HEADER APOPTOSIS/APOPTOSIS INHIBITOR 25-FEB-16 5IF4 TITLE DISCOVERY OF POTENT MYELOID CELL LEUKEMIA-1 (MCL-1) INHIBITORS USING TITLE 2 STRUCTURE-BASED DESIGN COMPND MOL_ID: 1; COMPND 2 MOLECULE: INDUCED MYELOID LEUKEMIA CELL DIFFERENTIATION PROTEIN MCL- COMPND 3 1; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: UNP RESIDUES 172-327; COMPND 6 SYNONYM: BCL-2-LIKE PROTEIN 3,BCL2-L-3,BCL-2-RELATED PROTEIN COMPND 7 EAT/MCL1,MCL1/EAT; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MCL1, BCL2L3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333 KEYWDS MYELOID CELL LEUKEMIA-1, BCL-2, APOPTOSIS, APOPTOSIS-APOPTOSIS KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR B.ZHAO REVDAT 5 06-MAR-24 5IF4 1 REMARK REVDAT 4 04-DEC-19 5IF4 1 REMARK REVDAT 3 20-SEP-17 5IF4 1 REMARK REVDAT 2 25-JAN-17 5IF4 1 JRNL REVDAT 1 18-JAN-17 5IF4 0 JRNL AUTH T.LEE,Z.BIAN,B.ZHAO,L.J.HOGDAL,J.L.SENSINTAFFAR,C.M.GOODWIN, JRNL AUTH 2 J.BELMAR,S.SHAW,J.C.TARR,N.VEERASAMY,S.M.MATULIS,B.KOSS, JRNL AUTH 3 M.A.FISCHER,A.L.ARNOLD,D.V.CAMPER,C.F.BROWNING, JRNL AUTH 4 O.W.ROSSANESE,A.BUDHRAJA,J.OPFERMAN,L.H.BOISE,M.R.SAVONA, JRNL AUTH 5 A.LETAI,E.T.OLEJNICZAK,S.W.FESIK JRNL TITL DISCOVERY AND BIOLOGICAL CHARACTERIZATION OF POTENT MYELOID JRNL TITL 2 CELL LEUKEMIA-1 INHIBITORS. JRNL REF FEBS LETT. V. 591 240 2017 JRNL REFN ISSN 1873-3468 JRNL PMID 27878989 JRNL DOI 10.1002/1873-3468.12497 REMARK 2 REMARK 2 RESOLUTION. 2.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.450 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 13642 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1365 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.3076 - 5.1453 0.99 1311 147 0.1430 0.1821 REMARK 3 2 5.1453 - 4.0875 0.97 1284 142 0.1291 0.1791 REMARK 3 3 4.0875 - 3.5718 0.98 1267 141 0.1363 0.1877 REMARK 3 4 3.5718 - 3.2457 0.97 1277 142 0.1577 0.2254 REMARK 3 5 3.2457 - 3.0133 0.95 1228 136 0.1601 0.2358 REMARK 3 6 3.0133 - 2.8358 0.94 1216 135 0.1758 0.2437 REMARK 3 7 2.8358 - 2.6939 0.92 1205 134 0.1808 0.2752 REMARK 3 8 2.6939 - 2.5767 0.92 1188 132 0.1885 0.2568 REMARK 3 9 2.5767 - 2.4776 0.89 1162 130 0.1927 0.2938 REMARK 3 10 2.4776 - 2.3921 0.87 1139 126 0.2074 0.2928 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2577 REMARK 3 ANGLE : 1.070 3489 REMARK 3 CHIRALITY : 0.056 375 REMARK 3 PLANARITY : 0.009 437 REMARK 3 DIHEDRAL : 18.040 1495 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 202 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0008 5.2744 2.6541 REMARK 3 T TENSOR REMARK 3 T11: 0.3502 T22: 0.2887 REMARK 3 T33: 0.2633 T12: -0.0246 REMARK 3 T13: 0.0100 T23: 0.0308 REMARK 3 L TENSOR REMARK 3 L11: 0.4376 L22: 3.9983 REMARK 3 L33: 3.5504 L12: 1.3702 REMARK 3 L13: -0.7016 L23: -1.7950 REMARK 3 S