HEADER VIRAL PROTEIN 25-FEB-16 5IF2 TITLE CRYSTAL STRUCTURE OF POLYMERASE ACID PROTEIN (PA) FROM INFLUENZA A TITLE 2 VIRUS, WILSON-SMITH/1933 (H1N1) BOUND TO FRAGMENT HIT EBSI-576 (5,6- TITLE 3 DICHLORO-1H-1,3-BENZODIAZOL-2-YL)METHANOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYMERASE ACIDIC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RNA-DIRECTED RNA POLYMERASE SUBUNIT P2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (STRAIN A/WILSON-SMITH/1933 SOURCE 3 H1N1); SOURCE 4 ORGANISM_TAXID: 381518; SOURCE 5 STRAIN: A/WILSON-SMITH/1933 H1N1; SOURCE 6 GENE: PA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NIAID, STRUCTURAL GENOMICS, FRAGMENT SCREENING, STD NMR, FLU, RDRP, KEYWDS 2 POLYMERASE, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS KEYWDS 3 DISEASE, SSGCID, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 06-MAR-24 5IF2 1 REMARK REVDAT 1 22-FEB-17 5IF2 0 JRNL AUTH P.PIERCE,M.M.MURUTHI,J.ABENDROTH,S.O.MOEN,D.W.BEGLEY, JRNL AUTH 2 D.R.DAVIES,V.M.MARATHIAS,B.L.STAKER,P.J.MYLER,D.D.LORIMER, JRNL AUTH 3 T.E.EDWARDS JRNL TITL FRAGMENT SCREENING BY STD NMR IDENTIFIES NOVEL SITE BINDERS JRNL TITL 2 AGAINST INFLUENZA A VIRUS POLYMERASE PA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 24625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1948 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.3123 - 5.6605 1.00 1854 144 0.2022 0.2474 REMARK 3 2 5.6605 - 4.4943 1.00 1688 162 0.1621 0.1783 REMARK 3 3 4.4943 - 3.9266 1.00 1647 149 0.1407 0.1734 REMARK 3 4 3.9266 - 3.5677 1.00 1619 151 0.1680 0.1788 REMARK 3 5 3.5677 - 3.3121 1.00 1588 148 0.1681 0.2323 REMARK 3 6 3.3121 - 3.1169 1.00 1608 139 0.1802 0.2327 REMARK 3 7 3.1169 - 2.9608 1.00 1610 136 0.1877 0.2522 REMARK 3 8 2.9608 - 2.8320 1.00 1588 137 0.1847 0.2610 REMARK 3 9 2.8320 - 2.7230 1.00 1577 126 0.1823 0.2016 REMARK 3 10 2.7230 - 2.6290 1.00 1614 113 0.1747 0.2308 REMARK 3 11 2.6290 - 2.5468 1.00 1569 125 0.1764 0.2339 REMARK 3 12 2.5468 - 2.4740 1.00 1581 130 0.1850 0.2526 REMARK 3 13 2.4740 - 2.4089 1.00 1578 149 0.2011 0.2664 REMARK 3 14 2.4089 - 2.3501 1.00 1556 139 0.2126 0.2735 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.23 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3278 REMARK 3 ANGLE : 0.788 4443 REMARK 3 CHIRALITY : 0.044 496 REMARK 3 PLANARITY : 0.005 567 REMARK 3 DIHEDRAL : 15.880 1991 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 265 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.8649 -30.5138 49.6339 REMARK 3 T TENSOR REMARK 3 T11: 0.3357 T22: 0.2372 REMARK 3 T33: 0.2749 T12: 0.1355 REMARK 3 T13: 0.0834 T23: 0.0829 REMARK 3 L TENSOR REMARK 3 L11: 0.7681 L22: 2.1444 REMARK 3 L33: 2.6616 L12: 0.5701 REMARK 3 L13: 0.8823 L23: -0.5570 REMARK 3 S TENSOR REMARK 3 S11: -0.1428 S12: 