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM K POTASSIUM ION HETNAM NA SODIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 SAH C14 H20 N6 O5 S FORMUL 3 K 2(K 1+) FORMUL 5 NA 2(NA 1+) FORMUL 7 EDO 10(C2 H6 O2) FORMUL 17 HOH *226(H2 O) HELIX 1 AA1 ASN A 8 TYR A 20 1 13 HELIX 2 AA2 TYR A 20 ASP A 35 1 16 HELIX 3 AA3 ASP A 35 GLY A 44 1 10 HELIX 4 AA4 THR A 48 HIS A 55 1 8 HELIX 5 AA5 ASN A 62 MET A 76 1 15 HELIX 6 AA6 PRO A 94 VAL A 100 5 7 HELIX 7 AA7 MET A 107 THR A 115 1 9 HELIX 8 AA8 ASP A 116 ALA A 121 1 6 HELIX 9 AA9 PRO A 122 HIS A 124 5 3 HELIX 10 AB1 TYR A 125 LEU A 131 1 7 HELIX 11 AB2 THR A 138 GLY A 145 1 8 HELIX 12 AB3 ASN A 147 HIS A 155 1 9 HELIX 13 AB4 HIS A 155 CYS A 181 1 27 HELIX 14 AB5 SER A 182 ASP A 186 5 5 HELIX 15 AB6 GLY A 199 PHE A 209 1 11 HELIX 16 AB7 LEU A 219 ALA A 224 1 6 HELIX 17 AB8 ILE A 254 TRP A 258 5 5 HELIX 18 AB9 ASP A 259 ASP A 272 1 14 HELIX 19 AC1 TYR A 296 THR A 311 1 16 HELIX 20 AC2 GLU A 318 ALA A 328 1 11 SHEET 1 AA1 2 PHE A 79 ILE A 84 0 SHEET 2 AA1 2 GLU A 87 LEU A 92 -1 O GLU A 87 N ILE A 84 SHEET 1 AA2 7 ASN A 233 GLN A 236 0 SHEET 2 AA2 7 LYS A 213 ASP A 218 1 N VAL A 216 O ILE A 235 SHEET 3 AA2 7 THR A 190 VAL A 194 1 N ASP A 193 O THR A 215 SHEET 4 AA2 7 ALA A 248 LYS A 252 1 O MET A 250 N VAL A 192 SHEET 5 AA2 7 LYS A 280 ASP A 285 1 O ILE A 282 N ILE A 249 SHEET 6 AA2 7 SER A 343 TYR A 348 -1 O ILE A 345 N ILE A 283 SHEET 7 AA2 7 GLY A 332 THR A 336 -1 N THR A 336 O VAL A 344 SHEET 1 AA3 2 ILE A 287 LEU A 288 0 SHEET 2 AA3 2 ARG A 316 THR A 317 1 O ARG A 316 N LEU A 288 LINK OH TYR A 90 NA NA A 404 1555 1555 2.74 LINK OG1 THR A 297 NA NA A 405 1555 1555 3.13 LINK K K A 402 O HOH A 626 1555 1555 3.04 LINK K K A 402 O HOH A 626 1555 2555 3.04 LINK NA NA A 404 O HOH A 574 1555 1555 2.83 LINK NA NA A 404 O HOH A 605 1555 1555 2.66 CISPEP 1 GLN A 59 PRO A 60 0 1.99 SITE 1 AC1 22 TRP A 149 MET A 166 THR A 170 GLY A 195 SITE 2 AC1 22 ASP A 218 LEU A 219 VAL A 222 GLY A 237 SITE 3 AC1 22 ASP A 238 MET A 239 LYS A 252 CYS A 253 SITE 4 AC1 22 ILE A 254 ASP A 257 EDO A 414 HOH A 543 SITE 5 AC1 22 HOH A 550 HOH A 567 HOH A 615 HOH A 623 SITE 6 AC1 22 HOH A 631 HOH A 634 SITE 1 AC2 2 HIS A 124 HOH A 626 SITE 1 AC3 4 ASN A 8 HIS A 155 PRO A 156 GLU A 157 SITE 1 AC4 4 TYR A 67 TYR A 90 HOH A 574 HOH A 605 SITE 1 AC5 3 ASP A 289 THR A 297 ARG A 300 SITE 1 AC6 6 LYS A 14 ASN A 17 PHE A 18 HOH A 515 SITE 2 AC6 6 HOH A 568 HOH A 642 SITE 1 AC7 3 PRO A 220 HIS A 221 HOH A 610 SITE 1 AC8 3 ARG A 269 ASP A 272 HOH A 502 SITE 1 AC9 5 THR A 317 GLU A 318 GLU A 319 HOH A 520 SITE 2 AC9 5 HOH A 548 SITE 1 AD1 11 LEU A 9 GLU A 154 TYR A 296 ARG A 300 SITE 2 AD1 11 HIS A 337 SER A 339 ALA A 340 SER A 343 SITE 3 AD1 11 HOH A 505 HOH A 519 HOH A 599 SITE 1 AD2 5 LYS A 29 LEU A 112 THR A 115 ASP A 116 SITE 2 AD2 5 HOH A 603 SITE 1 AD3 5 ILE A 40 GLY A 44 SER A 45 GLY A 91 SITE 2 AD3 5 LEU A 92 SITE 1 AD4 1 LYS A 101 SITE 1 AD5 3 ASP A 238 SAH A 401 HOH A 570 SITE 1 AD6 4 TYR A 67 LYS A 81 LEU A 88 HOH A 605 CRYST1 73.640 108.990 40.910 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013580 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009175 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024444 0.00000