TENSOR REMARK 3 S11: 0.0470 S12: 0.3547 S13: 0.3006 REMARK 3 S21: -0.1902 S22: 0.1995 S23: -0.0530 REMARK 3 S31: -0.4984 S32: -0.1422 S33: -0.1189 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 203 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.9670 -2.5075 13.8499 REMARK 3 T TENSOR REMARK 3 T11: 0.1752 T22: 0.3921 REMARK 3 T33: 0.1860 T12: -0.0120 REMARK 3 T13: 0.0139 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 2.8729 L22: 8.7201 REMARK 3 L33: 4.1514 L12: -0.2881 REMARK 3 L13: -0.9722 L23: -0.6035 REMARK 3 S TENSOR REMARK 3 S11: 0.0211 S12: -0.3213 S13: 0.1263 REMARK 3 S21: -0.0351 S22: 0.0247 S23: -0.8206 REMARK 3 S31: -0.1144 S32: 0.5933 S33: 0.0461 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 236 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.8116 -16.0227 1.8682 REMARK 3 T TENSOR REMARK 3 T11: 0.6016 T22: 0.4065 REMARK 3 T33: 0.3542 T12: 0.0482 REMARK 3 T13: -0.0017 T23: -0.0830 REMARK 3 L TENSOR REMARK 3 L11: 7.3623 L22: 4.4776 REMARK 3 L33: 7.1239 L12: -1.8871 REMARK 3 L13: -0.5177 L23: 0.3847 REMARK 3 S TENSOR REMARK 3 S11: -0.0073 S12: 0.7807 S13: -0.8724 REMARK 3 S21: -1.1183 S22: -0.6329 S23: 0.6325 REMARK 3 S31: 0.7629 S32: -0.0353 S33: 0.1992 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 247 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3354 -6.8508 11.8902 REMARK 3 T TENSOR REMARK 3 T11: 0.2035 T22: 0.1819 REMARK 3 T33: 0.1790 T12: -0.0494 REMARK 3 T13: -0.0141 T23: 0.0420 REMARK 3 L TENSOR REMARK 3 L11: 1.6366 L22: 4.1945 REMARK 3 L33: 2.1031 L12: -0.8695 REMARK 3 L13: 0.1038 L23: 0.9705 REMARK 3 S TENSOR REMARK 3 S11: -0.0532 S12: 0.0317 S13: -0.0200 REMARK 3 S21: 0.2826 S22: -0.0035 S23: 0.1530 REMARK 3 S31: 0.5008 S32: -0.1149 S33: -0.0198 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 284 THROUGH 308 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3747 -0.3795 7.7377 REMARK 3 T TENSOR REMARK 3 T11: 0.1693 T22: 0.3456 REMARK 3 T33: 0.2462 T12: 0.0036 REMARK 3 T13: -0.0478 T23: 0.0560 REMARK 3 L TENSOR REMARK 3 L11: 2.8811 L22: 6.3104 REMARK 3 L33: 4.3917 L12: -1.6546 REMARK 3 L13: -0.2360 L23: 2.5464 REMARK 3 S TENSOR REMARK 3 S11: 0.3114 S12: 0.6029 S13: -0.0799 REMARK 3 S21: -0.3071 S22: -0.6006 S23: 0.6293 REMARK 3 S31: -0.2409 S32: -1.1741 S33: 0.2678 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 309 THROUGH 322 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.4415 12.0117 17.6314 REMARK 3 T TENSOR REMARK 3 T11: 0.4805 T22: 0.2618 REMARK 3 T33: 0.3694 T12: -0.0798 REMARK 3 T13: 0.0970 T23: -0.0474 REMARK 3 L TENSOR REMARK 3 L11: 4.5920 L22: 5.3520 REMARK 3 L33: 9.0397 L12: 3.0185 REMARK 3 L13: 6.1906 L23: 3.5759 REMARK 3 S TENSOR REMARK 3 S11: 0.0001 S12: 0.0511 S13: 0.9342 REMARK 3 S21: 0.2483 S22: -0.1305 S23: 0.0432 REMARK 3 S31: -1.0514 S32: 0.2065 S33: 0.3067 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 171 THROUGH 202 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8332 -38.9739 11.0637 REMARK 3 T TENSOR REMARK 3 T11: 0.3198 T22: 0.3456 REMARK 3 T33: 0.4560 T12: -0.0303 REMARK 3 T13: -0.0551 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 4.0735 L22: 3.0341 REMARK 3 L33: 2.6659 L12: -0.3763 REMARK 3 L13: 0.8250 L23: -0.9319 REMARK 3 S TENSOR REMARK 3 S11: 0.2307 S12: 0.3352 S13: -1.1092 REMARK 3 S21: -0.4650 S22: -0.0857 S23: 0.9667 REMARK 3 S31: 0.5645 S32: -0.4337 S33: -0.1666 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 203 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.6257 -27.8133 20.7397 REMARK 3 T TENSOR REMARK 3 T11: 0.2270 T22: 0.3783 REMARK 3 T33: 0.2600 T12: 0.0386 REMARK 3 T13: 0.0057 T23: 0.0523 REMARK 3 L TENSOR REMARK 3 L11: 3.3071 L22: 2.3368 REMARK 3 L33: 4.6491 L12: -0.3408 REMARK 3 L13: 0.0611 L23: -0.7785 REMARK 3 S TENSOR REMARK 3 S11: -0.1233 S12: -0.3699 S13: -0.0970 REMARK 3 S21: 0.7265 S22: 0.1555 S23: 0.6088 REMARK 3 S31: -0.1465 S32: -0.4984 S33: -0.0678 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 236 THROUGH 254 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3739 -19.5843 8.3291 REMARK 3 T TENSOR REMARK 3 T11: 0.3133 T22: 0.1865 REMARK 3 T33: 0.3039 T12: -0.0249 REMARK 3 T13: 0.0155 T23: 0.0255 REMARK 3 L TENSOR REMARK 3 L11: 8.6626 L22: 3.6310 REMARK 3 L33: 9.3840 L12: -0.5388 REMARK 3 L13: 4.5275 L23: -2.6536 REMARK 3 S TENSOR REMARK 3 S11: -0.4348 S12: 0.5681 S13: -0.0400 REMARK 3 S21: -0.3896 S22: -0.0267 S23: -0.2491 REMARK 3 S31: -0.4922 S32: 0.4008 S33: 0.2346 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 255 THROUGH 308 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7430 -28.3361 14.5042 REMARK 3 T TENSOR REMARK 3 T11: 0.1237 T22: 0.0880 REMARK 3 T33: 0.2178 T12: -0.0358 REMARK 3 T13: -0.0035 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 4.4708 L22: 4.2164 REMARK 3 L33: 5.1770 L12: -3.2595 REMARK 3 L13: 2.0479 L23: -2.9320 REMARK 3 S TENSOR REMARK 3 S11: 0.1860 S12: 0.1928 S13: -0.1187 REMARK 3 S21: -0.1312 S22: -0.1265 S23: 0.1001 REMARK 3 S31: 0.0349 S32: 0.1235 S33: 0.0133 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 309 THROUGH 324 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.0943 -41.7854 25.7553 REMARK 3 T TENSOR REMARK 3 T11: 0.3150 T22: 0.3280 REMARK 3 T33: 0.4051 T12: -0.0765 REMARK 3 T13: 0.0184 T23: 0.0845 REMARK 3 L TENSOR REMARK 3 L11: 6.6558 L22: 0.2454 REMARK 3 L33: 1.5303 L12: 0.3665 REMARK 3 L13: 3.0690 L23: 0.3330 REMARK 3 S TENSOR REMARK 3 S11: -0.1087 S12: -0.3275 S13: -1.2097 REMARK 3 S21: 0.0818 S22: 0.0910 S23: 0.4290 REMARK 3 S31: 0.9639 S32: -0.7761 S33: 0.1827 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5IF4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218731. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9787 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13659 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.392 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : 0.10500 REMARK 200 FOR THE DATA SET : 14.5500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.21500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.490 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, BIS-TRIS, MAGNESIUM REMARK 280 CHLORIDE, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.92100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 169 REMARK 465 ALA A 170 REMARK 465 ASP A 171 REMARK 465 ASP A 323 REMARK 465 LEU A 324 REMARK 465 GLU A 325 REMARK 465 GLY A 326 REMARK 465 GLY A 327 REMARK 465 GLY B 169 REMARK 465 ALA B 170 REMARK 465 GLU B 325 REMARK 465 GLY B 326 REMARK 465 GLY B 327 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 201 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 222 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 244 CG CD CE NZ REMARK 470 ASP A 256 CG OD1 OD2 REMARK 470 GLU A 322 CG CD OE1 OE2 REMARK 470 GLU B 322 CG CD OE1 OE2 REMARK 470 ASP B 323 CG OD1 OD2 REMARK 470 LEU B 324 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 518 O HOH B 550 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 236 71.16 41.59 REMARK 500 ASP B 236 71.14 41.02 REMARK 500 ASN B 239 -174.48 -170.67 REMARK 500 ASP B 323 -150.91 -113.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6AK A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6AK B 400 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5IEZ RELATED DB: PDB DBREF 5IF4 A 172 327 UNP Q07820 MCL1_HUMAN 172 327 DBREF 5IF4 B 172 327 UNP Q07820 MCL1_HUMAN 172 327 SEQADV 5IF4 GLY A 169 UNP Q07820 EXPRESSION TAG SEQADV 5IF4 ALA A 170 UNP Q07820 EXPRESSION TAG SEQADV 5IF4 ASP A 171 UNP Q07820 EXPRESSION TAG SEQADV 5IF4 GLY B 169 UNP Q07820 EXPRESSION TAG SEQADV 5IF4 ALA B 170 UNP Q07820 EXPRESSION TAG SEQADV 5IF4 ASP B 171 UNP Q07820 EXPRESSION TAG SEQRES 1 A 159 GLY ALA ASP ASP GLU LEU TYR ARG GLN SER LEU GLU ILE SEQRES 2 A 159 ILE SER ARG TYR LEU ARG GLU GLN ALA THR GLY ALA LYS SEQRES 3 A 159 ASP THR LYS PRO MET GLY ARG SER GLY ALA THR SER ARG SEQRES 4 A 159 LYS ALA LEU GLU THR LEU ARG ARG VAL GLY ASP GLY VAL SEQRES 5 A 159 GLN ARG ASN HIS GLU THR ALA PHE GLN GLY MET LEU ARG SEQRES 6 A 159 LYS LEU ASP ILE LYS ASN GLU ASP ASP VAL LYS SER LEU SEQRES 7 A 159 SER ARG VAL MET ILE HIS VAL PHE SER ASP GLY VAL THR SEQRES 8 A 159 ASN TRP GLY ARG ILE VAL THR LEU ILE SER PHE GLY ALA SEQRES 9 A 159 PHE VAL ALA LYS HIS LEU