0.1100 S13: 0.0027 REMARK 3 S21: -0.1691 S22: -0.0900 S23: -0.0055 REMARK 3 S31: -0.0137 S32: -0.3246 S33: -0.0634 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 303 THROUGH 350 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.4253 -43.4695 62.0990 REMARK 3 T TENSOR REMARK 3 T11: 0.3081 T22: 0.2273 REMARK 3 T33: 0.3123 T12: 0.0925 REMARK 3 T13: 0.0903 T23: 0.0725 REMARK 3 L TENSOR REMARK 3 L11: 0.0263 L22: 0.8803 REMARK 3 L33: 1.0754 L12: -0.0165 REMARK 3 L13: 0.0534 L23: -0.0147 REMARK 3 S TENSOR REMARK 3 S11: -0.0619 S12: -0.2450 S13: -0.2538 REMARK 3 S21: 0.1239 S22: 0.0877 S23: 0.1949 REMARK 3 S31: 0.3585 S32: -0.2238 S33: 0.0013 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 351 THROUGH 405 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.6808 -36.0591 65.8949 REMARK 3 T TENSOR REMARK 3 T11: 0.3607 T22: 0.2230 REMARK 3 T33: 0.3492 T12: 0.3260 REMARK 3 T13: 0.1082 T23: 0.1112 REMARK 3 L TENSOR REMARK 3 L11: 0.2450 L22: 0.6832 REMARK 3 L33: 0.3321 L12: -0.0710 REMARK 3 L13: 0.2828 L23: -0.0793 REMARK 3 S TENSOR REMARK 3 S11: -0.0390 S12: -0.0109 S13: -0.0119 REMARK 3 S21: 0.1641 S22: -0.0774 S23: -0.1833 REMARK 3 S31: -0.0356 S32: 0.0477 S33: 0.0241 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 406 THROUGH 602 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.4605 -25.1407 51.2538 REMARK 3 T TENSOR REMARK 3 T11: 0.2716 T22: 0.1830 REMARK 3 T33: 0.2129 T12: 0.1558 REMARK 3 T13: 0.0725 T23: 0.0650 REMARK 3 L TENSOR REMARK 3 L11: 0.4644 L22: 1.3217 REMARK 3 L33: 1.6988 L12: -0.1075 REMARK 3 L13: 0.0478 L23: -0.6380 REMARK 3 S TENSOR REMARK 3 S11: -0.0293 S12: 0.0543 S13: 0.0657 REMARK 3 S21: -0.0618 S22: 0.0556 S23: -0.0572 REMARK 3 S31: -0.2244 S32: -0.2299 S33: 0.0090 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 603 THROUGH 713 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.2219 -16.0603 37.6798 REMARK 3 T TENSOR REMARK 3 T11: 0.5106 T22: 0.3913 REMARK 3 T33: 0.4716 T12: 0.0091 REMARK 3 T13: 0.1112 T23: 0.1865 REMARK 3 L TENSOR REMARK 3 L11: 0.5245 L22: 0.7311 REMARK 3 L33: 0.6684 L12: 0.2222 REMARK 3 L13: -0.5511 L23: 0.0928 REMARK 3 S TENSOR REMARK 3 S11: 0.0303 S12: 0.2784 S13: 0.2085 REMARK 3 S21: -0.1936 S22: -0.1750 S23: -0.4362 REMARK 3 S31: -0.6049 S32: 0.2624 S33: 0.0390 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5IF2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218741. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24630 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.600 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.59100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 MG/ML PROTEIN AGAINST MORPHEUS REMARK 280 SCREEN CONDITION H6 10% PEG 8000, 20% EG, 0.02 M EACH AMINO ACID, REMARK 280 0.1 M MOPS/HEPES PH 7.5, UNIQUE PUCK ID PYL5-1, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 264.61333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 132.30667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 198.46000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 66.15333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 330.76667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 264.61333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 132.30667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 66.15333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 198.46000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 330.76667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 -34.44500 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 -59.66049 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 66.15333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 253 REMARK 465 ASN A 254 REMARK 465 ALA A 255 REMARK 465 ARG A 256 REMARK 465 ILE A 257 REMARK 465 GLU A 258 REMARK 465 PRO A 259 REMARK 465 PHE A 260 REMARK 465 LEU A 261 REMARK 465 LYS A 262 REMARK 465 SER A 263 REMARK 465 THR A 264 REMARK 465 ASN A 373 REMARK 465 MET A 374 REMARK 465 ALA A 375 REMARK 465 PRO A 376 REMARK 465 GLU A 377 REMARK 465 LYS A 378 REMARK 465 VAL A 379 REMARK 465 ASP A 380 REMARK 465 PHE A 381 REMARK 465 ASP A 382 REMARK 465 ASP A 383 REMARK 465 CYS A 384 REMARK 465 LYS A 385 REMARK 465 ASP A 386 REMARK 465 VAL A 387 REMARK 465 GLY A 388 REMARK 465 ASP A 389 REMARK 465 LEU A 390 REMARK 465 LYS A 391 REMARK 465 GLN A 392 REMARK 465 TYR A 393 REMARK 465 ASP A 394 REMARK 465 SER A 395 REMARK 465 ASP A 396 REMARK 465 GLU A 397 REMARK 465 PRO A 398 REMARK 465 SER A 616 REMARK 465 GLU A 617 REMARK 465 THR A 618 REMARK 465 TRP A 619 REMARK 465 PRO A 620 REMARK 465 VAL A 621 REMARK 465 GLY A 622 REMARK 465 GLU A 677 REMARK 465 PRO A 678 REMARK 465 GLY A 679 REMARK 465 THR A 680 REMARK 465 PHE A 681 REMARK 465 ASP A 682 REMARK 465 LEU A 683 REMARK 465 ALA A 714 REMARK 465 LEU A 715 REMARK 465 ARG A 716 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 269 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 298 CG CD OE1 OE2 REMARK 470 TYR A 305 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 309 CG CD CE NZ REMARK 470 GLU A 327 CG CD OE1 OE2 REMARK 470 GLU A 351 CG CD OE1 OE2 REMARK 470 GLU A 352 CG CD OE1 OE2 REMARK 470 LYS A 353 CG CD CE NZ REMARK 470 GLU A 399 CG CD OE1 OE2 REMARK 470 LYS A 492 CG CD CE NZ REMARK 470 ARG A 496 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 512 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 603 CG CD CE NZ REMARK 470 GLU A 604 CG CD OE1 OE2 REMARK 470 LYS A 605 CG CD CE NZ REMARK 470 LYS A 609 CG CD CE NZ REMARK 470 LYS A 615 CG CD CE NZ REMARK 470 GLU A 623 CG CD OE1 OE2 