LYS THR ILE ASN GLN GLU SER SEQRES 10 A 159 CYS ILE GLU PRO LEU ALA GLU SER ILE THR ASP VAL LEU SEQRES 11 A 159 VAL ARG THR LYS ARG ASP TRP LEU VAL LYS GLN ARG GLY SEQRES 12 A 159 TRP ASP GLY PHE VAL GLU PHE PHE HIS VAL GLU ASP LEU SEQRES 13 A 159 GLU GLY GLY SEQRES 1 B 159 GLY ALA ASP ASP GLU LEU TYR ARG GLN SER LEU GLU ILE SEQRES 2 B 159 ILE SER ARG TYR LEU ARG GLU GLN ALA THR GLY ALA LYS SEQRES 3 B 159 ASP THR LYS PRO MET GLY ARG SER GLY ALA THR SER ARG SEQRES 4 B 159 LYS ALA LEU GLU THR LEU ARG ARG VAL GLY ASP GLY VAL SEQRES 5 B 159 GLN ARG ASN HIS GLU THR ALA PHE GLN GLY MET LEU ARG SEQRES 6 B 159 LYS LEU ASP ILE LYS ASN GLU ASP ASP VAL LYS SER LEU SEQRES 7 B 159 SER ARG VAL MET ILE HIS VAL PHE SER ASP GLY VAL THR SEQRES 8 B 159 ASN TRP GLY ARG ILE VAL THR LEU ILE SER PHE GLY ALA SEQRES 9 B 159 PHE VAL ALA LYS HIS LEU LYS THR ILE ASN GLN GLU SER SEQRES 10 B 159 CYS ILE GLU PRO LEU ALA GLU SER ILE THR ASP VAL LEU SEQRES 11 B 159 VAL ARG THR LYS ARG ASP TRP LEU VAL LYS GLN ARG GLY SEQRES 12 B 159 TRP ASP GLY PHE VAL GLU PHE PHE HIS VAL GLU ASP LEU SEQRES 13 B 159 GLU GLY GLY HET 6AK A 400 50 HET 6AK B 400 50 HETNAM 6AK 4-{8-CHLORO-11-[3-(4-CHLORO-3,5-DIMETHYLPHENOXY) HETNAM 2 6AK PROPYL]-1-OXO-7-(1,3,5-TRIMETHYL-1H-PYRAZOL-4-YL)-4,5- HETNAM 3 6AK DIHYDRO-1H-[1,4]DIAZEPINO[1,2-A]INDOL-2(3H)-YL}-1- HETNAM 4 6AK METHYL-1H-INDOLE-6-CARBOXYLIC ACID FORMUL 3 6AK 2(C39 H39 CL2 N5 O4) FORMUL 5 HOH *114(H2 O) HELIX 1 AA1 ASP A 172 GLY A 192 1 21 HELIX 2 AA2 SER A 202 HIS A 224 1 23 HELIX 3 AA3 HIS A 224 ASP A 236 1 13 HELIX 4 AA4 ASN A 239 SER A 245 1 7 HELIX 5 AA5 LEU A 246 ASP A 256 1 11 HELIX 6 AA6 ASN A 260 ILE A 281 1 22 HELIX 7 AA7 GLN A 283 SER A 285 5 3 HELIX 8 AA8 CYS A 286 GLN A 309 1 24 HELIX 9 AA9 ARG A 310 HIS A 320 1 11 HELIX 10 AB1 ASP B 172 GLY B 192 1 21 HELIX 11 AB2 SER B 202 HIS B 224 1 23 HELIX 12 AB3 HIS B 224 ASP B 236 1 13 HELIX 13 AB4 ASN B 239 SER B 245 1 7 HELIX 14 AB5 LEU B 246 ASP B 256 1 11 HELIX 15 AB6 ASN B 260 ILE B 281 1 22 HELIX 16 AB7 GLN B 283 SER B 285 5 3 HELIX 17 AB8 CYS B 286 GLN B 309 1 24 HELIX 18 AB9 ARG B 310 HIS B 320 1 11 SITE 1 AC1 16 HIS A 224 ALA A 227 PHE A 228 MET A 231 SITE 2 AC1 16 VAL A 249 MET A 250 VAL A 253 ASN A 260 SITE 3 AC1 16 ARG A 263 LEU A 267 PHE A 270 GLY A 271 SITE 4 AC1 16 ILE A 294 HOH A 540 HOH A 549 HIS B 252 SITE 1 AC2 16 HIS B 224 ALA B 227 PHE B 228 MET B 231 SITE 2 AC2 16 MET B 250 VAL B 253 PHE B 254 ASP B 256 SITE 3 AC2 16 GLY B 257 VAL B 258 ASN B 260 ARG B 263 SITE 4 AC2 16 THR B 266 LEU B 267 PHE B 270 GLY B 271 CRYST1 39.748 87.842 54.072 90.00 99.68 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025158 0.000000 0.004292 0.00000 SCALE2 0.000000 0.011384 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018761 0.00000