REMARK 470 LYS A 626 CG CD CE NZ REMARK 470 LYS A 635 CG CD CE NZ REMARK 470 ARG A 663 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 673 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 676 CG CD1 CD2 REMARK 470 GLU A 688 CG CD OE1 OE2 REMARK 470 GLU A 692 CG CD OE1 OE2 REMARK 470 PHE A 710 CG CD1 CD2 CE1 CE2 CZ REMARK 470 HIS A 713 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 464 O HOH A 901 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 284 -100.64 -110.63 REMARK 500 ASP A 294 58.49 28.89 REMARK 500 SER A 296 12.27 -143.18 REMARK 500 GLU A 604 19.70 57.75 REMARK 500 ASN A 614 72.22 57.46 REMARK 500 ASN A 696 -0.74 -153.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6B1 A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 802 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IUJ RELATED DB: PDB REMARK 900 RELATED ID: 5IEQ RELATED DB: PDB REMARK 900 RELATED ID: SSGCID-INVAN.07057.A RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 5IF5 RELATED DB: PDB REMARK 900 RELATED ID: 5IF7 RELATED DB: PDB REMARK 900 RELATED ID: 5IF8 RELATED DB: PDB REMARK 900 RELATED ID: 5IFB RELATED DB: PDB REMARK 900 RELATED ID: 5IFC RELATED DB: PDB REMARK 900 RELATED ID: 5IFD RELATED DB: PDB DBREF 5IF2 A 254 716 UNP P15659 PA_I33A0 254 716 SEQADV 5IF2 GLY A 253 UNP P15659 EXPRESSION TAG SEQRES 1 A 464 GLY ASN ALA ARG ILE GLU PRO PHE LEU LYS SER THR PRO SEQRES 2 A 464 ARG PRO LEU ARG LEU PRO ASP GLY PRO PRO CYS SER GLN SEQRES 3 A 464 ARG SER LYS PHE LEU LEU MET ASP ALA LEU LYS LEU SER SEQRES 4 A 464 ILE GLU ASP PRO SER HIS GLU GLY GLU GLY ILE PRO LEU SEQRES 5 A 464 TYR ASP ALA ILE LYS CYS MET ARG THR PHE PHE GLY TRP SEQRES 6 A 464 LYS GLU PRO ASN VAL VAL LYS PRO HIS GLU LYS GLY ILE SEQRES 7 A 464 ASN PRO ASN TYR LEU LEU SER TRP LYS GLN VAL LEU ALA SEQRES 8 A 464 GLU LEU GLN ASP ILE GLU ASN GLU GLU LYS ILE PRO ARG SEQRES 9 A 464 THR LYS ASN MET LYS LYS THR SER GLN LEU LYS TRP ALA SEQRES 10 A 464 LEU GLY GLU ASN MET ALA PRO GLU LYS VAL ASP PHE ASP SEQRES 11 A 464 ASP CYS LYS ASP VAL GLY ASP LEU LYS GLN TYR ASP SER SEQRES 12 A 464 ASP GLU PRO GLU LEU ARG SER LEU ALA SER TRP ILE GLN SEQRES 13 A 464 ASN GLU PHE ASN LYS ALA CYS GLU LEU THR ASP SER SER SEQRES 14 A 464 TRP ILE GLU LEU ASP GLU ILE GLY GLU ASP ALA ALA PRO SEQRES 15 A 464 ILE GLU HIS ILE ALA SER MET ARG ARG ASN TYR PHE THR SEQRES 16 A 464 ALA GLU VAL SER HIS CYS ARG ALA THR GLU TYR ILE MET SEQRES 17 A 464 LYS GLY VAL TYR ILE ASN THR ALA LEU LEU ASN ALA SER SEQRES 18 A 464 CYS ALA ALA MET ASP ASP PHE GLN LEU ILE PRO MET ILE SEQRES 19 A 464 SER LYS CYS ARG THR LYS GLU GLY ARG ARG LYS THR ASN SEQRES 20 A 464 LEU TYR GLY PHE ILE ILE LYS GLY ARG SER HIS LEU ARG SEQRES 21 A 464 ASN ASP THR ASP VAL VAL ASN PHE VAL SER MET GLU PHE SEQRES 22 A 464 SER LEU THR ASP PRO ARG LEU GLU PRO HIS LYS TRP GLU SEQRES 23 A 464 LYS TYR CYS VAL LEU GLU VAL GLY ASP MET LEU LEU ARG SEQRES 24 A 464 SER ALA ILE GLY HIS VAL SER ARG PRO MET PHE LEU TYR SEQRES 25 A 464 VAL ARG THR ASN GLY THR SER LYS ILE LYS MET LYS TRP SEQRES 26 A 464 GLY MET GLU MET ARG ARG CYS LEU LEU GLN SER LEU GLN SEQRES 27 A 464 GLN ILE GLU SER MET ILE GLU ALA GLU SER SER VAL LYS SEQRES 28 A 464 GLU LYS ASP MET THR LYS GLU PHE PHE GLU ASN LYS SER SEQRES 29 A 464 GLU THR TRP PRO VAL GLY GLU SER PRO LYS GLY VAL GLU SEQRES 30 A 464 GLU GLY SER ILE GLY LYS VAL CYS ARG THR LEU LEU ALA SEQRES 31 A 464 LYS SER VAL PHE ASN SER LEU TYR ALA SER PRO GLN LEU SEQRES 32 A 464 GLU GLY PHE SER ALA GLU SER ARG LYS LEU LEU LEU ILE SEQRES 33 A 464 VAL GLN ALA LEU ARG ASP ASN LEU GLU PRO GLY THR PHE SEQRES 34 A 464 ASP LEU GLY GLY LEU TYR GLU ALA ILE GLU GLU CYS LEU SEQRES 35 A 464 ILE ASN ASP PRO TRP VAL LEU LEU ASN ALA SER TRP PHE SEQRES 36 A 464 ASN SER PHE LEU THR HIS ALA LEU ARG HET 6B1 A 801 13 HET DMS A 802 4 HET CL A 803 1 HETNAM 6B1 (5,6-DICHLORO-1H-BENZIMIDAZOL-2-YL)METHANOL HETNAM DMS DIMETHYL SULFOXIDE HETNAM CL CHLORIDE ION FORMUL 2 6B1 C8 H6 CL2 N2 O FORMUL 3 DMS C2 H6 O S FORMUL 4 CL CL 1- FORMUL 5 HOH *129(H2 O) HELIX 1 AA1 ILE A 302 THR A 313 1 12 HELIX 2 AA2 ILE A 330 GLU A 351 1 22 HELIX 3 AA3 THR A 363 LEU A 370 1 8 HELIX 4 AA4 SER A 405 GLU A 416 1 12 HELIX 5 AA5 GLU A 436 SER A 451 1 16 HELIX 6 AA6 CYS A 453 ALA A 476 1 24 HELIX 7 AA7 ASP A 529 GLU A 538 5 10 HELIX 8 AA8 LYS A 572 GLU A 580 1 9 HELIX 9 AA9 ARG A 582 LYS A 603 1 22 HELIX 10 AB1 MET A 607 ASN A 614 1 8 HELIX 11 AB2 SER A 632 TYR A 650 1 19 HELIX 12 AB3 SER A 652 LEU A 676 1 25 HELIX 13 AB4 GLY A 685 GLU A 692 1 8 HELIX 14 AB5 ASP A 697 HIS A 713 1 17 SHEET 1 AA1 4 LEU A 290 GLU A 293 0 SHEET 2 AA1 4 ARG A 496 LYS A 506 -1 O LEU A 500 N LEU A 290 SHEET 3 AA1 4 PHE A 480 THR A 491 -1 N ILE A 483 O ILE A 504 SHEET 4 AA1 4 LYS A 358 MET A 360 -1 N MET A 360 O PHE A 480 SHEET 1 AA2 7 TRP A 317 LYS A 324 0 SHEET 2 AA2 7 CYS A 541 LEU A 550 -1 O VAL A 542 N LYS A 324 SHEET 3 AA2 7 VAL A 557 SER A 571 -1 O ARG A 559 N MET A 548 SHEET 4 AA2 7 VAL A 517 SER A 526 -1 N SER A 526 O PHE A 562 SHEET 5 AA2 7 ARG A 496 LYS A 506 -1 N PHE A 503 O MET A 523 SHEET 6 AA2 7 PHE A 480 THR A 491 -1 N ILE A 483 O ILE A 504 SHEET 7 AA2 7 SER A 420 SER A 421 -1 N SER A 421 O ARG A 490 SITE 1 AC1 6 MET A 311 TRP A 317 LEU A 342 ALA A 343 SITE 2 AC1 6 GLN A 346 HOH A 949 SITE 1 AC2 8 LYS A 281 ILE A 465 ASN A 466 LEU A 469 SITE 2 AC2 8 PHE A 520 THR A 570 HOH A 910 HOH A 984 CRYST1 68.890 68.890 396.920 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014516 0.008381 0.000000 0.00000 SCALE2 0.000000 0.016762 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002519 0.00000